mRNA_9860 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352724
Unique NamemRNA_9860
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352724 vs. uniprot
Match: A0A835ZBA6_9STRA (Acyl-CoA N-acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBA6_9STRA)

HSP 1 Score: 301 bits (771), Expect = 2.270e-103
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1
Query:    1 MLDVDAFKGYFLSHNAFVVRAVDSGHVMGVFYIKPNFPGRCSHICNGGFITEPAFRGRGVGTLMAKAFLWLARDIGYKASYFNLVFANNAASQALWDGLGFTRLAVVPKAGRLKGVDGLVDAIQYYYDLESLRDADNFLRTLSSEAEA 444
            MLDVDAFKGYFLSHNAFVVRAVDSGHVMGVFYIKPNFPGRCSHICNGGFITEPAFRGRGVGTLMAKAFLWLARDIGYKASYFNLVFANNAASQALWDGLGFTRLAVVPKAGRLKGVDGLVDAIQYYYDLESLRDADNFLRTLSSEAEA
Sbjct:    1 MLDVDAFKGYFLSHNAFVVRAVDSGHVMGVFYIKPNFPGRCSHICNGGFITEPAFRGRGVGTLMAKAFLWLARDIGYKASYFNLVFANNAASQALWDGLGFTRLAVVPKAGRLKGVDGLVDAIQYYYDLESLRDADNFLRTLSSEAEA 148          
BLAST of jgi.p|Trimin1|352724 vs. uniprot
Match: A0A7S2XXY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXY2_9STRA)

HSP 1 Score: 177 bits (449), Expect = 1.390e-52
Identity = 87/157 (55.41%), Postives = 109/157 (69.43%), Query Frame = 1
Query:    4 LDVDAFKGYFLSHNAFVVR-AVDSGHVMGVFYIKPNFPGRCSHICNGGFITEPAFRGRGVGTLMAKAFLWLARDIGYKASYFNLVFANNAASQALWDGLGFTRLAVVPKAGRLKGVDGLVDAIQYYYDLESLRDADNFLRTLSSEAEA*LGTAGTMY 471
            + ++ F+ YFLSH AFVVR A +   V+G+FYIKPNFPGRCSHICNGGFIT P +R  G+  LM   FL +A+D+GYKASYFNLVF  N AS  LW  LGF  +A VPKA RLKG+DG  DA+Q+YYDLE+  D  + + T  S+    L  A  ++
Sbjct:  112 MTMEGFRSYFLSHAAFVVRKAEEPSEVLGMFYIKPNFPGRCSHICNGGFITLPEYRRLGIAKLMGHNFLRMAKDLGYKASYFNLVFVTNTASIKLWKKLGFRCIARVPKAARLKGIDGCTDALQFYYDLENFGDPSSLISTYGSKKALYLSVAAVVF 268          
BLAST of jgi.p|Trimin1|352724 vs. uniprot
Match: A0A7S4SMR7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SMR7_9STRA)

HSP 1 Score: 170 bits (431), Expect = 7.380e-50
Identity = 82/142 (57.75%), Postives = 101/142 (71.13%), Query Frame = 1
Query:   13 DAFKGYFLSHNAFVVRAV--------------DSGHVMGVFYIKPNFPGRCSHICNGGFITEPAFRGRGVGTLMAKAFLWLARDIGYKASYFNLVFANNAASQALWDGLGFTRLAVVPKAGRLKGVDGLVDAIQYYYDLESL 396
            ++++ Y+LSH AFVVR V                G VMG FY+KPNFPGRCSH+CNGGFIT+P FRG GVG LM  +FL LARD+ YK++YFNLVF +N  S  LW+ LGFTR+A +P A RL+GVDGL DA  YY+DL +L
Sbjct:  124 ESYRSYYLSHAAFVVRCVVDNDASELDKSSSPTHGEVMGTFYVKPNFPGRCSHVCNGGFITDPKFRGSGVGRLMGSSFLALARDLQYKSAYFNLVFKSNPVSIQLWESLGFTRVATIPNAARLEGVDGLDDAYGYYFDLTTL 265          
BLAST of jgi.p|Trimin1|352724 vs. uniprot
Match: A0A1Z5JQ04_FISSO (N-acetyltransferase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQ04_FISSO)

HSP 1 Score: 167 bits (423), Expect = 1.360e-49
Identity = 80/132 (60.61%), Postives = 100/132 (75.76%), Query Frame = 1
Query:   10 VDAFKGYFLSHNAFVVRAVDSGHVMGVFYIKPNFPGRCSHICNGGFITEPAFRGRGVGTLMAKAFLWLARDIGYKASYFNLVFANNAASQALWDGLGFTRLAVVPKAGRLKGVDGLVDAIQYYYDLESLRDA 405
            ++A++GYFLSH AFVVR +++  V G FYIKPNFPGRCSHICNGGFIT P +R RGV  LM K FL  A  +GYK++YFNLVF +N AS ALW+ LGF R+AV+ +A RLKG+D L  A  Y YDLE + ++
Sbjct:   71 LEAYRGYFLSHAAFVVRCLETKEVAGCFYIKPNFPGRCSHICNGGFITHPDYRRRGVAHLMGKVFLKAAHQLGYKSAYFNLVFQSNEASVALWESLGFQRVAVLEQAARLKGLDKLDTAYGYRYDLEKMDES 202          
BLAST of jgi.p|Trimin1|352724 vs. uniprot
Match: A0A7S0EEN8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EEN8_9CRYP)

HSP 1 Score: 168 bits (426), Expect = 1.910e-49
Identity = 83/154 (53.90%), Postives = 110/154 (71.43%), Query Frame = 1
Query:   10 VDAFKGYFLSHNAFVVRAVDSG-----------HVMGVFYIKPNFPGRCSHICNGGFITEPAFRGRGVGTLMAKAFLWLARDIGYKASYFNLVFANNAASQALWDGLGFTRLAVVPKAGRLKGVDGLVDAIQYYYDLESLRDADNFLRTLSSEA 438
            +D F+GYFLSH AFVVRA+++G            +MG+FYIKPN+PGRCSH+CNGGFIT+  FR +GVG LM   +L LAR +GY+ SYFNLVFA+N  S  LWDGLGF R++ + K  +LKG++GLVDA  Y YDL  + +A + L+   S++
Sbjct:   67 MDDFRGYFLSHTAFVVRAINAGLDSNSRFSHPGDIMGIFYIKPNYPGRCSHVCNGGFITKKDFRKQGVGRLMGACYLQLARALGYEMSYFNLVFASNEESIRLWDGLGFERVSHLRKCAKLKGIEGLVDAYGYCYDLAKVDEAFDPLQLAKSKS 220          
BLAST of jgi.p|Trimin1|352724 vs. uniprot
Match: A0A507FPU4_9FUNG (N-acetyltransferase domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FPU4_9FUNG)

HSP 1 Score: 166 bits (419), Expect = 5.840e-49
Identity = 79/134 (58.96%), Postives = 97/134 (72.39%), Query Frame = 1
Query:    1 MLDVDAFKGYFLSHNAFVVRAVDSGHVMGVFYIKPNFPGRCSHICNGGFITEPAFRGRGVGTLMAKAFLWLARDIGYKASYFNLVFANNAASQALWDGLGFTRLAVVPKAGRLKGVDGLVDAIQYYYDLESLRD 402
            ++D DAFK YFLS +AF++ + D   +MG FYIKPN+PGRCSH+CNGGFIT   FRG+GVG LMA+AFL LA  +GYKAS FNLVF  N  S  LW  LGF  +  +PKAGRL G D  VDAI +YYD + + +
Sbjct:   72 IMDDDAFKAYFLSASAFMISSPDRSQIMGTFYIKPNYPGRCSHVCNGGFITNSQFRGKGVGKLMAEAFLTLAPLLGYKASVFNLVFETNTPSVNLWRSLGFKEVGRIPKAGRLNGHDKRVDAIVFYYDFDDVEN 205          
BLAST of jgi.p|Trimin1|352724 vs. uniprot
Match: A0A7S2H5G4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H5G4_9STRA)

HSP 1 Score: 164 bits (414), Expect = 8.180e-49
Identity = 80/148 (54.05%), Postives = 100/148 (67.57%), Query Frame = 1
Query:   19 FKGYFLSHNAFVVRAVDSGH--------------------VMGVFYIKPNFPGRCSHICNGGFITEPAFRGRGVGTLMAKAFLWLARDIGYKASYFNLVFANNAASQALWDGLGFTRLAVVPKAGRLKGVDGLVDAIQYYYDLESLRD 402
            ++ YFLSH AFVVR+V +G                     ++G FY+KPNFPGRCSH+CNGGFIT+P FR  GVG LM  +FL LARD+ YK++YFNLVF +N  S  LW+ LGFTR+A +P A RL+GV+GL DA  YY+DL  L D
Sbjct:    1 YRSYFLSHAAFVVRSVAAGEATTTTAPNNSPSTNIINPGKILGTFYVKPNFPGRCSHVCNGGFITDPQFRSIGVGRLMGSSFLALARDLQYKSAYFNLVFKSNPVSIRLWESLGFTRVATIPNAARLEGVEGLDDAYGYYFDLTGLPD 148          
BLAST of jgi.p|Trimin1|352724 vs. uniprot
Match: A0A7S3M1P3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1P3_9STRA)

HSP 1 Score: 164 bits (415), Expect = 3.080e-48
Identity = 80/139 (57.55%), Postives = 100/139 (71.94%), Query Frame = 1
Query:    7 DVDAFKGYFLSHNAFVVR----AVDSGHVMGVFYIKPNFPGRCSHICNGGFITEPAFRGRGVGTLMAKAFLWLARDIGYKASYFNLVFANNAASQALWDGLGFTRLAVVPKAGRLKGVDGLVDAIQYYYDLESLRDADN 411
            D+D++K YF SH+AF V+    AV    V+G FYIKPNFPGRCSH+CNGGFIT P++RG GVG  M + F  LA+D+GY+AS FNLVFANN AS  LW  LGFT+LAV+PK   L+G +G VDA Q++ D  +    DN
Sbjct:   77 DLDSYKSYFHSHSAFAVKFQDTAVHGDDVLGCFYIKPNFPGRCSHVCNGGFITNPSYRGLGVGAFMGENFKRLAKDLGYRASLFNLVFANNIASVKLWRKLGFTQLAVIPKVAVLEGSEGYVDAYQFHCDFYAEESEDN 215          
BLAST of jgi.p|Trimin1|352724 vs. uniprot
Match: A0A0G4H2G9_VITBC (N-acetyltransferase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H2G9_VITBC)

HSP 1 Score: 163 bits (413), Expect = 4.320e-48
Identity = 80/131 (61.07%), Postives = 99/131 (75.57%), Query Frame = 1
Query:    4 LDVDAFKGYFLSHNAFVVRAVDS----GHVMGVFYIKPNFPGRCSHICNGGFITEPAFRGRGVGTLMAKAFLWLARDIGYKASYFNLVFANNAASQALWDGLGFTRLAVVPKAGRLKGVDGLVDAIQYYYD 384
            +D + F+ Y+LSH+ FV R   S    G V+G FYIKPN+PGRCSHICNGGF+ +  +RGRG+G  MA+ FL LA  +GY+AS+FNLVFA+N AS  LWD LGF R+ VVP+AGRLKG+ G VDAIQY YD
Sbjct:   64 MDAETFEAYYLSHDVFVCRITSSDSLAGTVVGSFYIKPNWPGRCSHICNGGFLVDRPYRGRGIGRFMAECFLKLAPALGYRASFFNLVFASNEASIRLWDSLGFERVGVVPRAGRLKGL-GYVDAIQYMYD 193          
BLAST of jgi.p|Trimin1|352724 vs. uniprot
Match: A0A6H5J9S4_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S4_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 1.210e-47
Identity = 78/110 (70.91%), Postives = 89/110 (80.91%), Query Frame = 1
Query:   79 VMGVFYIKPNFPGRCSHICNGGFITEPAFRGRGVGTLMAKAFLWLARDIGYKASYFNLVFANNAASQALWDGLGFTRLAVVPKAGRLKGVDGLVDAIQYYYDLESLRDAD 408
            V G FYIKPNFPGRCSH+CNGGFIT+P  R RGV  LM  AFL  A+D+GY+ASYFNLVF +N AS  LW GLGFT LAVVPKA RLKG+DGLVDA Q++YDL++LR  D
Sbjct:  172 VWGTFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYRASYFNLVFRSNEASLRLWRGLGFTELAVVPKAARLKGIDGLVDASQFHYDLDNLRQED 281          
BLAST of jgi.p|Trimin1|352724 vs. uniprot
Match: A0A835ZB95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB95_9STRA)

HSP 1 Score: 265 bits (678), Expect = 4.680e-89
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 3
Query:  126 MRNLTAVSVSALALLTAVPVASGMGANDPIADNNLGKIARTCAAALCPDTKDSLQLWMELQPVCMGRTKGILSNFQVLPGESADGTNGASISLWSPFVVGAACALAAVVGVVFGLRSGAQMGMKYSRIEVPRTCQP 533
            MRNLTAVSVSALALLTAVPVASGMGANDPIADNNLGKIARTCAAALCPDTKDSLQLWMELQPVCMGRTKGILSNFQVLPGESADGTNGASISLWSPFVVGAACALAAVVGVVFGLRSGAQMGMKYSRIEVPRTCQP
Sbjct:    1 MRNLTAVSVSALALLTAVPVASGMGANDPIADNNLGKIARTCAAALCPDTKDSLQLWMELQPVCMGRTKGILSNFQVLPGESADGTNGASISLWSPFVVGAACALAAVVGVVFGLRSGAQMGMKYSRIEVPRTCQP 136          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352724 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZBA6_9STRA2.270e-103100.00Acyl-CoA N-acyltransferase n=1 Tax=Tribonema minus... [more]
A0A7S2XXY2_9STRA1.390e-5255.41Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S4SMR7_9STRA7.380e-5057.75Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1Z5JQ04_FISSO1.360e-4960.61N-acetyltransferase domain-containing protein n=2 ... [more]
A0A7S0EEN8_9CRYP1.910e-4953.90Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A507FPU4_9FUNG5.840e-4958.96N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S2H5G4_9STRA8.180e-4954.05Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A7S3M1P3_9STRA3.080e-4857.55Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A0G4H2G9_VITBC4.320e-4861.07N-acetyltransferase domain-containing protein n=2 ... [more]
A0A6H5J9S4_9PHAE1.210e-4770.91N-acetyltransferase domain-containing protein n=1 ... [more]

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BLAST of jgi.p|Trimin1|352724 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZB95_9STRA4.680e-89100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_129contigContig_129:271267..272803 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352724|estExt_Genemark1.C_Ctg_1290040
GOsGO:0000122,GO:0000183,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003824,GO:0004402,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006082,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006357,GO:0006464,GO:0006473,GO:0006475,GO:0006520,GO:0006525,GO:0006526,GO:0006560,GO:0006562,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010484,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016053,GO:0016054,GO:0016407,GO:0016410,GO:0016458,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0030466,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032931,GO:0033554,GO:0034212,GO:0034641,GO:0036211,GO:0040029,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0043543,GO:0043565,GO:0043966,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0046394,GO:0046395,GO:0046483,GO:0046700,GO:0046941,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051716,GO:0060255,GO:0061733,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097043,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1902679,GO:1903506,GO:1903507,GO:1990841,GO:2000112,GO:2000113,GO:2001141
Preferred nameSPT10
DescriptionN-acetyltransferase activity
COG categoryK
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0454@1|root,2QRFX@2759|Eukaryota
Evalue7.66e-48
Seed ortholog55529.EKX53078
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Ec32 orthologEc-07_002520.1
TranscriptId353046
TrackFilteredModels1
ProteinId352724
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352724gene_9860Tribonema minus UTEX_B_3156 geneContig_129 271267..272803 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9860_1exon_9860_1Tribonema minus UTEX_B_3156 exonContig_129 271267..271391 +
exon_9860_2exon_9860_2Tribonema minus UTEX_B_3156 exonContig_129 271702..271828 +
exon_9860_3exon_9860_3Tribonema minus UTEX_B_3156 exonContig_129 272569..272803 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9860CDS_9860Tribonema minus UTEX_B_3156 CDSContig_129 271267..271391 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_9860UTR3_9860Tribonema minus UTEX_B_3156 three_prime_UTRContig_129 272764..272803 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352724Trimin1|352724|estExt_Genemark1.C_Ctg_1290040Tribonema minus UTEX_B_3156 polypeptideContig_129 271267..272763 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9860 ID=mRNA_9860|Name=jgi.p|Trimin1|352724|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=487bp|location=Sequence derived from alignment at Contig_129:271267..272803+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGGATGTGGATGCGTTCAAAGGCTACTTCCTGTCACACAATGCATT
CGTGGTACGCGCTGTCGACAGCGGGCACGTCATGGGCGTCTTCTACATCA
AGCCAAATTTCCCCGGTCGCTGCAGCCACATATGCAACGGCGGCTTCATC
ACAGAGCCCGCTTTCAGGGGGCGCGGAGTGGGGACGCTCATGGCCAAGGC
ATTCCTCTGGCTCGCCAGGGACATTGGCTACAAGGCCTCCTACTTCAACC
TGGTGTTCGCCAACAATGCAGCGAGTCAGGCGCTCTGGGACGGTCTCGGC
TTCACGCGCCTGGCGGTGGTGCCCAAGGCGGGACGCTTGAAAGGCGTCGA
CGGCCTCGTGGACGCCATTCAGTACTACTACGACCTGGAGAGCCTGAGAG
ACGCAGACAACTTCCTGCGCACGCTCAGCTCGGAAGCAGAAGCGTAGCTC
GGCACAGCCGGCACAATGTATTTGAACATGTACATGT
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protein sequence of jgi.p|Trimin1|352724

>Trimin1|352724|estExt_Genemark1.C_Ctg_1290040 ID=Trimin1|352724|estExt_Genemark1.C_Ctg_1290040|Name=jgi.p|Trimin1|352724|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=149bp
MLDVDAFKGYFLSHNAFVVRAVDSGHVMGVFYIKPNFPGRCSHICNGGFI
TEPAFRGRGVGTLMAKAFLWLARDIGYKASYFNLVFANNAASQALWDGLG
FTRLAVVPKAGRLKGVDGLVDAIQYYYDLESLRDADNFLRTLSSEAEA*
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mRNA from alignment at Contig_129:271267..272803+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9860 ID=mRNA_9860|Name=jgi.p|Trimin1|352724|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1537bp|location=Sequence derived from alignment at Contig_129:271267..272803+ (Tribonema minus UTEX_B_3156 )
ATGCTGGATGTGGATGCGTTCAAAGGCTACTTCCTGTCACACAATGCATT CGTGGTACGCGCTGTCGACAGCGGGCACGTCATGGGCGTCTTCTACATCA AGCCAAATTTCCCCGGTCGCTGCAGGTGAGAAGCAACCGGCAAAATTGCC CTGTGCAACCCCACTTCAACCAGCACTTTTAAAGAGACCCGGTGGTACAA AATACTGCTTCAACGACCGTCTATCCTTGCTTTTCGACAATCAGCTGGCC TGGTGTATGCTCAGTGACGCAGATGGTACAGCACTGCAGGCCAGCGTGAA CTGCGCTGGTGGTCCAAATGCTGGTGCCAGCGCACGCAGTGTGCTCACGC CAACGTGTGCACGGCTGATGTTTTCCCCTGCCGGCTTCACTTTGACGCCA CTCACGCTGTCAATGGTGCGCCTTGCCGCAAGCAGCCACATATGCAACGG CGGCTTCATCACAGAGCCCGCTTTCAGGGGGCGCGGAGTGGGGACGCTCA TGGCCAAGGCATTCCTCTGGCTCGCCAGGGACATTGGCTACAAGGCCTCC TACTTCAACCTGGTGAGCGTCGGCCGCAGAGCCGTGCTGCGGTGCCGTCT CACAGAACAATATCTGTGGGTGTCATGTCCTGCCATGCGTGCATGTTCGG TGCTTGTTCGAAGGGCGCCCTTGTTCTGCCGCCCTGATTTATGCCGTTGG CGCCTGCATCTGCCGGTGACCGCACCTCTCCCGGCGCAAGCCGCGCCTGA GATCAAGGATGCTGTGCCTGTTGCACAGCAGCACAAACGGATCGGTGCTA CCCCACACAGCGAATCGACAAGGCAGGAATGATATGCTGCATATGAGTGC ACATGCGCTCCGGGGCTATGCAAGCGCCTGAAGTATCTCGTAATGAAGCT AACACGGCCTTTCGCGGCTGGAATGGACGCAGCTGGCTGAATGAAATCAG CTTAATGTGAAAGAAGCGTGCAGAATGAGCTTGTTTGCAACTGCCAGCAG CACCTCATAGGCTGTCACCAAGCTCGCGGATTATCCTATGATGCGTGCTG GCACAGCGGACGTATGACAGCGGTGCCCATCGAGCTAAAGGCAGTCAGCA TGCTGCCTCCCTTTCACGTGTCCTGCTGTCCGACAGCACAAACACTGCTA CAATGCGTGCGCGCCAGCTTTGAGTGCGATTTGCTGGCTCCCAATTATCT GTCTACCAGTGACCCCACCAGTGCATTATTGATGTTGAAGTTGCACCTTC AAAAATGTGAGAGGGCGATGCTGACCTACGCTGCGTGTTGGTGTGCACGC AGGTGTTCGCCAACAATGCAGCGAGTCAGGCGCTCTGGGACGGTCTCGGC TTCACGCGCCTGGCGGTGGTGCCCAAGGCGGGACGCTTGAAAGGCGTCGA CGGCCTCGTGGACGCCATTCAGTACTACTACGACCTGGAGAGCCTGAGAG ACGCAGACAACTTCCTGCGCACGCTCAGCTCGGAAGCAGAAGCGTAGCTC GGCACAGCCGGCACAATGTATTTGAACATGTACATGT
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Coding sequence (CDS) from alignment at Contig_129:271267..272803+

>mRNA_9860 ID=mRNA_9860|Name=jgi.p|Trimin1|352724|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=447bp|location=Sequence derived from alignment at Contig_129:271267..272803+ (Tribonema minus UTEX_B_3156 )
ATGCTGGATGTGGATGCGTTCAAAGGCTACTTCCTGTCACACAATGCATT
CGTGGTACGCGCTGTCGACAGCGGGCACGTCATGGGCGTCTTCTACATCA
AGCCAAATTTCCCCGGTCGCTGCAGCCACATATGCAACGGCGGCTTCATC
ACAGAGCCCGCTTTCAGGGGGCGCGGAGTGGGGACGCTCATGGCCAAGGC
ATTCCTCTGGCTCGCCAGGGACATTGGCTACAAGGCCTCCTACTTCAACC
TGGTGTTCGCCAACAATGCAGCGAGTCAGGCGCTCTGGGACGGTCTCGGC
TTCACGCGCCTGGCGGTGGTGCCCAAGGCGGGACGCTTGAAAGGCGTCGA
CGGCCTCGTGGACGCCATTCAGTACTACTACGACCTGGAGAGCCTGAGAG
ACGCAGACAACTTCCTGCGCACGCTCAGCTCGGAAGCAGAAGCGTAG
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