Trimin1|129306|gw1.77.5.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|129306
Unique NameTrimin1|129306|gw1.77.5.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length131
Homology
BLAST of jgi.p|Trimin1|129306 vs. uniprot
Match: A0A835YTI4_9STRA (ATP-dependent DNA helicase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTI4_9STRA)

HSP 1 Score: 265 bits (678), Expect = 5.460e-90
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
Query:    1 ITGGPGTGKTHVLNTMVGMLPEGAVRVCATTGCAANNIDGDTAHSMFHIGVRGRNNDGRLTGRHLAAMQAESTNTYLIAMDEAGMASLDFTGRASIHTEQARQGDELRVRGPISISRHMDQQQLPAVGGNS 131
            ITGGPGTGKTHVLNTMVGMLPEGAVRVCATTGCAANNIDGDTAHSMFHIGVRGRNNDGRLTGRHLAAMQAESTNTYLIAMDEAGMASLDFTGRASIHTEQARQGDELRVRGPISISRHMDQQQLPAVGGNS
Sbjct:    1 ITGGPGTGKTHVLNTMVGMLPEGAVRVCATTGCAANNIDGDTAHSMFHIGVRGRNNDGRLTGRHLAAMQAESTNTYLIAMDEAGMASLDFTGRASIHTEQARQGDELRVRGPISISRHMDQQQLPAVGGNS 131          
BLAST of jgi.p|Trimin1|129306 vs. uniprot
Match: UPI00148A2BEA (uncharacterized protein LOC105334634 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A2BEA)

HSP 1 Score: 62.8 bits (151), Expect = 7.650e-9
Identity = 50/139 (35.97%), Postives = 67/139 (48.20%), Query Frame = 0
Query:    1 ITGGPGTGKTHVLNTMVG----MLPEG------AVRVCATTGCAANNIDGDTAHSMFHIGVRGRNNDG--RLTGRHLAAMQAESTNTYLIAMDEAGMASLDFTGRASIHTEQARQGDELRVRGPISISRHMDQQQLPAV 127
            I+GG GTGK+H++ T+V     +L  G       V V A TG AA NI+G T HS F + V     D   RL+G  L++M+A+  N  L+ +DE  M   D          +    DE    G IS+    D  QLP V
Sbjct:  759 ISGGAGTGKSHLIRTIVQTANKLLRVGQGEDDIVVMVSAFTGVAAFNIEGHTLHSAFSLPVNQSKRDDYIRLSGEQLSSMRAKLGNLSLLIIDEISMVGADHLYTVHRRLSEIMTSDE--PFGGISVLAVGDLSQLPPV 895          
BLAST of jgi.p|Trimin1|129306 vs. uniprot
Match: A0A504X8G0_LEIDO (ATP-dependent DNA helicase n=7 Tax=Leishmania donovani species complex TaxID=38574 RepID=A0A504X8G0_LEIDO)

HSP 1 Score: 60.1 bits (144), Expect = 6.670e-8
Identity = 29/58 (50.00%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    1 ITGGPGTGKTHVLNTMVGMLPEGAVRVCATTGCAANNIDGDTAHSMFHIGVRGRNNDG 58
            ITGG GTGK+H+L T++  LP     V ATTG AA N+ G T HS    G+  RN+ G
Sbjct:  398 ITGGAGTGKSHLLRTIIRALPSSCTFVTATTGIAALNLSGSTLHSFVGCGIPSRNSKG 455          
BLAST of jgi.p|Trimin1|129306 vs. uniprot
Match: Q4QII5_LEIMA (ATP-dependent DNA helicase n=2 Tax=Leishmania major TaxID=5664 RepID=Q4QII5_LEIMA)

HSP 1 Score: 59.7 bits (143), Expect = 9.020e-8
Identity = 29/58 (50.00%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    1 ITGGPGTGKTHVLNTMVGMLPEGAVRVCATTGCAANNIDGDTAHSMFHIGVRGRNNDG 58
            ITGG GTGK+H+L T++  LP  +  V ATTG AA N+ G T HS    G+  RN+ G
Sbjct:  275 ITGGAGTGKSHLLRTIIRALPASSTFVTATTGIAALNLSGSTLHSFVGCGIPDRNSKG 332          
BLAST of jgi.p|Trimin1|129306 vs. uniprot
Match: UPI00146F8A05 (LOW QUALITY PROTEIN: uncharacterized protein LOC117495116 n=1 Tax=Trematomus bernacchii TaxID=40690 RepID=UPI00146F8A05)

HSP 1 Score: 58.9 bits (141), Expect = 1.730e-7
Identity = 47/144 (32.64%), Postives = 70/144 (48.61%), Query Frame = 0
Query:    1 ITGGPGTGKTHVLNTM-------VGMLPEGAVRVC----ATTGCAANNIDGDTAHSMFHIGVRGRNNDGRLTGRHLAAMQAESTNTYLIAMDEAGMASLDFTGRASIH--TEQARQGDELRVRGPISISRHMDQQQLPAVGGNS 131
            ITGG GTGK+H++  +       +  L E    VC    A TG AA N+D  T H+ F IGV  +     L    + +++A+  N +++ +DE  M  +D    A IH    Q +Q  +    G +S+    D  QLP V GN+
Sbjct: 2194 ITGGAGTGKSHLIKALQYETTRLLSTLCENPDSVCVLLTAPTGIAAYNLDAATIHNTFSIGVNAKLPYTPLGEEKINSLRAKYRNVHILIVDEISM--VDHKLMAYIHGRLRQIKQCSDYSPFGRVSVVVVGDFFQLPPVKGNA 2335          
BLAST of jgi.p|Trimin1|129306 vs. uniprot
Match: E9ALB9_LEIMU (ATP-dependent DNA helicase n=1 Tax=Leishmania mexicana (strain MHOM/GT/2001/U1103) TaxID=929439 RepID=E9ALB9_LEIMU)

HSP 1 Score: 58.2 bits (139), Expect = 3.110e-7
Identity = 29/58 (50.00%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    1 ITGGPGTGKTHVLNTMVGMLPEGAVRVCATTGCAANNIDGDTAHSMFHIGVRGRNNDG 58
            ITGG GTGK+H+L T+V  LP     V ATTG AA N+ G T HS    G+  R++ G
Sbjct:  275 ITGGAGTGKSHLLRTIVRALPASCTFVTATTGIAALNLSGSTLHSFVGCGIPSRSSKG 332          
BLAST of jgi.p|Trimin1|129306 vs. uniprot
Match: E2DI23_CHIHA (ATP-dependent DNA helicase n=3 Tax=Notothenioidei TaxID=8205 RepID=E2DI23_CHIHA)

HSP 1 Score: 56.2 bits (134), Expect = 1.510e-6
Identity = 46/144 (31.94%), Postives = 69/144 (47.92%), Query Frame = 0
Query:    1 ITGGPGTGKTHVLNTM-------VGMLPEGAVRVC----ATTGCAANNIDGDTAHSMFHIGVRGRNNDGRLTGRHLAAMQAESTNTYLIAMDEAGMASLDFTGRASIH--TEQARQGDELRVRGPISISRHMDQQQLPAVGGNS 131
            ITGG GTGK+H++  +       +  L +    VC    A TG AA N+D  T H+ F IGV  +     L    + +++A+  N  ++ +DE  M  +D    A IH    Q +Q  +    G +S+    D  QLP V GN+
Sbjct: 2274 ITGGAGTGKSHLIKALQYETTRLLSPLCDHPDSVCVLLTAPTGIAAYNLDAATIHNTFSIGVNSKLPYTPLGEEKINSLRAKYRNVQIVIVDEISM--VDHKLMAYIHGRLRQIKQCIDYSPFGKVSVIVVGDFSQLPPVKGNA 2415          
BLAST of jgi.p|Trimin1|129306 vs. uniprot
Match: A0A836I210_9TRYP (ATP-dependent DNA helicase n=4 Tax=Mundinia TaxID=2249475 RepID=A0A836I210_9TRYP)

HSP 1 Score: 55.8 bits (133), Expect = 2.000e-6
Identity = 27/54 (50.00%), Postives = 34/54 (62.96%), Query Frame = 0
Query:    1 ITGGPGTGKTHVLNTMVGMLPEGAVRVCATTGCAANNIDGDTAHSMFHIGVRGR 54
            ITGG GTGK+H+L T++  LP  +  V ATTG AA N+ G T HS    G+  R
Sbjct:  388 ITGGAGTGKSHLLRTIIRALPASSTFVTATTGIAALNLGGSTLHSFVGCGIPNR 441          
BLAST of jgi.p|Trimin1|129306 vs. uniprot
Match: A0A812LYU9_9DINO (ATP-dependent DNA helicase n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812LYU9_9DINO)

HSP 1 Score: 55.8 bits (133), Expect = 2.050e-6
Identity = 44/131 (33.59%), Postives = 59/131 (45.04%), Query Frame = 0
Query:    1 ITGGPGTGKTHVLNT----MVGMLPEGAVRVCATTGCAANNIDGDTAHSMFHIGVRGRNNDGRLTGRHLAAMQAESTNTYLIAMDEAGMASLDFTGRASIHTEQARQGDELRVRGPISISRHMDQQQLPAV 127
            + GGPGTGKTH+LN     M   LP  AV  CA    AA  I G T H+ F +G+ GR          L ++     +  ++ +DE  M S +   R       A+Q    R  G + +    D QQLP V
Sbjct: 1917 LLGGPGTGKTHMLNLNAQLMERFLPGAAVS-CAFMNSAARLIKGTTLHAEFGMGLDGRQQTSTTA---LRSLTQRWQHKRILRIDEISMVSAELLARTESTARTAKQ-KLFRPWGDLLVDLSGDIQQLPPV 2042          
BLAST of jgi.p|Trimin1|129306 vs. uniprot
Match: A0A1Q9D860_SYMMI (ATP-dependent DNA helicase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9D860_SYMMI)

HSP 1 Score: 55.8 bits (133), Expect = 2.080e-6
Identity = 44/131 (33.59%), Postives = 59/131 (45.04%), Query Frame = 0
Query:    1 ITGGPGTGKTHVLNT----MVGMLPEGAVRVCATTGCAANNIDGDTAHSMFHIGVRGRNNDGRLTGRHLAAMQAESTNTYLIAMDEAGMASLDFTGRASIHTEQARQGDELRVRGPISISRHMDQQQLPAV 127
            + GGPGTGKTH+LN     M   LP  AV  CA    AA  I G T H+ F +G+ GR          L ++     +  ++ +DE  M S +   R       A+Q    R  G + +    D QQLP V
Sbjct: 4203 LLGGPGTGKTHMLNLNAQLMERFLPGAAVS-CAFMNSAARLIKGTTLHAEFGMGLDGRQQTSTTA---LRSLTQRWQHKRILRIDEISMVSAELLARTESTARTAKQ-KLFRPWGDLLVDLSGDIQQLPPV 4328          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|129306 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YTI4_9STRA5.460e-90100.00ATP-dependent DNA helicase (Fragment) n=1 Tax=Trib... [more]
UPI00148A2BEA7.650e-935.97uncharacterized protein LOC105334634 n=1 Tax=Crass... [more]
A0A504X8G0_LEIDO6.670e-850.00ATP-dependent DNA helicase n=7 Tax=Leishmania dono... [more]
Q4QII5_LEIMA9.020e-850.00ATP-dependent DNA helicase n=2 Tax=Leishmania majo... [more]
UPI00146F8A051.730e-732.64LOW QUALITY PROTEIN: uncharacterized protein LOC11... [more]
E9ALB9_LEIMU3.110e-750.00ATP-dependent DNA helicase n=1 Tax=Leishmania mexi... [more]
E2DI23_CHIHA1.510e-631.94ATP-dependent DNA helicase n=3 Tax=Notothenioidei ... [more]
A0A836I210_9TRYP2.000e-650.00ATP-dependent DNA helicase n=4 Tax=Mundinia TaxID=... [more]
A0A812LYU9_9DINO2.050e-633.59ATP-dependent DNA helicase n=2 Tax=Symbiodinium Ta... [more]
A0A1Q9D860_SYMMI2.080e-633.59ATP-dependent DNA helicase n=1 Tax=Symbiodinium mi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 2..87
e-value: 1.2E-11
score: 44.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..131
e-value: 5.9E-17
score: 63.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_77contigContig_77:615288..615680 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|129306mRNA_12496Tribonema minus UTEX_B_3156 mRNAContig_77 615288..615680 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|129306|gw1.77.5.1 ID=Trimin1|129306|gw1.77.5.1|Name=jgi.p|Trimin1|129306|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=131bp
ITGGPGTGKTHVLNTMVGMLPEGAVRVCATTGCAANNIDGDTAHSMFHIG
VRGRNNDGRLTGRHLAAMQAESTNTYLIAMDEAGMASLDFTGRASIHTEQ
ARQGDELRVRGPISISRHMDQQQLPAVGGNS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010285DNA_helicase_pif1-like
IPR027417P-loop_NTPase