mRNA_9590 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|164053 vs. uniprot
Match: A0A835YXV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXV8_9STRA) HSP 1 Score: 585 bits (1509), Expect = 4.830e-212 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1 Query: 1 MVHDYSAGILALCAVMRDQRADIREWVDYHYLYGVDKFYIFDDDSKDPALDILQDYISNGVVHYIEHAKEFLGVEHPLQPGFDYCIKEWGPLHKWMGFIDIDEFILRPGISIPDVLERYAASAAVALNWKVFGSSGFEMRPGGVAHYTKCTPPEAYPSYFVKCIVQPRHTIRSLCVGHEFEYHPGGRVAVNVEGNSTTLKRSWSIPPAYSYLYINHYQVKSKQEFFEMKIPRGTGDGNSGPNEEYFQHIEAAATADCMPLQWPRPRTVGGG 813 MVHDYSAGILALCAVMRDQRADIREWVDYHYLYGVDKFYIFDDDSKDPALDILQDYISNGVVHYIEHAKEFLGVEHPLQPGFDYCIKEWGPLHKWMGFIDIDEFILRPGISIPDVLERYAASAAVALNWKVFGSSGFEMRPGGVAHYTKCTPPEAYPSYFVKCIVQPRHTIRSLCVGHEFEYHPGGRVAVNVEGNSTTLKRSWSIPPAYSYLYINHYQVKSKQEFFEMKIPRGTGDGNSGPNEEYFQHIEAAATADCMPLQWPRPRTVGGG Sbjct: 1 MVHDYSAGILALCAVMRDQRADIREWVDYHYLYGVDKFYIFDDDSKDPALDILQDYISNGVVHYIEHAKEFLGVEHPLQPGFDYCIKEWGPLHKWMGFIDIDEFILRPGISIPDVLERYAASAAVALNWKVFGSSGFEMRPGGVAHYTKCTPPEAYPSYFVKCIVQPRHTIRSLCVGHEFEYHPGGRVAVNVEGNSTTLKRSWSIPPAYSYLYINHYQVKSKQEFFEMKIPRGTGDGNSGPNEEYFQHIEAAATADCMPLQWPRPRTVGGG 271
BLAST of jgi.p|Trimin1|164053 vs. uniprot
Match: A0A059LLJ4_9CHLO (Glycosyltransferase family 92 protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LLJ4_9CHLO) HSP 1 Score: 145 bits (367), Expect = 1.070e-37 Identity = 85/257 (33.07%), Postives = 135/257 (52.53%), Query Frame = 1 Query: 19 AGILALCAVMRDQRADIREWVDYHYLYGVDKFYIFDDDSKDPALDILQDYISNGVVHYIEHAK--EFLGVEHPLQPGFDYCIKEWGPLHKWMGFIDIDEFILRPGIS--IPDVLERYAASAAVALNWKVFGSSGFEMRP--GGVAHYTKCTPPEAYPSYFVKCIVQPRHTIRSLCVGHEFEYHPGGRVAVNVEGNSTTLKRSWSIPPAYSYLYINHYQVKSKQEFFEMKIPRGTGDGNSGPNEEYFQHIEAAATADC 771 A + +C+ ++DQ AD+REW+ YH GV++FY+ D S P +L D+I +G+VHY A G P ++ C++ H WM FID+DEF++ + P +L + + A+ LNW VFGSSG E +P +A Y +C P + VK +V+P + H F+Y VA + G T+ S A + + ++HY +KS++EF K+ RG+G GN +F +++ TA+C Sbjct: 108 AAFVTICSAVKDQHADVREWIVYHRAIGVERFYLHDTGSVPPMDTVLPDFIESGLVHYRYDAATPHRAGTHGPQITVYERCLESGRVAHPWMAFIDVDEFVVLRDATPDFPTLLREFEDAGALVLNWVVFGSSGLEKKPRTNTLASYWQCAPDGHPENLHVKSVVRPARVNDTRTDPHHFKYR-APYVAKSAGGE--TVAGPKSSRQATARVALHHYAIKSREEF-GAKMARGSGMGNQ-KTMAFFHYVDNYTTANC 359
BLAST of jgi.p|Trimin1|164053 vs. uniprot
Match: A0A8J9RE21_9CHLO (Probable glycosyltransferase family 92 protein RCOM_0530710 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RE21_9CHLO) HSP 1 Score: 143 bits (360), Expect = 8.330e-37 Identity = 90/258 (34.88%), Postives = 138/258 (53.49%), Query Frame = 1 Query: 28 LALCAVMRDQRADIREWVDYHYLYGVDKFYIFDDDSKDPALDILQDYISNGVVHYIEHAKEFLGVEHPLQP----GFDYCIKEWGPLHKWMGFIDIDEFILRPGISI---PDVLERYAASAAVALNWKVFGSSGFEMRPGG--VAHYTKCTPPEAYPSYFVKCIVQPRHTIRSLCVGHEFEYHPGGRVAVNVEGNSTTLKRSWSIPPAYSYLYINHYQVKSKQEFFEMKIPRGTGDGNSGPNEEYFQHIEAAATADCM 774 LA+C V++DQ D+REWVDYH GV+K YIFDD+S P+L +++D + GVV Y E + F EHP +D CI+ + LH+WM FID+DE+ + ++ PD+L+ Y A+ +NW++FGSSG+ RP G + Y C + +K I + H F Y G + AVN ++ ++ L ++HY KS +++ KI RG+ GN + E+F +++ AT CM Sbjct: 110 LAMCLVVKDQGDDLREWVDYHRSIGVEKLYIFDDNSTIPSLVVVEDLVDAGVVEY-EAVESF---EHPSGKVQLWAYDTCIQRYRGLHQWMAFIDVDEYFIITDSNVTVLPDLLKDYMDYGALVVNWQMFGSSGYANRPPGGTLESYVDCFEVNHLENKHIKTIANLDFVECTDRDPHHFLYMDG-KHAVNTAYQVVEGAKADNV--VTDRLLLHHYVTKSLEQYIS-KIARGSAMGNR-KSIEFFDFVQSQATEKCM 358
BLAST of jgi.p|Trimin1|164053 vs. uniprot
Match: E1Z8A0_CHLVA (Glycosyltransferase family 92 protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z8A0_CHLVA) HSP 1 Score: 140 bits (354), Expect = 3.730e-36 Identity = 83/266 (31.20%), Postives = 132/266 (49.62%), Query Frame = 1 Query: 22 GILALCAVMRDQRADIREWVDYHYLYGVDKFYIFDDDSKDPALDILQDYISNGVVHY--IEHAKEFLG-----------VEHPLQPGFDYCIKEWGPLHKWMGFIDIDEFILRPGIS--IPDVLERYAASAAVALNWKVFGSSGFEMRPGGVAH-YTKCTPPEAYPSYFVKCIVQPRHTIRSLCVGHEFEYHPGGRVAVNVEGNSTTLKRSWSIPPAYSYLYINHYQVKSKQEFFEMKIPRGTGDGNSGPNEEYFQHIEAAATADC 771 G LA+C +R+Q A++ EW+DYH GV Y+ DD S+ P +L YI G+V + ++ E + H G+ YC+ ++G H+WM +IDIDEF + + +P +L Y +A+NW++FGSSG + + G YTKC P + +K I ++ R G ++P G VN S YS L ++HY +KS+++F E K+ RG G+ G +++ IEA + +C Sbjct: 60 GYLAICTTVRNQHAELPEWLDYHRRLGVSHVYVMDDASQPPLEGVLAPYIEEGLVTHRMLKRVPEMQAEIREATCHEPYITHKQLMGYAYCLMDYGVRHQWMAYIDIDEFFVFYDSTPDLPTLLHEYEGYGGLAVNWRMFGSSGHKKKQGNTLRAYTKCFAPNNGENTQIKTIANMQYLARMA--GPHDAFYPPGHFTVNPSREPVVGPLSNGAD--YSRLALHHYAIKSREDF-EEKMARGDVMGDRGKLHDFWDRIEAGSVDNC 320
BLAST of jgi.p|Trimin1|164053 vs. uniprot
Match: A0A2V0P786_9CHLO (Glycosyltransferase family 92 protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P786_9CHLO) HSP 1 Score: 139 bits (349), Expect = 1.770e-35 Identity = 96/275 (34.91%), Postives = 139/275 (50.55%), Query Frame = 1 Query: 16 SAGILALCAVMRDQRADIREWVDYHYLYGVDKFYIFDDDSKDPALDILQDYISNGVVHYIEHAKEFLGV---EHPLQPGFDYCIKEWGPLHKWMGFIDIDEFI-LRPGISIPDVLERYAASAAVALNWKVFGSSGFEMRPGG--VAHYTKCTPPEAYPSYFVKCIVQPRHTIRSLCVGHEFEYHPGGRVAVNVEGNSTTLKRSWSIPPAYSYLYINHYQVKSKQEFFEMKIPRGTGDGNSGP-----NEEYFQHIEAAATADCMPLQWPRPRTVG 807 ++ +ALC ++D+ +DIREWV YH++ GVDKFYIFDD S P +L D I++G+V Y G + ++YC+ ++G HK+MGFID DEF+ L ++P +L Y +A+ FGSSG RP G +A YTKC P P +VK VQP R + V H Y GG AV+V G + PA I+HY +S +++ + + RGT +G GP N + ++ +PL R G Sbjct: 50 NSSYVALCLHVKDEHSDIREWVLYHHMIGVDKFYIFDDYSSPPMSVVLHDLIASGLVDYTFEMGPLPGRLVGTNKQDQAYNYCLHQYGSRHKFMGFIDADEFVVLARDATLPALLRDYEQYRGLAMFSIGFGSSGHISRPAGGVLASYTKCAPKT--PGGYVKSFVQPSKVDRIVDV-HTAVYRDGGH-AVDVWGREYKGPFEHTDRPADERAIIHHYHARSAEDW-QRRARRGT-NGVGGPPHPIKNFLFINNMSNQTCGAALPLAARLAREFG 318
BLAST of jgi.p|Trimin1|164053 vs. uniprot
Match: A0A2V0PM01_9CHLO (Glycosyltransferase family 92 protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PM01_9CHLO) HSP 1 Score: 140 bits (353), Expect = 6.610e-35 Identity = 89/265 (33.58%), Postives = 135/265 (50.94%), Query Frame = 1 Query: 10 DYSAGILALCAVMRDQR-ADIREWVDYHYLYGVDKFYIFDDDSKDPALDILQDYISNGVVHYI----EHAKEFLGVEHPLQPGFDYCIKEWGPLHKWMGFIDIDEFILRPGISIPDVLERYAAS----AAVALNWKVFGSSGFEMRP-GGV-AHYTKCTPPEAYPSYFVKCIVQPRHTIRSLCVGHEFEYHPGGRVAVNVEGNSTTLKRSWSIPPAYSYLYINHYQVKSKQEFFEMKIPRGTGDGNSGPNEEYFQHIEAAATADC 771 D+ G A+C+V+++Q AD+REW++YH G K YI+D++S +P D ++DY+ +G+V Y H L ++ C + H+W+ FID DEFI+ S D +E + +A+NW +FGSSG +RP GGV +Y C P + + VK I RH + + H Y + VN G +K + P++ + + HY KS+ EF E K+ RG+ GN N +FQ IE A A C Sbjct: 155 DWPDGYFAVCSVIKNQNGADLREWIEYHRYIGTRKIYIYDNNSTEPLADHIRDYLHSGLVEYTYFVGRHRYRDLFRTTSQWWAYNDCATRFATRHRWLAFIDGDEFIMLRNESRTDNIEEFLTDYDQYGGLAVNWMIFGSSGHLVRPHGGVLVNYRACLPSDQVENTHVKIIANTRHLLTAGDDPHSVFYRTRDKHTVNEMG--ARVKGPKTEAPSHRKIALYHYLTKSRGEF-EAKVRRGSAAGNF-KNMGFFQAIEDLANATC 415
BLAST of jgi.p|Trimin1|164053 vs. uniprot
Match: A0A2P6U0V8_CHLSO (Glycosyltransferase family 92 protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U0V8_CHLSO) HSP 1 Score: 137 bits (346), Expect = 5.990e-34 Identity = 91/269 (33.83%), Postives = 131/269 (48.70%), Query Frame = 1 Query: 16 SAGILALCAVMRDQRADIREWVDYHYLYGVDKFYIFDDDSKDPALDILQDYISNGVVHYIEHAKEFLGV--------EHPLQPGF------DYCIKEWGPLHKWMGFIDIDEF-ILRPGI-SIPDVLERYAASAAVALNWKVFGSSGFEMRPGG-VAHYTKCTPPEAYPSYFVKCIVQPRHTIRSLCVGHEFEYHPGGRVAVNVEGNSTTLKRSWSIPPAYSYLYINHYQVKSKQEFFEMKIPRGTGDGNSGPNEEYFQHIEAAATADC 771 S GI A ++ Q D+ EW+ YH GVD FY++D SK P +LQ +I G+V YI + +F +H +P F C++++G H+WM FID DEF +L G S+P +L Y A + LNW++ GSSG + R + YT C + K I+ P T++ + F Y GG AV +G S + A L I HY KS QE F+ K+ RG G G ++YF +++ AT C Sbjct: 180 SKGI-AFALAVKGQHEDLAEWLQYHSQLGVDHFYVYDTGSKPPLDTVLQPFIEEGLVTYI-YLDDFAAAAKRLTASNDHRYRPKFKQWIVYSMCLRDYGARHRWMAFIDSDEFLVLTDGTPSLPALLADYEDRAGLVLNWRILGSSGHKQRQNSTLLAYTSCYQRDVDEQLATKSIINPALTVQPPSPHNAFYY--GGCHAVQTDGTRVDTFASDRV--ADERLIIYHYITKS-QEDFDRKMARGDGMGRRDRKQDYFDNVQQKATEQC 441
BLAST of jgi.p|Trimin1|164053 vs. uniprot
Match: A0A087SHE7_AUXPR (Glycosyltransferase family 92 protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SHE7_AUXPR) HSP 1 Score: 133 bits (334), Expect = 8.590e-34 Identity = 80/260 (30.77%), Postives = 131/260 (50.38%), Query Frame = 1 Query: 13 YSAGILALCAVMRDQRADIREWVDYHYLYGVDKFYIFDDDSKDPALDILQDYISNGVVHYIEHAKEFLGVEHPLQPG-FDYCIKEWGPLHKWMGFIDIDEFILRPGIS----IPDVLERYAASAAVALNWKVFGSSGFEMRPGG--VAHYTKCTPPEAYPSYFVKCIVQPRHTIRSLCVGHEFEYHPGGRVAVNVEGNSTTLKRSWSIPPAYSYLYINHYQVKSKQEFFEMKIPRGTGDGNSGPNEEYFQHIEAAATADC 771 +S +A+CA +D D+REW DYH GV + Y+FD D+ +P + D+I+ G V Y +L P+ +D C++ PLH ++ FID+DEF++ +P +L+ + A+A+NW++ G G ++PGG + ++ CTP + + +K IV + + H FEY G AV + G T S ++ LY HY KS ++ K+ +G+G GN E+ I+ A+T C Sbjct: 7 HSTEYVAICAATKDAGPDVREWADYHLRLGVARIYLFDTDNPEPVEPDIADFINQGRVEYY-----YLPRVTPITIKLYDLCLRHASPLHAFIAFIDVDEFLVMASAERARGLPGLLKEFEQHGALAVNWRLLGPGGHAIQPGGGVLQNFLACTPVQYPENRHIKSIVNTKFVRGTSSDPHHFEYAAGAS-AVTLAGEQVTEAMSATVSGDRMMLY--HYATKSMSQY-SGKMVKGSGMGNR-KGAEFLTRIDGASTEIC 256
BLAST of jgi.p|Trimin1|164053 vs. uniprot
Match: A0A7J7PLB3_9CHLO (Glycosyltransferase family 92 protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PLB3_9CHLO) HSP 1 Score: 132 bits (332), Expect = 6.300e-33 Identity = 85/264 (32.20%), Postives = 133/264 (50.38%), Query Frame = 1 Query: 13 YSAGILALCAVMRDQRADIREWVDYHYLYGVDKFYIFDDDSKDPALDILQDYISNGVVHY--IEHAKEFLGVEHPLQPGFDY--CIKEWGPLHKWMGFIDIDEFILRPGIS----IPDVLERYAASAAVALNWKVFGSSGFEMRP-GGV-AHYTKCTPPEAYPSYFVKCIVQPRHTIRSLCVGHEFEYHPGGRVA-VNVEGNSTTLKRSWSIPPAYSYLYINHYQVKSKQEFFEMKIPRGTGDGNSGPNEEYFQHIEAAATADC 771 Y G +A+CA++++Q D+REW++YH GV K Y++D++S P L + D + +G V Y + + + Y C+ + H+W+ F+D DEFI+ G + I D + Y +ALNW VFGSSG + RP GGV +Y +C P + + VK I H + H Y+ R VN G +S PP+++ + + HY KS+ E+ + K+ RG+ GN + E+F I AT C Sbjct: 40 YPDGFVAICAIVKNQHQDLREWLEYHKWLGVSKVYVYDNNSTVPLLPDIIDMVQSGYVEYSYFTGTPRYRDLFRTSSQWWAYNDCVTRFKHRHRWLAFVDADEFIVLQGAAGADNINDFMRGYDQYGGLALNWVVFGSSGHKQRPQGGVLVNYRQCLPLQQEQNQHVKVIANTAHLMTIGDNPHRVYYNDMKRFGTVNELGAPVPGPKS---PPSHTKVALYHYLTKSEDEYMQ-KMRRGSAAGNY-KSPEFFTAINGLATERC 298
BLAST of jgi.p|Trimin1|164053 vs. uniprot
Match: A0A1D1ZPM3_AUXPR (Glycosyltransferase family 92 protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZPM3_AUXPR) HSP 1 Score: 132 bits (333), Expect = 9.640e-33 Identity = 79/256 (30.86%), Postives = 129/256 (50.39%), Query Frame = 1 Query: 28 LALCAVMRDQRADIREWVDYHYLYGVDKFYIFDDDSKDPALDILQDYISNGVVHYIEHAKEFLGVEHPLQPG--FDYCIKEWGPLHKWMGFIDIDEFILRPGIS----IPDVLERYAASAAVALNWKVFGSSGFEMRPGG--VAHYTKCTPPEAYPSYFVKCIVQPRHTIRSLCVGHEFEYHPGGRVAVNVEGNSTTLKRSWSIPPAYSYLYINHYQVKSKQEFFEMKIPRGTGDGNSGPNEEYFQHIEAAATADC 771 +A+CA +D D+REW DYH GV + Y+FD D+ +P + D+I+ G V Y + + PL +D C++ PLH ++ FID+DEF++ +P +L+ + A+A+NW++ G G ++PGG + ++ CTP + + +K IV + + H FEY G AV + G T S ++ LY HY KS ++ K+ +G+G GN E+ I+ A+T C Sbjct: 107 VAICAATKDAGPDVREWADYHLRLGVARIYLFDTDNPEPVEPDIADFINQGRVEYY-YLPRVTPITVPLMQIKLYDLCLRHASPLHAFIAFIDVDEFLVMASAERARGLPGLLKEFEQHGALAVNWRLLGPGGHAIQPGGGVLQNFLACTPVQYPENRHIKSIVNTKFVRGTSSDPHHFEYAAGAS-AVTLAGEQVTEAMSATVSGDRMMLY--HYATKSMSQY-SGKMVKGSGMGNR-KGAEFLTRIDGASTEIC 356 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164053 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9590 ID=mRNA_9590|Name=jgi.p|Trimin1|164053|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=816bp|location=Sequence derived from alignment at Contig_29:582647..584333- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGTGCACGACTACTCCGCGGGAATCCTGGCCTTGTGTGCTGTCATGCGback to top protein sequence of jgi.p|Trimin1|164053 >Trimin1|164053|e_gw1.29.62.1 ID=Trimin1|164053|e_gw1.29.62.1|Name=jgi.p|Trimin1|164053|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=272bp MVHDYSAGILALCAVMRDQRADIREWVDYHYLYGVDKFYIFDDDSKDPALback to top mRNA from alignment at Contig_29:582647..584333- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9590 ID=mRNA_9590|Name=jgi.p|Trimin1|164053|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1687bp|location=Sequence derived from alignment at Contig_29:582647..584333- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_29:582647..584333- >mRNA_9590 ID=mRNA_9590|Name=jgi.p|Trimin1|164053|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=816bp|location=Sequence derived from alignment at Contig_29:582647..584333- (Tribonema minus UTEX_B_3156 )back to top |