mRNA_9368 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|168563
Unique NamemRNA_9368
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|168563 vs. uniprot
Match: A0A836CAP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAP5_9STRA)

HSP 1 Score: 699 bits (1805), Expect = 3.300e-255
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 1
Query:    1 MQLQSGDQRKHCELKFVRYEPSRWEDTWREHVSEWSSDELELCRRMVNDIDKVRLWETGAEHSQKGCGLLDPALSHSPHVFSRFVYEDTCTGQTVETYIEPLAGLTRHPRALCMDRFPRRSKNINRGYIVLGQSADACGPCHARARSALRNVPSAAPRRLLVFDLGASLYSSGPGGNSQKWFVESYARHGLPVSEYYAWEAAPLDSAKVWAQIPEWLKPTYHWHNVPADPAPESENNPWDVLRAVAAPEDYVVVKLDIDNTEVEERFMAEMRGDARLRALVDEMFFEHHVNVPIMWRYWGTQGERVYLNDTYAMVQELRSEGIRFHSWP 987
            MQLQSGDQRKHCELKFVRYEPSRWEDTWREHVSEWSSDELELCRRMVNDIDKVRLWETGAEHSQKGCGLLDPALSHSPHVFSRFVYEDTCTGQTVETYIEPLAGLTRHPRALCMDRFPRRSKNINRGYIVLGQSADACGPCHARARSALRNVPSAAPRRLLVFDLGASLYSSGPGGNSQKWFVESYARHGLPVSEYYAWEAAPLDSAKVWAQIPEWLKPTYHWHNVPADPAPESENNPWDVLRAVAAPEDYVVVKLDIDNTEVEERFMAEMRGDARLRALVDEMFFEHHVNVPIMWRYWGTQGERVYLNDTYAMVQELRSEGIRFHSWP
Sbjct:    1 MQLQSGDQRKHCELKFVRYEPSRWEDTWREHVSEWSSDELELCRRMVNDIDKVRLWETGAEHSQKGCGLLDPALSHSPHVFSRFVYEDTCTGQTVETYIEPLAGLTRHPRALCMDRFPRRSKNINRGYIVLGQSADACGPCHARARSALRNVPSAAPRRLLVFDLGASLYSSGPGGNSQKWFVESYARHGLPVSEYYAWEAAPLDSAKVWAQIPEWLKPTYHWHNVPADPAPESENNPWDVLRAVAAPEDYVVVKLDIDNTEVEERFMAEMRGDARLRALVDEMFFEHHVNVPIMWRYWGTQGERVYLNDTYAMVQELRSEGIRFHSWP 329          
BLAST of jgi.p|Trimin1|168563 vs. uniprot
Match: A0A835Z898_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z898_9STRA)

HSP 1 Score: 344 bits (883), Expect = 1.230e-115
Identity = 168/285 (58.95%), Postives = 205/285 (71.93%), Query Frame = 1
Query:  136 MVNDIDKVRLWETGAEHSQ-KGCGLLDPALSHSPHVFSRFVYEDTCTGQTVETYIEPLAGLTRHPRALCMDRFPRRSKNINRGYIVLGQSADACGPCHARARSALRNVPSAAPRRLLVFDLGASLYSSGPGGNSQKWFVESYARHGLPVSEYYAWEAAPLDSAKVWAQIPEWLKPTYHWHNVPADPAPESENNPWDVLRAVAAPEDYVVVKLDIDNTEVEERFMAEMRGDARLRALVDEMFFEHHVNVPIMWRYWGTQGERVYLNDTYAMVQELRSEGIRFHSWP 987
            M +D+  V+ W  GA  SQ  GCG LD +L+    VFSRF++ED CTG+T  TYIEPLAGLTRHP ALC+D+     K  +RGYIVLGQ+++ C   HA    A    P A   R+LVFDLGAS Y++  G +SQ+WFVESYARHG  VSEYYAWEA   D   +WA++P  LKP YHW N+PA P  ES +NPW+ LRA+A P+D+V VKLDIDNT VE  FM ++  D +L+ALVDEMFFEHHVNV  MWRYW TQ E+VYL DTY+M+ +LR +GIRFHSWP
Sbjct:    1 MQSDVKLVKAWSGGAAKSQANGCGHLDASLAREQGVFSRFIFEDQCTGETFTTYIEPLAGLTRHPEALCLDK--NADKLGDRGYIVLGQTSETCA--HALPSRAAFRAPFA---RMLVFDLGASTYTTPVGADSQRWFVESYARHGFAVSEYYAWEAGKHDPVAIWAEVPGDLKPHYHWLNIPATPDAESMDNPWNFLRAIATPDDFVAVKLDIDNTPVETAFMEQLFKDPKLQALVDEMFFEHHVNVENMWRYWKTQKEKVYLKDTYSMILQLRQKGIRFHSWP 278          
BLAST of jgi.p|Trimin1|168563 vs. uniprot
Match: A0A835YJK4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJK4_9STRA)

HSP 1 Score: 333 bits (853), Expect = 2.020e-110
Identity = 169/316 (53.48%), Postives = 211/316 (66.77%), Query Frame = 1
Query:   49 VRYEPSRWEDTWREHVSEWSSDEL--ELCRRMVNDIDKVRLWETGAEHSQK-GCGLLDPALSHSPHVFSRFVYEDTCTGQTVETYIEPLAGLTRHPRALCMDRFPRRSKNINRGYIVLGQSADACGPCHARARSALRNVPSAAPRRLLVFDLGASLYSSGPGGNSQKWFVESYARHGLPVSEYYAWEAAPLDSAKVWAQIPEWLKPTYHWHNVPADPAPESENNPWDVLRAVAAPEDYVVVKLDIDNTEVEERFMAEMRGDARLRALVDEMFFEHHVNVPIMWRYWGTQGERVYLNDTYAMVQELRSEGIRFHSWP 987
            +RYEPS WE  W EHVSEWS       LC RM     +V  W+ G   SQK GCG LD  L     VFSRFVY +TCT +     IEPLAGLTRHPRALC   FP   K I+RGY+VLG+++  C    A   +    VP    +R+L+FDLGAS Y+SG GG SQ+WFV++   HG+   EY+ WEA   D  KVWA++P  LKP YHW N+PA P P+S +NPW+ +R+VA P D+V VKLDIDN+ +E +FM +++ D  L+ L+DEMFFEHHVNV +M+RYW TQ E   L+DTYAMV  LR +G+RFHSWP
Sbjct:   15 LRYEPSAWEQEWIEHVSEWSDPGTGGALCDRMREAHARVAAWDEGVATSQKSGCGALDSRLRDDA-VFSRFVYRNTCTDEEASMAIEPLAGLTRHPRALC---FPGEDKLIDRGYLVLGRTSPKCATRVAEPAALSMAVPD---QRVLLFDLGASKYTSGGGGASQQWFVDTLKLHGVTKLEYWGWEAHGEDPIKVWAELPGDLKPYYHWINIPAHPDPDSSDNPWNFIRSVAKPTDHVFVKLDIDNSPIEFQFMQQLQADPELQLLIDEMFFEHHVNVELMYRYWHTQREAQRLSDTYAMVGGLRRKGMRFHSWP 323          
BLAST of jgi.p|Trimin1|168563 vs. uniprot
Match: A0A835ZBV5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBV5_9STRA)

HSP 1 Score: 321 bits (822), Expect = 6.520e-106
Identity = 160/316 (50.63%), Postives = 212/316 (67.09%), Query Frame = 1
Query:   52 RYEPSRWEDTWREHVSEWSSDEL--ELCRRMVNDIDKVRLWETGAEHSQK-GCGLLDPALSHSPHVFSRFVYEDTCTGQTVETYIEPLAGLTRHPRALCMDRFPRRSKNINRGYIVLGQSADACGPCHARARSALRNVPSAAPRRLLVFDLGASLYSSGPGGNSQKWFVESYARHGLPVSEYYAWEAAPLDSAKVWAQ-IPEWLKPTYHWHNVPADPAPESENNPWDVLRAVAAPEDYVVVKLDIDNTEVEERFMAEMRGDARLRALVDEMFFEHHVNVPIMWRYWGTQGERVYLNDTYAMVQELRSEGIRFHSWP 987
            RYEPS WE  W  HVSEWS       LC +M    + V  W+ G   +Q  GCG LD  L     VFSR+VY++TCT +   T IEPLAGLTRHPRA C DR       ++RGY++LG+++D C    A   +AL  V +   +R+L+FD+GASLYS G GG+SQ+WFV++  +HG+   EY+ WEA  LD+ +VW Q +P+ LKP YHW NVPA+P P+S +NPW+ ++AVA  ED+V VKLDIDN+ +E  F+ +++ D  LR L+DEMFFEHHVNV  M++ W TQGE   L+DTY M+   R +G+RFHSWP
Sbjct:    1 RYEPSEWEQEWSNHVSEWSDPGTGKRLCAKMKEREEYVAAWDKGVAQAQADGCGALDTRLRDQA-VFSRYVYKNTCTEEEASTVIEPLAGLTRHPRANCFDR----QHLVDRGYLLLGRTSDRCRTRMAEP-AALSMVRAVEDQRVLLFDMGASLYSDGKGGSSQQWFVDTLKKHGVHRLEYWGWEAEALDTVEVWKQQVPDDLKPFYHWINVPANPDPKSGDNPWNFIKAVARMEDHVFVKLDIDNSPIELAFIEQLQRDPELRLLIDEMFFEHHVNVEAMYKSWKTQGETQRLSDTYKMIGGFRRQGLRFHSWP 310          
BLAST of jgi.p|Trimin1|168563 vs. uniprot
Match: A0A835YZ26_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ26_9STRA)

HSP 1 Score: 301 bits (772), Expect = 2.130e-98
Identity = 156/319 (48.90%), Postives = 199/319 (62.38%), Query Frame = 1
Query:   40 LKFVRYEPSRWEDTWREHVSEWSSDELE--LCRRMVNDIDKVRLWETGAEHSQK-GCGLLDPALSHSPHVFSRFVYEDTCTGQTVETYIEPLAGLTRHPRALCMDRFPRRSKNINRGYIVLGQSADACGPCHARARSALRNVPSAAPRRLLVFDLGASLYSSGPGGNSQKWFVESYARHGLPVSEYYAWEAAPLDSAKVWAQIPEWLKPTYHWHNVPADPAPESENNPWDVLRAVAAPEDYVVVKLDIDNTEVEERFMAEMRGDARLRALVDEMFFEHHVNVPIMWRYWGTQGERVYLNDTYAMVQELRSEGIRFHSWP 987
            +   RYEPS+WE  W  H++EWS       LC +M      VR W+ GA  SQ+ GCG LD  L  +  VFSRFVY DTCTG+     IEPLAGLTRHPRA+C           +RGY+VLG+++  C    A         P+A   R+L+FD+GASL+SSG GG SQ+WFV++   HG+   EY+ WEA   D   VWA+IP  LKP YHW N+PA P   S +NPW+ ++A A   D+V VKLDIDN+ +E  FM +++ D  L+ L+DEMFFEHHVNV  M +YW T  E + L DTY +V  LR  G+RFHSWP
Sbjct:    1 MSLTRYEPSKWEQEWMGHITEWSDPGTGDMLCLKMREQEVHVRAWDEGALMSQRDGCGALDSRLRDTS-VFSRFVYRDTCTGKEASMAIEPLAGLTRHPRAVCYTT----DVLTDRGYLVLGRTSPMCKTHMAE--------PAALSMRVLLFDMGASLFSSGYGGASQQWFVDTLKLHGVSRLEYWGWEAHTEDPTAVWAEIPGDLKPFYHWMNIPAIPDHLSSDNPWNFIKATAKRTDHVFVKLDIDNSPIELEFMQQLQADPELQVLIDEMFFEHHVNVEPMNQYWNTHNEPMKLRDTYEIVGGLRRSGMRFHSWP 306          
BLAST of jgi.p|Trimin1|168563 vs. uniprot
Match: A0A7J7IND6_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IND6_9RHOD)

HSP 1 Score: 187 bits (474), Expect = 2.900e-53
Identity = 112/321 (34.89%), Postives = 167/321 (52.02%), Query Frame = 1
Query:   28 KHCELKFVRYEPSRWEDTWREHVSEWSSDELELCRRMVNDIDKVRLWETGAEHSQ-KGCGLLDPALSHSPHVFSRFVYEDTCTG-QTVETYIEPLAGLTRHPRALCMDRFPRRSKNINRGYIVLGQSADACGPCHARARSALRNVPSAAPRRLLVFDLGASLYSSGPGGNSQKWFVESYARHGLPVSEYYAWEAAPLDSAKVWAQIPEWLKPTYHWHNVPADPAPESENNPWDVLRAVAAPEDYVVVKLDIDNTEVEERFMAEMRGDARLRALVDEMFFEHHVNVPIMWRYWGTQGERVYLNDTYAMVQELRSEGIRFHSW 984
            K C  +FV Y PS  E TW  H  +W     E C+ +    + V  W    ++ + +    + PA        SRF Y + C   + +   IEPL G  R+P  +C     +    ++R YI +     A     AR RS         PR+   FDLGAS ++SG G  SQ W V  Y R G+     +AWE+   +  +VW QIPE   P YHW N+PA+    S  NP ++L  VA+ ED+VV+K+DIDN+ VE RF++++R +  L++L+DEM+FE H  +  + ++WG+Q   +   D   ++ +LR+ GIR H W
Sbjct:   36 KSCGWEFVSYVPSSLERTWLVHADDWGE---EPCQHVAQFSELVASWLEFIKNPKIRSKEYIVPAA------MSRFTYRNVCDPREKIVVPIEPLFGPLRNPE-IC-----KGVDFVDRSYIYIDWQLPAA---FARQRSHQ-------PRKSHYFDLGASTWTSGAGAASQNWIVHEYERRGIFFDGIWAWESTVYEPNQVWDQIPERYVPAYHWFNIPAEADEHSRWNPLNILARVASKEDFVVLKIDIDNSTVENRFLSQIRSNKTLQSLIDEMYFEPHFKMNPLQQFWGSQ--TIPFKDVITLLSDLRTAGIRIHGW 329          
BLAST of jgi.p|Trimin1|168563 vs. uniprot
Match: A0A7S0MTF5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MTF5_9CRYP)

HSP 1 Score: 165 bits (418), Expect = 4.400e-45
Identity = 97/248 (39.11%), Postives = 134/248 (54.03%), Query Frame = 1
Query:   34 CELKFVRYEPSRWEDTWREHVSEWSSDELELCRRMVNDIDKVRLWETGAEHSQKGCGLLDPALSHSPHVFSRFVYEDTCTGQTVETYIEPLAGLTRHPRALCMDRFPRRSKNINRGYIVLGQSADACGPCHARARSALRNVPSAAPRRLLVFDLGASLYSSGPGGNSQKWFVESYARHGLPVSEYYAWEAAPLDSAKVWAQIPEWLKPTYHWHNVPADPAPESENNPWDVLRAVAAPEDYVVVKLDID 777
            C  KFV++ PS +E  W ++V    +D   +C      I +V  W   AE S +       AL  S  VFS+FV+E+TCTG+ V  YIEPLAGLTR P   C+   P     + + Y+V+  +              +   P+  P+  L FDLGAS Y++G GG SQ WFVESY   G+     YAWE        VW+ IP  LKP YHW+N+P +P P   +N  + ++ +A PED+VV+K+DID
Sbjct:   96 CHWKFVQFYPSAYEKYWTDNVVTLQND---VCAESNKQILEVEEWMAHAEASAQK----QEALPES--VFSKFVFENTCTGEIVTDYIEPLAGLTRSP-FFCLKGEPFL---VQKDYLVISWNVS----------KKVAVSPAYTPKSYL-FDLGASTYNNGAGGASQSWFVESYEARGVRWDGIYAWEVTEHPPPNVWSIIPPHLKPIYHWYNIPVNPEPNHPDNAMEYIKRIARPEDFVVLKIDID 319          
BLAST of jgi.p|Trimin1|168563 vs. uniprot
Match: M2XLR6_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XLR6_GALSU)

HSP 1 Score: 163 bits (412), Expect = 1.980e-44
Identity = 104/319 (32.60%), Postives = 150/319 (47.02%), Query Frame = 1
Query:   34 CELKFVRYEPSRWEDTWREHVSEWSSDELELCRRMVNDIDKVRLWETGAEHSQKGCGLLDPALSHSPHVFSRFVYEDTCT-GQTVETYIEPLAGLTRHPRALCMDRFPRRSKNINRGYIVLG-QSADACGPCHARARSALRNVPSAAPRRLLVFDLGASLYSSGPGGNSQKWFVESYARHGLPVSEYYAWEAAPLDSAKVWAQIPEWLKPTYHWHNVPADPAPESENNPWDVLRAVAAPEDYVVVKLDIDNTEVEERFMAEMRGDARLRALVDEMFFEHHVNVPIMWRYWGTQGERVYLNDTYAMVQELRSEGIRFHSW 984
            C  +FV Y  S  E  W  H +EW     + C       D    W    + S      ++  +   P   SRF+++ TC+   T+   IEPL G  RHP  +C       +  ++R YI +  Q   A     ARA                 FD+GAS + +GPG  SQ W V  + + G+     +AWE+    S +VW QIP    P YHW N+PA+    S  NP ++L  VA+ ED+VV+K+DID+   E +FM ++R +  L+ L+DEMFFE H  +  +   WG Q       +   +  +LR  GIR H W
Sbjct:   10 CPWEFVSYRASPIEQAWLTHAAEWGE---KPCDYSTEFSDYFLPWLDFIKSSTNK--TIEVPV---PSAMSRFLFKSTCSPSDTLVVPIEPLFGPLRHP-LIC-----NGTDVVDRSYIYIDWQIPLALQSSRARAH---------------YFDIGASTWETGPGAASQNWIVNEFEKRGISFDGIWAWESKFYQSKEVWEQIPAKYLPVYHWFNIPAETDNSSLFNPLNILAQVASEEDFVVLKIDIDDAITENKFMDQIRTNTTLQHLIDEMFFEPHFKMDPLQNSWGPQ--TTTFEEVITLFTDLRHAGIRIHGW 297          
BLAST of jgi.p|Trimin1|168563 vs. uniprot
Match: A0A7S4CA73_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CA73_9EUGL)

HSP 1 Score: 164 bits (415), Expect = 1.010e-43
Identity = 94/294 (31.97%), Postives = 140/294 (47.62%), Query Frame = 1
Query:   34 CELKFVRYEPSRWEDTWREHVSEWSSDE-----LELCRRMVNDIDKVRLWETGAEHSQKGCGLLDPALSHSPHVFSRFVYEDTCTGQTVETYIEPLAGLTRHPRALCMDRFPRRSKNINRGYIVLGQSADACGPCHARARSALRNVPSAAPRRLLVFDLGASLYSSGPGGNSQKWFVESYARHGLPVSEYYAWEAAPLDSAKVWAQIPEWLKPTYHWHNVPADPAPESENNPWDVLRAVAAPEDYVVVKLDIDNTEVEERFMAEMRGDARLRALVDEMFFEHHV-NVPIMWRYW 897
            C+  FV YEPS WE  W ++      D         C  +  ++  +  W  G   S++        L   P ++SRF YED CT +     IEPL    RHP+A C    P   K+    ++VL   +                     P R   FDLGAS+Y+ G GG S +WFVE Y  +G+      AWEA P  ++K W  +P  +KP   + N+P    P S +NP   +  +  PED+V++K+DID++  E+  + ++     L  L+DE+F+EHHV N P++   W
Sbjct:  117 CQKVFVSYEPSAWEADWVKNAGARMWDPRNPHWTNACTNVRANVGTIDQWIRGIAQSRRE----GKPLEAKPGIYSRFTYEDACTKEVSHVAIEPLVAALRHPKAWCYGTDPIFLKD----WLVLPYKSQLD------------------PGRTFYFDLGASVYNQGLGGASMQWFVEEYRHNGVDFDRILAWEATPTAASKFWNAVPADVKPHMQYFNIPVTSTPGSADNPLGYITKLTRPEDFVMLKIDIDHSPTEQALVEQILASKELCLLIDEIFWEHHVLNSPMVQNGW 384          
BLAST of jgi.p|Trimin1|168563 vs. uniprot
Match: A0A2V0P754_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P754_9CHLO)

HSP 1 Score: 160 bits (404), Expect = 3.170e-42
Identity = 108/332 (32.53%), Postives = 153/332 (46.08%), Query Frame = 1
Query:   34 CELKFVRYEPSRWEDTWREHVSEWSSDELELCRRM--VNDIDKVRLWETGAEHSQKGCGLLDPALSHSPHVFSRFVYEDTC---TGQTVETYIEPLAGLTRHPRALCMDR-------FPRRSKNI--NRGYIVLGQSADACGPCHARARSALRNVPSAAPRRLLVFDLGASLYSSGPGGNSQKWFVESYARHGLPVSEYYAWEAAPLDSAKVWAQIPEWLKPTYHWHNVPADPAPESENNPWDVLRAVAAPEDYVVVKLDIDNTEVEERFMAEMRGDARLRALVDEMFFEHHVNVPIMWRYWG-TQGERVYLNDTYAMVQELRSEGIRFHSW 984
            CE   V YE S +E TW ++ + WS D    C+        + +  W  G   + K        L   P VFS+FV    C   T      +IEPLA   RHP   C          +  R   +  NR Y++L           AR     R        ++  FDLGA+ Y        Q WFV SYA  GLP    + WEA  +  A+++ ++P+ L   Y + N+PA    +  ++  ++L+++A P D+VV KLDID   VE   +  +  D     LVDE FFEHHVN P M  YWG T  E + L ++  +  E+R +G+R HSW
Sbjct:   78 CESSTV-YESSEYESTWLKNAAAWSKD---FCKHADTPEQNELMEKWLNGIASANKKPAEAPAGLD--PSVFSKFVTTVKCDDGTSSEHTDWIEPLAHGLRHPYNFCSQNKFAPSEVYTDRVVAVIYNRTYLLLANRQGVDSVRGARGDCERREC------QVFFFDLGATAYRQSDKEPGQSWFVRSYAAAGLPFDRMFEWEARAMSPAEIFNEVPKELLKVYSYFNIPATTDTKDPSHAVNILKSLAKPGDFVVFKLDIDAAAVEIPILKALTEDPEAVKLVDEFFFEHHVNFPPMRPYWGGTLDEGIGLAESMQLFLEIRKKGVRAHSW 397          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168563 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CAP5_9STRA3.300e-255100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z898_9STRA1.230e-11558.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YJK4_9STRA2.020e-11053.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZBV5_9STRA6.520e-10650.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZ26_9STRA2.130e-9848.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7J7IND6_9RHOD2.900e-5334.89Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A7S0MTF5_9CRYP4.400e-4539.11Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
M2XLR6_GALSU1.980e-4432.60Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S4CA73_9EUGL1.010e-4331.97Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A2V0P754_9CHLO3.170e-4232.53Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_58contigContig_58:126163..129103 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|168563|e_gw1.58.68.1
Max annot lvl2759|Eukaryota
EggNOG OGs2E1YJ@1|root,2S980@2759|Eukaryota
Evalue3.24e-45
Seed ortholog130081.XP_005707652.1
Hectar predicted targeting categoryother localisation
TranscriptId168885
TrackFilteredModels1
ProteinId168563
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168563gene_9368Tribonema minus UTEX_B_3156 geneContig_58 126163..129103 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168563Trimin1|168563|e_gw1.58.68.1Tribonema minus UTEX_B_3156 polypeptideContig_58 126163..129103 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9368_4exon_9368_4Tribonema minus UTEX_B_3156 exonContig_58 126163..126204 -
exon_9368_3exon_9368_3Tribonema minus UTEX_B_3156 exonContig_58 126871..127508 -
exon_9368_2exon_9368_2Tribonema minus UTEX_B_3156 exonContig_58 128280..128433 -
exon_9368_1exon_9368_1Tribonema minus UTEX_B_3156 exonContig_58 128948..129103 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9368CDS_9368Tribonema minus UTEX_B_3156 CDSContig_58 128948..129103 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9368 ID=mRNA_9368|Name=jgi.p|Trimin1|168563|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=990bp|location=Sequence derived from alignment at Contig_58:126163..129103- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGCTGCAAAGTGGCGATCAGCGCAAGCATTGTGAGCTGAAGTTTGT
CAGGTACGAGCCCAGTCGATGGGAAGATACGTGGAGGGAGCATGTCAGTG
AGTGGAGCTCCGACGAGCTGGAGCTTTGCAGGCGCATGGTGAATGACATC
GACAAGGTGCGGCTCTGGGAGACTGGAGCGGAGCATTCCCAGAAGGGGTG
CGGCCTGCTGGACCCAGCGCTGTCGCACTCGCCTCACGTGTTCTCCAGGT
TTGTATACGAGGACACGTGCACAGGCCAGACAGTGGAGACATACATTGAG
CCCCTGGCAGGCCTGACGCGGCACCCGCGCGCCCTCTGCATGGACCGCTT
CCCACGGCGCAGCAAGAACATCAACCGCGGCTACATCGTGCTGGGGCAGA
GCGCGGACGCGTGCGGACCGTGCCACGCGCGCGCGAGGAGCGCTCTGCGG
AACGTTCCCAGCGCCGCGCCGCGCCGCCTCCTCGTTTTTGACCTCGGCGC
GAGCCTCTACTCCAGCGGCCCCGGCGGCAACAGCCAGAAGTGGTTCGTGG
AGTCGTACGCGCGGCACGGCCTCCCAGTGAGCGAGTACTACGCTTGGGAG
GCGGCGCCGCTCGACAGCGCCAAGGTGTGGGCGCAGATTCCGGAGTGGCT
CAAGCCCACGTACCACTGGCACAACGTGCCTGCGGATCCGGCGCCGGAGT
CGGAGAACAATCCGTGGGACGTTCTGCGTGCCGTCGCCGCGCCCGAGGAC
TACGTCGTGGTGAAGCTCGACATTGACAACACGGAGGTGGAGGAGCGGTT
CATGGCGGAGATGCGCGGGGATGCAAGGCTGCGCGCGCTGGTGGACGAGA
TGTTCTTTGAGCACCACGTGAACGTGCCCATCATGTGGCGCTACTGGGGG
ACGCAGGGCGAGCGCGTGTACCTCAACGACACGTACGCCATGGTGCAGGA
GCTGCGCAGTGAAGGCATCCGCTTCCACAGCTGGCCCTGA
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protein sequence of jgi.p|Trimin1|168563

>Trimin1|168563|e_gw1.58.68.1 ID=Trimin1|168563|e_gw1.58.68.1|Name=jgi.p|Trimin1|168563|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=330bp
MQLQSGDQRKHCELKFVRYEPSRWEDTWREHVSEWSSDELELCRRMVNDI
DKVRLWETGAEHSQKGCGLLDPALSHSPHVFSRFVYEDTCTGQTVETYIE
PLAGLTRHPRALCMDRFPRRSKNINRGYIVLGQSADACGPCHARARSALR
NVPSAAPRRLLVFDLGASLYSSGPGGNSQKWFVESYARHGLPVSEYYAWE
AAPLDSAKVWAQIPEWLKPTYHWHNVPADPAPESENNPWDVLRAVAAPED
YVVVKLDIDNTEVEERFMAEMRGDARLRALVDEMFFEHHVNVPIMWRYWG
TQGERVYLNDTYAMVQELRSEGIRFHSWP*
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mRNA from alignment at Contig_58:126163..129103-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9368 ID=mRNA_9368|Name=jgi.p|Trimin1|168563|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2941bp|location=Sequence derived from alignment at Contig_58:126163..129103- (Tribonema minus UTEX_B_3156 )
ATGCAGCTGCAAAGTGGCGATCAGCGCAAGCATTGTGAGCTGAAGTTTGT CAGGTACGAGCCCAGTCGATGGGAAGATACGTGGAGGGAGCATGTCAGTG AGTGGAGCTCCGACGAGCTGGAGCTTTGCAGGCGCATGGTGAATGACATC GACAAGGTGAGAACCATCAGCTTTTGTGCATAATCACCGACGCTCGACGT CGACTGGAGATAATACAGCAGTCCAAAACCTTGCACGTTTATACCTGAAT CATCATGATGCAACTGCTACTGCAGAGTGCCTGAGGCAGCTCGCGGTACT CAGCCAGTGGATTGTTGTGAGGCGTGTTACTGAGCCAGCTTGTGCTGGTC ATGCGCCTACTGCCTTCTGCACTGTAGGTGTGCCCGGGCAGGCCATCACG GCAAGCCTGCTCAAGTAGAAATTGTAACGTGCGCCATGTCGTACGCCATC AGTGAGAAATCTGATGGAAAGCAAAAGCGAGGCACTCGCAGCAGCTTTCA CTGCCACCACCAAGTCTGCTGCTGGGTGTGCCAAACTTCATGTGCAGCCC CATACCTCACGAGCATGTCCATGCCTCTTTGCACTGCTGCCGCTCAGCCA ACTGCTGCCGTCCTGTGCTGATCATGCTGCTACTGCTGCGCTTCCCGACC CGTAAACCCCCCTGCTGCAGGTGCGGCTCTGGGAGACTGGAGCGGAGCAT TCCCAGAAGGGGTGCGGCCTGCTGGACCCAGCGCTGTCGCACTCGCCTCA CGTGTTCTCCAGGTTTGTATACGAGGACACGTGCACAGGCCAGACAGTGG AGACATACATTGAGCCCCTGGCAGGTGCGACCAGGCTTTCGTATTGATGT GACCAGACGTGACTTGGCGTTGAGGCTGGTGTTGCGGCGCGTGCGCAAGG CGGATGTCGCAGTCATGTTTGCGCCTCTGCCAGGTGAGTTGAGAGTTCCG CGTGACCAGCACAGTTGAAGCCTTGCATAGGAATTTGAAAAGCGCGCGGG GCAGCGGCGGGGCTGCAGGCCCTCAAGACCGTCAATCTTTTAAAAACAAA GCCATGCGCTACAATGGCCCTATTTGCGAGATTTCAACGTGCCAACCACC ACGAACGATTGGAAATCTTCTCTATAGAACCCAGATCTAGCTGCTTCAAA TTGGTTGCCGTTGCCTGCGCCATCAGGTCTACGATAACCAAAATGTGGGC AGTCAATTGCATCCCTACTATGTATTGGCTGCATGCATGCGTCCACAGAG TAGCCAGATCCTAGCTTTGTTCGCCAAAGCACGCCATGCAAAACTCAGCC AGTGCATGCACAGTCAAGACGCTGGCAGCTGAAGCCAGGGTTTTATGTAC CTGACGTCCAGATGAGGCTACATACTTGAACTCTGCAAAGAACTGGGTGA TCAGCTGGTCACGTGAACACACTTACTGCGATGGGAGCAAACATTTCATG CATCAAGACATGCATCTGGCCGATTTCAATCTCAATCAGGTCCACTTTCG TGCTTTCACTGTGCTTGAAGGCAACCCCACAGTACTGCCAGCACGACACG CCTTAACTTCAACTTCTGTGTACCCCCCACCCCCGCCTCCTGCAGGCCTG ACGCGGCACCCGCGCGCCCTCTGCATGGACCGCTTCCCACGGCGCAGCAA GAACATCAACCGCGGCTACATCGTGCTGGGGCAGAGCGCGGACGCGTGCG GACCGTGCCACGCGCGCGCGAGGAGCGCTCTGCGGAACGTTCCCAGCGCC GCGCCGCGCCGCCTCCTCGTTTTTGACCTCGGCGCGAGCCTCTACTCCAG CGGCCCCGGCGGCAACAGCCAGAAGTGGTTCGTGGAGTCGTACGCGCGGC ACGGCCTCCCAGTGAGCGAGTACTACGCTTGGGAGGCGGCGCCGCTCGAC AGCGCCAAGGTGTGGGCGCAGATTCCGGAGTGGCTCAAGCCCACGTACCA CTGGCACAACGTGCCTGCGGATCCGGCGCCGGAGTCGGAGAACAATCCGT GGGACGTTCTGCGTGCCGTCGCCGCGCCCGAGGACTACGTCGTGGTGAAG CTCGACATTGACAACACGGAGGTGGAGGAGCGGTTCATGGCGGAGATGCG CGGGGATGCAAGGCTGCGCGCGCTGGTGGACGAGATGTTCTTTGAGCACC ACGTGAACGTGCCCATCATGTGGCGCTACTGGGGGACGCAGGGCGAGCGC GTGTACCTCAACGACACGTACGCCATGGTGCAGGTGCGTCAGCGCGCAGC AGCGGTCAAATTTTGGTTTATAAATAAAAAGTTAGAAGGTAATTTTCCCA CACTGAGAAAACAATGGAAAATAGCCCATCCAAAACTTGTGTCAGCGTAG CTCAGTGTGTAGTGATGTGCCCATCATCTGGCGCTGTATGGGACACTCTG CAATGAATGACGTCTGGTGTGGCGTTTAGCGTAGCGTACTGTGGCACAGT GGCAACTGTATGGCACAATCGTGTGGCGCTACTGGAACTCAAACAGAAAG AGCCTTTGTGTCTGAACCACGCATACGCAATGCTTAGGAATGTGGCTGTG TTTTGCTAGCTGCCGGACGGCCTTGATCTGGCTGTTTTGGCGAGCTGTTG TTGATAGCCTCGCCGACACTATTATGCAGCCTGGTCTGTACTGAATGCCT CTTGCAGCCTCGTCCTTACGGCCCTGCGACATGCGCATCACATGTATGCC TGCACATCGTGCTCCGGTGTGGTCACAATCGACCACCCTCAGCAGACGAC AGCCACCATACAATAACGTCAGACGAGCGCATACATACCCGCACACGTTG TGTTGCGCTCCTGCGCACGTCTCAGCAGCATGCAGCCGCTGCCATCCTGC AGCGCTGACGCTCACGCCGTTGCACCCGCCTCCTGCTTCCGCGTCACAGG AGCTGCGCAGTGAAGGCATCCGCTTCCACAGCTGGCCCTGA
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Coding sequence (CDS) from alignment at Contig_58:126163..129103-

>mRNA_9368 ID=mRNA_9368|Name=jgi.p|Trimin1|168563|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=990bp|location=Sequence derived from alignment at Contig_58:126163..129103- (Tribonema minus UTEX_B_3156 )
ATGCAGCTGCAAAGTGGCGATCAGCGCAAGCATTGTGAGCTGAAGTTTGT
CAGGTACGAGCCCAGTCGATGGGAAGATACGTGGAGGGAGCATGTCAGTG
AGTGGAGCTCCGACGAGCTGGAGCTTTGCAGGCGCATGGTGAATGACATC
GACAAGGTGCGGCTCTGGGAGACTGGAGCGGAGCATTCCCAGAAGGGGTG
CGGCCTGCTGGACCCAGCGCTGTCGCACTCGCCTCACGTGTTCTCCAGGT
TTGTATACGAGGACACGTGCACAGGCCAGACAGTGGAGACATACATTGAG
CCCCTGGCAGGCCTGACGCGGCACCCGCGCGCCCTCTGCATGGACCGCTT
CCCACGGCGCAGCAAGAACATCAACCGCGGCTACATCGTGCTGGGGCAGA
GCGCGGACGCGTGCGGACCGTGCCACGCGCGCGCGAGGAGCGCTCTGCGG
AACGTTCCCAGCGCCGCGCCGCGCCGCCTCCTCGTTTTTGACCTCGGCGC
GAGCCTCTACTCCAGCGGCCCCGGCGGCAACAGCCAGAAGTGGTTCGTGG
AGTCGTACGCGCGGCACGGCCTCCCAGTGAGCGAGTACTACGCTTGGGAG
GCGGCGCCGCTCGACAGCGCCAAGGTGTGGGCGCAGATTCCGGAGTGGCT
CAAGCCCACGTACCACTGGCACAACGTGCCTGCGGATCCGGCGCCGGAGT
CGGAGAACAATCCGTGGGACGTTCTGCGTGCCGTCGCCGCGCCCGAGGAC
TACGTCGTGGTGAAGCTCGACATTGACAACACGGAGGTGGAGGAGCGGTT
CATGGCGGAGATGCGCGGGGATGCAAGGCTGCGCGCGCTGGTGGACGAGA
TGTTCTTTGAGCACCACGTGAACGTGCCCATCATGTGGCGCTACTGGGGG
ACGCAGGGCGAGCGCGTGTACCTCAACGACACGTACGCCATGGTGCAGGA
GCTGCGCAGTGAAGGCATCCGCTTCCACAGCTGGCCCTGA
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