mRNA_9787 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|171361 vs. uniprot
Match: A0A835YMH1_9STRA (TLDc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMH1_9STRA) HSP 1 Score: 1072 bits (2773), Expect = 0.000e+0 Identity = 521/521 (100.00%), Postives = 521/521 (100.00%), Query Frame = 1
Query: 1 LMQDYKPTEVLTLNIGGAKLRLKRSALTHIEDSKLAWMFSGRWDHVLPRDHLGRIFLDLDINWFRPITDFLSELSQSAAADEAYLPIMQRSDDDRLGLQACVELFGLCDSIPAQGLAGMPQHIASVARLGQESGLKIGWSAPWQLLYQASVNGAKAREFHSWCDGKPHTLCLAMDNEGNILGGFTSVPWESSGTYKRDPAAFLFFKGVESPATQRYSQTGNSPQWAVIHNSGYGPAFGGGRDFAFTFSRQPEGGMTYSSSANTYQPMPINGTSGTVSDLFVWQVPQIGGSAPFNYSSDSTPPLELRADMSSLTGPATSLSFHFGLWLKEQLDAYDSELQAIERQAKLFAAEKAFMQQLAPEDIDSRKRAWLEKVGTYVRVHSVLTSRASAPPSPLRGVHNGIVYMACWGGGQLCTMREMFKQFGRSMLANKYASDVWARNIRAAALDEDGCIVENHHHECFQKLVNVMRLRAIVRRPAFSGTVGSSKPAPMPAHLAPAMTKMLEYLMINHEQCFNALDAPV 1563
LMQDYKPTEVLTLNIGGAKLRLKRSALTHIEDSKLAWMFSGRWDHVLPRDHLGRIFLDLDINWFRPITDFLSELSQSAAADEAYLPIMQRSDDDRLGLQACVELFGLCDSIPAQGLAGMPQHIASVARLGQESGLKIGWSAPWQLLYQASVNGAKAREFHSWCDGKPHTLCLAMDNEGNILGGFTSVPWESSGTYKRDPAAFLFFKGVESPATQRYSQTGNSPQWAVIHNSGYGPAFGGGRDFAFTFSRQPEGGMTYSSSANTYQPMPINGTSGTVSDLFVWQVPQIGGSAPFNYSSDSTPPLELRADMSSLTGPATSLSFHFGLWLKEQLDAYDSELQAIERQAKLFAAEKAFMQQLAPEDIDSRKRAWLEKVGTYVRVHSVLTSRASAPPSPLRGVHNGIVYMACWGGGQLCTMREMFKQFGRSMLANKYASDVWARNIRAAALDEDGCIVENHHHECFQKLVNVMRLRAIVRRPAFSGTVGSSKPAPMPAHLAPAMTKMLEYLMINHEQCFNALDAPV
Sbjct: 1 LMQDYKPTEVLTLNIGGAKLRLKRSALTHIEDSKLAWMFSGRWDHVLPRDHLGRIFLDLDINWFRPITDFLSELSQSAAADEAYLPIMQRSDDDRLGLQACVELFGLCDSIPAQGLAGMPQHIASVARLGQESGLKIGWSAPWQLLYQASVNGAKAREFHSWCDGKPHTLCLAMDNEGNILGGFTSVPWESSGTYKRDPAAFLFFKGVESPATQRYSQTGNSPQWAVIHNSGYGPAFGGGRDFAFTFSRQPEGGMTYSSSANTYQPMPINGTSGTVSDLFVWQVPQIGGSAPFNYSSDSTPPLELRADMSSLTGPATSLSFHFGLWLKEQLDAYDSELQAIERQAKLFAAEKAFMQQLAPEDIDSRKRAWLEKVGTYVRVHSVLTSRASAPPSPLRGVHNGIVYMACWGGGQLCTMREMFKQFGRSMLANKYASDVWARNIRAAALDEDGCIVENHHHECFQKLVNVMRLRAIVRRPAFSGTVGSSKPAPMPAHLAPAMTKMLEYLMINHEQCFNALDAPV 521
BLAST of jgi.p|Trimin1|171361 vs. uniprot
Match: A0A835YTK3_9STRA (TLDc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK3_9STRA) HSP 1 Score: 760 bits (1963), Expect = 1.090e-271 Identity = 381/551 (69.15%), Postives = 442/551 (80.22%), Query Frame = 1
Query: 13 YKPTEVLTLNIGGAKLRLKRSALTHIEDSKLAWMFSGRWDHVLPRDHLGRIFLDLDINWFRPITDFLSELSQSAAADEAYLPIMQRSDDDRLGLQACVELFGLCDSIPAQGLAGMP--QHIASVARLGQESGLKIGWSAPWQLLYQASVNGAKAREFHSWCDGKPHTLCLAMDNEGNILGGFTSVPW--ESSGTYKRDPAAFLFFKGVESPATQRYSQTGNSPQWAVIHNSGYGPAFGGGRDFAFTFSRQPEGGMTYSSSANTYQPMPINGTSGTVSDLFVWQVPQIGGSAPF--------------------NYSSDSTPPLELRADMSSLTGPATSLSFHFGLWLKEQLDAYDSELQAIERQAKLFAAEKAFMQQLAPEDIDSRKRAWLEKVGTYVRVHSVLTSRAS------APPSPLRGVHNGIVYMACWGGGQLCTMREMFKQFGRSMLANKYASDVWARNIRAAALDEDGCIVENHHHECFQKLVNVMRLRAIV--RRPAFSGTVGSSKPAPMPAHLAPAM--TKMLEYLMINHEQCFNALDAPV 1563
Y P EVLTLN+GGAKL LKRSA+ ++EDSKLAWMF+GRWDHVLPRDH GRIFLDLDINWFRPIT+FLSELSQ A A AYLPIMQ DDDR+G+QAC+ELFGLCD + AQG+A +P QH+ SVA LGQESGL+IGWSAPWQLLYQ+SVNGA A +FH CDGKP+T+ LA+D +GN+ GG +V W SS +++ D AAFLF++G S A QRYSQ N+ Q AV H+S YGP FG G D FTF G +T++SS ++QP+PI GTSGTV DLFVWQVPQ GGSAP +Y+SDS PPL+LRADMSSLTGPAT+LSFHFGLWLKEQLDA+D+ELQA+ER+A+LFAAEKAF+QQLAPEDID RKRAWLEKVGTY+RVH+ APPSPL+GVHNGIVY+ CWGGGQLCTMRE FKQFGRSMLANKYASDVWARN+RAAALD+DGC+VE+H+HECFQKLVNVMRLRAIV RRP FSGT+GS+KP+ MPAHLA AM T+ML YL I+HEQ +ALD+PV
Sbjct: 47 YNPPEVLTLNVGGAKLLLKRSAMAYVEDSKLAWMFNGRWDHVLPRDHSGRIFLDLDINWFRPITNFLSELSQGAEAGVAYLPIMQLMDDDRVGVQACMELFGLCDIVSAQGIASVPLTQHVTSVAHLGQESGLEIGWSAPWQLLYQSSVNGAIAHDFHRLCDGKPNTVSLAVDEKGNVFGGLATVAWASHSSRSWQPDRAAFLFYEGSGSTAMQRYSQARNNIQSAVFHHSSYGPVFGNGYDLVFTFIG---GTITHTSSTQSFQPLPIKGTSGTVIDLFVWQVPQTGGSAPLKLSPSPRADATASRQPVCNLSYNSDSAPPLKLRADMSSLTGPATTLSFHFGLWLKEQLDAFDNELQAVERRAELFAAEKAFLQQLAPEDIDGRKRAWLEKVGTYIRVHNANMKSLGGDIHPPAPPSPLKGVHNGIVYITCWGGGQLCTMRETFKQFGRSMLANKYASDVWARNVRAAALDDDGCVVEDHNHECFQKLVNVMRLRAIVTVRRPGFSGTIGSAKPSHMPAHLALAMSVTEMLNYLAIDHEQFVSALDSPV 594
BLAST of jgi.p|Trimin1|171361 vs. uniprot
Match: A0A835YZL9_9STRA (TLDc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZL9_9STRA) HSP 1 Score: 700 bits (1807), Expect = 1.480e-248 Identity = 351/552 (63.59%), Postives = 416/552 (75.36%), Query Frame = 1
Query: 1 LMQDYKPTEVLTLNIGGAKLRLKRSALTHIEDSKLAWMFSGRWDHVLPRDHLGRIFLDLDINWFRPITDFLSELSQSAAADEAYLPIMQRSDDDRLGLQACVELFGLCDSIPA----------QGLAGMPQHIASVARLGQESGLKIGWSAPWQLLYQASVNGAKAREFHSWCDGKPHTLCLAMDNEGNILGGFTSVPWESSGTYKRDPAAFLFFKGVESPATQRYSQTGNSPQWAVIHNSGYGPAFGGGRDFAFTFSRQPEGGMTYSSSANTYQPMPINGTSGTVSDLFVWQVPQIGGSAP----------------FNYSSDSTPPLELRADMSSLTGPATSLSFHFGLWLKEQLDAYDSELQAIERQAKLFAAEKAFMQQL----APEDIDSRKRAWLEKVGTYVRVHSVLTSRASAPPSPLRGVHNGIVYMACWGGGQLCTMREMFKQFG-RSMLANKYASDVWARNIRAAALDEDGCIVENHHHECFQKLVNVMRLRAIVRRPAFSGTVGSSKPAPMPAHLAPAMTKMLEYLMINHEQCFNALDAPV 1563
++Q+Y+P VL LN+GGAKLR+KRSALTH++DSKLAWMFSGRWDHVLPR+H GR FLDLD+ WF PITDFLS+LS AAADE LP+ Q SDDD+LG+QAC E+FGLC + Q LA + QH+ASVA LGQES +GWSAPWQLLYQ+SV+GA A+EFH CD KPHT+CLA+DNEGN+ GG+TSV W SS ++ DPAAFLF++G S A Q YSQ G SP+ ++ H+S P FGGG D F S G +TYSSS+ TY MPINGTSGTV DLFVWQVPQ GGSAP +Y+SDSTPP+ RAD+SSLTGPAT+LSF FGLWLKEQLD Y EL+A++ + +LFA+EK FMQQL +P+D++ RKRAWLEKV T+ HS + A PSPL+GVH+GIVY+ CWG GQLCTMRE F Q G + LA KYASDVWA NI +AALDEDGC++E+H+ ECFQKLVNVMRLRA+VRRP FS TVGSSKPAPMPAHLA AM MLEYLMI+ EQ F LD+PV
Sbjct: 7 VLQEYQPPSVLILNVGGAKLRVKRSALTHVDDSKLAWMFSGRWDHVLPRNHSGRKFLDLDVKWFSPITDFLSKLSSGAAADEVRLPVSQLSDDDKLGVQACAEMFGLCHILARELNLRPLLVQQALANLAQHVASVAHLGQESKRVVGWSAPWQLLYQSSVHGATAQEFHRLCDCKPHTICLAIDNEGNMFGGYTSVAWTSSDGWQADPAAFLFYEGRGSAALQCYSQKGTSPEHSIRHHSSLWPTFGGGHDLRFKSSSA--GTITYSSSSKTYHTMPINGTSGTVIDLFVWQVPQTGGSAPAATDADDTVLNQPACRLSYTSDSTPPVAFRADLSSLTGPATALSFRFGLWLKEQLDMYAIELRAVKHRTELFASEKTFMQQLIAAMSPDDVNGRKRAWLEKVRTHNCTHSTGGTDPPATPSPLKGVHHGIVYITCWGTGQLCTMRETFTQLGDETPLAKKYASDVWAANIESAALDEDGCVIEDHNAECFQKLVNVMRLRAMVRRPDFSSTVGSSKPAPMPAHLARAMASMLEYLMIDSEQFFGTLDSPV 556
BLAST of jgi.p|Trimin1|171361 vs. uniprot
Match: A0A835Z1Y2_9STRA (TLDc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Y2_9STRA) HSP 1 Score: 667 bits (1721), Expect = 1.840e-235 Identity = 345/552 (62.50%), Postives = 411/552 (74.46%), Query Frame = 1
Query: 1 LMQDYKPTEVLTLNIGGAKLRLKRSALTHIEDSKLAWMFSGRWDHVLPRDHLGRIFLDLDINWFRPITDFLSELSQSAAADEAYLPIMQRSDDDRLGLQACVELFGLCDSIPA----------QGLAGMPQHIASVARLGQESGLKIGWSAPWQLLYQASVNGAKAREFHSWCDGKPHTLCLAMDNEGNILGGFTSVPWESS-GTYKRDPAAFLFFKGVESPATQRYSQTGNSPQWAVIHNSGYGPAFGGGRDFAFTFSRQPEGGMTYSSSANTYQPMPINGTSG-TVSDLFVWQVPQIGGSAPFNYSSDS---------------TPPLELRADMSSLTGPATSLSFHFGLWLKEQLDAYDSELQAIERQAKLFAAEKAFMQQ----LAPEDIDSRKRAWLEKVGTYVRVHSVLTSRASAPPSPLRGVHNGIVYMACWGGGQLCTMREMFKQFGRSMLANKYASDVWARNIRAAALDEDGCIVENHHHECFQKLVNVMRLRAIVRRPAFSGTVGSSKPAPMPAHLAPAMTKMLEYLMINHEQCFNALDAPV 1563
++QDYKP +LTLN+GGAKL +KRSALT +DSKLAWMFSGRWDHVLPRDH GRIFLDLD+ WF PIT++LSELS+ AAAD+ +LP+ Q SDDD+LG+QAC E+FGLC + Q LA + QHIASVARLG+E+ LKIGWSAPWQLLYQ+S +GA +EFH C KP+T+CLA D++GN+ GGFT+V SS G+++ DPAAFLF KG S A QRY QTG SPQ AV+H S +GP FG G D F FS EG + Y S+ TYQPMPINGTSG V LFVWQVPQ G SAP + + ++ T P+ LRADMSSLT PAT+LSFHFGLWLKEQLDA DSEL+A++R+AKLF +E AFMQQ L+PED+D RKRAWLEKV + S S APP+ L+G+HNGIVY+AC G GQLCTMRE F QFG + LANKYASDVW I LDE+GC+ E+H+ ECF KL NVMRLR+IVRRP FSGT+GSSKPAPMPAHL MT MLEYLMI+ EQ F++L++PV
Sbjct: 11 VLQDYKPPSLLTLNVGGAKLLVKRSALTLFDDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITEYLSELSRGAAADDVHLPLTQLSDDDKLGVQACAEMFGLCPILARELDPRLFLARQALANVTQHIASVARLGEETKLKIGWSAPWQLLYQSSAHGATPQEFHRLCAHKPNTICLATDDKGNVFGGFTTVARTSSPGSWQPDPAAFLFCKGSNSTAMQRYCQTGTSPQHAVLHKSSHGPIFGVGNDLQFAFSS--EGAIAYCSATRTYQPMPINGTSGGKVVYLFVWQVPQTGDSAPPSLTPNADAAVSCQPAPSLSYITSPVALRADMSSLTDPATTLSFHFGLWLKEQLDACDSELRAVDRRAKLFTSEMAFMQQVNATLSPEDLDGRKRAWLEKVCIQTAMPS--ESDPPAPPTRLKGIHNGIVYIACRGTGQLCTMRETFTQFGATPLANKYASDVWG-GIVEVELDEEGCVFEDHNQECFHKLANVMRLRSIVRRPDFSGTIGSSKPAPMPAHLTATMTNMLEYLMIDSEQFFSSLNSPV 557
BLAST of jgi.p|Trimin1|171361 vs. uniprot
Match: A0A835Z2V8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2V8_9STRA) HSP 1 Score: 588 bits (1515), Expect = 1.180e-204 Identity = 316/538 (58.74%), Postives = 389/538 (72.30%), Query Frame = 1
Query: 1 LMQDYKPTEVLTLNIGGAKLRLKRSALTHIEDSKLAWMFSGRWDHVLPRDHLGRIFLDLDINWFRPITDFLSELSQSAAADEAYLPIMQRSDDDRLGLQACVELFGLCD--------SIPAQGLAGMPQHIASVARLGQESGLKIGWSAPWQLLYQASVNGAKAREFHSWCDGKPHTLCLAMDNEGNILGGFTSVPWESSGTYKRDPAAFLFFKGV--ESPATQRYSQTGNSPQWAVIHNSGYGPAFGGGRDFAFTFSRQPEGGMTYSSSANTYQPMPINGTS-GTVSDLFVWQVPQIGGSAPFNYSSDSTPPLELRADMSS--LTGPATSLSFHFGLWLKEQLDAYDSELQAIERQAKLFAAEKAFMQQL----APEDIDSRKRAWLEKVGTYV----RVHSVLTSRASAPPSPLRGVHNGIVYMACWGGGQLCTMREMFKQFGRSMLANKYASDVWARNIRAAALDEDGCIVENHHHECFQKLVNVMRLRAIVRRPAFSGTVGSSKPAPMPAHLAPAMTKMLEYLMINHEQCFNAL 1551
++Q YKP +L LN+GGAKLR+KRSALTH++DSKLAWMFSGRWDHVLPRDH GRIFLDLD+ WF PIT +LS+LS+ AAD +LPI SDDD+LGL+AC EL+GL D SI Q L M QH+ASVARLGQ SGL IGWSAPWQLLY++SV+GA A+EFH CDGKP+T+CLA+D+ G++ GGFTSV W + +Y+ DPAAFLF + +S QRYS G PQ+A+ H+ + P FG D F + + + YSSS+ ++QPMPING + GTV DL +WQVP GSA PP +S +T AT+L+ F LWLKEQL A DSELQAI+R+A+LFA+E+AFMQQL P+D+D+RK AWLE+V T + R H ++ +A A LRGVHNGIVY+AC G GQLCTMR+ F QFG + LANKYASDVW N+ LDE+GC+ E+H+ ECF KLVNVMRLRAIVRR FSGT+GSSKPAPMPAHLAP MT MLEYLMI+ + F++L
Sbjct: 5 VVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKATLYSIAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGTSYQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFALYHSDDW-PRFGSS-DLWFKSAAET---LMYSSSSTSFQPMPINGVNDGTVIDLLIWQVPLTDGSA-----QPVPPPRSDNTILSQEVMTRAATTLNL-FSLWLKEQLGACDSELQAIQRRAELFASERAFMQQLNTALPPDDMDTRKNAWLEQVCTSIYVCTRCHLSVSPKACAVYR-LRGVHNGIVYIACSGTGQLCTMRDTFTQFGDTPLANKYASDVWGGNVEVE-LDEEGCVFEDHNQECFDKLVNVMRLRAIVRRTGFSGTIGSSKPAPMPAHLAPTMTNMLEYLMIDSKHFFSSL 529
BLAST of jgi.p|Trimin1|171361 vs. uniprot
Match: A0A835Z9G2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G2_9STRA) HSP 1 Score: 380 bits (977), Expect = 4.030e-125 Identity = 192/341 (56.30%), Postives = 232/341 (68.04%), Query Frame = 1
Query: 1 LMQDYKPTEVLTLNIGGAKLRLKRSALTHIEDSKLAWMFSGRWDHVLPRDHLGRIFLDLDINWFRPITDFLSELSQSAAADEAYLPIMQRSDDDRLGLQACVELFGLCDSIPAQGLAGMPQHIASVARLGQESGLKIGWSAPWQLLYQASVNGAKAREFHSWCDGKPHTLCLAMDNEGNILGGFTSVPW-ESSGTYKRDPAAFLFFKGVESPATQRYSQTGNSPQWAVIHNSGYGPAFGGGRDFAFTFSR------QPEGGMTYSSSANTYQPMPINGTSGTVSDLFVWQVPQIGGSAP------------------FNYSSDSTPPLELRADMSSLTGPA 948
++QDY+P +L LN+GGAKLR+KRSALTH++DSKLAWMF+GRWDH LPRDH G IFLD+D+ WF PI ++LSELS+ AA+EAYLPIMQ SDDDRLG +ACVELFGL D +P Q Q +ASVA G ESGL + WSA WQLL Q+S + A +EFH G+P+T+CLA+D+EGN+ GGFTS W SGTYK DPAAFLF K +SP T+ YSQTG+ PQ AV H+S GP FGGG D F FS +TY SSA+ Y PMPI+GT GTV D FVWQVPQ G +AP +YSSD PP+ RA + P+
Sbjct: 61 VLQDYEPPSLLVLNVGGAKLRVKRSALTHVKDSKLAWMFNGRWDHWLPRDHSGHIFLDVDVKWFSPIAEYLSELSRGTAANEAYLPIMQLSDDDRLGFRACVELFGLRDIMPKQAFDSQAQVLASVACFGLESGLNLAWSALWQLLCQSSAHDATTQEFHRLYYGRPNTVCLAIDDEGNVFGGFTSEAWIAGSGTYKPDPAAFLFCKTSDSPTTRCYSQTGSYPQCAVCHHSSVGPLFGGGHDLQFIFSSAGAVAYSSAEAITYRSSASAYHPMPISGTDGTVVDFFVWQVPQAGATAPPSLTPNFDAAVPRQPACSLSYSSDGAPPVAFRATCPAWPAPS 401
BLAST of jgi.p|Trimin1|171361 vs. uniprot
Match: A0A835YIU4_9STRA (TLDc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIU4_9STRA) HSP 1 Score: 350 bits (899), Expect = 2.540e-115 Identity = 171/253 (67.59%), Postives = 194/253 (76.68%), Query Frame = 1
Query: 7 QDYKPTEVLTLNIGGAKLRLKRSALTHIEDSKLAWMFSGRWDHVLPRDHLGRIFLDLDINWFRPITDFLSELSQSAAADEAYLPIMQRSDDDRLGLQACVELFGLCDSIPAQGLAGMPQHIASVARLGQESGLKIGWSAPWQLLYQASVNGAKAREFHSWCDGKPHTLCLAMDNEGNILGGFTSVPWESSGTYKRDPAAFLFFKGVESPATQRYSQTGNSP-------------QWAVIHNSGYGPAFGGGRD 726
QD P+E+L +N+GGAKL +KRSALTH+E SKLA MFSGRWDHVLPRDH GRIFLDLDINWF PIT+ LSELS AAADE LP+MQ SDDDRLGLQAC ELFGLCD IP QG+AGMP HI SVARLGQESGL+IG APWQLLY +SV+GA A EFH CD KP+T+CLA+D++GN+ GGF VPW SSG ++RDPA FLF +G ES A QRYS +SP Q AV H+S YGP FG G D
Sbjct: 9 QDCNPSEILIINVGGAKLFVKRSALTHVEGSKLARMFSGRWDHVLPRDHSGRIFLDLDINWFHPITNLLSELSGGAAADELQLPVMQLSDDDRLGLQACAELFGLCDVIPTQGVAGMPHHITSVARLGQESGLEIGRYAPWQLLYHSSVDGATAHEFHRLCDDKPNTVCLAVDDKGNVFGGFALVPWTSSGGWQRDPAVFLFCQGSESTAVQRYSPRVSSPYYAVCHDPGWGPIQSAVFHHSSYGPVFGNGYD 261
BLAST of jgi.p|Trimin1|171361 vs. uniprot
Match: A0A835YJ41_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ41_9STRA) HSP 1 Score: 221 bits (564), Expect = 5.360e-67 Identity = 104/138 (75.36%), Postives = 121/138 (87.68%), Query Frame = 1
Query: 1150 LTSRASAPPSPLRGVHNGIVYMACWGGGQLCTMREMFKQFGRSMLANKYASDVWARNIRAAALDEDGCIVENHHHECFQKLVNVMRLRAIVRRPAFSGTVGSSKPAPMPAHLAPAMTKMLEYLMINHEQCFNALDAPV 1563
+ + AP SPL+GVH+GIVY+ CWGGGQLCTMR+ F +FG SMLANKYASDV ARNI AAALDEDGCIVE+H+HECF KLVNVMRLRAIVRRP F GTVG+SKP+PMPAHLAPAMT+ML YL I+HE+ F+ALD+P+
Sbjct: 1 MVTHPPAPLSPLKGVHDGIVYITCWGGGQLCTMRDTFTEFGGSMLANKYASDVRARNISAAALDEDGCIVEDHNHECFHKLVNVMRLRAIVRRPDFRGTVGNSKPSPMPAHLAPAMTEMLNYLAIDHERFFSALDSPL 138
BLAST of jgi.p|Trimin1|171361 vs. uniprot
Match: A0A835YNW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNW7_9STRA) HSP 1 Score: 184 bits (468), Expect = 6.010e-49 Identity = 157/526 (29.85%), Postives = 224/526 (42.59%), Query Frame = 1
Query: 7 QDYKPTEVLTLNIGGAKLRLKRSALTHIEDSKLAWMFSGRWDHVLPRDHLGRIFLDLDINWFRPITDFLSELSQSAAADEAYLPIMQRSDDDRLGLQACVELFGLCDSIPAQGLAGMPQHIASVARLGQESGLKIGWSAPWQLLYQASVNGAKAREFHSWCDGKPHTLCLAMDNEGNILGGFTSVPWESSGTYKRDPAAFLFFKGVESPATQRYSQTGNSPQWAVIHNSGYGPAFGGGRDFAFTFSRQPEGGMTYSSSANTYQPMPINGTSGTVSDLFVWQVPQIGGSAPFNYSSDSTPPLELRADMSSLTGPATSLSFHFGLWLKEQLDAYDSELQAIERQAKLFAAEKAFMQQLAPEDIDS---RKRAWLEKVGTYVRVHSVLTSRASAPPSPLR--GVHNG-------------IVYMACWGGGQLCTMREMFKQFGRSMLANKYASDVWARNIRAAALDEDGCIVENHHHECFQKLVNVMRLRAIVRR-PAFSGTVGSSKPAPMPAHLAPAMTKMLEYLMIN 1527
+DY P E+LTLN+GGA L ++RSALTH DS LAWMFSG WDHVLPRD R FLDLD++WF+PI L LS+ E +P+ + DDRLGL+AC EL GL +++ +G G+ + P ++ K F S + +P L G ++P ++ P A V +P T +S+ DM++L PA +L+ WL +++D+ + +A+++Q FA E AFM++ D+DS R RAWL++ + SAP L G +G I + G G L T R F QF S LA KYA++ W ++ A A D++G I E+H +CF++LVN+MRLRA+VRR SG + + P P AP M ML+YLM+
Sbjct: 55 EDYAPPELLTLNVGGAALTVRRSALTHFPDSPLAWMFSGCWDHVLPRDTKHRPFLDLDVSWFKPIVGALHALSRGTEPHEVVVPVAHLAHDDRLGLRACAELLGLTEALRFEG------------------GVAALTAPPXXXXSPLDIHFRKPCVFSS--EFRPVPL------------GVQTIPAAAA------PIAAPTKPVVHTPVTMTFSE-----------------------------------------------------------------------------------------DMAALAAPAAALA-RMQQWLAQEVDSIATAERALQKQNDSFALECAFMRRCGA-DMDSAGERLRAWLQQQ----------LQQRSAPAQQLEHYGSTSGNDTSTDNNDDIVSIAFTDVLGHGALSTRRATFLQFPASPLAAKYAAERWRESLSAEARDDEGRIYEDHDGDCFRRLVNIMRLRALVRRGDCPSGALDAC--CPKPEATAP-MRAMLQYLMVE 438
BLAST of jgi.p|Trimin1|171361 vs. uniprot
Match: A0A835YWT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWT2_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.380e-33 Identity = 64/113 (56.64%), Postives = 81/113 (71.68%), Query Frame = 1
Query: 7 QDYKPTEVLTLNIGGAKLRLKRSALTHIEDSKLAWMFSGRWDHVLPRDHLGRIFLDLDINWFRPITDFLSELSQSAAADEAYLPIMQRSDDDRLGLQACVELFGLCDSIPAQG 345
+DY P E+LTLN+GGA L ++RSA+TH DS LAWMFSGRWDHVLP D GR FLDLD++WF+PI L LS+ E +P+ DDRLGL+AC ELFGL +++ +G
Sbjct: 54 KDYTPPELLTLNVGGAALTVRRSAVTHFPDSPLAWMFSGRWDHVLPHDSKGRPFLDLDVSWFKPIAGALHALSRGTEPHEVVVPVAHLVHDDRLGLRACAELFGLTEALRFEG 166 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171361 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9787 ID=mRNA_9787|Name=jgi.p|Trimin1|171361|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1566bp|location=Sequence derived from alignment at Contig_81:442869..445615+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CTGATGCAGGACTACAAGCCCACCGAGGTTCTCACTCTCAACATCGGCGGback to top protein sequence of jgi.p|Trimin1|171361 >Trimin1|171361|e_gw1.81.110.1 ID=Trimin1|171361|e_gw1.81.110.1|Name=jgi.p|Trimin1|171361|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=522bp LMQDYKPTEVLTLNIGGAKLRLKRSALTHIEDSKLAWMFSGRWDHVLPRDback to top mRNA from alignment at Contig_81:442869..445615+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9787 ID=mRNA_9787|Name=jgi.p|Trimin1|171361|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2747bp|location=Sequence derived from alignment at Contig_81:442869..445615+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_81:442869..445615+ >mRNA_9787 ID=mRNA_9787|Name=jgi.p|Trimin1|171361|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1566bp|location=Sequence derived from alignment at Contig_81:442869..445615+ (Tribonema minus UTEX_B_3156 )back to top |