mRNA_9821 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A836CM88_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM88_9STRA) HSP 1 Score: 315 bits (807), Expect = 8.140e-109 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1
Query: 1 VWITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSASTHTLSNYPSALQKKVTLLTHFRSFLFTQERRAGRTATAAPAPSSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYVARDG 471
VWITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSASTHTLSNYPSALQKKVTLLTHFRSFLFTQERRAGRTATAAPAPSSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYVARDG
Sbjct: 1 VWITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSASTHTLSNYPSALQKKVTLLTHFRSFLFTQERRAGRTATAAPAPSSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYVARDG 157
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A7S1TZU1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZU1_9STRA) HSP 1 Score: 149 bits (377), Expect = 3.550e-42 Identity = 89/183 (48.63%), Postives = 112/183 (61.20%), Query Frame = 1
Query: 1 VWITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSASTHTLSNYPSALQKKVTLLTHFRSFLFTQERRAGRTATAA------------------------PAP--SSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYVARDG 471
VW++++VDY SKYG+GFLLN GS+GVYFND+TK+VL+PAG RF Y ER P S L A + + YP+ LQKKVTLL HF S+L QE+ G+ A PA + LV +KK+V TR+A LFRLSN T+QV+F D SEVL+ GA AVTYV + G
Sbjct: 12 VWVSRFVDYTSKYGLGFLLNNGSSGVYFNDSTKIVLNPAGTRFAYVERRRHTPKGSEHL-AHYYGIDAYPADLQKKVTLLKHFHSYLLEQEKSEGKEVAAGAXXXXXXXXXXXXXXXXXXXXXXXPAEDVADADLVFLKKWVRTRHAILFRLSNRTVQVVFFDQSEVLLSAGAAAVTYVDKQG 193
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A6H5KRH8_9PHAE (Serine/threonine-protein kinase PLK n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRH8_9PHAE) HSP 1 Score: 145 bits (367), Expect = 1.620e-37 Identity = 83/177 (46.89%), Postives = 112/177 (63.28%), Query Frame = 1
Query: 1 VWITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSAS-------THTLSNYPSALQKKVTLLTHFRSFLFTQERR-----AGRT--------ATAAPAPSSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYVARDG 471
VW+T+YVDY +KYG+GFLL+ GSAGVYFNDATK+VL+PAG FEY ER+ +SS + HTL ++P LQKKVTLL HFR +L ++ AG + A +A +EPL ++K++ TR A LFRLSN T+QV+F D +E+L+ A VT+V + G
Sbjct: 890 VWVTRYVDYSTKYGLGFLLSDGSAGVYFNDATKIVLEPAGVAFEYIERTRRSTSSSPASGGTGDQPPRARHTLEDFPPELQKKVTLLNHFRGYLHELVKKGKDGGAGGSSGEGNEEEAVSAQGEGAEPLTFLRKWLRTRNAILFRLSNRTVQVVFADHTEILLSNEARVVTFVDKHG 1066
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: K0R3I7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R3I7_THAOC) HSP 1 Score: 140 bits (353), Expect = 3.420e-36 Identity = 76/168 (45.24%), Postives = 105/168 (62.50%), Query Frame = 1
Query: 4 WITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSASTHTLSNYPS-ALQKKVTLLTHFRSFLFTQERRAGRTATAAPAPSSE------------PLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYVARD 468
W+T+YVDY SKYG+GFLLN GS+GVYFND+TK V F Y ER A + +T+++YP AL+KKVTLL HFR++L Q+++A + + P S P+V +KK++ T++A LFRLSNGT+QV+F D +EVLI +TYV +D
Sbjct: 349 WVTRYVDYTSKYGLGFLLNDGSSGVYFNDSTKAVHSATNDEFIYIERRKAGADGQVKEPVAIYTVNDYPQDALKKKVTLLQHFRNYLVEQQKQAEKKGESPPLSPSNFDARQDDDENGVPMVFMKKWIKTKHAMLFRLSNGTVQVLFYDSTEVLISSEGRLITYVDKD 516
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: Q22DA7_TETTS (Serine/threonine-protein kinase PLK n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q22DA7_TETTS) HSP 1 Score: 141 bits (356), Expect = 4.890e-36 Identity = 74/158 (46.84%), Postives = 108/158 (68.35%), Query Frame = 1
Query: 1 VWITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSASTHTLSNYPSALQKKVTLLTHFRSFLFTQERRAGRTATAAPAPSSEPL---VHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYVAR 465
+W++++VDY SKYG+G+LLN G AGV+FND+TK++L+P +F+Y ER++ SS + +TL +YP +LQKK+TLL HFRSFL ++++A S EP ++VKK++ T+ A LFRLSN +QVIF D SE+++ AVTYV R
Sbjct: 699 IWVSKWVDYSSKYGLGYLLNNGQAGVFFNDSTKIILNPKTEQFDYIERNS----SSKQDFGAEYTLKDYPESLQKKLTLLQHFRSFLEGEDKKADSIKMPQNEASGEPKSSKIYVKKWLRTKNAILFRLSNKVVQVIFQDSSEIILSSELRAVTYVNR 852
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: B8C1H9_THAPS (Serine/threonine-protein kinase PLK (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1H9_THAPS) HSP 1 Score: 140 bits (352), Expect = 5.070e-36 Identity = 76/165 (46.06%), Postives = 108/165 (65.45%), Query Frame = 1
Query: 4 WITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSASTHTLSNYP-SALQKKVTLLTHFRSFLFTQERRAGRTATAAPAP---------SSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYVARD 468
W+T+YVDY SKYG+GFLLN G +GVYFND+TK V+ + +F Y ER + +TL++YP S+L+KKVTLL HFRS+L Q++RA T + P S P+V++KK++ T++A LFRLSNGT+QV+F D +EVLI +T+V ++
Sbjct: 363 WVTRYVDYTSKYGLGFLLNDGCSGVYFNDSTKAVISSSDDKFVYVERRK----EGNTEPVANYTLTDYPESSLKKKVTLLQHFRSYLAEQQKRAEETGESEPLTGTFEERQDSSDAPMVYMKKWIRTKHAMLFRLSNGTVQVLFYDLTEVLISSEGKLITFVDKE 523
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A7S2MEK7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MEK7_9STRA) HSP 1 Score: 133 bits (334), Expect = 7.330e-36 Identity = 79/184 (42.93%), Postives = 108/184 (58.70%), Query Frame = 1
Query: 1 VWITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERS-------AAPPASSALLSASTHTLSNYPSALQKKVTLLTHFRSFLFTQERRAGRTATAAP-------------------------APSSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTY 456
VW+T +VDY SKYG+G L+ GS GVYFND+TK+ LDP G+RF Y ER+ A SS + +T + YP L+KKVTLL HFR +L E+ + + A+A+ AP+ E LV+VKK+V T++A LFRLSN T+QVIFTD +E+++ A VT+
Sbjct: 16 VWVTLHVDYTSKYGIGVRLSNGSTGVYFNDSTKITLDPEGYRFLYVERARYGDLDLAVGERSSPAEKSDEYTTAVYPDGLRKKVTLLHHFREYL---EKESHKQASASVDKASEGLVIEAMEKRIHLWPRDAWNAPAKEELVYVKKFVRTKHAILFRLSNSTVQVIFTDCTEIILSSEARVVTF 196
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A7S0KZ24_9STRA (Serine/threonine-protein kinase PLK n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KZ24_9STRA) HSP 1 Score: 139 bits (351), Expect = 2.150e-35 Identity = 76/163 (46.63%), Postives = 105/163 (64.42%), Query Frame = 1
Query: 4 WITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWER----SAAPPASSALLSASTHTLSNYPSALQKKVTLLTHFRSFLFTQERRAGRTATAAPAPSSE-------PLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYV 459
W+T+YVDY SKYG+GFLLN GS+GVYFND+TK VL+ G F+Y ER S + THTLS +P +LQKKVTL+ HFR++L Q++RA + E PLV++KK+V T++A +FRLSN T+Q++F D +E+L+ +TYV
Sbjct: 630 WVTRYVDYTSKYGLGFLLNDGSSGVYFNDSTKAVLESDGEMFQYIERRKTSSETEEGRRPEPTVETHTLSAFPDSLQKKVTLVKHFRNYLLEQQKRAEDEGSEDLVCLDELCADPLAPLVYLKKWVRTKHAIVFRLSNHTIQIVFYDQTEILLTSDDRFITYV 792
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A7S3USX9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USX9_HETAK) HSP 1 Score: 130 bits (327), Expect = 5.570e-35 Identity = 77/177 (43.50%), Postives = 106/177 (59.89%), Query Frame = 1
Query: 1 VWITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSASTHTLSNYPSALQKKVTLLTHFRSFLFTQERRA---GRT-----------------ATAAPAPSSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYVARDG 471
+W+ +YVDY SKYG+GFLL+ GSAGVYFNDATK+V P+G F+Y ER+ + ++ + H YP+ L KKVTLL HF ++L QE+R GR+ A P S LV+VKK+V TR+A LFRLS+ T+QV F D +E+ + A AV ++ + G
Sbjct: 12 LWVVRYVDYTSKYGLGFLLSNGSAGVYFNDATKIVAAPSGRYFDYVERAR---GGARDVTVARHEADRYPADLNKKVTLLNHFSNYLIQQEKRKREEGRSHLPVSVNLDAREKNPDGEEEAAGPGS--LVYVKKWVKTRHAILFRLSSRTVQVTFFDQTEITLSSEARAVMFIDKTG 183
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A7S2PHT8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PHT8_9STRA) HSP 1 Score: 134 bits (338), Expect = 2.310e-34 Identity = 79/168 (47.02%), Postives = 105/168 (62.50%), Query Frame = 1
Query: 4 WITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSASTHTLSN--YPSALQKKVTLLTHFRSFLFTQERRAGRTATA--------------APAPSSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYV 459
W+++YVDY SKYG+GFLLN GS+GV FND+TK VL P F Y ER + ++ + HTLSN YP AL+KKV LL HFR++L Q+++ +T T A E V+VKK+V TR+A LFRLS+ T+QV+F D +EV++ GA VTYV
Sbjct: 239 WVSRYVDYTSKYGLGFLLNDGSSGVCFNDSTKAVLSPNNDTFHYIERRRSHQSN---VIPEHHTLSNHNYPEALEKKVLLLKHFRNYLMEQQKKHEQTQTQTSDRTKENTDTDDNAGEDVEEDPVYVKKWVRTRHAILFRLSDRTVQVVFFDHTEVILSAGARLVTYV 403
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A836CB25_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB25_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.220e-37 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1
Query: 1 PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIRELGCPMWTD 177
PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIRELGCPMWTD
Sbjct: 1 PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIRELGCPMWTD 59
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A835YXV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXV6_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.390e-20 Identity = 44/52 (84.62%), Postives = 46/52 (88.46%), Query Frame = 1
Query: 1 PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIREL 156
PWGTSTVKLACD GH A WLIN+NCP DDTVAVSAAAQGSVPLLTR+REL
Sbjct: 268 PWGTSTVKLACDNGHLAIAAWLINHNCPVDDTVAVSAAAQGSVPLLTRLREL 319
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A836CB53_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB53_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.270e-18 Identity = 39/51 (76.47%), Postives = 44/51 (86.27%), Query Frame = 1
Query: 1 PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIRE 153
PWG+STVK ACD GHH A WLI+N+CP DDTVAVSAAAQG+VPLL R+RE
Sbjct: 30 PWGSSTVKSACDHGHHGIAEWLIDNDCPVDDTVAVSAAAQGNVPLLRRLRE 80
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A836CAH4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAH4_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 3.140e-11 Identity = 30/59 (50.85%), Postives = 32/59 (54.24%), Query Frame = 1
Query: 1 PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIRELGCPMWTD 177
PWGT TVKLAC+KGH DTAMWL N+NCP L CPMWTD
Sbjct: 24 PWGTGTVKLACEKGHRDTAMWLFNHNCP-----------------------LRCPMWTD 59 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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BLAST of jgi.p|Trimin1|153157 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9821 ID=mRNA_9821|Name=jgi.p|Trimin1|153157|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=471bp|location=Sequence derived from alignment at Contig_129:53479..54180- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GTGTGGATCACGCAGTACGTCGACTACTGCAGCAAGTACGGCGTGGGCTTback to top protein sequence of jgi.p|Trimin1|153157 >Trimin1|153157|gw1.129.109.1 ID=Trimin1|153157|gw1.129.109.1|Name=jgi.p|Trimin1|153157|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=157bp VWITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAback to top mRNA from alignment at Contig_129:53479..54180- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9821 ID=mRNA_9821|Name=jgi.p|Trimin1|153157|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=702bp|location=Sequence derived from alignment at Contig_129:53479..54180- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_129:53479..54180- >mRNA_9821 ID=mRNA_9821|Name=jgi.p|Trimin1|153157|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=471bp|location=Sequence derived from alignment at Contig_129:53479..54180- (Tribonema minus UTEX_B_3156 )back to top |