mRNA_9900 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|156153 vs. uniprot
Match: A0A836CM80_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM80_9STRA) HSP 1 Score: 199 bits (506), Expect = 6.180e-65 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 1
Query: 1 RRHRHVLQRQFSEASSPPPEVLRGLNMEGVSLDKRSWLEVRDPQHRYGKLLRLYYSEWDRLGKPGNSFFRWLEQREEGVEGCAREELDRDTVRY 282
RRHRHVLQRQFSEASSPPPEVLRGLNMEGVSLDKRSWLEVRDPQHRYGKLLRLYYSEWDRLGKPGNSFFRWLEQREEGVEGCAREELDRDTVRY
Sbjct: 1 RRHRHVLQRQFSEASSPPPEVLRGLNMEGVSLDKRSWLEVRDPQHRYGKLLRLYYSEWDRLGKPGNSFFRWLEQREEGVEGCAREELDRDTVRY 94
BLAST of jgi.p|Trimin1|156153 vs. uniprot
Match: D8LDY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY1_ECTSI) HSP 1 Score: 125 bits (314), Expect = 9.980e-35 Identity = 60/95 (63.16%), Postives = 69/95 (72.63%), Query Frame = 1
Query: 1 RRHRHVLQRQFS-EASSPPPEVLRGLNMEGVSLDKRSWLEVRDPQHRYGKLLRLYYSEWDRLGKPGNSFFRWLEQREEGVEGCAREELDRDTVRY 282
R H L Q+S EAS+PPP+VL+G M V+LDKRSWLEVRD QHRYGK LRLY+ EWDR GKPG SFF+WL E +EGC R EL+ D V Y
Sbjct: 30 REHSSTLYHQYSNEASAPPPQVLQGWKMNCVALDKRSWLEVRDKQHRYGKNLRLYFKEWDRRGKPGGSFFKWLSAAEVQLEGCPRHELESDVVHY 124
BLAST of jgi.p|Trimin1|156153 vs. uniprot
Match: A0A6H5KBQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBQ8_9PHAE) HSP 1 Score: 125 bits (314), Expect = 1.510e-31 Identity = 60/95 (63.16%), Postives = 69/95 (72.63%), Query Frame = 1
Query: 1 RRHRHVLQRQFS-EASSPPPEVLRGLNMEGVSLDKRSWLEVRDPQHRYGKLLRLYYSEWDRLGKPGNSFFRWLEQREEGVEGCAREELDRDTVRY 282
R H L Q+S EAS+PPP+VL+G M V+LDKRSWLEVRD QHRYGK LRLY+ EWDR GKPG SFF+WL E +EGC R EL+ D V Y
Sbjct: 270 REHSSTLYHQYSNEASAPPPQVLQGWKMNCVALDKRSWLEVRDKQHRYGKNLRLYFKEWDRRGKPGGSFFKWLSAAEVQLEGCPRHELESDVVHY 364
BLAST of jgi.p|Trimin1|156153 vs. uniprot
Match: A0A7S2FAR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FAR6_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 5.970e-22 Identity = 44/80 (55.00%), Postives = 54/80 (67.50%), Query Frame = 1
Query: 49 PPPEVLRGLNMEGVS-LDKRSWLEVRDPQHRYGKLLRLYYSEWDRLGKPGNSFFRWLEQRE-EGVEGCAREELDRDTVRY 282
PPPEVLRG + S LD+RSWLEV DP+HRY K LR Y+ WD +GKPG+SF WL + +E C R LD++TV Y
Sbjct: 11 PPPEVLRGFSAGSTSQLDRRSWLEVLDPKHRYAKNLRSYFEAWDLMGKPGDSFLEWLHNEDCMELESCPRSVLDKETVHY 90
BLAST of jgi.p|Trimin1|156153 vs. uniprot
Match: A0A7S2SKQ1_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKQ1_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 8.120e-18 Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 49 PPPEVLRGLNMEGVSLDKRSWLEVRDPQHRYGKLLRLYYSEWDRLGKPGNSFFRWLEQREEGVEGCAREELDRDTVRY 282
PP EV RGL LD+R+WLEV DP+HRY K LR YY WD L +PG+ F WL+ ++ C R L+ DTV Y
Sbjct: 241 PPDEVTRGLREGFSQLDRRAWLEVLDPKHRYAKHLRAYYQAWDLLDRPGSDFLSWLDTAGFELDSCPRSVLEADTVHY 318
BLAST of jgi.p|Trimin1|156153 vs. uniprot
Match: A0A8H8SBV4_9HELO (IQ domain-containing protein n=1 Tax=Lachnellula occidentalis TaxID=215460 RepID=A0A8H8SBV4_9HELO) HSP 1 Score: 58.2 bits (139), Expect = 8.380e-8 Identity = 31/66 (46.97%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 94 LDKRSWLEVRDPQHRYGKLLRLYYSEWDRLGKPGNSFFRWLEQREE---GVEGCAREELDRDTVRY 282
+D + +LE+ D +HRYG LR+Y+ EW R N FF WL+ E EGC RE LDR+ VRY
Sbjct: 207 MDLQYFLEMVDLKHRYGSNLRIYHEEWKRSDTKEN-FFYWLDYGEGRFIDCEGCPRERLDREQVRY 271
BLAST of jgi.p|Trimin1|156153 vs. uniprot
Match: K1XBU9_MARBU (IQ calmodulin-binding motif protein n=1 Tax=Marssonina brunnea f. sp. multigermtubi (strain MB_m1) TaxID=1072389 RepID=K1XBU9_MARBU) HSP 1 Score: 58.2 bits (139), Expect = 8.420e-8 Identity = 30/66 (45.45%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 94 LDKRSWLEVRDPQHRYGKLLRLYYSEWDRLGKPGNSFFRWLEQREE---GVEGCAREELDRDTVRY 282
+D + +LE+ D +HRYG LR+Y+ EW R N FF WL+ E +GC RE LDR+ VRY
Sbjct: 253 MDLQYFLEMVDVKHRYGSNLRIYHEEWKRADTKEN-FFYWLDYGEGRFINCQGCPRERLDREQVRY 317
BLAST of jgi.p|Trimin1|156153 vs. uniprot
Match: A0A428PPP5_9HYPO (Uncharacterized protein n=6 Tax=Fusarium solani species complex TaxID=232080 RepID=A0A428PPP5_9HYPO) HSP 1 Score: 56.2 bits (134), Expect = 3.970e-7 Identity = 30/63 (47.62%), Postives = 39/63 (61.90%), Query Frame = 1
Query: 103 RSWLEVRDPQHRYGKLLRLYYSEWDRLGKPGNSFFRWL---EQREEGVEGCAREELDRDTVRY 282
R +LE+ D +HRYG L +Y+ EW R N FF WL E RE +EGC R+ L+R+ VRY
Sbjct: 196 RYFLEMVDLKHRYGSSLCMYHEEWKRSNTKEN-FFYWLDYGEGREVELEGCPRDRLEREQVRY 257
BLAST of jgi.p|Trimin1|156153 vs. uniprot
Match: A0A218ZB15_9HELO (Uncharacterized protein n=1 Tax=Marssonina coronariae TaxID=503106 RepID=A0A218ZB15_9HELO) HSP 1 Score: 56.2 bits (134), Expect = 4.000e-7 Identity = 29/66 (43.94%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 94 LDKRSWLEVRDPQHRYGKLLRLYYSEWDRLGKPGNSFFRWLEQREE---GVEGCAREELDRDTVRY 282
+D + +LE+ D +HRYG LR Y+ EW + N FF WL+ E +GC+RE LDR+ VRY
Sbjct: 247 MDLQYFLEIVDVKHRYGSNLRTYHEEWAQADTKEN-FFYWLDYGEGRFIDCQGCSRERLDREQVRY 311
BLAST of jgi.p|Trimin1|156153 vs. uniprot
Match: A0A5N6KKI8_MONLA (Uncharacterized protein n=1 Tax=Monilinia laxa TaxID=61186 RepID=A0A5N6KKI8_MONLA) HSP 1 Score: 55.5 bits (132), Expect = 7.550e-7 Identity = 29/66 (43.94%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 94 LDKRSWLEVRDPQHRYGKLLRLYYSEWDRLGKPGNSFFRWLEQREE---GVEGCAREELDRDTVRY 282
+D + +LE+ D +HRYG LR Y+ EW++ N FF WL+ E +GC RE LDR+ VRY
Sbjct: 324 MDLQYFLEMVDLKHRYGSNLRTYHEEWNKADTNEN-FFYWLDYGEGRFIDCQGCPRERLDREQVRY 388 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156153 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9900 ID=mRNA_9900|Name=jgi.p|Trimin1|156153|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=282bp|location=Sequence derived from alignment at Contig_129:434501..435188+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. AGGAGGCACAGGCATGTCCTGCAGAGGCAGTTCTCCGAAGCCAGCAGCCCback to top protein sequence of jgi.p|Trimin1|156153 >Trimin1|156153|gw1.129.126.1 ID=Trimin1|156153|gw1.129.126.1|Name=jgi.p|Trimin1|156153|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=94bp RRHRHVLQRQFSEASSPPPEVLRGLNMEGVSLDKRSWLEVRDPQHRYGKLback to top mRNA from alignment at Contig_129:434501..435188+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9900 ID=mRNA_9900|Name=jgi.p|Trimin1|156153|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=688bp|location=Sequence derived from alignment at Contig_129:434501..435188+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_129:434501..435188+ >mRNA_9900 ID=mRNA_9900|Name=jgi.p|Trimin1|156153|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=282bp|location=Sequence derived from alignment at Contig_129:434501..435188+ (Tribonema minus UTEX_B_3156 )back to top |