Trimin1|100104|CE100103_35 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|100104
Unique NameTrimin1|100104|CE100103_35
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length149
Homology
BLAST of jgi.p|Trimin1|100104 vs. uniprot
Match: A0A836C765_9STRA (LITAF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C765_9STRA)

HSP 1 Score: 310 bits (794), Expect = 4.130e-107
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
Query:    1 MVRSTPQDDPTYKPPSENPAYAQAAPYQPEQAYVMEGAAVQTGPAQQQPYQAYAVPVQNPGVPGVQVVGQPVVTGQPSSAIYVVHQGVTCRYCGHTGPVVTQNRGPGFVAWCWCFVLFLVFWPLCWLPFVIDACMDREIICSNCRRAL 148
            MVRSTPQDDPTYKPPSENPAYAQAAPYQPEQAYVMEGAAVQTGPAQQQPYQAYAVPVQNPGVPGVQVVGQPVVTGQPSSAIYVVHQGVTCRYCGHTGPVVTQNRGPGFVAWCWCFVLFLVFWPLCWLPFVIDACMDREIICSNCRRAL
Sbjct:    1 MVRSTPQDDPTYKPPSENPAYAQAAPYQPEQAYVMEGAAVQTGPAQQQPYQAYAVPVQNPGVPGVQVVGQPVVTGQPSSAIYVVHQGVTCRYCGHTGPVVTQNRGPGFVAWCWCFVLFLVFWPLCWLPFVIDACMDREIICSNCRRAL 148          
BLAST of jgi.p|Trimin1|100104 vs. uniprot
Match: A0A6P8HUX7_ACTTE (cell death-inducing p53-target protein 1 homolog n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HUX7_ACTTE)

HSP 1 Score: 66.2 bits (160), Expect = 6.300e-11
Identity = 30/57 (52.63%), Postives = 32/57 (56.14%), Query Frame = 0
Query:   90 CRYCGHTGPVVTQNRGPGFVAWCWCFVLFLVFWPLCWLPFVIDACMDREIICSNCRR 146
            C +C     V      PG +AW  C VLF VFWP CWLPFVID C D    C NCRR
Sbjct:   86 CPHC-QASIVTATEYVPGSLAWIICVVLFFVFWPCCWLPFVIDGCKDVLHSCPNCRR 141          
BLAST of jgi.p|Trimin1|100104 vs. uniprot
Match: UPI000A2A664D (cell death-inducing p53-target protein 1 homolog n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A664D)

HSP 1 Score: 63.9 bits (154), Expect = 4.620e-10
Identity = 31/76 (40.79%), Postives = 37/76 (48.68%), Query Frame = 0
Query:   70 QPVVTGQPSSAIYVVHQGVTCRYCGHTGPVVTQNRGPGFVAWCWCFVLFLVFWPLCWLPFVIDACMDREIICSNCR 145
            QPV T    +        + C +C     +      PG +AW  C VLF +FWP CWLPFVID C D    C NCR
Sbjct:   64 QPVTTIVTGAMFGEAPVSMVCPHC-RASIITATEYVPGTLAWIICLVLFFLFWPCCWLPFVIDGCKDVLHSCPNCR 138          
BLAST of jgi.p|Trimin1|100104 vs. uniprot
Match: A0A1D1Y5Q0_9ARAE (LITAF domain-containing protein (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Y5Q0_9ARAE)

HSP 1 Score: 57.8 bits (138), Expect = 5.720e-7
Identity = 26/70 (37.14%), Postives = 38/70 (54.29%), Query Frame = 0
Query:   77 PSSAIYVVHQGVTCRYCGHTGPVVTQNRGPGFVAWCWCFVLFLVFWPLCWLPFVIDACMDREIICSNCRR 146
            P +   VV  G  C +C      +T N  PG  ++    ++FL+FWPLCW+P V   C+D + +C NC R
Sbjct:  238 PPNVNPVVVTGYVCPHCNSNLTPIT-NYTPGTASYISGVLIFLIFWPLCWVPCVSRTCLDEKDVCRNCNR 306          
BLAST of jgi.p|Trimin1|100104 vs. uniprot
Match: A0A8C6TYJ5_9GOBI (Si:ch211-202h22.8 n=1 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6TYJ5_9GOBI)

HSP 1 Score: 55.1 bits (131), Expect = 9.550e-7
Identity = 31/82 (37.80%), Postives = 41/82 (50.00%), Query Frame = 0
Query:   68 VGQPVVTGQPSSAIYVVHQGVTCRYCGHTGPVVTQNRGPGFVAWCWCFVL-FLVFWPLCWLPFVIDACMDREIICSNCRRAL 148
            V QPVV  QP+         + C +C      VT+ +  G + W  C ++   +FWP CW+PFVIDAC D E  C  C   L
Sbjct:   57 VVQPVVLVQPTPTDCPGQ--MMCPHCQSHVVTVTEYKN-GALTWLICGIIGIFLFWPCCWIPFVIDACKDVEHTCPQCHNVL 135          
BLAST of jgi.p|Trimin1|100104 vs. uniprot
Match: A0A7S1Y9N8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y9N8_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.590e-6
Identity = 25/58 (43.10%), Postives = 33/58 (56.90%), Query Frame = 0
Query:   89 TCRYCGHTGPVVTQNRG-PGFVAWCWCFVLFLVFWPLCWLPFVIDACMDREIICSNCR 145
            TC  C    P VT+ R  P F+ W  C VLF++FWP+ W+P V D+C   +  CS C 
Sbjct:   79 TCPVCNV--PSVTRVRTYPDFLTWILCIVLFVLFWPIFWIPLVCDSCKMTKHYCSQCN 134          
BLAST of jgi.p|Trimin1|100104 vs. uniprot
Match: A0A7S4RD72_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RD72_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 8.970e-6
Identity = 24/75 (32.00%), Postives = 36/75 (48.00%), Query Frame = 0
Query:   70 QPVVTGQPSSAIYVVHQGVTCRYCGHTGPVVTQNRGPGFVAWCWCFVLFLVFWPLCWLPFVIDACMDREIICSNC 144
            Q  + G P+   + +  G +C +CG           P F  W    VL ++FWPLCWLP V+D     +  C++C
Sbjct:   63 QSAIIGGPTFRRFPIMIG-SCPHCGIRNTRTKTRTYPNFATWALAGVLLILFWPLCWLPLVMDKTKKTDHFCTSC 136          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|100104 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A836C765_9STRA4.130e-107100.00LITAF domain-containing protein n=1 Tax=Tribonema ... [more]
A0A6P8HUX7_ACTTE6.300e-1152.63cell death-inducing p53-target protein 1 homolog n... [more]
UPI000A2A664D4.620e-1040.79cell death-inducing p53-target protein 1 homolog n... [more]
A0A1D1Y5Q0_9ARAE5.720e-737.14LITAF domain-containing protein (Fragment) n=1 Tax... [more]
A0A8C6TYJ5_9GOBI9.550e-737.80Si:ch211-202h22.8 n=1 Tax=Neogobius melanostomus T... [more]
A0A7S1Y9N8_9STRA1.590e-643.10Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S4RD72_9STRA8.970e-632.00Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006629LPS-induced tumour necrosis factor alpha factorSMARTSM00714litafcoord: 85..148
e-value: 0.0027
score: 22.1
IPR006629LPS-induced tumour necrosis factor alpha factorPFAMPF10601zf-LITAF-likecoord: 86..147
e-value: 1.3E-10
score: 41.3
IPR006629LPS-induced tumour necrosis factor alpha factorPROSITEPS51837LITAFcoord: 70..148
score: 10.631603
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availablePANTHERPTHR23292:SF6FI16602P1-RELATEDcoord: 8..146
IPR037519LITAF domain containing proteinPANTHERPTHR23292LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTORcoord: 8..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_94contigContig_94:288052..289257 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|100104mRNA_7966Tribonema minus UTEX_B_3156 mRNAContig_94 287936..289848 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|100104|CE100103_35 ID=Trimin1|100104|CE100103_35|Name=jgi.p|Trimin1|100104|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=149bp
MVRSTPQDDPTYKPPSENPAYAQAAPYQPEQAYVMEGAAVQTGPAQQQPY
QAYAVPVQNPGVPGVQVVGQPVVTGQPSSAIYVVHQGVTCRYCGHTGPVV
TQNRGPGFVAWCWCFVLFLVFWPLCWLPFVIDACMDREIICSNCRRAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006629LITAF
IPR037519LITAF_fam