Trimin1|129674|gw1.156.5.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|129674
Unique NameTrimin1|129674|gw1.156.5.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length230
Homology
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BLAST of jgi.p|Trimin1|129674 vs. uniprot
Match: A0A836CMF9_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMF9_9STRA)

HSP 1 Score: 180 bits (456), Expect = 3.330e-53
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 
Query:    1 GWLPLHMAAEAGDLAAVRAAVTDEGVYIDEKTRDKAKCSALWLAAQGGKLAVVQFLVDEGSALDLMNASGQTPLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPLYLAAACGSAGAARKLAHKGAALEXXXXXXXXXXXXXXXXXHDRVVALLLRKGVLP 230
            GWLPLHMAAEAGDLAAVRAAVTDEGVYIDEKTRDKAKCSALWLAAQGGKLAVVQFLVDEGSALDLMNASGQTPLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPLYLAAACGSAGAARKLAHKGAALEXXXXXXXXXXXXXXXXXHDRVVALLLRKGVLP
Sbjct:    1 GWLPLHMAAEAGDLAAVRAAVTDEGVYIDEKTRDKAKCSALWLAAQGGKLAVVQFLVDEGSALDLMNASGQTPLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPLYLAAACGSAGAARKLAHKGAALEXXXXXXXXXXXXXXXXXHDRVVALLLRKGVLP 230
[Close]
BLAST of jgi.p|Trimin1|129674 vs. uniprot
Match: A0A835ZJE4_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJE4_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 5.500e-7
Identity = 27/37 (72.97%), Postives = 33/37 (89.19%), Query Frame = 0 
Query:   39 SALWLAAQGGKLAVVQFLVDEGSALDLMNASGQTPLY 75
            +ALWLAAQ G++ VVQ+LVDEGSAL+L N+ GQTPLY
Sbjct:    1 TALWLAAQAGRVPVVQYLVDEGSALELPNSLGQTPLY 37
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|129674 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CMF9_9STRA3.330e-53100.00Ankyrin repeat-containing domain protein (Fragment... [more]
A0A835ZJE4_9STRA5.500e-772.97Ankyrin repeat-containing domain protein (Fragment... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 135..164
e-value: 410.0
score: 7.9
coord: 69..98
e-value: 0.0067
score: 25.6
coord: 170..199
e-value: 0.49
score: 19.4
coord: 203..229
e-value: 160.0
score: 10.9
coord: 36..65
e-value: 1.4
score: 17.9
coord: 102..131
e-value: 0.2
score: 20.8
coord: 1..30
e-value: 2800.0
score: 1.6
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 41..133
e-value: 9.3E-15
score: 55.0
coord: 141..227
e-value: 9.0E-11
score: 42.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 69..101
score: 10.95327
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 170..202
score: 9.190411
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 102..134
score: 9.85816
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 203..230
score: 9.965
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..84
e-value: 1.0E-18
score: 69.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 85..230
e-value: 1.8E-32
score: 114.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..228
NoneNo IPR availablePANTHERPTHR24173FAMILY NOT NAMEDcoord: 93..227
NoneNo IPR availablePANTHERPTHR24173:SF33ANKYRIN REPEAT AND SOCS BOX PROTEIN 2coord: 93..227
NoneNo IPR availablePANTHERPTHR24173FAMILY NOT NAMEDcoord: 1..156
NoneNo IPR availablePANTHERPTHR24173:SF33ANKYRIN REPEAT AND SOCS BOX PROTEIN 2coord: 1..156
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 170..199
score: 8.74663
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 69..97
score: 10.418106
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 102..134
score: 8.507847
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 203..230
score: 9.940542

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_156contigContig_156:105162..105851 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|129674mRNA_14797Tribonema minus UTEX_B_3156 mRNAContig_156 105162..105851 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|129674|gw1.156.5.1 ID=Trimin1|129674|gw1.156.5.1|Name=jgi.p|Trimin1|129674|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=230bp
GWLPLHMAAEAGDLAAVRAAVTDEGVYIDEKTRDKAKCSALWLAAQGGKL
AVVQFLVDEGSALDLMNASGQTPLYAACAGGKAEMTKLLVSLGAGVDKPA
KDGTTPLFAAVASGNLAAVEVMLDNAPRLDVKTKDGCGLLSAAARSGAEE
VMDALLVFKSKLDLDQRDNEGRTPLYLAAACGSAGAARKLAHKGAALEAA
ALDGTTPLWAAAHAGHDRVVALLLRKGVLP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf