mRNA_9817 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|15102 vs. uniprot
Match: A0A835ZH41_9STRA (Complex I intermediate-associated protein 30-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH41_9STRA) HSP 1 Score: 875 bits (2262), Expect = 0.000e+0 Identity = 452/452 (100.00%), Postives = 452/452 (100.00%), Query Frame = 2 Query: 35 MTLSRMLKVLLVASTAPACVCGFAFGARVGSGLMAGSHHMTGSWRDPALRQPLSQLRMAEDSDTKTKERQPWEFRRFVRTIAFFNAPRPLAAARNAIRRRGEQGASSALPGGCILVAIGGGDDAATALGQRVTEQLLRRGALVRALVADGKAAAALELIGGGEKRLEVVQSNWEELPSIKPSVLEDVDRAVICAGGAGVDALVKSLKNYGDVQGRKLFSSAPGAVKSWEQWGALDDVVMGGVSTSELVVVPGEGEAGGRSSAAVFRGTVSPANNGGFASVRSRNASPPWDWSQFDALRLRVKGDGFRYKFTVYDAAGWDRPSWSYSFDTAAGEWADVTFPFSALMPIYRTKTMQDPPPLNLSTVYSLQLMLSKFEYDGGLNPTWKPGPFSLSLDSIATVKLGKTGGAVPPAIVILASGGTKAPASGEGVPMTVLDAGQPDAAAKTVDMLLAR 1390 MTLSRMLKVLLVASTAPACVCGFAFGARVGSGLMAGSHHMTGSWRDPALRQPLSQLRMAEDSDTKTKERQPWEFRRFVRTIAFFNAPRPLAAARNAIRRRGEQGASSALPGGCILVAIGGGDDAATALGQRVTEQLLRRGALVRALVADGKAAAALELIGGGEKRLEVVQSNWEELPSIKPSVLEDVDRAVICAGGAGVDALVKSLKNYGDVQGRKLFSSAPGAVKSWEQWGALDDVVMGGVSTSELVVVPGEGEAGGRSSAAVFRGTVSPANNGGFASVRSRNASPPWDWSQFDALRLRVKGDGFRYKFTVYDAAGWDRPSWSYSFDTAAGEWADVTFPFSALMPIYRTKTMQDPPPLNLSTVYSLQLMLSKFEYDGGLNPTWKPGPFSLSLDSIATVKLGKTGGAVPPAIVILASGGTKAPASGEGVPMTVLDAGQPDAAAKTVDMLLAR Sbjct: 1 MTLSRMLKVLLVASTAPACVCGFAFGARVGSGLMAGSHHMTGSWRDPALRQPLSQLRMAEDSDTKTKERQPWEFRRFVRTIAFFNAPRPLAAARNAIRRRGEQGASSALPGGCILVAIGGGDDAATALGQRVTEQLLRRGALVRALVADGKAAAALELIGGGEKRLEVVQSNWEELPSIKPSVLEDVDRAVICAGGAGVDALVKSLKNYGDVQGRKLFSSAPGAVKSWEQWGALDDVVMGGVSTSELVVVPGEGEAGGRSSAAVFRGTVSPANNGGFASVRSRNASPPWDWSQFDALRLRVKGDGFRYKFTVYDAAGWDRPSWSYSFDTAAGEWADVTFPFSALMPIYRTKTMQDPPPLNLSTVYSLQLMLSKFEYDGGLNPTWKPGPFSLSLDSIATVKLGKTGGAVPPAIVILASGGTKAPASGEGVPMTVLDAGQPDAAAKTVDMLLAR 452
BLAST of jgi.p|Trimin1|15102 vs. uniprot
Match: A0A6H5KMW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMW5_9PHAE) HSP 1 Score: 259 bits (662), Expect = 2.410e-74 Identity = 165/414 (39.86%), Postives = 223/414 (53.86%), Query Frame = 2 Query: 188 PLSQLRMAEDSDTKTK-ERQPWEFRRFVRTIAFFNAPR----PLAAARNAIRRRGEQ--------------GASSALPGGCILVAIGGGDDAATALGQRVTEQLLRRGALVRALVADGKAAAALELIGGGEKR----LEVVQSNWEELPSIKPSVLEDVDRAVICAGGA-----------------------------------GVDALVKSLKNYGDVQGRKLFSSAPGAVKSWEQWGALDDVVMGGVSTSELVVVPGEGEAGGRSS------AAVFRGTVSPANNGGFASVRSRNASPPWDWSQFDALRLRVKGDGFRYKFTVYDAAGWDRPSWSYSFDTAAGEWADVTFPFSALMPIYRTKTMQDPPPLNLSTVYSLQLMLSKFEYDGGLNPTWKPGPFSLSLDSIATVKL 1237 P + + + D + + K +R+PWEFRRFV+T+ FF PR P ++ A G L GG +V + G A +G+RV E L ++G VRA+ A K+ A L G E + L+VV +N + S+ PS+ +DV V C G+ LV++ Y D++G+ LF+ P + W QWGALDDVVMGGVS S L VVPG GE +SS AAVF G V +N+GGF S+R+RNASPP D S +DALRLRVKGDG RYKF++YD+ GW+ +W +FDT GEW DV PFS L +RT++++DPPP + +++S QLMLSKFE DG LNP + GPF L+ SI V + Sbjct: 74 PFTIMEASGDGNGEPKAKREPWEFRRFVKTLVFFQGPRRPRLPFSSTARAXXXXXXXXXXXXXXXXXXXXXGLPPFLAGGKGVVLVTG---ATGGVGRRVVELLRQKGVSVRAM-ARNKSKALAMLTEGKETKGGSGLDVVVANIIDKSSLTPSLFKDVAAVVSCTAAIVRPKEGDGPDRAKYFNGITFYEPEVADVPKETEFEGICNLVEAASRYSDIKGKTLFACLPSFQEEWRQWGALDDVVMGGVSESGLRVVPGAGETDAKSSSGSPAAAAVFSGEVKTSNSGGFVSIRTRNASPPLDLSAYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWMDVDIPFSTLKYNFRTESVKDPPPFSPDSIHSFQLMLSKFELDGKLNPNFSAGPFELTTSSIKAVSI 483
BLAST of jgi.p|Trimin1|15102 vs. uniprot
Match: D8LL63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL63_ECTSI) HSP 1 Score: 228 bits (582), Expect = 1.240e-64 Identity = 128/300 (42.67%), Postives = 175/300 (58.33%), Query Frame = 2 Query: 473 VADGKAAAALELIGGGEKR----LEVVQSNWEELPSIKPSVLEDVDRAVICAGGA-----------------------------------GVDALVKSLKNYGDVQGRKLFSSAPGAVKSWEQWGALDDVVMGGVSTSELVVVPGEGE------AGGRSSAAVFRGTVSPANNGGFASVRSRNASPPWDWSQFDALRLRVKGDGFRYKFTVYDAAGWDRPSWSYSFDTAAGEWADVTFPFSALMPIYRTKTMQDPPPLNLSTVYSLQLMLSKFEYDGGLNPTWKPGPFSLSLDSIATVKL 1237 +A K+ A L GG E + L+VV ++ + S+ PS+ +DV V C G+ LV++ Y D++G+ LF+ P + W QWGALDDVVMGGVS S L VVPG GE +G ++AAVF G V +N+GGF S+R+RNASPP D S++DALRLRVKGDG RYKF++YD+ GW+ +W +FDT GEW DV PF+ L +RT++++DPPP + +++ S QLMLSKFE DG LNP + GPF L++ SI V + Sbjct: 1 MARNKSKALAMLTGGKETKGGSGLDVVVADIADKSSLTPSLFKDVAAVVSCTAAIVRPKEGDGPDRAKYFQGITFYEPEVADVPKETEFEGIYNLVEAASRYSDMKGKTLFACLPSFQEGWRQWGALDDVVMGGVSESGLGVVPGAGETDVSSSSGSPAAAAVFSGEVKTSNSGGFVSIRTRNASPPLDLSEYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWIDVDIPFTTLKYNFRTESIKDPPPFSPNSINSFQLMLSKFELDGKLNPNFSAGPFELTIASIKAVSI 300
BLAST of jgi.p|Trimin1|15102 vs. uniprot
Match: A0A7S2UWN3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWN3_9STRA) HSP 1 Score: 227 bits (578), Expect = 8.820e-64 Identity = 140/336 (41.67%), Postives = 184/336 (54.76%), Query Frame = 2 Query: 416 LGQRVTEQLLRRGALVRALVADGKAAAALELIGGGEKR----LEVVQSNWEELPSIKPSVLEDVDRAVICAG-------GAGVDA----------------------------LVKSLKNYGDVQGRKLFSSAPGAVKSWEQWGALDDVVMGGVSTSELVVVPGEGE-AGGRSSAAVFRGTVSPANNGGFASVRSRNASPPWDWSQFDALRLRVKGDGFRYKFTVYDAAGWDRPSWSYSFDTAAGEWADVTFPFSALMPIYRTKTMQDPPPLNLSTVYSLQLMLSKFEYDGGLNPTWKPGPFSLSLDSIATVKLGKTGGAVPPAIVILASGGTKAP 1303 +G+RV + L+++G VRALV + K+ A L G E LE+V + ++ S+K S+ V AV+C G G D +V+ LK +G V+G+ L+ S+PG SW Q+G+LDDVVMGG+S S L VVPG GE A G AAVF G VS NNGGFASVR+RN PP D S FD + +R+KGDG RYK + D WD SW YSFDT AG+W DV PF +P R+ ++ P L + +Y+ Q+ LSKFEYDG LNP + G FSL LDSI + P ++ L+S G P Sbjct: 41 VGKRVADGLMKKGVRVRALVRN-KSKALAYLCNGKEPSPDSLLEIVVGDLTKVESLKASIFRGVQAAVLCHAAIVKPQEGDGPDRAKYFQGIQFYEPEMVDKPMDIDFKGTCNIVEGLKKFGSVEGKVLYGSSPGLQNSWRQFGSLDDVVMGGISKSSLSVVPGAGEEATGSRIAAVFSGEVSTDNNGGFASVRTRNLDPPLDLSSFDGIEMRLKGDGNRYKLMLRDETRWDGISWCYSFDTEAGKWMDVRIPFKDFIPTLRSNSISGGPQLRTTEIYAFQITLSKFEYDGSLNPNFTAGSFSLVLDSIKAYERVSV-----PRVIYLSSAGVTRP 370
BLAST of jgi.p|Trimin1|15102 vs. uniprot
Match: A0A1Z4NLC6_9CYAN (NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 n=1 Tax=Calothrix sp. NIES-3974 TaxID=2005462 RepID=A0A1Z4NLC6_9CYAN) HSP 1 Score: 206 bits (525), Expect = 1.060e-56 Identity = 139/368 (37.77%), Postives = 205/368 (55.71%), Query Frame = 2 Query: 236 ERQPWEFRRFVRTIAFFNAPRPLAAARNAIRRRGEQGASSALPGGC----ILVAIGGGDDAATALGQRVTEQLLRRGALVRALVADGKAAAALELIGGGEKRLEVVQSNWEELPSIKPSVLEDVDRAVICAGGAGVDALVKSLKNYGDVQGRKL--------FSSAPGAVKSWEQWGALDDVVMGGVSTSELVVVPGEGEAGGRSSAAVFRGTVSPANNGGFASVRSRNASPPWDWSQFDALRLRVKGDGFRYKFTVYDAAGWDRPSWSYSFDTAAGEWADVTFPFSALMPIYRTKTMQDPPPLNLSTVYSLQLMLSKFEYDGGLNPTWKPGPFSLSLDSIATVKLGKTGGAVPPAIVILASGGTKAP 1303 +R W+ RFV+T+++F L +N I G+ G + P G +++ IG D LG+ V ++L+ +G R +V + A A +++G + E+V +N ++ S P VL ++ RA+I + + + L+N ++ + L F +++ + WGA+DDVVMGGVS S L + P G +F G VS AN+GGFASVRSRN SPP+D S + ++LRVKGDG RYKF + WD ++SYSFDT A W DV PFS P++R KT+ + PPL+ + SLQLMLSKFEYDG LNP + PG F+L ++SI+ GG P +++ T AP Sbjct: 5 QRSQWDIGRFVQTLSYFEVIPALNWIQNLIT--GKSGDNIKKPDGAKQVGVILVIGATSD----LGKCVVQELVSQGYPTRCVVEN--IATARDILG---QEPELVVANTSDITSFTPLVLNNI-RAIIYCDEKNLPS--QQLENLLNIAQQSLPTPGCLTLFDFTNPSIELKQVWGAVDDVVMGGVSQSNLQITPEGG---------LFAGYVSTANSGGFASVRSRNFSPPFDLSNYAGIQLRVKGDGQRYKFLLRSQTQWDGMAYSYSFDTVADTWIDVKIPFSGFTPVFRAKTVTNAPPLSTQEICSLQLMLSKFEYDGQLNPNFTPGGFALHVESISAY-----GGLHFPQFILVTEPSTTAP 344
BLAST of jgi.p|Trimin1|15102 vs. uniprot
Match: A0A0G4FWF9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FWF9_VITBC) HSP 1 Score: 203 bits (516), Expect = 9.580e-55 Identity = 129/327 (39.45%), Postives = 170/327 (51.99%), Query Frame = 2 Query: 368 GCILVAIGGGDDAATALGQRVTEQLLRRGALVRALVADGKAAAALELIGGGEKRL-----EVVQSNWEELPSIKPSVLEDVDRAVICAGGA-----------------------------------GVDALVKSLKNYGDVQGRKLFSSAPGAVKSWEQWGALDDVVMGGVSTSELVVVPGEGEAG-GRSSAAVFRGTVSPANNGGFASVRSRNASPPWDWSQFDALRLRVKGDGFRYKFTVYDAAGWDRPSWSYSFDTAAGEWADVTFPFSALMPIYRTKTMQDPPP-LNLSTVYSLQLMLSKFEYDGGLNPTWKPGPFSLSLDSI 1222 G +LV G G +G+RV E+L +RG VRA+V + A L GG E L E+ ++ + I+P + DV +IC+ GV +V++ + + + KLFS+ PG +WE WG LDDVVMGGVS S + + PG E G + AAVF G V AN GGF SVR+R PP D S ++ LRLR+KGDG RYK + D AGWD PSW FDT EW V PFS + +R +DP L + +YSLQLMLSKFE+DG LNP++ PG F L + S+ Sbjct: 27 GTVLVVGGTGG-----VGKRVVERLRKRGMRVRAIVRNKSKGLAF-LSGGKEPSLKNDGLEIAAADITKPEEIRPHLFRDVVAVIICSAAIVTPREGDTPDREKYYQGIKFFEPMVVDSPEEVDFRGVQNVVEAAQRFASLDTLKLFSAQPGFHDTWEAWGPLDDVVMGGVSESNIKLEPGAAEPNTGATVAAVFSGEVKTANFGGFVSVRTRKFDPPLDLSAYEGLRLRIKGDGSRYKMQIRDNAGWDSPSWGMGFDTVKDEWVTVDLPFSDFVQNFRNMKTKDPSAKLKTNEIYSLQLMLSKFEFDGELNPSFTPGKFRLVVQSM 347
BLAST of jgi.p|Trimin1|15102 vs. uniprot
Match: A0A350Y1I2_9CYAN (NADH:ubiquinone oxidoreductase n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A350Y1I2_9CYAN) HSP 1 Score: 202 bits (513), Expect = 1.570e-54 Identity = 139/394 (35.28%), Postives = 212/394 (53.81%), Query Frame = 2 Query: 239 RQPWEFRRFVRTIAFFNAPRPLAAARNAIRR---RGEQGASSALPGGCILVAIGGGDDAATALGQRVTEQLLRRGALVRALVADGKAAAALELIGGGEKRLEVVQSNWEELPSIKPSVLEDVDRAVICAGGAGVDAL----------VKSLKNYG----------DVQGRKLFSSA------PGAVKSW----------EQWGALDDVVMGGVSTSELVVVPGEGEAGGRSSAAVFRGTVSPANNGGFASVRSRNASPPWDWSQFDALRLRVKGDGFRYKFTVYDAAGWDRPSWSYSFDTAAGEWADVTFPFSALMPIYRTKTMQDPPPLNLSTVYSLQLMLSKFEYDGGLNPTWKPGPFSLSLDSIATVKLGKTGGAVPPAIVILASGGTKAP 1303 R W+ RF++T+ +F+ L+ + R + ++ + P G ILVA A +G+RV ++L++ VRALV D + E++G ++E+ +++ ++ P++++D+ AV+C G V + + +K Y D QG K A PG + E WGA+DDVVMGGVS S + ++ AA+F G VS AN+GGF SVR+RN +PP + S+++ + LRVKGDG RYKF + + WD S+ YSFDT W DV PF AL+P++R KT++D P + S VY+LQLMLSKFEYDGGLNP ++PG F+L +++I GG + P ++++S G P Sbjct: 6 RSQWDAGRFIKTLTYFDVIPFLSCLQRLFNRSIHQKKENLKTTKPMGMILVA-----GATGGVGKRVVQRLIKDNYRVRALVRDPQRGR--EMLGD---QVELFEADITIPETLTPALMKDIS-AVVCCTGVRVQPVEGDTPTREKYYQGIKFYMPEVVDSPEIVDYQGIKNLVQAAAKNLEPGKQLLFDFKNPTDDLKETWGAVDDVVMGGVSESSIRLID---------QAALFSGIVSTANSGGFVSVRTRNFNPPLNLSEYEGVELRVKGDGQRYKFILRSESKWDGISYCYSFDTQKDSWVDVRIPFQALIPVFRAKTLKDVPAFDSSQVYALQLMLSKFEYDGGLNPNFQPGGFALQVETIKAY-----GGEIKPQFIMISSAGVTRP 374
BLAST of jgi.p|Trimin1|15102 vs. uniprot
Match: A0A2V0NW80_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NW80_9CHLO) HSP 1 Score: 203 bits (517), Expect = 3.210e-54 Identity = 159/416 (38.22%), Postives = 204/416 (49.04%), Query Frame = 2 Query: 239 RQPWEFRRFVRTIAFFNAPRPL------AAARNAIRR------RGEQGASSALPGGCILV--AIGGGDDAATALGQRVTEQLLRRGALVRALVADGKAA----AALELIGGGEKRLEVVQSNWEELPSIKPSVLEDVDRAVICAGGAGVDALVKSLKNYGDV-------QGRKLFS-----SAPGAVKSW-----------------------------EQWGALDDVVMGGVSTSELVVVPGEGEAGGRSSAAVFRGTVSPANNGGFASVRSRNASPPWDWSQFDALRLRVKGDGFRYKFTVYDAAGWDRPSWSYSFDTAAGEWADVTFPFSALMPIYRTKTMQ--DPPPLNLSTVYSLQLMLSKFEYDGGLNPTWKPGPFSLSLDSIATVKLGKTGGAVPPAIVILASGGTKAP 1303 R W+ RF +T+ FFN P L AR RG A GG +LV A GG +G+RV E LL +G VRA+V D + A A+L GG LE+ ++ + +++P +L V + V C VK GD QG K F ++P AV+S +WGALDDVVMGGVS S L + G GE GG +A VFRG VS N+GGF SVR RN PP D + LR+R+KGDG RYK T+ +GWD + SFDTAAGEW V PF+ P++R + ++ D PL+ STVYSLQLMLSKFEYDG LNP + GPF L + I+ V P +V ++S G P Sbjct: 40 RAGWDLGRFAKTVLFFNDPSKLFSGLFSGGARGGGEAPLETLVRGPPAPPGAPDGGVVLVTGATGG-------VGKRVVELLLAKGRRVRAVVRDVEKARGLLASLPAAPGGV--LELAPADVTQPATLRPEMLAGVRQLVSCCA-------VKVQPKEGDTADRAKYFQGIKFFDPEIADNSPEAVESTGMRTVLSAAAPRLGLAAGAPLLLPRPDFAARWGALDDVVMGGVSESGLTLAQGAGEGGG--AALVFRGVVSTDNSGGFVSVRCRNWEPPLDLGAYQGLRIRLKGDGLRYKVTLRTDSGWDGVGYCCSFDTAAGEWQSVELPFADFFPVFRARRVRGGDAKPLDPSTVYSLQLMLSKFEYDGELNPAFAAGPFELPITEISAYLASP----VTPRLVHVSSAGVTRP 433
BLAST of jgi.p|Trimin1|15102 vs. uniprot
Match: K9WA22_9CYAN (NmrA-like family protein n=5 Tax=Oscillatoriales TaxID=1150 RepID=K9WA22_9CYAN) HSP 1 Score: 200 bits (508), Expect = 9.070e-54 Identity = 141/399 (35.34%), Postives = 205/399 (51.38%), Query Frame = 2 Query: 233 KERQPWEFRRFVRTIAFFNAPRPLAAARNAIRRRGE-----QGASSALPGGCILVAIGGGDDAATALGQRVTEQLLRRGALVRALVADGKAAAALELIGGGEKRLEVVQSNWEELPSIKPSVLEDVDRAVICAGGAGVDAL-----------------------------VKSLKNYGDVQGRKLFSSAPGAVKSW--------EQWGALDDVVMGGVSTSELVVVPGEGEAGGRSSAAVFRGTVSPANNGGFASVRSRNASPPWDWSQFDALRLRVKGDGFRYKFTVYDAAGWDRPSWSYSFDTAAGEWADVTFPFSALMPIYRTKTMQDPPPLNLSTVYSLQLMLSKFEYDGGLNPTWKPGPFSLSLDSIATVKLGKTGGAVPPAIVILASGGTKAP 1303 + R W+ RF+ T+ +F L+ + R + QG S + G ILVA A +G+RV +L+ VRALV D A A E++G +++E+ +++ ++ P ++ +V AV+C G V + + +KN R L +A + + E WGA+DDVVMGGVS S + ++ AA+F G VS AN+GGFASVR+RN P + ++++ + LRVKGDG RYKF + A WD S+ YSFDT +W DV PF AL+P++R KT+ D P + S VY+LQLMLSKFEYDGGLNP + PG F+L ++SI GGA P ++++S G P Sbjct: 4 QNRSQWDAGRFLETLTYFEVIPFLSCLKRLFTNRAKNKTETQGGSQIM--GVILVA-----GATGGVGKRVVRRLIEHDYQVRALVRD--AERAREILG---EKVELFEADITLPDTLTPQLMNNVV-AVVCCTGVRVQPVEGDTPDRAKYYQGIKFYMPEVVDSPEIVDYQGIKNLVQAAARSLPQAASTVLFDFKHPTDQLKETWGAVDDVVMGGVSESSMRLIE---------QAALFSGNVSTANSGGFASVRTRNFDSPLNLTEYEGIELRVKGDGQRYKFILRSEAKWDGISYCYSFDTEKDQWIDVRVPFEALIPVFRAKTLPDAPAFDSSHVYALQLMLSKFEYDGGLNPNFAPGAFALQVESIKAY-----GGATKPQFIMISSAGVTRP 375
BLAST of jgi.p|Trimin1|15102 vs. uniprot
Match: A0A1Z4SA01_9NOSO (NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 n=4 Tax=Nostocaceae TaxID=1162 RepID=A0A1Z4SA01_9NOSO) HSP 1 Score: 199 bits (506), Expect = 1.680e-53 Identity = 154/396 (38.89%), Postives = 203/396 (51.26%), Query Frame = 2 Query: 233 KERQPWEFRRFVRTIAFFNAPRPLAAARNAIRRRGEQGASSALPGG-----CILVAIGGGDDAATALGQRVTEQLLRRGALVRALVADGKAAAAL-----ELIGGGEKRLE----VVQSNWEELPS-----IKPSVLEDVDRAVICAG-----------------GAGVDALVKSLKNYGDVQGRKL---FSSAPGAVKSWEQWGALDDVVMGGVSTSELVVVPGEGEAGGRSSAAVFRGTVSPANNGGFASVRSRNASPPWDWSQFDALRLRVKGDGFRYKFTVYDAAGWDRPSWSYSFDTAAGEWADVTFPFSALMPIYRTKTMQDPPPLNLSTVYSLQLMLSKFEYDGGLNPTWKPGPFSLSLDSIATVKLGKTGGAVPPAIVILASGGTKAP 1303 K R W+ RFV T+ +F L + I+ R S A P G ILVA A LG+RV ++LL RG VRALV D + A + +L+ G + E VV +N + + ++P + DRA G GV LV++ Y KL F++ +K+ WGA+DDVVMGGVS S + +V +AA F G VS AN+GGFASVR+RN PP+D S + ++LRVKGDG RYKF + WD +SYSFDT A W DVT PF+ L P++R KT++D PP+N S + S QLMLSKFEYD LNP + PG F L L+SI GG P V+++S G P Sbjct: 4 KNRSQWDLGRFVETLTYFEVIPFLNWVQQLIQGRFTD--SQAKPNGGKNVGVILVA-----GATGGLGKRVVQRLLERGYKVRALVRDIEKARTILNDDIDLVVGDITKPETLTPVVMANIQAVVCCTAVRVQPVEGDTADRAKYYQGIKFYQPEIVGDTPENVEYQGVKNLVETAIKYLPQAHEKLIFDFTNPSAELKNI--WGAVDDVVMGGVSKSNIQLVE---------NAAFFAGNVSTANSGGFASVRTRNFDPPFDLSGYTGVKLRVKGDGQRYKFFLRTDTQWDGIGYSYSFDTIANTWIDVTIPFADLTPVFRAKTVKDCPPINSSKISSFQLMLSKFEYDNALNPKFSPGGFVLQLESIKVY-----GGETLPQFVLVSSAGVTRP 376 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|15102 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9817 ID=mRNA_9817|Name=jgi.p|Trimin1|15102|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1756bp|location=Sequence derived from alignment at Contig_129:14436..21175+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ACAAGCGCTGCGGCAAACGTGCGCGTCTGTCCAAATGACGCTATCCCGCAback to top protein sequence of jgi.p|Trimin1|15102 >Trimin1|15102|CE15101_116 ID=Trimin1|15102|CE15101_116|Name=jgi.p|Trimin1|15102|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=453bp MTLSRMLKVLLVASTAPACVCGFAFGARVGSGLMAGSHHMTGSWRDPALRback to top mRNA from alignment at Contig_129:14436..21175+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9817 ID=mRNA_9817|Name=jgi.p|Trimin1|15102|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6740bp|location=Sequence derived from alignment at Contig_129:14436..21175+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_129:14436..21175+ >mRNA_9817 ID=mRNA_9817|Name=jgi.p|Trimin1|15102|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1359bp|location=Sequence derived from alignment at Contig_129:14436..21175+ (Tribonema minus UTEX_B_3156 )back to top |