mRNA_9667 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|138866
Unique NamemRNA_9667
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: A0A835YMA6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMA6_9STRA)

HSP 1 Score: 514 bits (1325), Expect = 2.990e-185
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 1
Query:    1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLPVVKYSQMYPVGTVEGVDATVDDSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTFRFTSTVDFTSNPTILDKYRVKFYDVNGEDWVTSSI 702
            AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLPVVKYSQMYPVGTVEGVDATVDDSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTFRFTSTVDFTSNPTILDKYRVKFYDVNGEDWVTSSI
Sbjct:    1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLPVVKYSQMYPVGTVEGVDATVDDSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTFRFTSTVDFTSNPTILDKYRVKFYDVNGEDWVTSSI 234          
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: A0A835YLR6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLR6_9STRA)

HSP 1 Score: 404 bits (1039), Expect = 1.780e-141
Identity = 181/199 (90.95%), Postives = 188/199 (94.47%), Query Frame = 1
Query:    1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLPVVKYSQMYPVGTVEGVDATVDDSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTF 597
            AECPNACSGHG+CTF+DECDCNQGYMANDCSERICPFG AHVDGAKGDLDGDE V  +  PVV  SQMYPVG VEGVDATVDDSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGK+CGGHGVC+TVRELAN DYSNDYELWDADKGMACDCDPGYSGF+CSERECPIGVDPLYRDD +IEPRYPIWTF
Sbjct:   19 AECPNACSGHGTCTFFDECDCNQGYMANDCSERICPFGFAHVDGAKGDLDGDEQV-TTATPVVVGSQMYPVGAVEGVDATVDDSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKMCGGHGVCRTVRELANGDYSNDYELWDADKGMACDCDPGYSGFNCSERECPIGVDPLYRDDTEIEPRYPIWTF 216          
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: A0A835ZGV2_9STRA (Tubular mastigoneme-related protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGV2_9STRA)

HSP 1 Score: 366 bits (940), Expect = 1.040e-120
Identity = 168/236 (71.19%), Postives = 187/236 (79.24%), Query Frame = 1
Query:    1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLPVVKYSQMYPVGTVEGVDATVDDSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTFRFT--STVDFTSNPTILDKYRVKFYDVNGEDWVTSSI 702
            AECPNACSGHG+C  +DECDC  GYMANDCS+RICPFG AHVDG KGDLDGD   D + L V+K SQMYP GTVEG+ A   D+AH YMECSNKG+CDR++GTCKCFPAYEG+ACQRASCP V GK CGGHGVC+TVREL   DYSNDYELWDAD GM C CD GYSG+DCS+R CPIGVDPLY D+ +I PRYP+W FRF+  S  D TS       +RVKFYD  GEDWVTS I
Sbjct:   23 AECPNACSGHGTCNTHDECDCYTGYMANDCSQRICPFGNAHVDGGKGDLDGDNVFDGTTL-VIKTSQMYPAGTVEGIAAVDYDAAHFYMECSNKGLCDRSSGTCKCFPAYEGHACQRASCPVVGGKACGGHGVCRTVRELVEDDYSNDYELWDADVGMGCACDAGYSGYDCSQRHCPIGVDPLYADEPEINPRYPMWNFRFSGGSPFDHTSG-----SFRVKFYDAYGEDWVTSPI 252          
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: D7FGQ5_ECTSI (Tubular mastigoneme-related protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGQ5_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 8.690e-85
Identity = 138/241 (57.26%), Postives = 161/241 (66.80%), Query Frame = 1
Query:    1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLPVVKYSQMYPVGTVE------GVDAT-VDDSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTFRFTSTVDFTSNPTILDKYRVKFYDVNGEDWVTSSI 702
            AECPNACSG G+C  YD C C  GYMANDCSER+CPFG AHVD  KGDL+ D ++      V++ SQMY  GT E       V+ T VD++AH YMECSNKG+CDRTT TC CF  YEG +CQRASCP      C GHGVCKT RELA  D+ N YELWDAD  +AC CD GY  +DCSER CP G+DPL+ DD     R P WT RF   +D T    +   +R++F DV GEDWVT+ I
Sbjct:   21 AECPNACSGRGTCGAYDMCTCYSGYMANDCSERVCPFGLAHVDSPKGDLNMDNELQYRPA-VIEGSQMYKDGTSELFPIMATVNGTIVDNTAHYYMECSNKGLCDRTTATCTCFVGYEGTSCQRASCP----NDCSGHGVCKTNRELAADDHDNIYELWDADMSLACHCDAGYGSYDCSERMCPYGIDPLFIDDENTA-RIPEWTIRFEDALDVTG---VEGTWRLRFNDVFGEDWVTNPI 252          
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: A6P4C0_OCHDN (Tubular mastigoneme protein n=1 Tax=Ochromonas danica TaxID=2986 RepID=A6P4C0_OCHDN)

HSP 1 Score: 253 bits (647), Expect = 3.040e-76
Identity = 125/247 (50.61%), Postives = 157/247 (63.56%), Query Frame = 1
Query:    1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLPVVKYSQMYPVGTVEGVDA-------TVDDSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTFRF----TSTVDFTSNPTILDK--YRVKFYDVNGEDWVTSSI 702
            +EC NAC+GHG CT YD C CN+ + A+DCSER+C FG AHVD  KGDLDG   +  + + V + S +YP GT E           T+ ++AH YMECSNKG CDRTTG C+CF  Y+G ACQRASCP      C GHGVCKT+ +LA +DY N Y+LWD D  M C+CD GY+G DCSER C  GVDPLY DD     +Y I+        TS+  FT+  +      + ++FYD + EDWVT+ I
Sbjct:   21 SECANACNGHGKCTSYDMCICNRNWQASDCSERVCMFGLAHVDTPKGDLDGSGTLSNANIVVTENSFVYPYGTTEQFPQMQDSDLQTLTNTAHYYMECSNKGRCDRTTGECQCFDGYDGVACQRASCPGYPNS-CSGHGVCKTISQLAESDYGNVYKLWDKDATMGCECDKGYTGADCSERLCKYGVDPLYLDDATTA-KYSIFDLATLTTKTSSPYFTNGESEAKSAYWAIRFYDNHEEDWVTTPI 265          
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: A0A7S3GPH1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GPH1_9STRA)

HSP 1 Score: 249 bits (637), Expect = 6.870e-75
Identity = 124/243 (51.03%), Postives = 152/243 (62.55%), Query Frame = 1
Query:    1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSG--LPVVKYSQMYPVGTVEGVDATVD-------DSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTFRFTSTVDFTSNPTILDKYRVKFYDVNGEDWVTSSI 702
            AECPNACS HG C  YD C C + +M+NDCSERIC FG AHVD  KGDLD      +SG   PVV    +YP GT E   AT+D       ++AH Y ECSNKG+CDR TG C CF  Y+G ACQRASCP     VC GHG C++++++A  D++N Y+LWD D  M C CD GY+G DCSER C  G DPLY DD Q   R+  +T++   T    +  T+   Y + FYD  GEDW T +I
Sbjct:   40 AECPNACSAHGKCGAYDMCLCFRNWMSNDCSERICQFGLAHVDTPKGDLDSSAGA-LSGPSSPVVANDAVYPFGTTEQYPATMDLDGNVLSNTAHEYRECSNKGMCDRQTGNCACFEGYDGSACQRASCPTNADGVCSGHGTCESIKDIAARDFNNIYKLWDEDATMGCVCDGGYAGSDCSERVCKFGADPLYYDDSQ-NIRFSNFTYQIYHTS--LTPVTLTGNYSIVFYDAYGEDWQTPAI 278          
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: A0A7S2F5G6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F5G6_9STRA)

HSP 1 Score: 238 bits (606), Expect = 4.560e-72
Identity = 123/252 (48.81%), Postives = 152/252 (60.32%), Query Frame = 1
Query:    1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSG--LPVVKYSQMYPVGTVEGVDATVD-------DSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDD---------LQIEPRYPIWTFRFTSTVDFTSNPTILDKYRVKFYDVNGEDWVTSSI 702
            AECPNACSG G+C  +D+C C   Y   DCS R CPF  AHVD  KGDLDG  D  +SG   PV++ S +YP GT E   A  D       ++AH YMEC NKGICDR +G C+CF  YEG  C+RASCP      C GHG C+ ++ LA  DY+N Y+LWDA+  M C CD GY G DCS R CP+G+DPLY DD         ++IE    + ++   ST +     T    Y +KFYDV GED++TS I
Sbjct:   34 AECPNACSGAGTCGKFDQCTCYPNYQGADCSLRTCPFELAHVDTPKGDLDGSADA-LSGPRYPVIQKSTVYPYGTTEQFPAMTDSIGQIRLNTAHYYMECGNKGICDRKSGECECFDGYEGAGCKRASCP----NDCSGHGTCEHIKTLAELDYNNMYDLWDAEMTMGCSCDAGYYGPDCSSRRCPMGIDPLYLDDTTARVQTTNIKIE---GVQSWNAPSTNELQLEGT----YAIKFYDVFGEDYLTSPI 273          
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: A0A067BL13_SAPPC (EGF-like domain-containing protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BL13_SAPPC)

HSP 1 Score: 211 bits (537), Expect = 9.120e-64
Identity = 116/254 (45.67%), Postives = 146/254 (57.48%), Query Frame = 1
Query:    1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLPVVKYSQMYPVGTVEGVDATVD-DSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELA-NADYS------------NDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIW-TFRFTSTVDFTS-NPTILDKYR----VKFYDVNGEDWVTSSI 702
            AECP  CSG+G C   D C C + +M NDC++RICPFG AHVD  KGD++ D  ++  G  ++  SQMYP GT E   AT   D AH YMECSN+GICDR TG C C+P YEG ACQRA CP      C   GVCK++ ++A N D S              Y LWDAD G  C CDPG+ G DCS+R C +GVDPLY         YPI+ TF   +     + +P  LD  +    ++ +D  GE ++T  I
Sbjct:   20 AECPGGCSGNGVCGPRDMCTCFKNFMGNDCAQRICPFGFAHVDTPKGDINMDRVMNSPGT-ILLNSQMYPGGTYEWTKATAAIDEAHFYMECSNEGICDRVTGLCICYPGYEGSACQRAKCP----NACNNRGVCKSMAQVAANGDRSLSITGNPKDNVKTAYTLWDADAGFQCVCDPGFEGPDCSKRSCKVGVDPLYE-----AAGYPIYETFNIIAMATLAAADPDALDATKSWIQLRVFDHEGESYLTRRI 263          
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: A0A8J2SA68_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SA68_9STRA)

HSP 1 Score: 215 bits (548), Expect = 5.460e-62
Identity = 115/263 (43.73%), Postives = 141/263 (53.61%), Query Frame = 1
Query:    1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLP--------VVKYSQMYPVGTVEGVDATVD-------DSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTFRFTSTVDFTSNPTILDK--------------YRVKFYDVNGEDWVTSSI 702
            AECPNACSGHGSC  +DEC C   +   DCS R CPF  AHVD  KGDLDG  D  +SG          VV  S +YP GT E      D       ++ HAY EC NKGICDR +G C+CFP Y G  CQ+A+C       C GHG+C   + LA  D+ N Y LWDA+ G +C C+PGYSG  C+ + C  G+DPLY DD  +  R P     F S  + T    + D               Y +KFYD  GED+ T+ +
Sbjct:   15 AECPNACSGHGSCGAFDECACFPNWQEADCSGRTCPFAAAHVDTPKGDLDGSADA-LSGPAAGVNTVNNVVVGSMVYPHGTTEQYPYMADSAGTQLTNTGHAYAECGNKGICDRGSGECECFPGYAGAGCQKATCA---DPTCSGHGICMNAQNLAAQDHDNVYNLWDAEVGFSCLCEPGYSGPTCASKMCKYGIDPLYYDDDVMAVRAPTARVSF-SVGNLTGTKAVGDAAAFGAARKSFLEGTYAIKFYDAFGEDYETAPL 272          
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: F0Y2Q2_AURAN (Uncharacterized protein (Fragment) n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2Q2_AURAN)

HSP 1 Score: 200 bits (509), Expect = 1.070e-61
Identity = 96/177 (54.24%), Postives = 111/177 (62.71%), Query Frame = 1
Query:    1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLP--VVKYSQMYPVGTVEGVDATVD-------DSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSG 504
            AECPNACSGHG+C  +DEC C   +   DCS R CPF  AHVD  KGDLDG  D  +SG    V+  S +YP GT E     VD       ++AHAY EC NKGICDR +G C+CFP YEG  CQRASCP      C GHG C + ++LA AD+ N Y LWD D  M C C+PGYSG
Sbjct:   17 AECPNACSGHGTCGAFDECHCYPNWQEADCSGRTCPFALAHVDSPKGDLDGSADA-LSGTSSVVITESTVYPYGTTEQYPLMVDTFGRELKNTAHAYAECGNKGICDRKSGECECFPGYEGAGCQRASCPDPS---CSGHGTCMSAKDLATADFDNVYRLWDKDVSMGCKCEPGYSG 189          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YMA6_9STRA2.990e-185100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YLR6_9STRA1.780e-14190.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZGV2_9STRA1.040e-12071.19Tubular mastigoneme-related protein n=1 Tax=Tribon... [more]
D7FGQ5_ECTSI8.690e-8557.26Tubular mastigoneme-related protein n=2 Tax=Ectoca... [more]
A6P4C0_OCHDN3.040e-7650.61Tubular mastigoneme protein n=1 Tax=Ochromonas dan... [more]
A0A7S3GPH1_9STRA6.870e-7551.03Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2F5G6_9STRA4.560e-7248.81Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A067BL13_SAPPC9.120e-6445.67EGF-like domain-containing protein (Fragment) n=1 ... [more]
A0A8J2SA68_9STRA5.460e-6243.73Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0Y2Q2_AURAN1.070e-6154.24Uncharacterized protein (Fragment) n=2 Tax=Aureoco... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_66contigContig_66:260282..260983 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|138866|gw1.66.106.1
Descriptionregulation of canonical Wnt signaling pathway involved in osteoblast differentiation
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsKOG1225@1|root,KOG1225@2759|Eukaryota
Evalue1.42e-85
Seed ortholog2880.D7FGQ5
Hectar predicted targeting categoryother localisation
TranscriptId139188
TrackFilteredModels1
ProteinId138866
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|138866gene_9667Tribonema minus UTEX_B_3156 geneContig_66 260282..260983 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9667_1exon_9667_1Tribonema minus UTEX_B_3156 exonContig_66 260282..260983 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9667CDS_9667Tribonema minus UTEX_B_3156 CDSContig_66 260282..260983 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|138866Trimin1|138866|gw1.66.106.1Tribonema minus UTEX_B_3156 polypeptideContig_66 260282..260983 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9667 ID=mRNA_9667|Name=jgi.p|Trimin1|138866|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=702bp|location=Sequence derived from alignment at Contig_66:260282..260983+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCTGAGTGTCCAAATGCTTGCTCAGGGCATGGGTCGTGCACCTTCTACGA
CGAGTGCGACTGCAACCAGGGCTACATGGCCAACGACTGCTCGGAGCGCA
TCTGCCCCTTTGGCACCGCCCACGTCGACGGAGCGAAGGGAGACCTCGAC
GGCGACGAGGATGTTGATGTCTCCGGGCTGCCGGTGGTCAAGTACTCGCA
GATGTACCCGGTTGGTACAGTCGAGGGCGTGGATGCAACGGTCGACGACT
CAGCGCACGCGTACATGGAGTGCTCCAACAAGGGCATCTGCGACAGGACG
ACGGGCACGTGCAAGTGCTTCCCTGCCTACGAGGGCTACGCCTGCCAGCG
CGCCTCTTGCCCAGCGGTGGACGGCAAGGTGTGTGGGGGGCACGGCGTGT
GCAAAACGGTCCGGGAGCTCGCCAACGCCGACTACAGCAACGACTACGAG
CTCTGGGACGCCGACAAGGGCATGGCGTGCGACTGCGACCCCGGCTACAG
CGGCTTCGACTGCTCCGAGCGGGAGTGCCCAATCGGCGTGGACCCGCTGT
ATAGGGACGACTTGCAGATCGAGCCGCGCTACCCCATCTGGACCTTCCGC
TTCACGAGCACAGTAGACTTCACCAGCAATCCCACCATTCTGGACAAGTA
TCGTGTCAAGTTCTACGACGTGAACGGAGAGGACTGGGTCACTTCCAGCA
TC
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protein sequence of jgi.p|Trimin1|138866

>Trimin1|138866|gw1.66.106.1 ID=Trimin1|138866|gw1.66.106.1|Name=jgi.p|Trimin1|138866|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=234bp
AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLD
GDEDVDVSGLPVVKYSQMYPVGTVEGVDATVDDSAHAYMECSNKGICDRT
TGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYE
LWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTFR
FTSTVDFTSNPTILDKYRVKFYDVNGEDWVTSSI
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mRNA from alignment at Contig_66:260282..260983+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9667 ID=mRNA_9667|Name=jgi.p|Trimin1|138866|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=702bp|location=Sequence derived from alignment at Contig_66:260282..260983+ (Tribonema minus UTEX_B_3156 )
GCTGAGTGTCCAAATGCTTGCTCAGGGCATGGGTCGTGCACCTTCTACGA CGAGTGCGACTGCAACCAGGGCTACATGGCCAACGACTGCTCGGAGCGCA TCTGCCCCTTTGGCACCGCCCACGTCGACGGAGCGAAGGGAGACCTCGAC GGCGACGAGGATGTTGATGTCTCCGGGCTGCCGGTGGTCAAGTACTCGCA GATGTACCCGGTTGGTACAGTCGAGGGCGTGGATGCAACGGTCGACGACT CAGCGCACGCGTACATGGAGTGCTCCAACAAGGGCATCTGCGACAGGACG ACGGGCACGTGCAAGTGCTTCCCTGCCTACGAGGGCTACGCCTGCCAGCG CGCCTCTTGCCCAGCGGTGGACGGCAAGGTGTGTGGGGGGCACGGCGTGT GCAAAACGGTCCGGGAGCTCGCCAACGCCGACTACAGCAACGACTACGAG CTCTGGGACGCCGACAAGGGCATGGCGTGCGACTGCGACCCCGGCTACAG CGGCTTCGACTGCTCCGAGCGGGAGTGCCCAATCGGCGTGGACCCGCTGT ATAGGGACGACTTGCAGATCGAGCCGCGCTACCCCATCTGGACCTTCCGC TTCACGAGCACAGTAGACTTCACCAGCAATCCCACCATTCTGGACAAGTA TCGTGTCAAGTTCTACGACGTGAACGGAGAGGACTGGGTCACTTCCAGCA TC
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Coding sequence (CDS) from alignment at Contig_66:260282..260983+

>mRNA_9667 ID=mRNA_9667|Name=jgi.p|Trimin1|138866|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=702bp|location=Sequence derived from alignment at Contig_66:260282..260983+ (Tribonema minus UTEX_B_3156 )
GCTGAGTGTCCAAATGCTTGCTCAGGGCATGGGTCGTGCACCTTCTACGA
CGAGTGCGACTGCAACCAGGGCTACATGGCCAACGACTGCTCGGAGCGCA
TCTGCCCCTTTGGCACCGCCCACGTCGACGGAGCGAAGGGAGACCTCGAC
GGCGACGAGGATGTTGATGTCTCCGGGCTGCCGGTGGTCAAGTACTCGCA
GATGTACCCGGTTGGTACAGTCGAGGGCGTGGATGCAACGGTCGACGACT
CAGCGCACGCGTACATGGAGTGCTCCAACAAGGGCATCTGCGACAGGACG
ACGGGCACGTGCAAGTGCTTCCCTGCCTACGAGGGCTACGCCTGCCAGCG
CGCCTCTTGCCCAGCGGTGGACGGCAAGGTGTGTGGGGGGCACGGCGTGT
GCAAAACGGTCCGGGAGCTCGCCAACGCCGACTACAGCAACGACTACGAG
CTCTGGGACGCCGACAAGGGCATGGCGTGCGACTGCGACCCCGGCTACAG
CGGCTTCGACTGCTCCGAGCGGGAGTGCCCAATCGGCGTGGACCCGCTGT
ATAGGGACGACTTGCAGATCGAGCCGCGCTACCCCATCTGGACCTTCCGC
TTCACGAGCACAGTAGACTTCACCAGCAATCCCACCATTCTGGACAAGTA
TCGTGTCAAGTTCTACGACGTGAACGGAGAGGACTGGGTCACTTCCAGCA
TC
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