mRNA_9799 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|93632 vs. uniprot
Match: A0A835YJ55_9STRA (S-adenosyl-L-methionine-dependent methyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ55_9STRA) HSP 1 Score: 457 bits (1176), Expect = 8.980e-163 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1
Query: 1 VDQDLVDALTAGSAEEQRDYFLSRQQYSLREFWDAFYTPYDEGESEAGETYDWFLGYPKMREALLEHASHARNGAGTVLILGCGNSELSERMYDDGWTQQINIDFSKPVIDLMRSKHTDKPGMEWAVMDARDMSGVPDGSVQTVIDKGLIDALTHSDQYRDDIQKVVAESARVLRPGGSYICTSFNTPESLLPLLSNNAWQSEGVECRGNLTPTVLLYVGYKR 669
VDQDLVDALTAGSAEEQRDYFLSRQQYSLREFWDAFYTPYDEGESEAGETYDWFLGYPKMREALLEHASHARNGAGTVLILGCGNSELSERMYDDGWTQQINIDFSKPVIDLMRSKHTDKPGMEWAVMDARDMSGVPDGSVQTVIDKGLIDALTHSDQYRDDIQKVVAESARVLRPGGSYICTSFNTPESLLPLLSNNAWQSEGVECRGNLTPTVLLYVGYKR
Sbjct: 1 VDQDLVDALTAGSAEEQRDYFLSRQQYSLREFWDAFYTPYDEGESEAGETYDWFLGYPKMREALLEHASHARNGAGTVLILGCGNSELSERMYDDGWTQQINIDFSKPVIDLMRSKHTDKPGMEWAVMDARDMSGVPDGSVQTVIDKGLIDALTHSDQYRDDIQKVVAESARVLRPGGSYICTSFNTPESLLPLLSNNAWQSEGVECRGNLTPTVLLYVGYKR 223
BLAST of jgi.p|Trimin1|93632 vs. uniprot
Match: A0A6H5KHX6_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX6_9PHAE) HSP 1 Score: 185 bits (469), Expect = 1.080e-53 Identity = 90/202 (44.55%), Postives = 125/202 (61.88%), Query Frame = 1
Query: 55 DYFLSRQQYSLREFWDAFYTPYDEGESEAGETYDWFLGYPKMREALLEHASHARNGAGTVLILGCGNSELSERMYDDGWTQQINIDFSKPVIDLMRSKHTDKPGMEWAVMDARDMSGVPDGSVQTVIDKGLIDALTHSDQYRDDIQKVVAESARVLRPGGSYICTSFNTPESLLPLLSNNAWQSEGVECRGNLTPTVLLYVG 660
D R+ YS E+WD FY + G + GE+YDWF GY ++ L H AR AG VL+LGCGNSE+S +M+++GW ++IDF PVI+ M+S H DKPGMEW VMDARDM+ + GS VIDKGL D++ ++D++ + KV E ARVL+PGG Y+ + PE + L + W+ + G +T V L+ G
Sbjct: 77 DIIRHREAYSYAEYWDEFYAGGEAGSLKDGESYDWFFGYSRLAVYLNLHVGGAR--AGRVLVLGCGNSEVSPKMWENGWKDIVSIDFCNPVIEAMQSAHADKPGMEWKVMDARDMAELETGSFDAVIDKGLTDSVMYNDKFSVMMAKVSYEVARVLKPGGVYLMADYRDPERIQELFERDEWEGGSLTQEGKITSKVHLFKG 276
BLAST of jgi.p|Trimin1|93632 vs. uniprot
Match: A0A6V1RBJ9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RBJ9_HETAK) HSP 1 Score: 131 bits (329), Expect = 1.510e-33 Identity = 81/218 (37.16%), Postives = 114/218 (52.29%), Query Frame = 1
Query: 25 LTAGSAEEQRDYFLSRQQYSLREFWDAFYTPYDEGESEAGETYDWFLGYPKMREALLEHASHARNGAGTVLILGCGNSELSERMYDDGWTQQINIDFSKPVIDLMRSKHTDKPGMEWAVMDARDMSGVPDGSVQTVIDKGLIDALTHSDQYRDDIQKVVAESARVLRPGGSYICTSFNTPESLLPLLSNNA---WQSEGVECRGNLTPTVLLYVGYKR 669
+T S E Q D + Q Y+ R +WD FY +TY+WFL Y ++ +L +++LGCGNS L+ MY++GW N+D+S VI+ M +KH + W MDARD+ P+ S VIDKGL+DA+ S+ + I ++ +VL+PGG Y C SF P + PLL N WQ E VE LT LLY+ K+
Sbjct: 75 VTRKSQESQADCWQDPQSYATRSYWDDFYKA-------NSDTYEWFLEYNDLQSSLNTKVPKEHQ----IIMLGCGNSNLTIDMYNNGWKSISNVDYSPLVIEQMAAKHKGIGDLSWHQMDARDLR-FPENSYGAVIDKGLLDAMACSEAFDLYIPQIAQSVCKVLQPGGKYYCISFCQPSIVKPLLEENMKDHWQVE-VE---RLTEKYLLYLCTKK 276
BLAST of jgi.p|Trimin1|93632 vs. uniprot
Match: D7G816_ECTSI (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G816_ECTSI) HSP 1 Score: 121 bits (303), Expect = 1.430e-30 Identity = 58/129 (44.96%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 274 MYDDGWTQQINIDFSKPVIDLMRSKHTDKPGMEWAVMDARDMSGVPDGSVQTVIDKGLIDALTHSDQYRDDIQKVVAESARVLRPGGSYICTSFNTPESLLPLLSNNAWQSEGVECRGNLTPTVLLYVG 660
M+++GW ++IDF PVI+ M+S H DKPGMEW VMDARDM GS VIDKGL D++ ++D++ + KV E ARVL+PGG Y+ T + PE + L + W+S + G +T V L+ G
Sbjct: 1 MWENGWKDIVSIDFCNPVIEAMQSAHADKPGMEWKVMDARDMVEFETGSFDAVIDKGLTDSVMYNDKFSVMMAKVSYEVARVLKPGGVYLMTDYRDPERVQELFERDEWESGSLTQEGKITSKVHLFKG 129
BLAST of jgi.p|Trimin1|93632 vs. uniprot
Match: A0A0G4GZM5_VITBC (Methyltransf_11 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GZM5_VITBC) HSP 1 Score: 120 bits (302), Expect = 3.470e-30 Identity = 64/165 (38.79%), Postives = 91/165 (55.15%), Query Frame = 1
Query: 76 QYSLREFWDAFYTPYDEGESEAGETYDWFLGYPKMREAL--LEHASHARNGAGTVLILGCGNSELSERMYDDGWTQQINIDFSKPVIDLMRSKHTDKPGMEWAVMDARDMSGVPDGSVQTVIDKGLIDALTHSDQYRDDIQKVVAESARVLRPGGSYICTSFNTP 564
QY +E+WD YT + + +DW+ YP ++E L L SH +L +GCGNS LSE MY+DG+ N+D S VI M+ KH DKPGM + M+ DM DG TVIDKG +D++ ++Q ++ E RVL+P G Y+C ++ P
Sbjct: 3 QYGKKEYWDERYT-------KDPDAFDWYQRYPALKEILGDLVQVSHK------ILNVGCGNSRLSEDMYEDGYHSIENVDISSIVIKGMQEKHADKPGMAFRQMNVLDMKEFSDGQFDTVIDKGTMDSILCGQDSTRNVQTMLKEIFRVLKPSGQYVCVTYGQP 154
BLAST of jgi.p|Trimin1|93632 vs. uniprot
Match: UPI001F5D1C8F (EEF1A lysine methyltransferase 4-like isoform X1 n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D1C8F) HSP 1 Score: 121 bits (303), Expect = 3.500e-30 Identity = 65/165 (39.39%), Postives = 91/165 (55.15%), Query Frame = 1
Query: 94 FWDAFYTPYDEGESEAGETYDWFLGYPKMREALLEHASHARNGAGTVLILGCGNSELSERMYDDGWTQQINIDFSKPVIDLMRSKHTDKPGMEWAVMDARDMSGVPDGSVQTVIDKGLIDALTHSDQYRDDIQKVVAESARVLRPGGSYICTSFNTPESLLPLLS 588
+WDA Y+ G G +DW+ YP +R L + VL+LGCGNS LSE M DG+ +N+D S VI+ M+ KH D P + + MD RDMS DGS VIDKG +DA+ D +++ E AR++RPGG Y+ ++ P+ L LL+
Sbjct: 16 YWDARYSSPSTGGKGRGGFFDWYQAYPALRPILRACVPTSSR----VLMLGCGNSLLSEDMVKDGYEDIVNMDISSVVIEQMKEKHMDIPQLTYMQMDVRDMSLFADGSFDCVIDKGTLDAMMCGDDAPHGASRMLEEVARIMRPGGIYMLITYGAPKERLTLLN 176
BLAST of jgi.p|Trimin1|93632 vs. uniprot
Match: A0A8J5S583_ZIZPA (Methyltransf_11 domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5S583_ZIZPA) HSP 1 Score: 119 bits (299), Expect = 3.570e-30 Identity = 64/169 (37.87%), Postives = 92/169 (54.44%), Query Frame = 1
Query: 79 YSLREFWDAFYTPYDEGESEAGETYDWFLGYPKMREALLEHASHARNGAGTVLILGCGNSELSERMYDDGWTQQINIDFSKPVIDLMRSKHTDKPGMEWAVMDARDMSGVPDGSVQTVIDKGLIDALTHSDQYRDDIQKVVAESARVLRPGGSYICTSFNTPESLLPLL 585
Y +WDA Y+ G G +DW+ YP +R L + +L+LGCGNS LSE M DG+ + +N+D S VI+ MR KH + P + + MD RDMS D + V+DKG +DA+ D K++AE R+LRPGG Y+ ++ P+ +PLL
Sbjct: 11 YGAAAYWDARYSSPSSGAG--GAFFDWYQKYPALRPLLRSRLPTSSR----ILMLGCGNSLLSESMVKDGYEEVVNVDISSVVIEQMREKHMEIPQLTYFQMDVRDMSFFGDETFDCVLDKGTLDAMMCGDDAPRGASKMLAEVTRLLRPGGIYMLITYGAPKERVPLL 173
BLAST of jgi.p|Trimin1|93632 vs. uniprot
Match: A0A2T7EE87_9POAL (Methyltransf_11 domain-containing protein n=6 Tax=Panicum TaxID=4539 RepID=A0A2T7EE87_9POAL) HSP 1 Score: 121 bits (304), Expect = 3.930e-30 Identity = 68/193 (35.23%), Postives = 100/193 (51.81%), Query Frame = 1
Query: 79 YSLREFWDAFYTPYDEGESEAGETYDWFLGYPKMREALLEHASHARNGAGTVLILGCGNSELSERMYDDGWTQQINIDFSKPVIDLMRSKHTDKPGMEWAVMDARDMSGVPDGSVQTVIDKGLIDALTHSDQYRDDIQKVVAESARVLRPGGSYICTSFNTPESLLPLLSNNAWQSEGVECRGNLTPTVLLYV 657
Y +WDA Y+ G+ +DW+ Y +R L A VL+LGCGNS LSE M DG+ +NID S VI+ MR KH + P + + MD RDM+ D S V+DKG +DA+ +D D K++AE AR+LRP G Y+ ++ P+ +P+L C+ + ++ LY+
Sbjct: 11 YGAAAYWDARYSSGSPASGGGGKFFDWYQTYAALRPLLRARIP----AASRVLMLGCGNSLLSEDMAKDGYKDIVNIDISSVVIEQMREKHKEIPQLTYMQMDVRDMTFFADESFDCVLDKGTLDAMMCADDAPDGASKMLAEVARLLRPHGIYLLITYGAPKERVPIL-----------CQAGCSWSITLYI 188
BLAST of jgi.p|Trimin1|93632 vs. uniprot
Match: UPI001F5C5454 (EEF1A lysine methyltransferase 4-like isoform X1 n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5C5454) HSP 1 Score: 121 bits (303), Expect = 5.790e-30 Identity = 68/180 (37.78%), Postives = 95/180 (52.78%), Query Frame = 1
Query: 94 FWDAFYTPYDEGESEAGETYDWFLGYPKMREALLEHASHARNGAGTVLILGCGNSELSERMYDDGWTQQINIDFSKPVIDLMRSKHTDKPGMEWAVMDARDMSGVPDGSVQTVIDKGLIDALTHSDQYRDDIQKVVAESARVLRPGGSYICTSFNTPESLLPLLSNNAWQSEGVECRGNL 633
+WDA Y+ G G +DW+ YP +R L + VL+LGCGNS LSE M DG+ +N+D S VI+ M+ KH D P + + MD RDMS DGS VIDKG +DA+ D +++AE AR+ RPGG Y+ ++ P+ L +L+ CR N+
Sbjct: 16 YWDARYSSPSTGGKGRGGFFDWYQAYPALRPILRACVPTSSR----VLMLGCGNSLLSEDMAKDGYEDIVNMDISSVVIEQMKEKHMDIPQLTYMQMDVRDMSLFADGSFDCVIDKGTLDAMMCGDDAPHGASRMLAEVARITRPGGIYMLITYGAPKERLTILNQ-------ARCRWNV 184
BLAST of jgi.p|Trimin1|93632 vs. uniprot
Match: UPI001C26EC74 (EEF1A lysine methyltransferase 4-like n=3 Tax=Salvia TaxID=21880 RepID=UPI001C26EC74) HSP 1 Score: 120 bits (301), Expect = 7.640e-30 Identity = 67/192 (34.90%), Postives = 104/192 (54.17%), Query Frame = 1
Query: 25 LTAGSAEEQRDYFLSRQQYSLREFWDAFYTPYDEGESEAGETYDWFLGYPKMREALLEHASHARNGAGTVLILGCGNSELSERMYDDGWTQQINIDFSKPVIDLMRSKHTDKPGMEWAVMDARDMSGVPDGSVQTVIDKGLIDALTHSDQYRDDIQKVVAESARVLRPGGSYICTSFNTPESLLPLLSNNAW 600
+TAG + + Q Y +WD Y S+ T+DW+ YP + + + + +L++GCGNS LSE M DDG+ + IN+D S+ VI+ M++K++D P M++ VMD RDMS S VIDKG +D+L + + KV+ E RVL+ G YI ++ +P LP+L + +W
Sbjct: 1 MTAGKSPAAGGSTTTTQAYGEAWYWDNRY-------SQDPSTFDWYQKYPSLAPLIRLYVPTHHH---PILVVGCGNSGLSEEMADDGYNEVINVDISRVVIEAMQTKYSDNPMMKYMVMDVRDMSAFDTRSFAAVIDKGTLDSLLCGHNAQQNAAKVLVEVWRVLKDKGVYILITYGSPVYRLPVLKDLSW 182 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|93632 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9799 ID=mRNA_9799|Name=jgi.p|Trimin1|93632|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=690bp|location=Sequence derived from alignment at Contig_81:522220..523856- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GTAGACCAGGATCTTGTGGATGCTCTCACTGCTGGCAGTGCAGAAGAGCAback to top protein sequence of jgi.p|Trimin1|93632 >Trimin1|93632|CE93631_38 ID=Trimin1|93632|CE93631_38|Name=jgi.p|Trimin1|93632|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=224bp VDQDLVDALTAGSAEEQRDYFLSRQQYSLREFWDAFYTPYDEGESEAGETback to top mRNA from alignment at Contig_81:522220..523856- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9799 ID=mRNA_9799|Name=jgi.p|Trimin1|93632|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1637bp|location=Sequence derived from alignment at Contig_81:522220..523856- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_81:522220..523856- >mRNA_9799 ID=mRNA_9799|Name=jgi.p|Trimin1|93632|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=672bp|location=Sequence derived from alignment at Contig_81:522220..523856- (Tribonema minus UTEX_B_3156 )back to top |