Trimin1|129470|gw1.116.1.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|129470
Unique NameTrimin1|129470|gw1.116.1.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length52
Homology
BLAST of jgi.p|Trimin1|129470 vs. uniprot
Match: A0A835ZE41_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE41_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.790e-29
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
Query:    1 RASSLTLADLERYYSHPLAEASRELGLSATMLKKVCRSFGIKRWPHRQLASI 52
            RASSLTLADLERYYSHPLAEASRELGLSATMLKKVCRSFGIKRWPHRQLASI
Sbjct:    1 RASSLTLADLERYYSHPLAEASRELGLSATMLKKVCRSFGIKRWPHRQLASI 52          
BLAST of jgi.p|Trimin1|129470 vs. uniprot
Match: A0A836CH06_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH06_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.840e-17
Identity = 34/51 (66.67%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    2 ASSLTLADLERYYSHPLAEASRELGLSATMLKKVCRSFGIKRWPHRQLASI 52
            +  +TL  +ERYY+ PLA+A+R LGLSATMLKKVCRS G++ WP+RQLASI
Sbjct:   25 SKDITLPQVERYYNQPLAQAARGLGLSATMLKKVCRSLGVRNWPYRQLASI 75          
BLAST of jgi.p|Trimin1|129470 vs. uniprot
Match: A0A835YTG3_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG3_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.280e-13
Identity = 31/51 (60.78%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    2 ASSLTLADLERYYSHPLAEASRELGLSATMLKKVCRSFGIKRWPHRQLASI 52
            A  +TL  L+ YY+ PLAE ++ELGLS T+LKK+CR FGI+RWPHRQ+ S+
Sbjct:    8 ADQITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSL 58          
BLAST of jgi.p|Trimin1|129470 vs. uniprot
Match: H6WBB7_VAULI (Putative NIN-like transcription factor n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB7_VAULI)

HSP 1 Score: 70.9 bits (172), Expect = 4.170e-13
Identity = 31/48 (64.58%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    5 LTLADLERYYSHPLAEASRELGLSATMLKKVCRSFGIKRWPHRQLASI 52
            +TL  L+ YY+ PLAE ++ELGLS T+LKK+CR FGI+RWPHRQ+ SI
Sbjct:   14 ITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSI 61          
BLAST of jgi.p|Trimin1|129470 vs. uniprot
Match: A0A835Z1M5_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1M5_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 8.480e-13
Identity = 30/51 (58.82%), Postives = 42/51 (82.35%), Query Frame = 0
Query:    2 ASSLTLADLERYYSHPLAEASRELGLSATMLKKVCRSFGIKRWPHRQLASI 52
            A ++TL  L+ +Y+ PLAE ++ELGLS T+LKK+CR +GI+RWPHRQ+ SI
Sbjct:   11 ADNITLELLQSFYNVPLAELAKELGLSLTLLKKICRKYGIQRWPHRQIRSI 61          
BLAST of jgi.p|Trimin1|129470 vs. uniprot
Match: D8R0I0_SELML (RWP-RK domain-containing protein (Fragment) n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R0I0_SELML)

HSP 1 Score: 63.5 bits (153), Expect = 3.720e-12
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    1 RASSLTLADLERYYSHPLAEASRELGLSATMLKKVCRSFGIKRWPHRQLASI 52
            R   ++L DL RY++ P+ +AS+EL +  T+LKK CR FGI RWPHR+L S+
Sbjct:   12 RMMDISLEDLSRYFTMPITQASKELKVGLTVLKKRCREFGIPRWPHRKLKSL 63          
BLAST of jgi.p|Trimin1|129470 vs. uniprot
Match: D8RII7_SELML (RWP-RK domain-containing protein (Fragment) n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RII7_SELML)

HSP 1 Score: 62.8 bits (151), Expect = 5.880e-12
Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 RASSLTLADLERYYSHPLAEASRELGLSATMLKKVCRSFGIKRWPHRQLASI 52
            R   ++L DL RY++ P+ +AS EL +  T+LKK CR FGI RWPHR+L S+
Sbjct:    2 RMMDISLEDLSRYFTMPITQASNELKVGLTVLKKWCREFGIPRWPHRKLKSL 53          
BLAST of jgi.p|Trimin1|129470 vs. uniprot
Match: A0A835Z7T4_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T4_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 6.120e-12
Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    2 ASSLTLADLERYYSHPLAEASRELGLSATMLKKVCRSFGIKRWPHRQLASI 52
            A  L ++ LE +Y  PL  A+REL +S TMLKK+CR +GIKRWPHRQ++S+
Sbjct:   10 AKRLPVSVLEEFYHVPLNIAARELSVSLTMLKKLCRQYGIKRWPHRQVSSL 60          
BLAST of jgi.p|Trimin1|129470 vs. uniprot
Match: A0A061G426_THECC (RWP-RK domain-containing protein n=4 Tax=Byttnerioideae TaxID=214909 RepID=A0A061G426_THECC)

HSP 1 Score: 67.0 bits (162), Expect = 1.050e-11
Identity = 27/52 (51.92%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    1 RASSLTLADLERYYSHPLAEASRELGLSATMLKKVCRSFGIKRWPHRQLASI 52
            R  +LTL D+E+Y+  P+ EA+R L LS T+LKK+CR +G+ RWPHR++ S+
Sbjct:  268 RTRNLTLKDIEKYFHLPIEEAARRLDLSVTVLKKICRKYGVLRWPHRKIQSM 319          
BLAST of jgi.p|Trimin1|129470 vs. uniprot
Match: D8LJT6_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT6_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 1.170e-11
Identity = 25/48 (52.08%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    5 LTLADLERYYSHPLAEASRELGLSATMLKKVCRSFGIKRWPHRQLASI 52
            +TL DLERY+ +P+ E S+ +G+S T++K++CR +GIKRWP+RQ+ S+
Sbjct:  106 VTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSV 153          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|129470 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZE41_9STRA2.790e-29100.00RWP-RK domain-containing protein (Fragment) n=1 Ta... [more]
A0A836CH06_9STRA2.840e-1766.67RWP-RK domain-containing protein (Fragment) n=1 Ta... [more]
A0A835YTG3_9STRA2.280e-1360.78Putative NIN-like transcription factor n=1 Tax=Tri... [more]
H6WBB7_VAULI4.170e-1364.58Putative NIN-like transcription factor n=1 Tax=Vau... [more]
A0A835Z1M5_9STRA8.480e-1358.82Putative NIN-like transcription factor n=1 Tax=Tri... [more]
D8R0I0_SELML3.720e-1251.92RWP-RK domain-containing protein (Fragment) n=3 Ta... [more]
D8RII7_SELML5.880e-1251.92RWP-RK domain-containing protein (Fragment) n=5 Ta... [more]
A0A835Z7T4_9STRA6.120e-1256.86RWP-RK domain-containing protein (Fragment) n=1 Ta... [more]
A0A061G426_THECC1.050e-1151.92RWP-RK domain-containing protein n=4 Tax=Byttnerio... [more]
D8LJT6_ECTSI1.170e-1152.08Putative NIN-like transcription factor n=1 Tax=Ect... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 4..52
e-value: 1.9E-20
score: 72.6
IPR003035RWP-RK domainPROSITEPS51519RWP_RKcoord: 1..52
score: 17.222548
IPR044607Transcription factor RKD-likePANTHERPTHR46373PROTEIN RKD4coord: 2..51
NoneNo IPR availablePANTHERPTHR46373:SF2PROTEIN RKD4coord: 2..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_116contigContig_116:46013..46168 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|129470mRNA_11251Tribonema minus UTEX_B_3156 mRNAContig_116 46013..46168 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|129470|gw1.116.1.1 ID=Trimin1|129470|gw1.116.1.1|Name=jgi.p|Trimin1|129470|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=52bp
RASSLTLADLERYYSHPLAEASRELGLSATMLKKVCRSFGIKRWPHRQLA
SI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom
IPR044607RKD-like