mRNA_9667 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: A0A835YMA6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMA6_9STRA) HSP 1 Score: 514 bits (1325), Expect = 2.990e-185 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 1 Query: 1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLPVVKYSQMYPVGTVEGVDATVDDSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTFRFTSTVDFTSNPTILDKYRVKFYDVNGEDWVTSSI 702 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLPVVKYSQMYPVGTVEGVDATVDDSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTFRFTSTVDFTSNPTILDKYRVKFYDVNGEDWVTSSI Sbjct: 1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLPVVKYSQMYPVGTVEGVDATVDDSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTFRFTSTVDFTSNPTILDKYRVKFYDVNGEDWVTSSI 234
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: A0A835YLR6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLR6_9STRA) HSP 1 Score: 404 bits (1039), Expect = 1.780e-141 Identity = 181/199 (90.95%), Postives = 188/199 (94.47%), Query Frame = 1 Query: 1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLPVVKYSQMYPVGTVEGVDATVDDSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTF 597 AECPNACSGHG+CTF+DECDCNQGYMANDCSERICPFG AHVDGAKGDLDGDE V + PVV SQMYPVG VEGVDATVDDSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGK+CGGHGVC+TVRELAN DYSNDYELWDADKGMACDCDPGYSGF+CSERECPIGVDPLYRDD +IEPRYPIWTF Sbjct: 19 AECPNACSGHGTCTFFDECDCNQGYMANDCSERICPFGFAHVDGAKGDLDGDEQV-TTATPVVVGSQMYPVGAVEGVDATVDDSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKMCGGHGVCRTVRELANGDYSNDYELWDADKGMACDCDPGYSGFNCSERECPIGVDPLYRDDTEIEPRYPIWTF 216
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: A0A835ZGV2_9STRA (Tubular mastigoneme-related protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGV2_9STRA) HSP 1 Score: 366 bits (940), Expect = 1.040e-120 Identity = 168/236 (71.19%), Postives = 187/236 (79.24%), Query Frame = 1 Query: 1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLPVVKYSQMYPVGTVEGVDATVDDSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTFRFT--STVDFTSNPTILDKYRVKFYDVNGEDWVTSSI 702 AECPNACSGHG+C +DECDC GYMANDCS+RICPFG AHVDG KGDLDGD D + L V+K SQMYP GTVEG+ A D+AH YMECSNKG+CDR++GTCKCFPAYEG+ACQRASCP V GK CGGHGVC+TVREL DYSNDYELWDAD GM C CD GYSG+DCS+R CPIGVDPLY D+ +I PRYP+W FRF+ S D TS +RVKFYD GEDWVTS I Sbjct: 23 AECPNACSGHGTCNTHDECDCYTGYMANDCSQRICPFGNAHVDGGKGDLDGDNVFDGTTL-VIKTSQMYPAGTVEGIAAVDYDAAHFYMECSNKGLCDRSSGTCKCFPAYEGHACQRASCPVVGGKACGGHGVCRTVRELVEDDYSNDYELWDADVGMGCACDAGYSGYDCSQRHCPIGVDPLYADEPEINPRYPMWNFRFSGGSPFDHTSG-----SFRVKFYDAYGEDWVTSPI 252
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: D7FGQ5_ECTSI (Tubular mastigoneme-related protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGQ5_ECTSI) HSP 1 Score: 275 bits (704), Expect = 8.690e-85 Identity = 138/241 (57.26%), Postives = 161/241 (66.80%), Query Frame = 1 Query: 1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLPVVKYSQMYPVGTVE------GVDAT-VDDSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTFRFTSTVDFTSNPTILDKYRVKFYDVNGEDWVTSSI 702 AECPNACSG G+C YD C C GYMANDCSER+CPFG AHVD KGDL+ D ++ V++ SQMY GT E V+ T VD++AH YMECSNKG+CDRTT TC CF YEG +CQRASCP C GHGVCKT RELA D+ N YELWDAD +AC CD GY +DCSER CP G+DPL+ DD R P WT RF +D T + +R++F DV GEDWVT+ I Sbjct: 21 AECPNACSGRGTCGAYDMCTCYSGYMANDCSERVCPFGLAHVDSPKGDLNMDNELQYRPA-VIEGSQMYKDGTSELFPIMATVNGTIVDNTAHYYMECSNKGLCDRTTATCTCFVGYEGTSCQRASCP----NDCSGHGVCKTNRELAADDHDNIYELWDADMSLACHCDAGYGSYDCSERMCPYGIDPLFIDDENTA-RIPEWTIRFEDALDVTG---VEGTWRLRFNDVFGEDWVTNPI 252
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: A6P4C0_OCHDN (Tubular mastigoneme protein n=1 Tax=Ochromonas danica TaxID=2986 RepID=A6P4C0_OCHDN) HSP 1 Score: 253 bits (647), Expect = 3.040e-76 Identity = 125/247 (50.61%), Postives = 157/247 (63.56%), Query Frame = 1 Query: 1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLPVVKYSQMYPVGTVEGVDA-------TVDDSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTFRF----TSTVDFTSNPTILDK--YRVKFYDVNGEDWVTSSI 702 +EC NAC+GHG CT YD C CN+ + A+DCSER+C FG AHVD KGDLDG + + + V + S +YP GT E T+ ++AH YMECSNKG CDRTTG C+CF Y+G ACQRASCP C GHGVCKT+ +LA +DY N Y+LWD D M C+CD GY+G DCSER C GVDPLY DD +Y I+ TS+ FT+ + + ++FYD + EDWVT+ I Sbjct: 21 SECANACNGHGKCTSYDMCICNRNWQASDCSERVCMFGLAHVDTPKGDLDGSGTLSNANIVVTENSFVYPYGTTEQFPQMQDSDLQTLTNTAHYYMECSNKGRCDRTTGECQCFDGYDGVACQRASCPGYPNS-CSGHGVCKTISQLAESDYGNVYKLWDKDATMGCECDKGYTGADCSERLCKYGVDPLYLDDATTA-KYSIFDLATLTTKTSSPYFTNGESEAKSAYWAIRFYDNHEEDWVTTPI 265
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: A0A7S3GPH1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GPH1_9STRA) HSP 1 Score: 249 bits (637), Expect = 6.870e-75 Identity = 124/243 (51.03%), Postives = 152/243 (62.55%), Query Frame = 1 Query: 1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSG--LPVVKYSQMYPVGTVEGVDATVD-------DSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTFRFTSTVDFTSNPTILDKYRVKFYDVNGEDWVTSSI 702 AECPNACS HG C YD C C + +M+NDCSERIC FG AHVD KGDLD +SG PVV +YP GT E AT+D ++AH Y ECSNKG+CDR TG C CF Y+G ACQRASCP VC GHG C++++++A D++N Y+LWD D M C CD GY+G DCSER C G DPLY DD Q R+ +T++ T + T+ Y + FYD GEDW T +I Sbjct: 40 AECPNACSAHGKCGAYDMCLCFRNWMSNDCSERICQFGLAHVDTPKGDLDSSAGA-LSGPSSPVVANDAVYPFGTTEQYPATMDLDGNVLSNTAHEYRECSNKGMCDRQTGNCACFEGYDGSACQRASCPTNADGVCSGHGTCESIKDIAARDFNNIYKLWDEDATMGCVCDGGYAGSDCSERVCKFGADPLYYDDSQ-NIRFSNFTYQIYHTS--LTPVTLTGNYSIVFYDAYGEDWQTPAI 278
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: A0A7S2F5G6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F5G6_9STRA) HSP 1 Score: 238 bits (606), Expect = 4.560e-72 Identity = 123/252 (48.81%), Postives = 152/252 (60.32%), Query Frame = 1 Query: 1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSG--LPVVKYSQMYPVGTVEGVDATVD-------DSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDD---------LQIEPRYPIWTFRFTSTVDFTSNPTILDKYRVKFYDVNGEDWVTSSI 702 AECPNACSG G+C +D+C C Y DCS R CPF AHVD KGDLDG D +SG PV++ S +YP GT E A D ++AH YMEC NKGICDR +G C+CF YEG C+RASCP C GHG C+ ++ LA DY+N Y+LWDA+ M C CD GY G DCS R CP+G+DPLY DD ++IE + ++ ST + T Y +KFYDV GED++TS I Sbjct: 34 AECPNACSGAGTCGKFDQCTCYPNYQGADCSLRTCPFELAHVDTPKGDLDGSADA-LSGPRYPVIQKSTVYPYGTTEQFPAMTDSIGQIRLNTAHYYMECGNKGICDRKSGECECFDGYEGAGCKRASCP----NDCSGHGTCEHIKTLAELDYNNMYDLWDAEMTMGCSCDAGYYGPDCSSRRCPMGIDPLYLDDTTARVQTTNIKIE---GVQSWNAPSTNELQLEGT----YAIKFYDVFGEDYLTSPI 273
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: A0A067BL13_SAPPC (EGF-like domain-containing protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BL13_SAPPC) HSP 1 Score: 211 bits (537), Expect = 9.120e-64 Identity = 116/254 (45.67%), Postives = 146/254 (57.48%), Query Frame = 1 Query: 1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLPVVKYSQMYPVGTVEGVDATVD-DSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELA-NADYS------------NDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIW-TFRFTSTVDFTS-NPTILDKYR----VKFYDVNGEDWVTSSI 702 AECP CSG+G C D C C + +M NDC++RICPFG AHVD KGD++ D ++ G ++ SQMYP GT E AT D AH YMECSN+GICDR TG C C+P YEG ACQRA CP C GVCK++ ++A N D S Y LWDAD G C CDPG+ G DCS+R C +GVDPLY YPI+ TF + + +P LD + ++ +D GE ++T I Sbjct: 20 AECPGGCSGNGVCGPRDMCTCFKNFMGNDCAQRICPFGFAHVDTPKGDINMDRVMNSPGT-ILLNSQMYPGGTYEWTKATAAIDEAHFYMECSNEGICDRVTGLCICYPGYEGSACQRAKCP----NACNNRGVCKSMAQVAANGDRSLSITGNPKDNVKTAYTLWDADAGFQCVCDPGFEGPDCSKRSCKVGVDPLYE-----AAGYPIYETFNIIAMATLAAADPDALDATKSWIQLRVFDHEGESYLTRRI 263
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: A0A8J2SA68_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SA68_9STRA) HSP 1 Score: 215 bits (548), Expect = 5.460e-62 Identity = 115/263 (43.73%), Postives = 141/263 (53.61%), Query Frame = 1 Query: 1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLP--------VVKYSQMYPVGTVEGVDATVD-------DSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSGFDCSERECPIGVDPLYRDDLQIEPRYPIWTFRFTSTVDFTSNPTILDK--------------YRVKFYDVNGEDWVTSSI 702 AECPNACSGHGSC +DEC C + DCS R CPF AHVD KGDLDG D +SG VV S +YP GT E D ++ HAY EC NKGICDR +G C+CFP Y G CQ+A+C C GHG+C + LA D+ N Y LWDA+ G +C C+PGYSG C+ + C G+DPLY DD + R P F S + T + D Y +KFYD GED+ T+ + Sbjct: 15 AECPNACSGHGSCGAFDECACFPNWQEADCSGRTCPFAAAHVDTPKGDLDGSADA-LSGPAAGVNTVNNVVVGSMVYPHGTTEQYPYMADSAGTQLTNTGHAYAECGNKGICDRGSGECECFPGYAGAGCQKATCA---DPTCSGHGICMNAQNLAAQDHDNVYNLWDAEVGFSCLCEPGYSGPTCASKMCKYGIDPLYYDDDVMAVRAPTARVSF-SVGNLTGTKAVGDAAAFGAARKSFLEGTYAIKFYDAFGEDYETAPL 272
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Match: F0Y2Q2_AURAN (Uncharacterized protein (Fragment) n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2Q2_AURAN) HSP 1 Score: 200 bits (509), Expect = 1.070e-61 Identity = 96/177 (54.24%), Postives = 111/177 (62.71%), Query Frame = 1 Query: 1 AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDGDEDVDVSGLP--VVKYSQMYPVGTVEGVDATVD-------DSAHAYMECSNKGICDRTTGTCKCFPAYEGYACQRASCPAVDGKVCGGHGVCKTVRELANADYSNDYELWDADKGMACDCDPGYSG 504 AECPNACSGHG+C +DEC C + DCS R CPF AHVD KGDLDG D +SG V+ S +YP GT E VD ++AHAY EC NKGICDR +G C+CFP YEG CQRASCP C GHG C + ++LA AD+ N Y LWD D M C C+PGYSG Sbjct: 17 AECPNACSGHGTCGAFDECHCYPNWQEADCSGRTCPFALAHVDSPKGDLDGSADA-LSGTSSVVITESTVYPYGTTEQYPLMVDTFGRELKNTAHAYAECGNKGICDRKSGECECFPGYEGAGCQRASCPDPS---CSGHGTCMSAKDLATADFDNVYRLWDKDVSMGCKCEPGYSG 189 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|138866 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9667 ID=mRNA_9667|Name=jgi.p|Trimin1|138866|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=702bp|location=Sequence derived from alignment at Contig_66:260282..260983+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GCTGAGTGTCCAAATGCTTGCTCAGGGCATGGGTCGTGCACCTTCTACGAback to top protein sequence of jgi.p|Trimin1|138866 >Trimin1|138866|gw1.66.106.1 ID=Trimin1|138866|gw1.66.106.1|Name=jgi.p|Trimin1|138866|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=234bp AECPNACSGHGSCTFYDECDCNQGYMANDCSERICPFGTAHVDGAKGDLDback to top mRNA from alignment at Contig_66:260282..260983+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9667 ID=mRNA_9667|Name=jgi.p|Trimin1|138866|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=702bp|location=Sequence derived from alignment at Contig_66:260282..260983+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_66:260282..260983+ >mRNA_9667 ID=mRNA_9667|Name=jgi.p|Trimin1|138866|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=702bp|location=Sequence derived from alignment at Contig_66:260282..260983+ (Tribonema minus UTEX_B_3156 )back to top |