mRNA_9541 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|140345 vs. uniprot
Match: A0A835YYY1_9STRA (S-adenosyl-L-methionine-dependent methyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYY1_9STRA) HSP 1 Score: 333 bits (854), Expect = 8.710e-116 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1 Query: 1 MEMYCGAGGFTHGVKEYLDTALATDFSQSARALYARNHPAARVIQGDANERGVQLALITEATRLGVEVGLGGPPCTHFSQAGKRETHEGWQCVLSMLLVHAAIPSLRMTVLENVLGFMSTPQWQHTLAAARALGFSFSHHVVTGDDCGLPTMRRRVFLVLTRG 489 MEMYCGAGGFTHGVKEYLDTALATDFSQSARALYARNHPAARVIQGDANERGVQLALITEATRLGVEVGLGGPPCTHFSQAGKRETHEGWQCVLSMLLVHAAIPSLRMTVLENVLGFMSTPQWQHTLAAARALGFSFSHHVVTGDDCGLPTMRRRVFLVLTRG Sbjct: 1 MEMYCGAGGFTHGVKEYLDTALATDFSQSARALYARNHPAARVIQGDANERGVQLALITEATRLGVEVGLGGPPCTHFSQAGKRETHEGWQCVLSMLLVHAAIPSLRMTVLENVLGFMSTPQWQHTLAAARALGFSFSHHVVTGDDCGLPTMRRRVFLVLTRG 163
BLAST of jgi.p|Trimin1|140345 vs. uniprot
Match: A0A836CA60_9STRA (S-adenosyl-L-methionine-dependent methyltransferase (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA60_9STRA) HSP 1 Score: 179 bits (454), Expect = 6.930e-55 Identity = 84/159 (52.83%), Postives = 117/159 (73.58%), Query Frame = 1 Query: 1 MEMYCGAGGFTHGVKEYLDTALATDFSQSARALYARNHPAARVIQGDANERGVQLALITEATRLGVEVGLGGPPCTHFSQAGKRETHEGWQCVLSMLLVHAAIPSLRMTVLENVLGFMSTPQWQHTLAAARALGFSFSHHVVTGDDCGLPTMRRRVFLV 477 ME++CGAGG + G K ++ T LA+D ++ A L+A NH V+ + N+R QL +I EA RLGVEV GGPPCT FS +GKR + +G QC++SML V AA+ ++RM +LENV+GF+STP++Q TL A+ LGF SH+V++ +DCGLPT RRRVF++ Sbjct: 3 MELFCGAGGLSEGAKPFVHTVLASDINERACKLFASNHRGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQQTLDLAQGLGFDHSHNVISVNDCGLPTKRRRVFIM 161
BLAST of jgi.p|Trimin1|140345 vs. uniprot
Match: A0A835YGJ9_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGJ9_9STRA) HSP 1 Score: 190 bits (482), Expect = 6.150e-53 Identity = 89/163 (54.60%), Postives = 121/163 (74.23%), Query Frame = 1 Query: 1 MEMYCGAGGFTHGVKEYLDTALATDFSQSARALYARNHPAARVIQGDANERGVQLALITEATRLGVEVGLGGPPCTHFSQAGKRETHEGWQCVLSMLLVHAAIPSLRMTVLENVLGFMSTPQWQHTLAAARALGFSFSHHVVTGDDCGLPTMRRRVFLVLTRG 489 ME++CGAGG + G K ++ T LA+D S+ A L+A NH V+ + N+R QL +I EA RLGVEV GGPPCT FS +GKR + +G QC++SML V AA+ ++RM +LENV+GF+STP++Q TL A+ LGF SH+V++G+DCGLPT RRRVF++ TRG Sbjct: 609 MELFCGAGGLSEGAKPFVHTVLASDISERACKLFASNHCGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGLQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQQTLDLAQGLGFDHSHNVISGNDCGLPTKRRRVFIMFTRG 771
BLAST of jgi.p|Trimin1|140345 vs. uniprot
Match: A0A835Z6Y7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Y7_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.460e-48 Identity = 99/163 (60.74%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 1 MEMYCGAGGFTHGVKEYLDTALATDFSQSARALYARNHPAARVIQGDANERGVQLALITEATRLGVEVGLGGPPCTHFSQAGKRETHEGWQCVLSMLLVHAAIPSLRMTVLENVLGFMSTPQWQHTLAAARALGFSFSHHVVTGDDCGLPTMRRRVFLVLTRG 489 MEMYCGAGGFTHG KEYL+T+LATDFSQSA ALYARNHPAARV+QGDANERGVQLALI EATRLGVE WQHTLAAARALGFSFSHHVV GDDCGLPTM RRVFLV TRG Sbjct: 2331 MEMYCGAGGFTHGAKEYLNTSLATDFSQSACALYARNHPAARVLQGDANERGVQLALIAEATRLGVE-------------------------------------------------------WQHTLAAARALGFSFSHHVVRGDDCGLPTMWRRVFLVFTRG 2438
BLAST of jgi.p|Trimin1|140345 vs. uniprot
Match: A0A835YXD3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXD3_9STRA) HSP 1 Score: 176 bits (445), Expect = 6.880e-48 Identity = 98/163 (60.12%), Postives = 99/163 (60.74%), Query Frame = 1 Query: 1 MEMYCGAGGFTHGVKEYLDTALATDFSQSARALYARNHPAARVIQGDANERGVQLALITEATRLGVEVGLGGPPCTHFSQAGKRETHEGWQCVLSMLLVHAAIPSLRMTVLENVLGFMSTPQWQHTLAAARALGFSFSHHVVTGDDCGLPTMRRRVFLVLTRG 489 MEMYCGAGGFTHG KEYLDTALATDFSQSA A YARNHPAARVIQGDANER VQLALI EATRLGVE WQHTL AAR LGFSFSHHV+ GDDCGLPTMRRRVFLV TRG Sbjct: 2223 MEMYCGAGGFTHGAKEYLDTALATDFSQSACARYARNHPAARVIQGDANERRVQLALIAEATRLGVE-------------------------------------------------------WQHTLGAARTLGFSFSHHVIRGDDCGLPTMRRRVFLVFTRG 2330
BLAST of jgi.p|Trimin1|140345 vs. uniprot
Match: A0A835ZBI0_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBI0_9STRA) HSP 1 Score: 167 bits (424), Expect = 3.930e-45 Identity = 81/156 (51.92%), Postives = 110/156 (70.51%), Query Frame = 1 Query: 22 GGFTHGVKEYLDTALATDFSQSARALYARNHPAARVIQGDANERGVQLALITEATRLGVEVGLGGPPCTHFSQAGKRETHEGWQCVLSMLLVHAAIPSLRMTVLENVLGFMSTPQWQHTLAAARALGFSFSHHVVTGDDCGLPTMRRRVFLVLTRG 489 GG ++ T LA+D S+ A L+A NH V+ + N+R QL +I EA RLGVEV GGPPCT FS +GKR + +G QC++SML V AA+ ++RM +LENV+GF+STP++Q L A+ LGF SH+V++G+DCGLPT RRRVF++ TRG Sbjct: 529 GGSARAQNRFVHTVLASDISERACKLFASNHCGTAVMPANINDRCAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQQALDLAQGLGFDHSHNVISGNDCGLPTKRRRVFIMFTRG 684
BLAST of jgi.p|Trimin1|140345 vs. uniprot
Match: A0A835YZF8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF8_9STRA) HSP 1 Score: 152 bits (383), Expect = 9.790e-40 Identity = 75/148 (50.68%), Postives = 104/148 (70.27%), Query Frame = 1 Query: 1 MEMYCGAGGFTHGVKEYLDTALATDFSQSARALYARNHPAARVIQGDANE--RGVQLALITEATRLGVEVGLGGPPCTHFSQAGKRETHEGWQCVLSMLLVHAAIPSLRMTVLENVLGFMSTPQWQHTLAAARALGFSFSHHVVTGDD 438 ME++CGA G + G K ++DT LA+D + A L+A NH V+ + N+ R QL +I EA RLGVEV GGPPCT FS +GKR + +G QC++S L V AAI ++RM +LENV+GF+STP++Q TL A+ LGF SH+V++G+D Sbjct: 30 MELFCGAEGLSEGAKPFVDTVLASDICERACKLFASNHCGTTVMPANINDGHRSAQLHIIAEACRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISKLQVSAAISTVRMVLLENVVGFLSTPEFQQTLDLAQGLGFDHSHNVISGND 177
BLAST of jgi.p|Trimin1|140345 vs. uniprot
Match: R4TMW4_9CAUD (Cytosine-specific methyltransferase n=1 Tax=Halovirus HGTV-1 TaxID=1273749 RepID=R4TMW4_9CAUD) HSP 1 Score: 75.1 bits (183), Expect = 4.860e-13 Identity = 53/173 (30.64%), Postives = 82/173 (47.40%), Query Frame = 1 Query: 1 MEMYCGAGGFTHGVKEYLDTALA-TDFSQSARALYARNHPAARVIQGDANERGVQLALITEATRLGVEVGLGGPPCTHFSQAGKRETHEGWQCVLSMLLVHAAIPSLRMTVLENVLGFMS---------TPQWQHTLAAARALGFSFSHHVVTGDDCGLPTMRRRVFLVLTRG 489 ++++CGAGG +HG ++ LA D A Y NHP+ + +L L E V+V +GGPPC FS AG+R++ + +++ L + V+ENV+G +S P + H R++GF H + + G+ RRRVF V TRG Sbjct: 12 LDLFCGAGGLSHGFEQAGYRVLAGVDVWDDALETYRLNHPSVGLEVDMHTVEPSELPLSKEQ----VDVVIGGPPCKGFSLAGERDSDDERNQLVARFLDYVEYFEPATVVMENVVGILSMDLPGYDGSVPDYIHD--RLRSMGFETDHQTLDATNYGIAQTRRRVFFVGTRG 178
BLAST of jgi.p|Trimin1|140345 vs. uniprot
Match: A0A2N3F906_9ACTN (Cytosine-specific methyltransferase n=1 Tax=Actinobacteria bacterium HGW-Actinobacteria-7 TaxID=2013652 RepID=A0A2N3F906_9ACTN) HSP 1 Score: 74.3 bits (181), Expect = 1.090e-12 Identity = 54/168 (32.14%), Postives = 80/168 (47.62%), Query Frame = 1 Query: 1 MEMYCGAGGFTHGVKEY-LDTALATDFSQSARALYARNHPAARVIQGDANERGVQLALITEATRLGVEVGL--GGPPCTHFSQAGKRETHEGWQ-CVLSML--LVHAAIPSLRMTVLENVLGFMSTPQ---WQHTLAAARALGFSFSHHVVTGDDCGLPTMRRRVFLV 477 ++++CGAGG THG+++ DTA A +F +A Y+RN P +I GD + + EV L GGPPC FS AG + H+ + C+ + + + A P+ M ENV G S + L LG+ +V D G P RRR+ +V Sbjct: 5 VDLFCGAGGLTHGLRQAGWDTAAAVEFDAAACLTYSRNFPEVHLIPGDIRA--------VDFSEFAYEVDLVAGGPPCQPFSVAGNQRAHDDPRDCIPAFVRAVSEMAPPAFMM---ENVAGLASRRHALYLEFVLRQLADLGYFVERQIVDAADYGAPQHRRRLIIV 161
BLAST of jgi.p|Trimin1|140345 vs. uniprot
Match: A0A8G0UK06_9BURK (Cytosine-specific methyltransferase n=1 Tax=Diaphorobacter sp. MNS-0 TaxID=2866628 RepID=A0A8G0UK06_9BURK) HSP 1 Score: 73.9 bits (180), Expect = 2.020e-12 Identity = 51/172 (29.65%), Postives = 84/172 (48.84%), Query Frame = 1 Query: 1 MEMYCGAGGFTHGVKEY-LDTALATDFSQSARALYARNHPAARVIQGDANERGVQLALITEATRLGVEVGLGGPPCTHFSQAGKRE---THEGWQCVLSMLLVHAAIPSLRMTVLENVLGFMS------TPQWQHTLAAARALGFSFSHHVVTGDDCGLPTMRRRVFLVLTR 486 ++++ G GG + G+ + + A + Q A Y RNH VIQ D R + + E + GV++ GGPPC FS +GKR+ E V + V A+ ++ ++ENV GF + P + LG+ F V+ + G+P++RRR+F+V +R Sbjct: 6 LDLFAGCGGLSLGLSQAGCEIVAAVEIDQWAADTYRRNHLGVEVIQADI--RSLDSGYLRERFKGGVDLIAGGPPCQGFSVSGKRQYGHIKEQNNLVEEFIRVVEAVEP-KVVLIENVSGFRTGHIKPGNPVMSYLKVELNRLGYEFDARVLQATEYGVPSLRRRIFVVGSR 174 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|140345 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9541 ID=mRNA_9541|Name=jgi.p|Trimin1|140345|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=489bp|location=Sequence derived from alignment at Contig_29:60548..61036- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGAGATGTACTGCGGAGCGGGGGGGTTCACGCACGGAGTCAAGGAGTAback to top protein sequence of jgi.p|Trimin1|140345 >Trimin1|140345|gw1.29.56.1 ID=Trimin1|140345|gw1.29.56.1|Name=jgi.p|Trimin1|140345|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=163bp MEMYCGAGGFTHGVKEYLDTALATDFSQSARALYARNHPAARVIQGDANEback to top mRNA from alignment at Contig_29:60548..61036- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9541 ID=mRNA_9541|Name=jgi.p|Trimin1|140345|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=489bp|location=Sequence derived from alignment at Contig_29:60548..61036- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_29:60548..61036- >mRNA_9541 ID=mRNA_9541|Name=jgi.p|Trimin1|140345|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=489bp|location=Sequence derived from alignment at Contig_29:60548..61036- (Tribonema minus UTEX_B_3156 )back to top |