Trimin1|129928|gw1.5.12.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|129928
Unique Name	Trimin1\|129928\|gw1.5.12.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	179

Homology

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BLAST of jgi.p|Trimin1|129928 vs. uniprot
Match: A0A835YYZ0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYZ0_9STRA)

HSP 1 Score: 352 bits (902), Expect = 1.410e-122
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0

Query:    1 IDLSHSAVAKVEYLRALLEGGFSPLPRDESGRLILPPDLKADLLKPILAFASATDKPMYLLTKLPTSANVTGLLHCYDFAYGVGLAVADLDDIHSRLTDVKDTTERLARKTYEHHSNRDGRCAARNAAAELCLGLAADVFDVQDRRTQQKIYSRVLFILSHSATFHRRISHHVLTVARR 179
            IDLSHSAVAKVEYLRALLEGGFSPLPRDESGRLILPPDLKADLLKPILAFASATDKPMYLLTKLPTSANVTGLLHCYDFAYGVGLAVADLDDIHSRLTDVKDTTERLARKTYEHHSNRDGRCAARNAAAELCLGLAADVFDVQDRRTQQKIYSRVLFILSHSATFHRRISHHVLTVARR
Sbjct:    1 IDLSHSAVAKVEYLRALLEGGFSPLPRDESGRLILPPDLKADLLKPILAFASATDKPMYLLTKLPTSANVTGLLHCYDFAYGVGLAVADLDDIHSRLTDVKDTTERLARKTYEHHSNRDGRCAARNAAAELCLGLAADVFDVQDRRTQQKIYSRVLFILSHSATFHRRISHHVLTVARR 179

[Close]

BLAST of jgi.p|Trimin1|129928 vs. uniprot
Match: A0A7S1W5K9_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1W5K9_ALECA)

HSP 1 Score: 87.0 bits (214), Expect = 9.090e-18
Identity = 61/170 (35.88%), Postives = 95/170 (55.88%), Query Frame = 0

Query:    9 AKVEYLRALLEGGFSPLPRDESGRLILPPDLKADLLKPILAFASATDKPMYLLTKLPTSANVTGLLHCYDFAYGVGLAVADLDD--IHSRLTDVKDTTERLARKTYEHHSNRDGRCAARNAAAELCLGLAADVFDVQDRRTQQKIYSRVLFILSHSATFHRRISHHVLTV 176
            AKV +L +LL        ++E G  ++  D    L++ +L F S+ D  M+L TKLP +++   +L   DF      AV  + D    + L DVKD  +R+ ++     S    R  ARNAAAEL +GL +  +D+ + R +Q++Y+ VLF++SHS TF  R+ HH+L V
Sbjct:   43 AKVPFLDSLLADRIGTK-KNEHGEPVI--DRDPALVRAVLEFVSSGDA-MHLFTKLPKASSAKDMLVELDFFCVEPPAVRPISDKSFKTSLKDVKDEYQRVCKRGPIEKSYSANRFGARNAAAELAVGLESATYDLTNHRIRQELYNSVLFVISHSRTFGPRMRHHILGV 208

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|129928 vs. uniprot

BLAST of jgi.p|Trimin1|129928 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YYZ0_9STRA	1.410e-122	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A7S1W5K9_ALECA	9.090e-18	35.88	Hypothetical protein n=1 Tax=Alexandrium catenella...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_5	contig	Contig_5:390800..391336 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|129928	mRNA_2287	Tribonema minus UTEX_B_3156	mRNA	Contig_5 390800..391336 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|129928|gw1.5.12.1 ID=Trimin1|129928|gw1.5.12.1|Name=jgi.p|Trimin1|129928|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=179bp
IDLSHSAVAKVEYLRALLEGGFSPLPRDESGRLILPPDLKADLLKPILAF
ASATDKPMYLLTKLPTSANVTGLLHCYDFAYGVGLAVADLDDIHSRLTDV
KDTTERLARKTYEHHSNRDGRCAARNAAAELCLGLAADVFDVQDRRTQQK
IYSRVLFILSHSATFHRRISHHVLTVARR