mRNA_9466 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|152322 vs. uniprot
Match: A0A835ZEF0_9STRA (ULP_PROTEASE domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEF0_9STRA) HSP 1 Score: 364 bits (934), Expect = 1.260e-127 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1
Query: 1 RLRPNEWLSGDVMTGYATLLNEREARRRAVNDRRSRRHVFHSFLYAGMCNNGYEGVKRWSTKAKVDVFACSLLVFLCNVNGNHWTVVVARMRQRRIEYFDSNGGAGVAEMDMIRSYLQQEHLDKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYVVEDMPFDFRQDD 522
RLRPNEWLSGDVMTGYATLLNEREARRRAVNDRRSRRHVFHSFLYAGMCNNGYEGVKRWSTKAKVDVFACSLLVFLCNVNGNHWTVVVARMRQRRIEYFDSNGGAGVAEMDMIRSYLQQEHLDKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYVVEDMPFDFRQDD
Sbjct: 1 RLRPNEWLSGDVMTGYATLLNEREARRRAVNDRRSRRHVFHSFLYAGMCNNGYEGVKRWSTKAKVDVFACSLLVFLCNVNGNHWTVVVARMRQRRIEYFDSNGGAGVAEMDMIRSYLQQEHLDKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYVVEDMPFDFRQDD 174
BLAST of jgi.p|Trimin1|152322 vs. uniprot
Match: A0A835YY08_9STRA (ULP_PROTEASE domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY08_9STRA) HSP 1 Score: 322 bits (825), Expect = 5.300e-111 Identity = 153/174 (87.93%), Postives = 162/174 (93.10%), Query Frame = 1
Query: 1 RLRPNEWLSGDVMTGYATLLNEREARRRAVNDRRSRRHVFHSFLYAGMCNNGYEGVKRWSTKAKVDVFACSLLVFLCNVNGNHWTVVVARMRQRRIEYFDSNGGAGVAEMDMIRSYLQQEHLDKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYVVEDMPFDFRQDD 522
RLRPNEWLSGDVMTGYATLLNEREARRRAV+ RR RRHVFHSFLY GMC+NGYE VK+WSTKAKVDVFACSLLVFLCNVN HWTVVVARM QRR+EYFDS GG G+AEM+ I SYLQ+EH DKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEY+V+DMPFDFRQDD
Sbjct: 1 RLRPNEWLSGDVMTGYATLLNEREARRRAVHPRRGRRHVFHSFLYKGMCDNGYERVKKWSTKAKVDVFACSLLVFLCNVNRIHWTVVVARMAQRRLEYFDSLGGDGLAEMNTIESYLQREHADKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYIVDDMPFDFRQDD 174
BLAST of jgi.p|Trimin1|152322 vs. uniprot
Match: A0A835ZFD9_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFD9_9STRA) HSP 1 Score: 139 bits (349), Expect = 3.690e-38 Identity = 61/122 (50.00%), Postives = 81/122 (66.39%), Query Frame = 1
Query: 157 YEGVKRWSTKAKVDVFACSLLVFLCNVNGNHWTVVVARMRQRRIEYFDSNGGAGVAEMDMIRSYLQQEHLDKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYVVEDMPFDFRQDD 522
Y VKRWSTKAK+DVF ++F N+ HW + + ++++RIEY DS G G+ M + Y + EH DKK SPL G+WTR S+ +SPQQ NG DCGVF L A+YV+ ++P DF QDD
Sbjct: 77 YNNVKRWSTKAKLDVFEADKILFPHNIGNMHWCLAIVHVQEKRIEYMDSMSGDGLGAMSALFRYFKDEHADKKGSPLKGMWTRYSYRDTSPQQKNGCDCGVFTLPNADYVLGELPLDFHQDD 198
BLAST of jgi.p|Trimin1|152322 vs. uniprot
Match: A0A836CHU4_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHU4_9STRA) HSP 1 Score: 130 bits (327), Expect = 3.000e-35 Identity = 58/140 (41.43%), Postives = 85/140 (60.71%), Query Frame = 1
Query: 106 RRHVFHSFLYAGMCNNGYE--GVKRWSTKAKVDVFACSLLVFLCNVNGNHWTVVVARMRQRRIEYFDSNGGAGVAEMDMIRSYLQQEHLDKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYVVEDMPFDFRQD 519
R H F+S+ + + N Y GV+RW+ KAKVD+F ++ NV HW + V +++RRI+Y+DS GG G ++ + +L+ EH DKK +PL WT+ +PQQ NG DCGVF A+Y+ ED+P +F QD
Sbjct: 20 RSHFFNSYFLSKLTENSYNYPGVRRWTKKAKVDIFTLDKVIMPANVGNMHWCLAVIYVQERRIQYYDSMGGRGTTFLNALERWLEDEHKDKKGAPLGATWTKVPTIDGTPQQENGCDCGVFTCMFADYISEDLPLEFGQD 159
BLAST of jgi.p|Trimin1|152322 vs. uniprot
Match: A0A835YXA5_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXA5_9STRA) HSP 1 Score: 125 bits (315), Expect = 9.860e-33 Identity = 67/179 (37.43%), Postives = 102/179 (56.98%), Query Frame = 1
Query: 1 RLRPNEWLSGDVMTGYATLLNEREARRRAVNDRRSRRHVFHSFLYA---GMCNNGYEGVKRWSTKAKV--DVFACSLLVFLCNVNGNHWTVVVARMRQRRIEYFDSNGGAGVAEMDMIRSYLQQEHLDKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYVVEDMPFDFRQDD 522
RL WL+ +V++ Y LLNER+A+ A + R + H+F + G + E + R +K V DVF+ + N+ G HW +V ++ R+EY DS GG G+ M+ + ++L+ EH +K LP W S+ ++PQQANG DCGVFA ++++E +PFDFRQDD
Sbjct: 27 RLEGTTWLNDEVISAYTWLLNERDAKYCAADPSRRPCYAMHTFFASTLHGSQSKTPERISRALSKYAVPLDVFSLDKWLVPINIGGMHWAAMVVHCQKMRVEYVDSMGGRGIEFMEGMLAFLKYEHRVRKGRELPPGWQMFSYQHTTPQQANGCDCGVFACITMDFIMEGLPFDFRQDD 205
BLAST of jgi.p|Trimin1|152322 vs. uniprot
Match: A0A7S2V080_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V080_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.520e-31 Identity = 72/178 (40.45%), Postives = 96/178 (53.93%), Query Frame = 1
Query: 4 LRPNEWLSGDVMTGYATLLNEREARRRAVNDRRSRRHVF-HSFLYAGM-CNNGYE--GVKRWSTKAKVDVFACSLLVFLCNVNGNHWTVVVARMRQRRIEYFDSNGGAGVAEMDMIRSYLQQEHLDKKKSPLP-GVWTRRSHGTSSPQQANGVDCGVFALTVAEYVVEDMPFDFRQDD 522
L P WL +V+ Y LL +RE R A + R + R VF +SF A + + GY V+RW+ + K+DVF+ +V NV HW + + Q+RI+Y+DS GGAG + + YLQ E DKKK L W +PQQ NG DCGVFA A+YV E +P F Q D
Sbjct: 74 LEPTVWLLDEVINLYINLLEDREKRHMAESGRTTPRAVFMNSFFMARLFVDEGYRYANVRRWTRRRKLDVFSAERVVVPVNVGNMHWCLACVHVPQKRIQYYDSMGGAGRNYLGALAQYLQDEMKDKKKETLDINDWEMVGTVQGTPQQNNGCDCGVFACMFADYVSEGLPLSFSQKD 251
BLAST of jgi.p|Trimin1|152322 vs. uniprot
Match: A0A4P9YT46_9FUNG (ULP_PROTEASE domain-containing protein n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YT46_9FUNG) HSP 1 Score: 122 bits (306), Expect = 1.540e-31 Identity = 66/171 (38.60%), Postives = 96/171 (56.14%), Query Frame = 1
Query: 4 LRPNEWLSGDVMTGYATLLNEREARRRAVNDRRSRRHVFHSFLYAGMCNNGYEGVKRWSTKAKVDVFACSLLVFLCNVNGNHWTVVVARMRQRRIEYFDSNGGAGVAEMDMIRSYLQQEHLDKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYVVEDMPFDFRQ 516
LR +WL+ +++ Y LL ER +++R + H F++F Y+ + +GY V+RW+ + VD+F LL+ ++ G HW + R++RIEY+DS G+ ++R YLQQE LDK+K P + P QANG DCGVFA T AEY PFDF Q
Sbjct: 32 LRDRQWLNDEIINFYTQLLMERANH----DEQRPKIHCFNTFFYSTLSESGYARVRRWTKR--VDIFTKDLLIVPVHL-GMHWCCAIVNFRRKRIEYYDSLFGSNQHCFALLRDYLQQESLDKRKCPFDLDGWQYYEAKDIPGQANGYDCGVFACTFAEYASRAEPFDFSQ 195
BLAST of jgi.p|Trimin1|152322 vs. uniprot
Match: A0A1E7FR00_9STRA (Cysteine proteinase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FR00_9STRA) HSP 1 Score: 117 bits (292), Expect = 3.090e-29 Identity = 63/184 (34.24%), Postives = 97/184 (52.72%), Query Frame = 1
Query: 4 LRPNEWLSGDVMTGYATLLNEREARRRAVNDRRSRRHVFHSFLYAGMCNNG---------YEGVKRWSTKAK-VDVFACSLLVFLCNVNGNHWTVVVARMRQRRIEYFDSNGGAGVAEMDMIRSYLQQEHLDKKKSPLPGV--WTRRSHGTSSPQQANGVDCGVFALTVAEYVVEDMPFDFRQD 519
L+P WL+ +V+ + +L++R+ ++ R R H F SF + N G Y VKRWS K D+F ++F N+ HW V M+++RIE FDS G G ++ + SY+Q EH+DKKK+PL + W ++P+Q NG DCGVF A+++ +D F Q+
Sbjct: 42 LKPGMWLNDEVIHYFYLMLSKRDEELCKIDPTRQRSHFFKSFFITKILNEGSASCDGKYEYRNVKRWSKKVPGKDIFKLDKILFPINMGNMHWIAAVIFMKKKRIEIFDSMGSDGSRYLNALFSYIQDEHMDKKKTPLTDIDEWELVPTQRATPRQRNGHDCGVFTCMFADFLSKDTALVFNQN 225
BLAST of jgi.p|Trimin1|152322 vs. uniprot
Match: A0A7S3WJU3_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WJU3_EMIHU) HSP 1 Score: 119 bits (299), Expect = 4.180e-29 Identity = 62/180 (34.44%), Postives = 99/180 (55.00%), Query Frame = 1
Query: 4 LRPNEWLSGDVMTGYATLLNEREARRRAVNDRRSRRHVFHSFLYAGMCNNG---YEGVKRWSTKAKVDVFACSLLVFLCNVNGNHWTVVVARMRQRRIEYFDSNGGAGVAEMDMIRSYLQQEHLDKKKSPLP--GVWTRRSHGTS--SPQQANGVDCGVFALTVAEYVVEDMPFDFRQDD 522
L+P EWL+ +V+ + LL + + + + H+F S Y + + Y V+RW+ +AKVD+F+ L++ N +HWT+ + +RQ+R E+ DS G+ + ++R YL+ EH DKK +PL W S+ + +P+Q NG DCG+F AEY+V D DF Q D
Sbjct: 185 LKPLEWLNDEVINCFVELLRQHASEAEQAGEPLPKVHIFSSLFYTKLAESPEYTYGNVRRWTKRAKVDLFSRDLVIVPINQGNSHWTLGLINLRQKRFEFIDSMHGSDGGRLAVLRRYLKDEHQDKKGAPLDLGEDWVDISYTAADGTPRQTNGFDCGMFMSRTAEYLVRDAVLDFTQAD 364
BLAST of jgi.p|Trimin1|152322 vs. uniprot
Match: A0A433D3A8_9FUNG (ULP_PROTEASE domain-containing protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433D3A8_9FUNG) HSP 1 Score: 120 bits (300), Expect = 2.610e-28 Identity = 64/171 (37.43%), Postives = 99/171 (57.89%), Query Frame = 1
Query: 4 LRPNEWLSGDVMTGYATLLNEREARRRAVNDRRSRRHVFHSFLYAGMCNNGYEGVKRWSTKAKVDVFACSLLVFLCNVNGNHWTVVVARMRQRRIEYFDSNGGAGVAEMDMIRSYLQQEHLDKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYVVEDMPFDFRQ 516
L+ +WL+ +V+ Y L+NER ++ + + H F++F Y+ + + G++ VKRW+ K +D+F+ S ++ ++ G HW V + R+EY+DS GA ++R+Y+QQE LDKKK P + P Q NG DCGVFA TVAEY+ + PFDF Q
Sbjct: 485 LKDGQWLNDEVINYYMILINERS---KSQEGKYPKVHCFNTFFYSNLRDYGFQKVKRWTKK--IDLFSKSYVIVPVHL-GMHWCCAVINFVKHRVEYYDSLHGANPDCHKILRAYIQQESLDKKKEPYDLSDWEDYEPKTCPNQENGYDCGVFASTVAEYISREEPFDFGQ 649 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|152322 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9466 ID=mRNA_9466|Name=jgi.p|Trimin1|152322|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=522bp|location=Sequence derived from alignment at Contig_106:46953..47474- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CGTCTGCGACCGAACGAGTGGCTCTCTGGCGATGTGATGACCGGTTACGCback to top protein sequence of jgi.p|Trimin1|152322 >Trimin1|152322|gw1.106.78.1 ID=Trimin1|152322|gw1.106.78.1|Name=jgi.p|Trimin1|152322|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=174bp RLRPNEWLSGDVMTGYATLLNEREARRRAVNDRRSRRHVFHSFLYAGMCNback to top mRNA from alignment at Contig_106:46953..47474- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9466 ID=mRNA_9466|Name=jgi.p|Trimin1|152322|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=522bp|location=Sequence derived from alignment at Contig_106:46953..47474- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_106:46953..47474- >mRNA_9466 ID=mRNA_9466|Name=jgi.p|Trimin1|152322|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=522bp|location=Sequence derived from alignment at Contig_106:46953..47474- (Tribonema minus UTEX_B_3156 )back to top |