mRNA_9620 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|348665 vs. uniprot
Match: A0A835YZ66_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ66_9STRA) HSP 1 Score: 750 bits (1937), Expect = 9.500e-272 Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 1
Query: 1 MCPNNHDHPWDNMIREGIHMHPLVDLIHSDRHKEADYIIHIADREEQMREEEGGRVCPGPFPKKTLVMDETDRPYLAIDESWQKDVEIADVSYLRTKYLALFKRSFVEKDTSEPVKQLLGFRVPASTRPSQFPIQYPILQKFLREGSFPQWEQRKLDISTLLRDEFYEQDQPEGTVKTGARSIAQQWMQKYVDEHNITRYHRGTNDGDRGEADRGYFEVLWETKILVTCNPSFWEGDHRTGEALAAGAMVLVDIIXXXXXXXXXXXXXXXMWAPRQFPLISGWHAILYDASDEEDFMDKLHYYHTHDDEARKVAARGLYHAQRYFNTATFVDYVLITAEELTGRAAKHEYVRTGLQVLKDFNHMYDIQQRSIYPWRR 1131
MCPNNHDHPWDNMIREGIHMHPLVDLIHSDRHKEADYIIHIADREEQMREEEGGRVCPGPFPKKTLVMDETDRPYLAIDESWQKDVEIADVSYLRTKYLALFKRSFVEKDTSEPVKQLLGFRVPASTRPSQFPIQYPILQKFLREGSFPQWEQRKLDISTLLRDEFYEQDQPEGTVKTGARSIAQQWMQKYVDEHNITRYHRGTNDGDRGEADRGYFEVLWETKILVTCNPSFWEGDHRTGEALAAGAMVLVDIIXXXXXXXXXXXXXXXMWAPRQFPLISGWHAILYDASDEEDFMDKLHYYHTHDDEARKVAARGLYHAQRYFNTATFVDYVLITAEELTGRAAKHEYVRTGLQVLKDFNHMYDIQQRSIYPWRR
Sbjct: 1 MCPNNHDHPWDNMIREGIHMHPLVDLIHSDRHKEADYIIHIADREEQMREEEGGRVCPGPFPKKTLVMDETDRPYLAIDESWQKDVEIADVSYLRTKYLALFKRSFVEKDTSEPVKQLLGFRVPASTRPSQFPIQYPILQKFLREGSFPQWEQRKLDISTLLRDEFYEQDQPEGTVKTGARSIAQQWMQKYVDEHNITRYHRGTNDGDRGEADRGYFEVLWETKILVTCNPSFWEGDHRTGEALAAGAMVLVDIIXXXXXXXXXXXXXXXMWAPRQFPLISGWHAILYDASDEEDFMDKLHYYHTHDDEARKVAARGLYHAQRYFNTATFVDYVLITAEELTGRAAKHEYVRTGLQVLKDFNHMYDIQQRSIYPWRR 377
BLAST of jgi.p|Trimin1|348665 vs. uniprot
Match: A0A836C6J7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6J7_9STRA) HSP 1 Score: 516 bits (1329), Expect = 2.440e-178 Identity = 267/449 (59.47%), Postives = 315/449 (70.16%), Query Frame = 1
Query: 7 PNNHDHPWDNMIREGIHMHPLVDLIHSDRHKEADYIIHIADREEQMREEEGGRVCPGPFPKKTLVMDETDRPYLAIDESWQKDVEIADV--SYLRTKYLALFKRSFVEKDTSEPVKQLLGFRVPASTRPSQFPIQYPILQKFLREGSFPQWEQRKLDISTLLRDEFYEQDQPEGT----VKTGARSIAQQWMQKYVDEHNITRYHRGTNDGDRGEADRGYFEVLWETKILVTCNPSFWEGDHRTGEALAAGAMVLVDIIXXXXXXXXXXXXXXXMWAPRQFPLISGWHAILYDASDEEDFMDKLHYYHTHDDEARKVAARGLYHAQRYFNTATFVDYVLITAEELTGRAAKHEYVRTGLQ--------------------------------------------------------------------VLKDFNHMYDIQQRSIYPWRR 1131
P NH +REGIHMHPL+DLIHSDRH++ADYI +IA+R+EQMR+EE GRVCPGPFP KTL+MDE+D L ++ +W ++ + + SY +TKYLA FKRSFV KDTSE VKQLLGF V A+TRPS+FPIQYPILQ+FLREGSFPQW +RKLDI+TLLRD+FYE + EG+ VK GAR++AQ+ MQ+Y+DEHNIT Y+ GTNDG+RGE +RGYFEVLW+TK+LVTCNPSFWEGDHRTGEAL+AGAMV+VD+ MWAPRQFPLISGWH ++YDASDE+DFMDK+HYY+TH DEARK+AARGLYHAQRY NT TFVDY LITAEELTGRAAK+EYVRTGL VLKD+NHMYDI QR+ YPWRR
Sbjct: 10 PRNHA----PQVREGIHMHPLLDLIHSDRHEDADYIFYIANRDEQMRDEEDGRVCPGPFPNKTLIMDESDGTDLNVEGAWVEEADDSAPWHSYKKTKYLAWFKRSFVNKDTSEYVKQLLGFDVTATTRPSKFPIQYPILQRFLREGSFPQWHERKLDIATLLRDDFYE-EYAEGSGAENVKVGARTMAQRRMQRYIDEHNITNYYHGTNDGNRGETNRGYFEVLWDTKLLVTCNPSFWEGDHRTGEALSAGAMVVVDL----------------MWAPRQFPLISGWHIVMYDASDEQDFMDKVHYYYTHQDEARKIAARGLYHAQRYLNTVTFVDYALITAEELTGRAAKNEYVRTGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLKDYNHMYDINQRANYPWRR 437
BLAST of jgi.p|Trimin1|348665 vs. uniprot
Match: A0A836CF83_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF83_9STRA) HSP 1 Score: 490 bits (1262), Expect = 1.580e-168 Identity = 252/388 (64.95%), Postives = 286/388 (73.71%), Query Frame = 1
Query: 1 MCPNNHDHPWDNMIREGIHMHPLVDLIHSDRHKEADYIIHIADREEQMREEEGGRVCPGPFPKKTLVMDETDRP-YLAIDESWQKDVEIADV--SYLRTKYLALFKRSFVEKDTSEPVKQLLGFRVPASTRPSQFPIQYPILQKFLREGSFPQWEQRKLDISTLLRDEFYEQDQPEGTVKTGARSIAQQWMQKYVDEHNITRYHRGTNDGDRGEADRGYFEVLWETKILVTCNPSFWEGDHRTGEALAAGAMVLVDIIXXXXXXXXXXXXXXXMWAPRQFPLISGWHAILYDASDEEDFMDKLHYYHTHDDEARKVAARGLYHAQRYFNTATFVDYVLITAEELTGRAAKHEYVRTGLQ--------VLKDFNHMYDIQQRSIYPWRR 1131
MCPN +DHPWDNM EADYII+I +RE MRE E GR CPGPFP KT+++DETD P +LA WQ D E + +Y YLA FKRSFV KDTSE VKQ+LGF + S RPS FPIQYPILQKFLREGSFPQW +R L +STLLR++FYE EG K GAR++AQQ MQKYVDEHN+T Y+ GTNDG+RGEAD+GYFEVLWETKILVTCNPSFWEGDHRTGEALAAGAM LVDI MW PRQFPLISGWHA+LYD SDE DFM+KL YY THDDEARKVAARGLYHAQRYFNT T+VDY++ITAE L GRA + YVRTGL+ V+KD+NH+YD+QQR+IYPWR+
Sbjct: 67 MCPNGYDHPWDNM--------------------EADYIIYIPERENWMRENEEGRECPGPFPNKTIILDETDTPGHLAKGVEWQHDGEDSSPWNNYRTIDYLAAFKRSFVYKDTSEYVKQMLGFSITPSPRPSLFPIQYPILQKFLREGSFPQWHERTLAVSTLLRNDFYED---EGR-KIGARTVAQQRMQKYVDEHNVTNYYHGTNDGNRGEADKGYFEVLWETKILVTCNPSFWEGDHRTGEALAAGAMTLVDI----------------MWGPRQFPLISGWHAVLYDTSDERDFMNKLDYYRTHDDEARKVAARGLYHAQRYFNTVTWVDYMVITAEVLMGRADRDAYVRTGLEEVVSDIEAVVKDYNHLYDLQQRAIYPWRQ 414
BLAST of jgi.p|Trimin1|348665 vs. uniprot
Match: A0A7S3JU57_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JU57_9STRA) HSP 1 Score: 139 bits (349), Expect = 6.810e-32 Identity = 107/365 (29.32%), Postives = 166/365 (45.48%), Query Frame = 1
Query: 28 WDNMIREGIHMHPLVDLIHSDRHKEADYIIHIADREEQMREEEGGRVCPGPFPKKTLVMDETDRPYLAIDESWQKDVEIADVSYLRTKYLALFKRSFVEKDTSEPVKQLLGFRVPASTRPSQFPIQYPILQKFLREGSFPQWEQRKLDISTLLRDEFYEQDQPEGTVKTGARSIAQQWMQKYVDEHNITRYHR---GTNDGDRGEADRGYFEVLWETKILVTCNPSFWEGDHRTGEALAAGAMVLVDIIXXXXXXXXXXXXXXXMWAPRQFPLISGWHAILYDASDEEDFMDKLHYYHTHDDEARKVAARGLYHAQRYFNTATFVDYVLITAEELTGRAAKHE----YVRTGLQVLKDFNHMYDI 1101
+ ++IR+G + HP ++ + + EA++I+++ +++ KK +V+DE+D A+ + + YL KRSFV K Q G+ + FP+ Y + ++ +F QRKLDI R K RS W+ ++D++ +YH N R E ++ YF+ + TKILVT NPSFWEGD R EA+A+GA+V VD M+ P P I G H I+YD SD++ F + L YY H EAR +A GL HA RY + +D++L +A ++ R+ H Y T Q+ D N +
Sbjct: 184 FQHLIRQGFNKHPAIEAVST--MDEAEFILYLPVSTAIPPKQQN-------LTKKLIVLDESDGSG-------------ANRNIAESTYLIYLKRSFVTKKDGLYTGQGRGYER------NYFPMAYSVSDEYFDPQNFLSGSQRKLDIVCSNRP----------FDKQPTRSRIVYWVADFLDKY--PQYHGIAGEVNAAGRREINQKYFDAMRSTKILVTANPSFWEGDFRFFEAVASGALVFVD----------------EMYIPHPHPFIHGKHLIVYDNSDQQTFQNSLKYYLEHPQEARAIARAGLRHALRYHRALSRMDWILRSASDILQRSQLHHKHIVYTHTARQIAYDVNSTTQV 492
BLAST of jgi.p|Trimin1|348665 vs. uniprot
Match: F0Y0E2_AURAN (Thioesterase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0E2_AURAN) HSP 1 Score: 134 bits (337), Expect = 8.780e-30 Identity = 113/362 (31.22%), Postives = 159/362 (43.92%), Query Frame = 1
Query: 28 WDNMIREGIHMHPLVDLIHSDRHKEADYIIHIADREEQMREEEGGRVC---PGPF---PKKTLVMDETDRP--YLAIDESWQKDVEIADVSYLRTKYLALFKRSFVEKDTSEPVKQLLGFRVPASTRPSQFPIQYPILQKFLREGSFPQWEQRKLDISTLLRDEFYEQDQPEGTVKTGARSIAQQWMQKYVDEHNITRYHRG-TNDGDRGEADRGYFEVLWETKILVTCNPSFWEGDHRTGEALAAGAMVLVDIIXXXXXXXXXXXXXXXMWAPRQFPLISGWHAILYDASDEEDFMDKLHYYHTHDDEARKVAARGLYHAQRYFNTATFVDYVLITAEELTGRAA--KHEYVRTGLQVLKD 1080
+ ++I G HP V + SD +EAD+++++ VC P P P K +V+DE D Y + E YL KRSFV K S+ V G R +P+ Y + + + R +D+ R T K RS W+ Y++ H R G N G R E + GYF + ++KI+VTCNPS WEGD RT EALA+GA++ VD M+ P P + G H ++YD SDE+ F +KL YY DEA K+AA GL HA +Y + +D+VL +A E+ A H Y T + D
Sbjct: 186 FHHLIENGFARHPAVVPVASD--EEADFVLYLP-------------VCTPTPPPVANGPNKLVVLDEGDGAGFYPRVGEH---------------DYLIYLKRSFVTK--SDGVYTGTGRRY----NRHYYPMAYSVADSYFHAELMGKVA-RTIDVLCSNRP----------TSKQPTRSRVVSWIHTYLEAHPDVRGIAGDVNSGGRREINDGYFGAMRKSKIVVTCNPSHWEGDFRTFEALASGALIFVD----------------EMYVPHPRPFVDGEHVVVYDNSDEKAFAEKLAYYLARPDEAAKIAAAGLKHALKYHRAVSRMDWVLRSAHEIKSYADADSHPYTHTARAIKHD 484
BLAST of jgi.p|Trimin1|348665 vs. uniprot
Match: A0A7S2GDI6_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GDI6_9STRA) HSP 1 Score: 131 bits (329), Expect = 2.790e-29 Identity = 103/373 (27.61%), Postives = 169/373 (45.31%), Query Frame = 1
Query: 28 WDNMIREGIHMHPLVDLIHSDRHKEADYIIHIADREEQMREEEGGRVCPGPFPKKTLVMDETDRPYLAIDESWQKDVEIADVSYLRTKYLALFKRSFVEKDTSEPVKQLLGFRVPASTRPSQ--FPIQYPILQKFLREGSFPQWEQRKLDISTLLRDEFYEQDQPEGTVKTGARSIAQQWMQKYVDEHNITRYHRG-TNDGDRGEADRGYFEVLWETKILVTCNPSFWEGDHRTGEALAAGAMVLVDIIXXXXXXXXXXXXXXXMWAPRQFPLISGWHAILYDASDEEDFMDKLHYYHTHDDEARKVAARGLYHAQRYFNTATFVDYVL--ITAEELTGRAAKHEYVRTGLQVLKDFNHMYDIQQRSIYPWRR 1131
+ ++I +GI HP + + EAD ++ + P P M R ++ +DE + V+ Y+A FKRS+V+K ++ P RP++ +P+ Y K+ +G F + R ++ LR +++ QP R W+++ V + + G N G R E ++GYF+ + E +I+VTCNPS WEGD R EA+ +GA++ VD MW P+ + + H ILYD D++ F +KL YY +H +EAR++A RG HA RY + +DY L + +EL + Y T L + D + ++ + Y W R
Sbjct: 229 FHHLIEQGISQHPFITT--TKNIMEADVVLWM----------------PTSTPNPPQTMKNGSR-FIVLDEGDGQ----GQVTKAMPNYVAYFKRSWVDKRDG-------NYKGPPRRRPAEKYWPMVYSSSDKY-HQGHFEALDDRTREVVCSLR--CFDR-QP-------TRCRVLNWVKQAVTDLELKNSVTGEVNHGGRKEINKGYFQAMREARIVVTCNPSHWEGDFRFWEAMMSGALIFVD----------------EMWVPQPYAIRHKEHVILYDTKDQDAFREKLKYYLSHPEEAREIARRGYLHALRYHRAVSRLDYFLRSVHEQELLAEGKESPYSETALAIKSDPSRALMVRPKP-YNWAR 543
BLAST of jgi.p|Trimin1|348665 vs. uniprot
Match: A0A8J2SP70_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SP70_9STRA) HSP 1 Score: 129 bits (323), Expect = 2.480e-28 Identity = 92/272 (33.82%), Postives = 129/272 (47.43%), Query Frame = 1
Query: 292 YLALFKRSFVEKDTSEPVKQLLGFRVPASTRPSQFPIQYPILQKFLREGSFPQWEQRKLDISTLLRDEFYEQDQPEGTVKTGARSIAQQWMQKYVDEHNITRYHRG-TNDGDRGEADRGYFEVLWETKILVTCNPSFWEGDHRTGEALAAGAMVLVDIIXXXXXXXXXXXXXXXMWAPRQFPLISGWHAILYDASDEEDFMDKLHYYHTHDDEARKVAARGLYHAQRYFNTATFVDYVLITAEELTGRAAKHEYVRTGLQVLKDFNHMYDIQ 1104
YLA FKRS+V K G R + +P+ Y I + + + R +DI R P T +R ++ W+ Y+++H + G N G R E + YF + KI+VTCNPS WEGD RT EALA+GA+V VD M+ P P + G H ++YD SD + F KL YY +H EA+K+AA GL HA RY + +D+VL +A EL RA + Y T Q+ D ++
Sbjct: 305 YLAYFKRSWVSKRDGAYTGH--GRRY----QRHYYPLAYSIADSYFDAANMGKMA-RTIDILCSNR--------PHERQPTRSRIVS--WIHDYLEKHADVKGIAGDVNSGGRREINEVYFNSMRRAKIVVTCNPSHWEGDFRTFEALASGALVFVD----------------EMYTPHPRPFVDGEHVVVYDNSDPDAFFQKLDYYLSHPQEAQKLAAAGLRHALRYHRAVSRLDFVLRSAHEL--RAEESSYTYTAQQIKDDVKATTQVE 541
BLAST of jgi.p|Trimin1|348665 vs. uniprot
Match: A0A7S3JV67_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JV67_9STRA) HSP 1 Score: 121 bits (304), Expect = 6.500e-26 Identity = 96/306 (31.37%), Postives = 137/306 (44.77%), Query Frame = 1
Query: 196 LVMDETDRPYLAIDESWQKDVEIADVSYLRTKYLALFKRSFVEKDTSEPVKQLLGFRVPASTRPSQFPIQYPILQKFLREGSFPQWEQRKLDISTLLRDEFYEQDQPEGTVKTGARSIAQQWMQKYVDEHNITRYHR---GTNDGDRGEADRGYFEVLWETKILVTCNPSFWEGDHRTGEALAAGAMVLVDIIXXXXXXXXXXXXXXXMWAPRQFPLISGWHAILYDASDEEDFMDKLHYYHTHDDEARKVAARGLYHAQRYFNTATFVDYVLITAEELTGRAAKHEYVRTGLQVLKDFNHMYDIQ 1104
+V+DE D PY +V+I++ T YL KRS+V K + V +G R + FP+ Y + K+ QRKLDI R P T AR + W+ ++D H +YH N R + YF + +KI+VT NPS WEGD R EA+A+GA+V VD M+ P P I H I+YD SD++ F + L YY H +EAR +A GL HA RY + +D++L +A E+ Y T + D N ++
Sbjct: 237 IVLDEADSPYF--------NVKISE-----TSYLIYLKRSWVSK--KDGVYTGIGKRYERN----YFPMAYSVSDKYFDPFRTLSGSQRKLDIVCSNR--------PTERQPTRARIV--HWVGDFLDSHE--KYHGIAGEVNAAGRRGINELYFAAMRSSKIVVTANPSHWEGDFRFFEAVASGALVFVD----------------EMYTPHPHPFIHKRHLIVYDNSDQDTFQNLLKYYLEHPEEARIIARAGLRHALRYHRAVSRMDWILRSAHEIATPQGVTAYTHTARSIAYDVNATTQVK 495
BLAST of jgi.p|Trimin1|348665 vs. uniprot
Match: F0Y4V3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4V3_AURAN) HSP 1 Score: 120 bits (302), Expect = 3.230e-25 Identity = 83/265 (31.32%), Postives = 121/265 (45.66%), Query Frame = 1
Query: 292 YLALFKRSFVEKDTSEPVKQLLGFRVPASTRPSQFPIQYPILQKFLREGSFPQWE-QRKLDISTLLRDEFYEQDQPEGTVKTGARSIAQQWMQKYVDEHNITRYHRGT-NDGDRGEADRGYFEVLWETKILVTCNPSFWEGDHRTGEALAAGAMVLVDIIXXXXXXXXXXXXXXXMWAPRQFPLISGWHAILYDASDEEDFMDKLHYYHTHDDEARKVAARGLYHAQRYFNTATFVDYVLITAEE--LTGRAAKHEYVRTGLQVL 1074
YLA FKRS+V+KD + G R S S FP+ Y + +++ +R +D+ LRD G R W+++Y + Y G + R D GY + + K++VTCNP+ WEGD R EAL++GA+V+VD M P PLI G H + YD +++ D ++KL + ARKV +G H R+ ++VDY L TA L R +YV TG +L
Sbjct: 1247 YLAYFKRSWVQKDGKASPVRAAGQRHKKSK--SYFPMPYSLADEYVDSAKLGDVVGERPIDVVCTLRD------------TRGGRGRVLPWLREYAKAKQLENYRLGQLSSAGRTVIDAGYLSTMRQAKVVVTCNPTGWEGDFRLFEALSSGALVMVD----------------RMGTPYHHPLIDGEHVVFYDHTNKTDLLEKLDHALKRPHWARKVGVKGYAHVLRHHRAVSWVDYFLRTAHAKMLAERGVVADYVETGQAIL 1481
BLAST of jgi.p|Trimin1|348665 vs. uniprot
Match: A0A8J2SCI7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCI7_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.590e-24 Identity = 85/270 (31.48%), Postives = 123/270 (45.56%), Query Frame = 1
Query: 289 KYLALFKRSFVEKDTSEPVKQLLGFRVPASTRPSQFPIQYPILQKFLREGSFPQWE-QRKLDISTLLRDEFYEQDQPEGTVKTGARSIAQQWMQKYVDEHNITRYHRGT-NDGDRGEADRGYFEVLWETKILVTCNPSFWEGDHRTGEALAAGAMVLVDIIXXXXXXXXXXXXXXXMWAPRQFPLISGWHAILYDASDEEDFMDKLHYYHTHDDEARKVAARGLYHAQRYFNTATFVDYVLITAEE--LTGRAAKHEYVRTGLQVLKDFN 1086
+YLA FKRS+V+K + P+K G R S S FP+ Y + +++ R +D+ LRD K G R W+++Y E + G + R D GY + K++VTCNP+ WEGD R EAL++GA+V+VD M P PLI G H + YD +++ D +DKL + ARKV +G H R+ ++ DY L TA L + + +Y TG VL N
Sbjct: 337 QYLAYFKRSWVDKRDAVPMKAS-GSR--HSRSKSYFPMPYALADEYVDSDKLGDVVGARPIDVVCTLRD------------KRGGRGRVLPWLKEYAAERKLHDVRLGQLSSAGRTVIDAGYLSTMRRAKVVVTCNPTGWEGDFRLFEALSSGALVMVD----------------RMGTPYHHPLIDGEHVVYYDHTNKTDLLDKLTHALNRPHWARKVGVKGYAHVLRHHRAVSWADYFLRTAHARMLAEKGEEQKYAETGQAVLARAN 575
BLAST of jgi.p|Trimin1|348665 vs. uniprot
Match: A0A835Z3B6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3B6_9STRA) HSP 1 Score: 206 bits (525), Expect = 2.410e-65 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 3
Query: 78 MASEAMQCEGFETEPEPRASDVPSEDARSPEQPEAEEDMPLLFMDGLPRNYLNSAAIASLASLIDSDSDSESGXXXXXXXXDAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXQQGRAPYARPASDDAPSRSSGSARHASAGEAQILLSLWKM 533
MASEAMQCEGFETEPEPRASDVPSEDARSPEQPEAEEDMPLLFMDGLPRNYLNSAAIASLASLIDSDSDSESGXXXXXXXXDAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXQQGRAPYARPASDDAPSRSSGSARHASAGEAQILLSLWKM
Sbjct: 1 MASEAMQCEGFETEPEPRASDVPSEDARSPEQPEAEEDMPLLFMDGLPRNYLNSAAIASLASLIDSDSDSESGXXXXXXXXDAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXQQGRAPYARPASDDAPSRSSGSARHASAGEAQILLSLWKM 152 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348665 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
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BLAST of jgi.p|Trimin1|348665 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9620 ID=mRNA_9620|Name=jgi.p|Trimin1|348665|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1474bp|location=Sequence derived from alignment at Contig_29:1016516..1022321+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTGCCCGAACAACCACGATCACCCGTGGGACAACATGATCAGGGAGGGback to top protein sequence of jgi.p|Trimin1|348665 >Trimin1|348665|estExt_Genemark1.C_Ctg_290121 ID=Trimin1|348665|estExt_Genemark1.C_Ctg_290121|Name=jgi.p|Trimin1|348665|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=378bp MCPNNHDHPWDNMIREGIHMHPLVDLIHSDRHKEADYIIHIADREEQMREback to top mRNA from alignment at Contig_29:1016516..1022321+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9620 ID=mRNA_9620|Name=jgi.p|Trimin1|348665|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5806bp|location=Sequence derived from alignment at Contig_29:1016516..1022321+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_29:1016516..1022321+ >mRNA_9620 ID=mRNA_9620|Name=jgi.p|Trimin1|348665|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1134bp|location=Sequence derived from alignment at Contig_29:1016516..1022321+ (Tribonema minus UTEX_B_3156 )back to top |