mRNA_9471 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|173763
Unique NamemRNA_9471
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|173763 vs. uniprot
Match: A0A836CDY1_9STRA (Pept_C1 domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDY1_9STRA)

HSP 1 Score: 481 bits (1237), Expect = 2.880e-171
Identity = 229/246 (93.09%), Postives = 238/246 (96.75%), Query Frame = 1 
Query:    1 MLVKPSPEDTRDYKFKAKTTYSNLPTSVDLTLLLPPALDQGALGSCAANAGSVALRFLYKKQIAQDWLPSRLALYYVTRVYMTGDAPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADELAPAPLVEYRAVNRDEFSLKSALAERNVVIVGIAVYESFMTPLVASTGVVPMPKPGEQCLGGHGCLLIGFTVSTWVLRNSWGMWGKKGNFTLPVAYLTNPNLCFDAWVINKAIES 738
            +LVKPSPEDTRD+KFKAKTTYSNLPTSVDLTLLLPPALDQG LGSCAANAGSVALR+LYKKQIAQDWLPSRLALYYVTRVYMTGD PDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADE+A APLVEYRAVNRDEFSLKSALAERN+VIVGIAVYESFMTPLVASTGVVPMPKPGE CLGGH CLL GFT STW LRNSWGMWGKKGNFTLPVAYLTNP+LCFDAWV++KAIE+
Sbjct:   10 LLVKPSPEDTRDFKFKAKTTYSNLPTSVDLTLLLPPALDQGELGSCAANAGSVALRYLYKKQIAQDWLPSRLALYYVTRVYMTGDTPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADEVASAPLVEYRAVNRDEFSLKSALAERNMVIVGIAVYESFMTPLVASTGVVPMPKPGELCLGGHACLLTGFTTSTWTLRNSWGMWGKKGNFTLPVAYLTNPHLCFDAWVLSKAIET 255
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BLAST of jgi.p|Trimin1|173763 vs. uniprot
Match: A0A836CN22_9STRA (Pept_C1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN22_9STRA)

HSP 1 Score: 226 bits (577), Expect = 2.170e-70
Identity = 126/243 (51.85%), Postives = 156/243 (64.20%), Query Frame = 1 
Query:    4 LVKPSPEDTRDYKFKAKTTYSNLPTSVDL--TLLLPPALDQGALGSCAANAGSVALRFLYKKQIAQDWLPSRLALYYVTRVYMTGDAPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADELAPAPLVEYRAVNRDEFSLKSALAERNVVIVGIAVYESFMTPLVASTGVVPMPKPGEQCLGGHGCLLIGFT--VSTWVLRNSWGMWGKKGNFTLPVAYLTNPNLCFDAWVI 720
            LVK  P+D RD++F      S++P +VDL  T  +PPA+DQG  G+C+A+A S ALRFL +K+  QD+ PSRL +Y+ +RVY+ G AP EDTGC LRD+ KA+S Y +  E Y  Y  +K A  PP L            YRAV +   +LKSALA    VIVGI VYESF +  VA TG VPMP  GEQCLGGH  L +GF     T+ L NSWG WG+ G FTLP  YLTNP+L FD W+I
Sbjct:   48 LVKQKPDD-RDFQF-VSAAKSSIPAAVDLRTTGFVPPAMDQGQAGTCSAHAASSALRFLIRKEKLQDFQPSRLFIYFTSRVYVEGVAPSEDTGCALRDVVKALSTYHVCNERYMPYSDTKIAEHPPALAVANARLHTTFMYRAVQQSLSALKSALASGYPVIVGIQVYESFESDDVARTGNVPMPSDGEQCLGGHAVLCVGFQDKTQTFTLLNSWGQWGQNGFFTLPYDYLTNPDLAFDFWMI 288
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BLAST of jgi.p|Trimin1|173763 vs. uniprot
Match: A0A836CNX1_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNX1_9STRA)

HSP 1 Score: 225 bits (574), Expect = 6.150e-70
Identity = 126/241 (52.28%), Postives = 155/241 (64.32%), Query Frame = 1 
Query:    4 LVKPSPEDTRDYKFKAKTTYSNLPTSVDL--TLLLPPALDQGALGSCAANAGSVALRFLYKKQIAQDWLPSRLALYYVTRVYMTGDAPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADELAPAPLVEYRAVNRDEFSLKSALAERNVVIVGIAVYESFMTPLVASTGVVPMPKPGEQCLGGHGCLLIGFT--VSTWVLRNSWGMWGKKGNFTLPVAYLTNPNLCFDAW 714
            LVK  P D RDY+F A +  S LP +VDL  T  +PP LDQG+ G+C+A+A + ALRFL +K+  QD+ PSRL LYYVTRVY+ G +P ED+GC LRD+ KA++ Y +  E Y  YD +K A  PP L            YRAV +   +LK ALA    V+VG  VYESF +  VA TG VPMP  GEQCLGGH CLLIG+     T+ L NSWG+WG+ G FTLP AYLT+  L  D W
Sbjct:   48 LVKQKP-DNRDYQFVAASRKS-LPAAVDLRTTGCVPPVLDQGSAGTCSAHAAASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMTYDPAKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVLVGFQVYESFESEEVARTGGVPMPAEGEQCLGGHACLLIGYNDATQTFTLLNSWGLWGQNGFFTLPYAYLTDTELACDFW 286
[Close]
BLAST of jgi.p|Trimin1|173763 vs. uniprot
Match: A0A836CEQ3_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEQ3_9STRA)

HSP 1 Score: 211 bits (537), Expect = 8.380e-65
Identity = 122/243 (50.21%), Postives = 153/243 (62.96%), Query Frame = 1 
Query:    4 LVKPSPEDTRDYKFKAKTTYSNLPTSVDL--TLLLPPALDQGALGSCAANAGSVALRFLYKKQIAQDWLPSRLALYYVTRVYMTGDAPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADELAPAPLVEYRAVNRDEFSLKSALAERNVVIVGIAVYESFMTPLVASTGVVPMPKPGEQCLGGHGCLLIGF--TVSTWVLRNSWGM-WGKKGNFTLPVAYLTNPNLCFDAWV 717
            LVK  P+D RDY+F A +  S LP +VDL  T  +PP +DQG+ G+C+A+A + ALRFL +K+  QD+ PSRL LYYVTRVY+ G +P ED+GC LRD+ KA++ Y +  E Y  YD +K A  PP L            YRAV +   +LK ALA    V+VGI VY+SF T  VA TGVVPMP  GEQCLGGH   L+ F     T+ L NSW   WG+ G F L   YLTNP+L  D W+
Sbjct:   13 LVKQKPDD-RDYQFVAASRKS-LPAAVDLRTTGYVPPVMDQGSAGTCSAHATASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMEYDDTKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVVVGIQVYDSFETEEVARTGVVPMPAEGEQCLGGHAVYLVAFEDATRTFTLCNSWSSAWGQGGFFKLSYDYLTNPDLACDFWM 253
[Close]
BLAST of jgi.p|Trimin1|173763 vs. uniprot
Match: A0A835YYL4_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYL4_9STRA)

HSP 1 Score: 193 bits (490), Expect = 2.810e-57
Identity = 102/235 (43.40%), Postives = 141/235 (60.00%), Query Frame = 1 
Query:   25 DTRDYKFKAKTTYSNLPTSVDL--TLLLPPALDQGALGSCAANAGSVALRFLYKKQIAQDWLPSRLALYYVTRVYMTGDAPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADELAPAPLVEYRAVNRDEFSLKSALAERNVVIVGIAVYESFMTPLVASTGVVPMPKPGEQCLGGHGCLLIGF--TVSTWVLRNSWG-MWGKKGNFTLPVAYLTNPNLCFDAW 714
            D RD  F +    + LP +VDL  T  +PP LDQG  G+C+A+A + AL +L +++   D+ P+RL +YY TRVY+ G    +D+GC LRD+CKA+ +Y +P E Y  Y   K +  P  +          + Y AV + E +LK ALA R  V++GI V+ESF +  VA TGVVPMP+ GEQCLGGH   ++G+     T+ L NSW   WG  G FTLP  Y+ +P+L  D W
Sbjct:   52 DRRDIVFSSNVKVATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVADFSPARLYIYYTTRVYVEGTPAFDDSGCVLRDVCKAIKKYHVPDERYEPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDKVAQTGVVPMPQEGEQCLGGHAVDVVGYDDVTRTFTLMNSWSTQWGDSGFFTLPYEYVLDPSLASDFW 286
[Close]
BLAST of jgi.p|Trimin1|173763 vs. uniprot
Match: A0A835Z842_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z842_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.260e-56
Identity = 101/235 (42.98%), Postives = 140/235 (59.57%), Query Frame = 1 
Query:   25 DTRDYKFKAKTTYSNLPTSVDL--TLLLPPALDQGALGSCAANAGSVALRFLYKKQIAQDWLPSRLALYYVTRVYMTGDAPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADELAPAPLVEYRAVNRDEFSLKSALAERNVVIVGIAVYESFMTPLVASTGVVPMPKPGEQCLGGHGCLLIGF--TVSTWVLRNSWG-MWGKKGNFTLPVAYLTNPNLCFDAW 714
            D RD  F +    + LP +VDL  T  +PP LDQG  G+C+A+A + AL +L +++   D+ P+RL +YY TRVY+ G    +D+GC LRD+CKA+ +Y +P E +  Y   K +  P  +          + Y AV + E +LK ALA R  V++GI V+ESF +  VA TGVVPMP+ GEQCLGGH   ++G+     T+ L NSW   WG  G FTLP  Y+ + NL  D W
Sbjct:   44 DRRDIVFSSNVKVATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVADFSPARLYIYYTTRVYVEGIPASDDSGCVLRDVCKAIKKYHVPDERFEPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDAVAQTGVVPMPQEGEQCLGGHAVDVVGYDDATRTFTLMNSWSTQWGDSGFFTLPYEYVLDSNLASDFW 278
[Close]
BLAST of jgi.p|Trimin1|173763 vs. uniprot
Match: A0A836CMZ0_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMZ0_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.590e-56
Identity = 104/239 (43.51%), Postives = 145/239 (60.67%), Query Frame = 1 
Query:   22 EDTRDYKFKAKTTYSNLPTSVDL--TLLLPPALDQGALGSCAANAGSVALRFLYKKQIAQDWLPSRLALYYVTRVYMTGDAPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADELAPAPLVEYRAVNRDEFSLKSALAERNVVIVGIAVYESFMTPLVASTGVVPMPKPGEQCLGGHGCLLIGFT--VSTWVLRNSWGMWGKKGNFTLPVAYLTNPNLCFDAWVINK 726
            ED+RDY F A    S +P  VDL  T  L P L+QG+ G+C+A+A + ALR+L +K+  QD+ PSRL +YY TRV + G +P+ D+GC LRD+C+A+ ++    E Y  Y  ++    PP L            YRAV +   +L+ ALA    VIVGI VY++F +  VA+TGVVPMP   E+CLGGH  LL+ +     T+ L+NSWG WG+ G F+LP  YL +  L  D W + +
Sbjct:   53 EDSRDYSFVASFRNS-IPQKVDLRSTGFLGPVLNQGSAGTCSAHAAAAALRYLLRKEHVQDFPPSRLFVYYTTRVNIEGISPEIDSGCVLRDVCRALQKFHTCNERYMAYSDTQITERPPALAVANARLHTTFAYRAVEQTLSALRGALATGYPVIVGIQVYQTFESEEVANTGVVPMPSHNEECLGGHAVLLVAYDDETRTFTLQNSWGEWGQDGFFSLPYDYLIDTGLAGDFWCLTR 290
[Close]
BLAST of jgi.p|Trimin1|173763 vs. uniprot
Match: A0A836CBQ3_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBQ3_9STRA)

HSP 1 Score: 188 bits (478), Expect = 3.140e-55
Identity = 104/235 (44.26%), Postives = 143/235 (60.85%), Query Frame = 1 
Query:   25 DTRDYKFKAKTTYSNLPTSVDLTL--LLPPALDQGALGSCAANAGSVALRFLYKKQIAQDWLPSRLALYYVTRVYMTGDAPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADELAPAPLVEYRAVNRDEFSLKSALAERNVVIVGIAVYESFMTPLVASTGVVPMPKPGEQCLGGHGCLLIGFTVST--WVLRNSWGM-WGKKGNFTLPVAYLTNPNLCFDAW 714
            D+RD  F +    +++P SVDL     +PP LDQ + G+C+A+A + AL +L K++   D+ P+RL +YY TRVY+ G    ED+GC LRD+ KA+  Y +P E Y  Y   K +  P  +          ++YRAV + E  LK ALA    V++GI VYESF +  VA+TG VPMP+ GE+CLG H  L IGF  +T  + L NSWG+ +G KG FTLP  Y+ +PNL  D W
Sbjct:   72 DSRDLVFTSTINGADMPLSVDLRTSGFMPPVLDQQSAGTCSAHASANALHYLLKREKVADFSPARLYIYYTTRVYVEGTPATEDSGCVLRDVGKAIKTYHVPDEKYEPYSDKKISQRPSAMAVANARLHTTLKYRAVAQTEHDLKGALAAGFPVMIGIQVYESFESDEVAATGEVPMPEDGEECLGAHATLCIGFDDATRKFKLMNSWGVAFGDKGFFTLPYEYVLDPNLASDFW 306
[Close]
BLAST of jgi.p|Trimin1|173763 vs. uniprot
Match: A0A538AF61_9ACTN (Peptidase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538AF61_9ACTN)

HSP 1 Score: 167 bits (424), Expect = 9.250e-48
Identity = 94/222 (42.34%), Postives = 126/222 (56.76%), Query Frame = 1 
Query:   64 SNLPTSVDLTLLLPPALDQGALGSCAANAGSVALRFLYKKQIAQDWLPSRLALYYVTRVYMTGDAPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADELAPAPLVEYRAVNRDEFSLKSALAERNVVIVGIAVYESFMTPLVASTGVVPMPKPGEQCLGGHGCLLIGF--TVSTWVLRNSWGM-WGKKGNFTLPVAYLTNPNLCFDAWVI 720
            + LP   DL   +PP  DQG LGSC ANA   A  F   K+  +D+ PSRL +YY  R  M G   D D+G  +RD  K++++  + PE  W YDI KF   PP    DE +    V YR V      ++  LA     ++G +VYESFM+P VA TG VP+P  GEQ +GGH  + +G+  ++  +++RNSWG  WG KG  T+P  YLT+P L  D W I
Sbjct:   10 TKLPKKTDLRSKMPPVYDQGQLGSCTANAIGGAYEFDQIKEGLKDFTPSRLFIYYNERA-MEGTV-DTDSGAMIRDGMKSVAKVGVCPETTWPYDIPKFTEKPPKTAYDEASKHQAVVYRRVLGTLHQMQGCLASGYPFVLGFSVYESFMSPEVAKTGEVPLPPRGEQLIGGHAVVAVGYDDSIQRFIVRNSWGTGWGMKGYCTMPYGYLTDPQLARDFWAI 229
[Close]
BLAST of jgi.p|Trimin1|173763 vs. uniprot
Match: UPI00165634E3 (C1 family peptidase n=3 Tax=Caballeronia TaxID=1827195 RepID=UPI00165634E3)

HSP 1 Score: 164 bits (415), Expect = 1.800e-46
Identity = 99/237 (41.77%), Postives = 135/237 (56.96%), Query Frame = 1 
Query:   25 DTRDYKFKAKTT-YSNLPTSVDLTLLLPPALDQGALGSCAANAGSVALRFLYKKQIAQD-WLPSRLALYYVTRVYMTGDAPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADELAPAPLVEYRAVNRDEFSLKSALAERNVVIVGIAVYESFMTPLVASTGVVPMPKPGEQCLGGHGCLLIGF--TVSTWVLRNSWGM-WGKKGNFTLPVAYLTNPNLCFDAWVI 720
            D RD+ + A  T  + LP SVDLT   PP  DQG+LGSC AN  + AL+F   KQ  Q  + PSRL +YY  RV       D D+G  +RD  K++++    PE  W YDI +F   PP     E     +V+Y  + ++   +K  LA+   ++ G +VYESF +  VA TG+VPMP P EQ LGGH  + +G+      +++RNSWG  WGK G  T+P AYLT+ +L  D W I
Sbjct:   16 DHRDHLYAAPVTRLAALPASVDLTAQCPPVYDQGSLGSCTANGIAAALQFDRMKQNLQPPFNPSRLFIYYNERVIE--HTVDSDSGAMIRDGFKSVAKQGDCPETSWPYDIGQFRSKPPKNCYTEALKYKVVQYSRLVQNLNQMKGCLADGYPIVFGFSVYESFESAEVAQTGIVPMPSPQEQLLGGHCVVAVGYDDAQQRFIVRNSWGEGWGKNGYCTMPYAYLTDTDLSSDFWTI 250
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|173763 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CDY1_9STRA2.880e-17193.09Pept_C1 domain-containing protein n=2 Tax=Tribonem... [more]
A0A836CN22_9STRA2.170e-7051.85Pept_C1 domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CNX1_9STRA6.150e-7052.28Papain cysteine protease family protein n=1 Tax=Tr... [more]
A0A836CEQ3_9STRA8.380e-6550.21Papain cysteine protease family protein n=1 Tax=Tr... [more]
A0A835YYL4_9STRA2.810e-5743.40Papain cysteine protease family protein n=1 Tax=Tr... [more]
A0A835Z842_9STRA1.260e-5642.98Papain cysteine protease family protein n=1 Tax=Tr... [more]
A0A836CMZ0_9STRA1.590e-5643.51Papain cysteine protease family protein n=1 Tax=Tr... [more]
A0A836CBQ3_9STRA3.140e-5544.26Papain cysteine protease family protein n=1 Tax=Tr... [more]
A0A538AF61_9ACTN9.250e-4842.34Peptidase n=1 Tax=Actinomycetia bacterium TaxID=18... [more]
UPI00165634E31.800e-4641.77C1 family peptidase n=3 Tax=Caballeronia TaxID=182... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_106contigContig_106:53555..54295 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|173763|e_gw1.106.15.1
Descriptioncysteine protease
COG categoryO
Max annot lvl28216|Betaproteobacteria
EggNOG OGsCOG4870@1|root,COG4870@2|Bacteria,1MV6S@1224|Proteobacteria,2VN18@28216|Betaproteobacteria
Evalue1.17e-46
Seed ortholog1458357.BG58_11775
Hectar predicted targeting categoryother localisation
TranscriptId174085
TrackFilteredModels1
ProteinId173763
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|173763gene_9471Tribonema minus UTEX_B_3156 geneContig_106 53555..54295 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9471_1exon_9471_1Tribonema minus UTEX_B_3156 exonContig_106 53555..54295 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9471CDS_9471Tribonema minus UTEX_B_3156 CDSContig_106 53555..54295 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|173763Trimin1|173763|e_gw1.106.15.1Tribonema minus UTEX_B_3156 polypeptideContig_106 53555..54295 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9471 ID=mRNA_9471|Name=jgi.p|Trimin1|173763|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=741bp|location=Sequence derived from alignment at Contig_106:53555..54295- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTTGGTGAAGCCGTCGCCCGAAGACACTCGCGACTACAAGTTCAAGGC
GAAGACGACATATAGCAATCTGCCCACCTCTGTCGATCTCACCCTGCTTC
TGCCCCCTGCGCTGGATCAAGGCGCGTTGGGCAGTTGCGCGGCGAATGCT
GGCAGCGTCGCGCTGCGTTTCCTATACAAGAAGCAGATCGCACAAGATTG
GTTGCCTTCTCGCCTTGCACTGTATTATGTAACACGCGTGTACATGACTG
GCGATGCTCCCGATGAGGACACCGGTTGTTACCTCCGTGATTTGTGTAAG
GCCATGAGTCGGTATCAGCTCCCGCCTGAGATATATTGGCGATACGACAT
TAGCAAGTTCGCATTGCCCCCGCCCTTTCTTCAAGCCGACGAACTGGCGC
CCGCGCCGCTGGTTGAGTACAGAGCTGTCAACCGTGACGAGTTCTCGCTC
AAGAGCGCTCTGGCTGAGAGGAACGTGGTTATCGTGGGTATCGCAGTGTA
CGAATCGTTCATGACCCCGCTGGTTGCAAGCACGGGCGTCGTGCCGATGC
CCAAACCGGGCGAGCAGTGCCTCGGCGGTCACGGTTGTTTACTGATTGGG
TTCACTGTGTCGACATGGGTGCTTCGGAACAGCTGGGGTATGTGGGGGAA
GAAAGGCAACTTTACATTGCCTGTTGCATATCTGACAAACCCAAACTTGT
GCTTTGACGCATGGGTGATCAACAAGGCAATAGAATCGTAA
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protein sequence of jgi.p|Trimin1|173763

>Trimin1|173763|e_gw1.106.15.1 ID=Trimin1|173763|e_gw1.106.15.1|Name=jgi.p|Trimin1|173763|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=247bp
MLVKPSPEDTRDYKFKAKTTYSNLPTSVDLTLLLPPALDQGALGSCAANA
GSVALRFLYKKQIAQDWLPSRLALYYVTRVYMTGDAPDEDTGCYLRDLCK
AMSRYQLPPEIYWRYDISKFALPPPFLQADELAPAPLVEYRAVNRDEFSL
KSALAERNVVIVGIAVYESFMTPLVASTGVVPMPKPGEQCLGGHGCLLIG
FTVSTWVLRNSWGMWGKKGNFTLPVAYLTNPNLCFDAWVINKAIES*
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mRNA from alignment at Contig_106:53555..54295-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9471 ID=mRNA_9471|Name=jgi.p|Trimin1|173763|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=741bp|location=Sequence derived from alignment at Contig_106:53555..54295- (Tribonema minus UTEX_B_3156 )
ATGTTGGTGAAGCCGTCGCCCGAAGACACTCGCGACTACAAGTTCAAGGC
GAAGACGACATATAGCAATCTGCCCACCTCTGTCGATCTCACCCTGCTTC
TGCCCCCTGCGCTGGATCAAGGCGCGTTGGGCAGTTGCGCGGCGAATGCT
GGCAGCGTCGCGCTGCGTTTCCTATACAAGAAGCAGATCGCACAAGATTG
GTTGCCTTCTCGCCTTGCACTGTATTATGTAACACGCGTGTACATGACTG
GCGATGCTCCCGATGAGGACACCGGTTGTTACCTCCGTGATTTGTGTAAG
GCCATGAGTCGGTATCAGCTCCCGCCTGAGATATATTGGCGATACGACAT
TAGCAAGTTCGCATTGCCCCCGCCCTTTCTTCAAGCCGACGAACTGGCGC
CCGCGCCGCTGGTTGAGTACAGAGCTGTCAACCGTGACGAGTTCTCGCTC
AAGAGCGCTCTGGCTGAGAGGAACGTGGTTATCGTGGGTATCGCAGTGTA
CGAATCGTTCATGACCCCGCTGGTTGCAAGCACGGGCGTCGTGCCGATGC
CCAAACCGGGCGAGCAGTGCCTCGGCGGTCACGGTTGTTTACTGATTGGG
TTCACTGTGTCGACATGGGTGCTTCGGAACAGCTGGGGTATGTGGGGGAA
GAAAGGCAACTTTACATTGCCTGTTGCATATCTGACAAACCCAAACTTGT
GCTTTGACGCATGGGTGATCAACAAGGCAATAGAATCGTAA
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Coding sequence (CDS) from alignment at Contig_106:53555..54295-

>mRNA_9471 ID=mRNA_9471|Name=jgi.p|Trimin1|173763|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=741bp|location=Sequence derived from alignment at Contig_106:53555..54295- (Tribonema minus UTEX_B_3156 )
ATGTTGGTGAAGCCGTCGCCCGAAGACACTCGCGACTACAAGTTCAAGGC
GAAGACGACATATAGCAATCTGCCCACCTCTGTCGATCTCACCCTGCTTC
TGCCCCCTGCGCTGGATCAAGGCGCGTTGGGCAGTTGCGCGGCGAATGCT
GGCAGCGTCGCGCTGCGTTTCCTATACAAGAAGCAGATCGCACAAGATTG
GTTGCCTTCTCGCCTTGCACTGTATTATGTAACACGCGTGTACATGACTG
GCGATGCTCCCGATGAGGACACCGGTTGTTACCTCCGTGATTTGTGTAAG
GCCATGAGTCGGTATCAGCTCCCGCCTGAGATATATTGGCGATACGACAT
TAGCAAGTTCGCATTGCCCCCGCCCTTTCTTCAAGCCGACGAACTGGCGC
CCGCGCCGCTGGTTGAGTACAGAGCTGTCAACCGTGACGAGTTCTCGCTC
AAGAGCGCTCTGGCTGAGAGGAACGTGGTTATCGTGGGTATCGCAGTGTA
CGAATCGTTCATGACCCCGCTGGTTGCAAGCACGGGCGTCGTGCCGATGC
CCAAACCGGGCGAGCAGTGCCTCGGCGGTCACGGTTGTTTACTGATTGGG
TTCACTGTGTCGACATGGGTGCTTCGGAACAGCTGGGGTATGTGGGGGAA
GAAAGGCAACTTTACATTGCCTGTTGCATATCTGACAAACCCAAACTTGT
GCTTTGACGCATGGGTGATCAACAAGGCAATAGAATCGTAA
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