mRNA_9821 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|153157
Unique NamemRNA_9821
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A836CM88_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM88_9STRA)

HSP 1 Score: 315 bits (807), Expect = 8.140e-109
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1
Query:    1 VWITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSASTHTLSNYPSALQKKVTLLTHFRSFLFTQERRAGRTATAAPAPSSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYVARDG 471
            VWITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSASTHTLSNYPSALQKKVTLLTHFRSFLFTQERRAGRTATAAPAPSSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYVARDG
Sbjct:    1 VWITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSASTHTLSNYPSALQKKVTLLTHFRSFLFTQERRAGRTATAAPAPSSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYVARDG 157          
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A7S1TZU1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZU1_9STRA)

HSP 1 Score: 149 bits (377), Expect = 3.550e-42
Identity = 89/183 (48.63%), Postives = 112/183 (61.20%), Query Frame = 1
Query:    1 VWITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSASTHTLSNYPSALQKKVTLLTHFRSFLFTQERRAGRTATAA------------------------PAP--SSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYVARDG 471
            VW++++VDY SKYG+GFLLN GS+GVYFND+TK+VL+PAG RF Y ER    P  S  L A  + +  YP+ LQKKVTLL HF S+L  QE+  G+   A                         PA   +   LV +KK+V TR+A LFRLSN T+QV+F D SEVL+  GA AVTYV + G
Sbjct:   12 VWVSRFVDYTSKYGLGFLLNNGSSGVYFNDSTKIVLNPAGTRFAYVERRRHTPKGSEHL-AHYYGIDAYPADLQKKVTLLKHFHSYLLEQEKSEGKEVAAGAXXXXXXXXXXXXXXXXXXXXXXXPAEDVADADLVFLKKWVRTRHAILFRLSNRTVQVVFFDQSEVLLSAGAAAVTYVDKQG 193          
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A6H5KRH8_9PHAE (Serine/threonine-protein kinase PLK n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRH8_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 1.620e-37
Identity = 83/177 (46.89%), Postives = 112/177 (63.28%), Query Frame = 1
Query:    1 VWITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSAS-------THTLSNYPSALQKKVTLLTHFRSFLFTQERR-----AGRT--------ATAAPAPSSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYVARDG 471
            VW+T+YVDY +KYG+GFLL+ GSAGVYFNDATK+VL+PAG  FEY ER+    +SS     +        HTL ++P  LQKKVTLL HFR +L    ++     AG +        A +A    +EPL  ++K++ TR A LFRLSN T+QV+F D +E+L+   A  VT+V + G
Sbjct:  890 VWVTRYVDYSTKYGLGFLLSDGSAGVYFNDATKIVLEPAGVAFEYIERTRRSTSSSPASGGTGDQPPRARHTLEDFPPELQKKVTLLNHFRGYLHELVKKGKDGGAGGSSGEGNEEEAVSAQGEGAEPLTFLRKWLRTRNAILFRLSNRTVQVVFADHTEILLSNEARVVTFVDKHG 1066          
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: K0R3I7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R3I7_THAOC)

HSP 1 Score: 140 bits (353), Expect = 3.420e-36
Identity = 76/168 (45.24%), Postives = 105/168 (62.50%), Query Frame = 1
Query:    4 WITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSASTHTLSNYPS-ALQKKVTLLTHFRSFLFTQERRAGRTATAAPAPSSE------------PLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYVARD 468
            W+T+YVDY SKYG+GFLLN GS+GVYFND+TK V       F Y ER  A          + +T+++YP  AL+KKVTLL HFR++L  Q+++A +   + P   S             P+V +KK++ T++A LFRLSNGT+QV+F D +EVLI      +TYV +D
Sbjct:  349 WVTRYVDYTSKYGLGFLLNDGSSGVYFNDSTKAVHSATNDEFIYIERRKAGADGQVKEPVAIYTVNDYPQDALKKKVTLLQHFRNYLVEQQKQAEKKGESPPLSPSNFDARQDDDENGVPMVFMKKWIKTKHAMLFRLSNGTVQVLFYDSTEVLISSEGRLITYVDKD 516          
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: Q22DA7_TETTS (Serine/threonine-protein kinase PLK n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q22DA7_TETTS)

HSP 1 Score: 141 bits (356), Expect = 4.890e-36
Identity = 74/158 (46.84%), Postives = 108/158 (68.35%), Query Frame = 1
Query:    1 VWITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSASTHTLSNYPSALQKKVTLLTHFRSFLFTQERRAGRTATAAPAPSSEPL---VHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYVAR 465
            +W++++VDY SKYG+G+LLN G AGV+FND+TK++L+P   +F+Y ER++    SS     + +TL +YP +LQKK+TLL HFRSFL  ++++A          S EP    ++VKK++ T+ A LFRLSN  +QVIF D SE+++     AVTYV R
Sbjct:  699 IWVSKWVDYSSKYGLGYLLNNGQAGVFFNDSTKIILNPKTEQFDYIERNS----SSKQDFGAEYTLKDYPESLQKKLTLLQHFRSFLEGEDKKADSIKMPQNEASGEPKSSKIYVKKWLRTKNAILFRLSNKVVQVIFQDSSEIILSSELRAVTYVNR 852          
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: B8C1H9_THAPS (Serine/threonine-protein kinase PLK (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1H9_THAPS)

HSP 1 Score: 140 bits (352), Expect = 5.070e-36
Identity = 76/165 (46.06%), Postives = 108/165 (65.45%), Query Frame = 1
Query:    4 WITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSASTHTLSNYP-SALQKKVTLLTHFRSFLFTQERRAGRTATAAPAP---------SSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYVARD 468
            W+T+YVDY SKYG+GFLLN G +GVYFND+TK V+  +  +F Y ER             + +TL++YP S+L+KKVTLL HFRS+L  Q++RA  T  + P           S  P+V++KK++ T++A LFRLSNGT+QV+F D +EVLI      +T+V ++
Sbjct:  363 WVTRYVDYTSKYGLGFLLNDGCSGVYFNDSTKAVISSSDDKFVYVERRK----EGNTEPVANYTLTDYPESSLKKKVTLLQHFRSYLAEQQKRAEETGESEPLTGTFEERQDSSDAPMVYMKKWIRTKHAMLFRLSNGTVQVLFYDLTEVLISSEGKLITFVDKE 523          
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A7S2MEK7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MEK7_9STRA)

HSP 1 Score: 133 bits (334), Expect = 7.330e-36
Identity = 79/184 (42.93%), Postives = 108/184 (58.70%), Query Frame = 1
Query:    1 VWITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERS-------AAPPASSALLSASTHTLSNYPSALQKKVTLLTHFRSFLFTQERRAGRTATAAP-------------------------APSSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTY 456
            VW+T +VDY SKYG+G  L+ GS GVYFND+TK+ LDP G+RF Y ER+       A    SS    +  +T + YP  L+KKVTLL HFR +L   E+ + + A+A+                          AP+ E LV+VKK+V T++A LFRLSN T+QVIFTD +E+++   A  VT+
Sbjct:   16 VWVTLHVDYTSKYGIGVRLSNGSTGVYFNDSTKITLDPEGYRFLYVERARYGDLDLAVGERSSPAEKSDEYTTAVYPDGLRKKVTLLHHFREYL---EKESHKQASASVDKASEGLVIEAMEKRIHLWPRDAWNAPAKEELVYVKKFVRTKHAILFRLSNSTVQVIFTDCTEIILSSEARVVTF 196          
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A7S0KZ24_9STRA (Serine/threonine-protein kinase PLK n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KZ24_9STRA)

HSP 1 Score: 139 bits (351), Expect = 2.150e-35
Identity = 76/163 (46.63%), Postives = 105/163 (64.42%), Query Frame = 1
Query:    4 WITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWER----SAAPPASSALLSASTHTLSNYPSALQKKVTLLTHFRSFLFTQERRAGRTATAAPAPSSE-------PLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYV 459
            W+T+YVDY SKYG+GFLLN GS+GVYFND+TK VL+  G  F+Y ER    S          +  THTLS +P +LQKKVTL+ HFR++L  Q++RA    +       E       PLV++KK+V T++A +FRLSN T+Q++F D +E+L+      +TYV
Sbjct:  630 WVTRYVDYTSKYGLGFLLNDGSSGVYFNDSTKAVLESDGEMFQYIERRKTSSETEEGRRPEPTVETHTLSAFPDSLQKKVTLVKHFRNYLLEQQKRAEDEGSEDLVCLDELCADPLAPLVYLKKWVRTKHAIVFRLSNHTIQIVFYDQTEILLTSDDRFITYV 792          
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A7S3USX9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USX9_HETAK)

HSP 1 Score: 130 bits (327), Expect = 5.570e-35
Identity = 77/177 (43.50%), Postives = 106/177 (59.89%), Query Frame = 1
Query:    1 VWITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSASTHTLSNYPSALQKKVTLLTHFRSFLFTQERRA---GRT-----------------ATAAPAPSSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYVARDG 471
            +W+ +YVDY SKYG+GFLL+ GSAGVYFNDATK+V  P+G  F+Y ER+      +  ++ + H    YP+ L KKVTLL HF ++L  QE+R    GR+                    A  P S  LV+VKK+V TR+A LFRLS+ T+QV F D +E+ +   A AV ++ + G
Sbjct:   12 LWVVRYVDYTSKYGLGFLLSNGSAGVYFNDATKIVAAPSGRYFDYVERAR---GGARDVTVARHEADRYPADLNKKVTLLNHFSNYLIQQEKRKREEGRSHLPVSVNLDAREKNPDGEEEAAGPGS--LVYVKKWVKTRHAILFRLSSRTVQVTFFDQTEITLSSEARAVMFIDKTG 183          
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A7S2PHT8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PHT8_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.310e-34
Identity = 79/168 (47.02%), Postives = 105/168 (62.50%), Query Frame = 1
Query:    4 WITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSAAPPASSALLSASTHTLSN--YPSALQKKVTLLTHFRSFLFTQERRAGRTATA--------------APAPSSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAVTYV 459
            W+++YVDY SKYG+GFLLN GS+GV FND+TK VL P    F Y ER  +  ++   +    HTLSN  YP AL+KKV LL HFR++L  Q+++  +T T               A     E  V+VKK+V TR+A LFRLS+ T+QV+F D +EV++  GA  VTYV
Sbjct:  239 WVSRYVDYTSKYGLGFLLNDGSSGVCFNDSTKAVLSPNNDTFHYIERRRSHQSN---VIPEHHTLSNHNYPEALEKKVLLLKHFRNYLMEQQKKHEQTQTQTSDRTKENTDTDDNAGEDVEEDPVYVKKWVRTRHAILFRLSDRTVQVVFFDHTEVILSAGARLVTYV 403          
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A836CB25_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB25_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.220e-37
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1
Query:    1 PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIRELGCPMWTD 177
            PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIRELGCPMWTD
Sbjct:    1 PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIRELGCPMWTD 59          
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A835YXV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXV6_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.390e-20
Identity = 44/52 (84.62%), Postives = 46/52 (88.46%), Query Frame = 1
Query:    1 PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIREL 156
            PWGTSTVKLACD GH   A WLIN+NCP DDTVAVSAAAQGSVPLLTR+REL
Sbjct:  268 PWGTSTVKLACDNGHLAIAAWLINHNCPVDDTVAVSAAAQGSVPLLTRLREL 319          
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A836CB53_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB53_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.270e-18
Identity = 39/51 (76.47%), Postives = 44/51 (86.27%), Query Frame = 1
Query:    1 PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIRE 153
            PWG+STVK ACD GHH  A WLI+N+CP DDTVAVSAAAQG+VPLL R+RE
Sbjct:   30 PWGSSTVKSACDHGHHGIAEWLIDNDCPVDDTVAVSAAAQGNVPLLRRLRE 80          
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Match: A0A836CAH4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAH4_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.140e-11
Identity = 30/59 (50.85%), Postives = 32/59 (54.24%), Query Frame = 1
Query:    1 PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIRELGCPMWTD 177
            PWGT TVKLAC+KGH DTAMWL N+NCP                       L CPMWTD
Sbjct:   24 PWGTGTVKLACEKGHRDTAMWLFNHNCP-----------------------LRCPMWTD 59          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|153157 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CM88_9STRA8.140e-109100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S1TZU1_9STRA3.550e-4248.63Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6H5KRH8_9PHAE1.620e-3746.89Serine/threonine-protein kinase PLK n=2 Tax=Ectoca... [more]
K0R3I7_THAOC3.420e-3645.24Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
Q22DA7_TETTS4.890e-3646.84Serine/threonine-protein kinase PLK n=1 Tax=Tetrah... [more]
B8C1H9_THAPS5.070e-3646.06Serine/threonine-protein kinase PLK (Fragment) n=1... [more]
A0A7S2MEK7_9STRA7.330e-3642.93Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0KZ24_9STRA2.150e-3546.63Serine/threonine-protein kinase PLK n=1 Tax=Asteri... [more]
A0A7S3USX9_HETAK5.570e-3543.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2PHT8_9STRA2.310e-3447.02Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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BLAST of jgi.p|Trimin1|153157 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836CB25_9STRA1.220e-37100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YXV6_9STRA1.390e-2084.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CB53_9STRA1.270e-1876.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CAH4_9STRA3.140e-1150.85Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_129contigContig_129:53479..54180 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|153157|gw1.129.109.1
BRITEko00000,ko00001,ko01000,ko01001,ko03036,ko03400
KEGG Pathwayko04068,ko04110,ko04111,ko04113,ko04114,ko04914,ko05152,map04068,map04110,map04111,map04113,map04114,map04914,map05152
KEGG koko:K06631,ko:K06660,ko:K08861,ko:K08862,ko:K19596
EC2.7.11.21
GOsGO:0000003,GO:0000070,GO:0000075,GO:0000077,GO:0000079,GO:0000082,GO:0000086,GO:0000122,GO:0000166,GO:0000212,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000281,GO:0000287,GO:0000302,GO:0000712,GO:0000741,GO:0000775,GO:0000776,GO:0000777,GO:0000778,GO:0000779,GO:0000780,GO:0000785,GO:0000793,GO:0000794,GO:0000795,GO:0000819,GO:0000910,GO:0000912,GO:0000915,GO:0000922,GO:0000940,GO:0000942,GO:0001578,GO:0001666,GO:0001932,GO:0001933,GO:0001934,GO:0002039,GO:0002347,GO:0002357,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005694,GO:0005730,GO:0005737,GO:0005794,GO:0005795,GO:0005813,GO:0005814,GO:0005815,GO:0005816,GO:0005819,GO:0005828,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005933,GO:0005935,GO:0006139,GO:0006259,GO:0006310,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006469,GO:0006508,GO:0006511,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006915,GO:0006950,GO:0006952,GO:0006970,GO:0006974,GO:0006977,GO:0006979,GO:0006996,GO:0006997,GO:0006998,GO:0007010,GO:0007017,GO:0007020,GO:0007030,GO:0007049,GO:0007051,GO:0007052,GO:0007056,GO:0007058,GO:0007059,GO:0007062,GO:0007077,GO:0007080,GO:0007088,GO:0007093,GO:0007094,GO:0007096,GO:0007097,GO:0007098,GO:0007112,GO:0007113,GO:0007127,GO:0007131,GO:0007135,GO:0007140,GO:0007143,GO:0007147,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007338,GO:0007344,GO:0007346,GO:0007399,GO:0007406,GO:0007507,GO:0007584,GO:0007610,GO:0007611,GO:0007613,GO:0008017,GO:0008047,GO:0008092,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008283,GO:0008285,GO:0008361,GO:0008608,GO:0009056,GO:0009057,GO:0009314,GO:0009566,GO:0009605,GO:0009607,GO:0009628,GO:0009790,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0009994,GO:0010033,GO:0010256,GO:0010389,GO:0010458,GO:0010468,GO:0010498,GO:0010506,GO:0010508,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010564,GO:0010594,GO:0010595,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010632,GO:0010634,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010695,GO:0010696,GO:0010720,GO:0010721,GO:0010799,GO:0010800,GO:0010824,GO:0010941,GO:0010948,GO:0010965,GO:0010971,GO:0010973,GO:0010975,GO:0010976,GO:0010977,GO:0010997,GO:0012501,GO:0012505,GO:0015630,GO:0015631,GO:0016043,GO:0016301,GO:0016310,GO:0016321,GO:0016525,GO:0016567,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019237,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0019941,GO:0019953,GO:0022008,GO:0022402,GO:0022406,GO:0022411,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030071,GO:0030154,GO:0030162,GO:0030163,GO:0030234,GO:0030330,GO:0030334,GO:0030335,GO:0030397,GO:0030425,GO:0030427,GO:0030496,GO:0030554,GO:0030725,GO:0030726,GO:0030865,GO:0030866,GO:0030953,GO:0030954,GO:0031023,GO:0031029,GO:0031031,GO:0031032,GO:0031109,GO:0031122,GO:0031145,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031344,GO:0031345,GO:0031346,GO:0031396,GO:0031398,GO:0031399,GO:0031400,GO:0031401,GO:0031570,GO:0031571,GO:0031572,GO:0031577,GO:0031647,GO:0031648,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0031991,GO:0032092,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032388,GO:0032434,GO:0032436,GO:0032446,GO:0032465,GO:0032467,GO:0032486,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0032886,GO:0032954,GO:0032955,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033157,GO:0033206,GO:0033365,GO:0033554,GO:0033673,GO:0034086,GO:0034090,GO:0034248,GO:0034250,GO:0034451,GO:0034502,GO:0034504,GO:0034613,GO:0034622,GO:0034641,GO:0035044,GO:0035046,GO:0035050,GO:0035295,GO:0035556,GO:0035639,GO:0035825,GO:0035875,GO:0036094,GO:0036211,GO:0036293,GO:0036294,GO:0036477,GO:0040012,GO:0040017,GO:0040020,GO:0040038,GO:0042127,GO:0042176,GO:0042221,GO:0042325,GO:0042326,GO:0042327,GO:0042770,GO:0042802,GO:0042981,GO:0042995,GO:0043005,GO:0043008,GO:0043025,GO:0043062,GO:0043063,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043086,GO:0043161,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043393,GO:0043412,GO:0043491,GO:0043535,GO:0043536,GO:0043549,GO:0043565,GO:0043632,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044297,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044431,GO:0044444,GO:0044446,GO:0044450,GO:0044454,GO:0044463,GO:0044464,GO:0044703,GO:0044732,GO:0044770,GO:0044772,GO:0044773,GO:0044774,GO:0044782,GO:0044783,GO:0044819,GO:0044837,GO:0044839,GO:0044843,GO:0044877,GO:0045132,GO:0045143,GO:0045144,GO:0045165,GO:0045184,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045666,GO:0045732,GO:0045736,GO:0045765,GO:0045766,GO:0045786,GO:0045787,GO:0045793,GO:0045839,GO:0045840,GO:0045841,GO:0045842,GO:0045859,GO:0045862,GO:0045892,GO:0045893,GO:0045930,GO:0045931,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0045944,GO:0046483,GO:0046578,GO:0046579,GO:0046599,GO:0046605,GO:0046677,GO:0046785,GO:0046822,GO:0046824,GO:0046825,GO:0046827,GO:0046872,GO:0046907,GO:0048167,GO:0048168,GO:0048169,GO:0048232,GO:0048284,GO:0048285,GO:0048308,GO:0048313,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048568,GO:0048583,GO:0048584,GO:0048585,GO:0048600,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050000,GO:0050767,GO:0050768,GO:0050769,GO:0050773,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050804,GO:0050805,GO:0050806,GO:0050877,GO:0050890,GO:0050896,GO:0051049,GO:0051050,GO:0051056,GO:0051057,GO:0051081,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051177,GO:0051179,GO:0051219,GO:0051222,GO:0051223,GO:0051225,GO:0051233,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051255,GO:0051257,GO:0051258,GO:0051270,GO:0051272,GO:0051276,GO:0051301,GO:0051302,GO:0051303,GO:0051304,GO:0051307,GO:0051310,GO:0051315,GO:0051316,GO:0051321,GO:0051338,GO:0051347,GO:0051348,GO:0051418,GO:0051438,GO:0051443,GO:0051445,GO:0051455,GO:0051493,GO:0051495,GO:0051603,GO:0051640,GO:0051641,GO:0051647,GO:0051649,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0051754,GO:0051781,GO:0051783,GO:0051784,GO:0051785,GO:0051960,GO:0051961,GO:0051962,GO:0051983,GO:0051984,GO:0051985,GO:0051987,GO:0051988,GO:0060236,GO:0060255,GO:0060271,GO:0060284,GO:0060291,GO:0060292,GO:0060341,GO:0060429,GO:0060548,GO:0060631,GO:0060998,GO:0061000,GO:0061024,GO:0061136,GO:0061640,GO:0061982,GO:0061983,GO:0062033,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070192,GO:0070193,GO:0070194,GO:0070201,GO:0070482,GO:0070507,GO:0070601,GO:0070647,GO:0070727,GO:0070848,GO:0070887,GO:0070925,GO:0071156,GO:0071158,GO:0071168,GO:0071173,GO:0071174,GO:0071310,GO:0071363,GO:0071453,GO:0071456,GO:0071496,GO:0071704,GO:0071840,GO:0071865,GO:0071866,GO:0071900,GO:0071901,GO:0072091,GO:0072331,GO:0072359,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072425,GO:0072431,GO:0072686,GO:0080090,GO:0080134,GO:0080135,GO:0090049,GO:0090050,GO:0090066,GO:0090068,GO:0090087,GO:0090166,GO:0090169,GO:0090224,GO:0090235,GO:0090304,GO:0090306,GO:0090316,GO:0090342,GO:0090344,GO:0090435,GO:0097159,GO:0097367,GO:0097431,GO:0097435,GO:0097447,GO:0097458,GO:0097711,GO:0098687,GO:0098772,GO:0098791,GO:0098813,GO:0099080,GO:0099081,GO:0099086,GO:0099177,GO:0099512,GO:0099513,GO:0110020,GO:0120025,GO:0120031,GO:0120035,GO:0120036,GO:0120038,GO:0140013,GO:0140014,GO:0140056,GO:0140096,GO:1900180,GO:1900182,GO:1901265,GO:1901342,GO:1901343,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901673,GO:1901700,GO:1901796,GO:1901800,GO:1901891,GO:1901893,GO:1901970,GO:1901987,GO:1901988,GO:1901989,GO:1901990,GO:1901991,GO:1901992,GO:1902099,GO:1902100,GO:1902101,GO:1902115,GO:1902363,GO:1902400,GO:1902402,GO:1902403,GO:1902412,GO:1902423,GO:1902425,GO:1902531,GO:1902533,GO:1902542,GO:1902679,GO:1902680,GO:1902692,GO:1902749,GO:1902750,GO:1902751,GO:1902806,GO:1902807,GO:1902850,GO:1903008,GO:1903046,GO:1903047,GO:1903050,GO:1903052,GO:1903320,GO:1903322,GO:1903353,GO:1903362,GO:1903364,GO:1903436,GO:1903438,GO:1903490,GO:1903506,GO:1903507,GO:1903508,GO:1903670,GO:1903672,GO:1903827,GO:1903829,GO:1904018,GO:1904029,GO:1904030,GO:1904666,GO:1904668,GO:1904714,GO:1904716,GO:1904951,GO:1905818,GO:1905819,GO:1905820,GO:1990023,GO:1990813,GO:1990837,GO:2000026,GO:2000045,GO:2000058,GO:2000060,GO:2000112,GO:2000113,GO:2000134,GO:2000145,GO:2000147,GO:2000171,GO:2000177,GO:2000178,GO:2000181,GO:2000241,GO:2000647,GO:2000772,GO:2000773,GO:2000777,GO:2000816,GO:2001141,GO:2001251,GO:2001252
Preferred namePLK1
Descriptionregulation of centriole replication
COG categoryT
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0575@1|root,KOG0575@2759|Eukaryota
Evalue4.81e-38
Seed ortholog2880.D8LFY9
Hectar predicted targeting categoryother localisation
TranscriptId153479
TrackFilteredModels1
ProteinId153157
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|153157gene_9821Tribonema minus UTEX_B_3156 geneContig_129 53479..54180 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|153157Trimin1|153157|gw1.129.109.1Tribonema minus UTEX_B_3156 polypeptideContig_129 53479..54180 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9821_3exon_9821_3Tribonema minus UTEX_B_3156 exonContig_129 53479..53660 -
exon_9821_2exon_9821_2Tribonema minus UTEX_B_3156 exonContig_129 53709..53811 -
exon_9821_1exon_9821_1Tribonema minus UTEX_B_3156 exonContig_129 53995..54180 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9821CDS_9821Tribonema minus UTEX_B_3156 CDSContig_129 53995..54180 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9821 ID=mRNA_9821|Name=jgi.p|Trimin1|153157|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=471bp|location=Sequence derived from alignment at Contig_129:53479..54180- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GTGTGGATCACGCAGTACGTCGACTACTGCAGCAAGTACGGCGTGGGCTT
CCTGCTCAACACGGGCAGCGCGGGCGTGTACTTTAACGACGCCACCAAGA
TGGTGCTCGATCCCGCGGGCCACAGGTTTGAGTACTGGGAGAGGTCGGCC
GCGCCGCCGGCGTCGTCGGCGCTGCTGTCCGCATCGACGCACACGCTGAG
CAACTACCCCTCGGCGCTGCAGAAGAAGGTGACGCTGCTGACGCACTTCC
GGAGCTTCCTCTTCACGCAGGAGCGCAGGGCGGGGCGCACGGCGACGGCG
GCGCCGGCCCCCTCCAGCGAGCCGCTCGTGCACGTCAAAAAGTACGTCGC
GACGCGCTACGCGTGGCTGTTCCGCCTGAGCAACGGCACGCTGCAGGTCA
TCTTCACGGACGGCTCGGAGGTGCTCATCGGGCGCGGCGCGCACGCCGTC
ACGTACGTCGCGCGCGACGGC
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protein sequence of jgi.p|Trimin1|153157

>Trimin1|153157|gw1.129.109.1 ID=Trimin1|153157|gw1.129.109.1|Name=jgi.p|Trimin1|153157|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=157bp
VWITQYVDYCSKYGVGFLLNTGSAGVYFNDATKMVLDPAGHRFEYWERSA
APPASSALLSASTHTLSNYPSALQKKVTLLTHFRSFLFTQERRAGRTATA
APAPSSEPLVHVKKYVATRYAWLFRLSNGTLQVIFTDGSEVLIGRGAHAV
TYVARDG
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mRNA from alignment at Contig_129:53479..54180-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9821 ID=mRNA_9821|Name=jgi.p|Trimin1|153157|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=702bp|location=Sequence derived from alignment at Contig_129:53479..54180- (Tribonema minus UTEX_B_3156 )
GTGTGGATCACGCAGTACGTCGACTACTGCAGCAAGTACGGCGTGGGCTT CCTGCTCAACACGGGCAGCGCGGGCGTGTACTTTAACGACGCCACCAAGA TGGTGCTCGATCCCGCGGGCCACAGGTTTGAGTACTGGGAGAGGTCGGCC GCGCCGCCGGCGTCGTCGGCGCTGCTGTCCGCATCGGTGCAGCAGCAGCT GCGCGGTGCGGACGGCGACATGGAGTTGTCGCCCGCGCGCGCTGGGGGCG CGCCGCAGCGGCACGGCGGCAGCAGCGCAATCAGCGCGGCGGCGGGCAGC ACGATCGCCAGCGGCGTCAGCGCCATGGCGGCAGCGGCAGCGGCGGCGGC GGCGGCGACACCCGTGCAGACGCACACGCTGAGCAACTACCCCTCGGCGC TGCAGAAGAAGGTGACGCTGCTGACGCACTTCCGGAGCTTCCTCTTCACG CAGGAGCGCAGGGCGGGGCGCAGTGGCGGCGCGCAGCAGCAGCGCGTGGC GGCGGCGGCAGCGGCGGCAGCGGCGACGGCGGCGCCGGCCCCCTCCAGCG AGCCGCTCGTGCACGTCAAAAAGTACGTCGCGACGCGCTACGCGTGGCTG TTCCGCCTGAGCAACGGCACGCTGCAGGTCATCTTCACGGACGGCTCGGA GGTGCTCATCGGGCGCGGCGCGCACGCCGTCACGTACGTCGCGCGCGACG GC
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Coding sequence (CDS) from alignment at Contig_129:53479..54180-

>mRNA_9821 ID=mRNA_9821|Name=jgi.p|Trimin1|153157|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=471bp|location=Sequence derived from alignment at Contig_129:53479..54180- (Tribonema minus UTEX_B_3156 )
GTGTGGATCACGCAGTACGTCGACTACTGCAGCAAGTACGGCGTGGGCTT
CCTGCTCAACACGGGCAGCGCGGGCGTGTACTTTAACGACGCCACCAAGA
TGGTGCTCGATCCCGCGGGCCACAGGTTTGAGTACTGGGAGAGGTCGGCC
GCGCCGCCGGCGTCGTCGGCGCTGCTGTCCGCATCGACGCACACGCTGAG
CAACTACCCCTCGGCGCTGCAGAAGAAGGTGACGCTGCTGACGCACTTCC
GGAGCTTCCTCTTCACGCAGGAGCGCAGGGCGGGGCGCACGGCGACGGCG
GCGCCGGCCCCCTCCAGCGAGCCGCTCGTGCACGTCAAAAAGTACGTCGC
GACGCGCTACGCGTGGCTGTTCCGCCTGAGCAACGGCACGCTGCAGGTCA
TCTTCACGGACGGCTCGGAGGTGCTCATCGGGCGCGGCGCGCACGCCGTC
ACGTACGTCGCGCGCGACGGC
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