mRNA_9457 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|173813 vs. uniprot
Match: A0A836CNX1_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNX1_9STRA) HSP 1 Score: 592 bits (1525), Expect = 9.030e-214 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 1 Query: 1 MIETCGPVVDKLLETNAARLKKFVESQAAELQKGGRLPVSSGGRRYGLVKQKPDNRDYQFVAASRKSLPAAVDLRTTGCVPPVLDQGSAGTCSAHAAASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMTYDPAKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVLVGFQVYESFESEEVARTGGVPMPAEGEQCLGGHACLLIGYNDATQTFTLLNSWGLWGQNGFFTLPYAYLTDTELACDFWTASGFA 876 MIETCGPVVDKLLETNAARLKKFVESQAAELQKGGRLPVSSGGRRYGLVKQKPDNRDYQFVAASRKSLPAAVDLRTTGCVPPVLDQGSAGTCSAHAAASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMTYDPAKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVLVGFQVYESFESEEVARTGGVPMPAEGEQCLGGHACLLIGYNDATQTFTLLNSWGLWGQNGFFTLPYAYLTDTELACDFWTASGFA Sbjct: 1 MIETCGPVVDKLLETNAARLKKFVESQAAELQKGGRLPVSSGGRRYGLVKQKPDNRDYQFVAASRKSLPAAVDLRTTGCVPPVLDQGSAGTCSAHAAASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMTYDPAKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVLVGFQVYESFESEEVARTGGVPMPAEGEQCLGGHACLLIGYNDATQTFTLLNSWGLWGQNGFFTLPYAYLTDTELACDFWTASGFA 292
BLAST of jgi.p|Trimin1|173813 vs. uniprot
Match: A0A836CN22_9STRA (Pept_C1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN22_9STRA) HSP 1 Score: 473 bits (1216), Expect = 1.110e-166 Identity = 222/291 (76.29%), Postives = 258/291 (88.66%), Query Frame = 1 Query: 1 MIETCGPVVDKLLETNAARLKKFVESQAAELQKGGRLPVSSGGRRYGLVKQKPDNRDYQFVAASRKSLPAAVDLRTTGCVPPVLDQGSAGTCSAHAAASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMTYDPAKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVLVGFQVYESFESEEVARTGGVPMPAEGEQCLGGHACLLIGYNDATQTFTLLNSWGLWGQNGFFTLPYAYLTDTELACDFWTASGF 873 MI+TCGP++D+LL NAA+L K ++SQAAEL+K LPVS+GG+RYGLVKQKPD+RD+QFV+A++ S+PAAVDLRTTG VPP +DQG AGTCSAHAA+SALRFL+RKEKLQDF PSRLF+Y+ +RVYVEGV+PSED+GCALRDV KA++TYHVCNERYM Y KIAE PPALAVANARLHTTF YRAVQQSLSALK ALASGYPV+VG QVYESFES++VARTG VPMP++GEQCLGGHA L +G+ D TQTFTLLNSWG WGQNGFFTLPY YLT+ +LA DFW +GF Sbjct: 1 MIDTCGPLIDRLLHINAAKLNKIIQSQAAELEKRDNLPVSTGGKRYGLVKQKPDDRDFQFVSAAKSSIPAAVDLRTTGFVPPAMDQGQAGTCSAHAASSALRFLIRKEKLQDFQPSRLFIYFTSRVYVEGVAPSEDTGCALRDVVKALSTYHVCNERYMPYSDTKIAEHPPALAVANARLHTTFMYRAVQQSLSALKSALASGYPVIVGIQVYESFESDDVARTGNVPMPSDGEQCLGGHAVLCVGFQDKTQTFTLLNSWGQWGQNGFFTLPYDYLTNPDLAFDFWMITGF 291
BLAST of jgi.p|Trimin1|173813 vs. uniprot
Match: A0A836CEQ3_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEQ3_9STRA) HSP 1 Score: 435 bits (1119), Expect = 1.920e-152 Identity = 215/248 (86.69%), Postives = 226/248 (91.13%), Query Frame = 1 Query: 133 RYGLVKQKPDNRDYQFVAASRKSLPAAVDLRTTGCVPPVLDQGSAGTCSAHAAASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMTYDPAKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVLVGFQVYESFESEEVARTGGVPMPAEGEQCLGGHACLLIGYNDATQTFTLLNSWG-LWGQNGFFTLPYAYLTDTELACDFWTASGF 873 RYGLVKQKPD+RDYQFVAASRKSLPAAVDLRTTG VPPV+DQGSAGTCSAHA ASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYM YD KIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPV+VG QVY+SFE+EEVARTG VPMPAEGEQCLGGHA L+ + DAT+TFTL NSW WGQ GFF L Y YLT+ +LACDFW +GF Sbjct: 10 RYGLVKQKPDDRDYQFVAASRKSLPAAVDLRTTGYVPPVMDQGSAGTCSAHATASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMEYDDTKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVVVGIQVYDSFETEEVARTGVVPMPAEGEQCLGGHAVYLVAFEDATRTFTLCNSWSSAWGQGGFFKLSYDYLTNPDLACDFWMTTGF 257
BLAST of jgi.p|Trimin1|173813 vs. uniprot
Match: A0A836CMZ0_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMZ0_9STRA) HSP 1 Score: 421 bits (1081), Expect = 3.950e-146 Identity = 199/292 (68.15%), Postives = 240/292 (82.19%), Query Frame = 1 Query: 1 MIETCGPVVDKLLETNAARLKKFVESQAAELQKGGRLPVSSGGRRYGLVKQKPDNRDYQFVAASRKSLPAAVDLRTTGCVPPVLDQGSAGTCSAHAAASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMTYDPAKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVLVGFQVYESFESEEVARTGGVPMPAEGEQCLGGHACLLIGYNDATQTFTLLNSWGLWGQNGFFTLPYAYLTDTELACDFWTASGFA 876 MI T GP++DKLLETNAARL+KF ++A + +K LP S+GGRRYG +KQK D+RDY FVA+ R S+P VDLR+TG + PVL+QGSAGTCSAHAAA+ALR+LLRKE +QDFPPSRLF+YY TRV +EG+SP DSGC LRDV +A+ +H CNERYM Y +I E+PPALAVANARLHTTF YRAV+Q+LSAL+GALA+GYPV+VG QVY++FESEEVA TG VPMP+ E+CLGGHA LL+ Y+D T+TFTL NSWG WGQ+GFF+LPY YL DT LA DFW + FA Sbjct: 1 MISTSGPLIDKLLETNAARLEKFERTEAGDAKKPAHLPASAGGRRYGTIKQKEDSRDYSFVASFRNSIPQKVDLRSTGFLGPVLNQGSAGTCSAHAAAAALRYLLRKEHVQDFPPSRLFVYYTTRVNIEGISPEIDSGCVLRDVCRALQKFHTCNERYMAYSDTQITERPPALAVANARLHTTFAYRAVEQTLSALRGALATGYPVIVGIQVYQTFESEEVANTGVVPMPSHNEECLGGHAVLLVAYDDETRTFTLQNSWGEWGQDGFFSLPYDYLIDTGLAGDFWCLTRFA 292
BLAST of jgi.p|Trimin1|173813 vs. uniprot
Match: A0A835Z842_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z842_9STRA) HSP 1 Score: 317 bits (812), Expect = 2.300e-105 Identity = 162/278 (58.27%), Postives = 204/278 (73.38%), Query Frame = 1 Query: 46 NAARLKKFVESQAAELQKGGRLPVSSGGRRYGLVKQKPDNRDYQFVAASR-KSLPAAVDLRTTGCVPPVLDQGSAGTCSAHAAASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMTYDPAKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVLVGFQVYESFESEEVARTGGVPMPAEGEQCLGGHACLLIGYNDATQTFTLLNSWGL-WGQNGFFTLPYAYLTDTELACDFWTASGF 873 N A+ + E A L+ G P++ GR++ L +Q D RD F + + +LP AVDLR TG +PPVLDQG AGTCSAHA+A+AL +LLR+EK+ DF P+RL++YY TRVYVEG+ S+DSGC LRDV KAI YHV +ER+ Y KI+E+P A+AVANARLH T Y AV Q+ ALK ALA+ YPV++G QV+ESFES+ VA+TG VPMP EGEQCLGGHA ++GY+DAT+TFTL+NSW WG +GFFTLPY Y+ D+ LA DFWT F Sbjct: 11 NHAKPVEIAEDDAPALRTG---PLT--GRKFHLKRQSFDRRDIVFSSNVKVATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVADFSPARLYIYYTTRVYVEGIPASDDSGCVLRDVCKAIKKYHVPDERFEPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDAVAQTGVVPMPQEGEQCLGGHAVDVVGYDDATRTFTLMNSWSTQWGDSGFFTLPYEYVLDSNLASDFWTFKLF 283
BLAST of jgi.p|Trimin1|173813 vs. uniprot
Match: A0A836CBQ3_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBQ3_9STRA) HSP 1 Score: 315 bits (808), Expect = 2.380e-104 Identity = 154/251 (61.35%), Postives = 194/251 (77.29%), Query Frame = 1 Query: 127 GRRYGLVKQKPDNRDYQFVAA-SRKSLPAAVDLRTTGCVPPVLDQGSAGTCSAHAAASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMTYDPAKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVLVGFQVYESFESEEVARTGGVPMPAEGEQCLGGHACLLIGYNDATQTFTLLNSWGL-WGQNGFFTLPYAYLTDTELACDFWTASGF 873 GR+Y L Q+PD+RD F + + +P +VDLRT+G +PPVLDQ SAGTCSAHA+A+AL +LL++EK+ DF P+RL++YY TRVYVEG +EDSGC LRDV KAI TYHV +E+Y Y KI+++P A+AVANARLHTT YRAV Q+ LKGALA+G+PV++G QVYESFES+EVA TG VPMP +GE+CLG HA L IG++DAT+ F L+NSWG+ +G GFFTLPY Y+ D LA DFWT F Sbjct: 61 GRKYTLRLQEPDSRDLVFTSTINGADMPLSVDLRTSGFMPPVLDQQSAGTCSAHASANALHYLLKREKVADFSPARLYIYYTTRVYVEGTPATEDSGCVLRDVGKAIKTYHVPDEKYEPYSDKKISQRPSAMAVANARLHTTLKYRAVAQTEHDLKGALAAGFPVMIGIQVYESFESDEVAATGEVPMPEDGEECLGAHATLCIGFDDATRKFKLMNSWGVAFGDKGFFTLPYEYVLDPNLASDFWTFKVF 311
BLAST of jgi.p|Trimin1|173813 vs. uniprot
Match: A0A835YYL4_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYL4_9STRA) HSP 1 Score: 309 bits (791), Expect = 4.630e-102 Identity = 153/250 (61.20%), Postives = 188/250 (75.20%), Query Frame = 1 Query: 130 RRYGLVKQKPDNRDYQFVAASR-KSLPAAVDLRTTGCVPPVLDQGSAGTCSAHAAASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMTYDPAKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVLVGFQVYESFESEEVARTGGVPMPAEGEQCLGGHACLLIGYNDATQTFTLLNSWGL-WGQNGFFTLPYAYLTDTELACDFWTASGF 873 R++ L +Q D RD F + + +LP AVDLR TG +PPVLDQG AGTCSAHA+A+AL +LLR+EK+ DF P+RL++YY TRVYVEG +DSGC LRDV KAI YHV +ERY Y KI+E+P A+AVANARLH T Y AV Q+ ALK ALA+ YPV++G QV+ESFES++VA+TG VPMP EGEQCLGGHA ++GY+D T+TFTL+NSW WG +GFFTLPY Y+ D LA DFWT F Sbjct: 42 RKFHLKRQSFDRRDIVFSSNVKVATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVADFSPARLYIYYTTRVYVEGTPAFDDSGCVLRDVCKAIKKYHVPDERYEPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDKVAQTGVVPMPQEGEQCLGGHAVDVVGYDDVTRTFTLMNSWSTQWGDSGFFTLPYEYVLDPSLASDFWTFQLF 291
BLAST of jgi.p|Trimin1|173813 vs. uniprot
Match: A0A835ZGP7_9STRA (Pept_C1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGP7_9STRA) HSP 1 Score: 265 bits (676), Expect = 7.580e-86 Identity = 128/207 (61.84%), Postives = 153/207 (73.91%), Query Frame = 1 Query: 256 QGSAGTCSAHAAASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMTYDPAKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVLVGFQVYESFESEEVARTGGVPMPAEGEQCLGGHACLLIGYNDATQTFTLLNSWG-LWGQNGFFTLPYAYLTDTELACDFWTASGF 873 QG AGTCSAHAAA+ L +LLRKE + DFPPSRLF+YY RVYVEG +EDSGC LRDV KA+A YH +E+Y Y A+IA++P ALAVANAR H YRAV Q+ + LKGALA+GYPV+VG QVY FES+EVARTG +P E CLGGHA +L Y+D+ + FTL+NSW WG+ GFFTLPY YL D +LA DFW + F Sbjct: 1 QGRAGTCSAHAAANCLHYLLRKEGVADFPPSRLFIYYTARVYVEGTPATEDSGCVLRDVCKAVARYHAPDEKYEPYSDARIAQRPSALAVANARKHCALQYRAVPQTEADLKGALAAGYPVMVGIQVYAGFESDEVARTGEAQLPGPDEACLGGHAVVLTAYDDSLRRFTLMNSWSSAWGRGGFFTLPYDYLLDPQLAGDFWCFTAF 207
BLAST of jgi.p|Trimin1|173813 vs. uniprot
Match: UPI001439CB6C (C1 family peptidase n=1 Tax=Planosporangium thailandense TaxID=765197 RepID=UPI001439CB6C) HSP 1 Score: 234 bits (598), Expect = 2.530e-73 Identity = 129/252 (51.19%), Postives = 160/252 (63.49%), Query Frame = 1 Query: 112 PVSSGGRRYGLVKQKPDNRDYQFVAASR--KSLPAAVDLRTTGCVPPVLDQGSAGTCSAHAAASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMTYDPAKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVLVGFQVYESFESEEVARTGGVPMPAEGEQCLGGHACLLIGYNDATQTFTLLNSWGL-WGQNGFFTLPYAYLTDTELACDFW 858 P +RYG + PD RD+ F A +LP AVDLR C + DQG G+C+A+A A+A F L K+KL DF PSRLF+YY RV +EG S DSG +RD K+++ VC E YD A+ +QPP A + +Y+ + QSLS LKG LA GYP + GF+VYESFESEEVARTG VPMP EQ LGGHA L +GY+DAT F + NSWG WGQ G+FT+PYAYLT+ L+ DFW Sbjct: 4 PTPRSVQRYGWIPDLPDQRDHLFAAPPTVLATLPPAVDLRDQ-CPKEIYDQGQLGSCTANAIAAAFEFGLLKQKLTDFMPSRLFIYYNERV-MEGTVDS-DSGAMIRDGIKSVSKQGVCAETTWPYDIARFTDQPPHSCYQEALGNRVTSYQRIIQSLSQLKGCLAHGYPFVFGFRVYESFESEEVARTGDVPMPQATEQALGGHAVLAVGYDDATARFLVRNSWGTGWGQAGYFTMPYAYLTERGLSSDFW 252
BLAST of jgi.p|Trimin1|173813 vs. uniprot
Match: A0A0M4QQF9_9MICC (Peptidase C1 n=3 Tax=Arthrobacter TaxID=1663 RepID=A0A0M4QQF9_9MICC) HSP 1 Score: 230 bits (586), Expect = 1.450e-71 Identity = 127/250 (50.80%), Postives = 157/250 (62.80%), Query Frame = 1 Query: 133 RYGLVKQKPDNRDYQFVA--ASRKSLPAAVDLRTTGCVPPVLDQGSAGTCSAHAAASALRFLLRKEKLQDFP-PSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMTYDPAKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVLVGFQVYESFESEEVARTGGVPMPAEGEQCLGGHACLLIGYNDATQTFTLLNSWGL-WGQNGFFTLPYAYLTDTELACDFWTASG 870 RYG V PD RD+ F A A + +LP AVDL T C PPV DQG G+C+ + A ++F KEKL D PSRLF+YY RV +EG S D+G +RD K +AT VC+E YD K A +P A A A+ H TY V Q+L+ +KG LASGYPV+ GF VY+SFES +VA TG VPMPA GE LGGH + +GY+DA+ FT+ NSWG WGQ G+ T+PY YL + LA DFWT Sbjct: 7 RYGWVPDLPDQRDFHFAAPMAVQANLPPAVDL-TPAC-PPVYDQGQLGSCTGNGVAGVVQFDALKEKLPDTSTPSRLFIYYNERV-IEGTVAS-DAGAQIRDGIKTVATTGVCDETLWPYDITKFANKPAAACYAAAKAHRAITYSRVGQTLTQMKGCLASGYPVVFGFTVYDSFESAQVASTGVVPMPAAGEGVLGGHCVVAVGYDDASSRFTIRNSWGTGWGQGGYATMPYPYLLSSSLASDFWTVKS 252 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|173813 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9457 ID=mRNA_9457|Name=jgi.p|Trimin1|173813|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=879bp|location=Sequence derived from alignment at Contig_106:24573..25451+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGATCGAGACATGTGGCCCGGTTGTTGACAAGCTGCTGGAGACGAACGCback to top protein sequence of jgi.p|Trimin1|173813 >Trimin1|173813|e_gw1.106.65.1 ID=Trimin1|173813|e_gw1.106.65.1|Name=jgi.p|Trimin1|173813|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=293bp MIETCGPVVDKLLETNAARLKKFVESQAAELQKGGRLPVSSGGRRYGLVKback to top mRNA from alignment at Contig_106:24573..25451+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9457 ID=mRNA_9457|Name=jgi.p|Trimin1|173813|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=879bp|location=Sequence derived from alignment at Contig_106:24573..25451+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_106:24573..25451+ >mRNA_9457 ID=mRNA_9457|Name=jgi.p|Trimin1|173813|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=879bp|location=Sequence derived from alignment at Contig_106:24573..25451+ (Tribonema minus UTEX_B_3156 )back to top |