mRNA_9219 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|349234 vs. uniprot
Match: A0A836CDC0_9STRA (ABC transporter transmembrane region 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDC0_9STRA) HSP 1 Score: 1429 bits (3700), Expect = 0.000e+0 Identity = 840/840 (100.00%), Postives = 840/840 (100.00%), Query Frame = 1 Query: 175 MMRSAWLAQELLSTFEKEIGEVALQPSPVSGTFRIAANGIEVWERKKDGGFPEAKVLKQRVRNVIVPTKDLAIASQQQVYSKQADTVAVHSSRGEAACAMHLPTYNRLQASNAEDTRNANAADGDVKQEQQQWGTWRHAYEASRICFWHGLLRDRRWCLPLLLVTLAITYEVAASFIMTVIGDFYLAVSSQDWQLFMNVLWRSMLVVAVVGTLRACRDFACEACALQWRCNLVRYLHAHYLRGTVPYQLTRAGXXXXXXXXXXXXXXXXVDNPDQRIVSDAAALTTAMGEVIQKTLVVPGLLAYYTWYVAALFGWVAPAACYAYFALAGALNAVVLRRVVPRVYEAERREGTFRYAHAWLRANAEAVAFYGAAAAARAERHRLGYYFNSAVDARWRVLWAHLPLYACVQFFDYVGSIVNYAAVGISIFYLTKAHAASEAEISSLLARGSYSCLYIINAFSMGLDASASLTVVRASAGRVMELLCGAGFTAAASAKLSPYDRPELDIPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAXXXXXXXXXXXXALLTLRNVTVARPSAGGCAGGDSAWFRNGTEXXXXXXXXXXGNLITDLSLSVAEGEHVLICGASGCGKTSLLRVVAGLWEPRGGTVRHCGSSGXXXXXXAQNWSGGARGDGGGEYECERIMFLPQKPYTFVGTLADQVVYPREWRDAAVACAAGRARVADILQQLRLSHLLRYGGXXXXXXXXXSAGLERVADWPNVLSPGEAQRLALARALYHRPRLLLLDEATSALGEDAEADAMARLRAAGATLVSAGHRATLRRFHARALVLAGDAAGSWGVADL 2694 MMRSAWLAQELLSTFEKEIGEVALQPSPVSGTFRIAANGIEVWERKKDGGFPEAKVLKQRVRNVIVPTKDLAIASQQQVYSKQADTVAVHSSRGEAACAMHLPTYNRLQASNAEDTRNANAADGDVKQEQQQWGTWRHAYEASRICFWHGLLRDRRWCLPLLLVTLAITYEVAASFIMTVIGDFYLAVSSQDWQLFMNVLWRSMLVVAVVGTLRACRDFACEACALQWRCNLVRYLHAHYLRGTVPYQLTRAGXXXXXXXXXXXXXXXXVDNPDQRIVSDAAALTTAMGEVIQKTLVVPGLLAYYTWYVAALFGWVAPAACYAYFALAGALNAVVLRRVVPRVYEAERREGTFRYAHAWLRANAEAVAFYGAAAAARAERHRLGYYFNSAVDARWRVLWAHLPLYACVQFFDYVGSIVNYAAVGISIFYLTKAHAASEAEISSLLARGSYSCLYIINAFSMGLDASASLTVVRASAGRVMELLCGAGFTAAASAKLSPYDRPELDIPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAXXXXXXXXXXXXALLTLRNVTVARPSAGGCAGGDSAWFRNGTEXXXXXXXXXXGNLITDLSLSVAEGEHVLICGASGCGKTSLLRVVAGLWEPRGGTVRHCGSSGXXXXXXAQNWSGGARGDGGGEYECERIMFLPQKPYTFVGTLADQVVYPREWRDAAVACAAGRARVADILQQLRLSHLLRYGGXXXXXXXXXSAGLERVADWPNVLSPGEAQRLALARALYHRPRLLLLDEATSALGEDAEADAMARLRAAGATLVSAGHRATLRRFHARALVLAGDAAGSWGVADL Sbjct: 1 MMRSAWLAQELLSTFEKEIGEVALQPSPVSGTFRIAANGIEVWERKKDGGFPEAKVLKQRVRNVIVPTKDLAIASQQQVYSKQADTVAVHSSRGEAACAMHLPTYNRLQASNAEDTRNANAADGDVKQEQQQWGTWRHAYEASRICFWHGLLRDRRWCLPLLLVTLAITYEVAASFIMTVIGDFYLAVSSQDWQLFMNVLWRSMLVVAVVGTLRACRDFACEACALQWRCNLVRYLHAHYLRGTVPYQLTRAGXXXXXXXXXXXXXXXXVDNPDQRIVSDAAALTTAMGEVIQKTLVVPGLLAYYTWYVAALFGWVAPAACYAYFALAGALNAVVLRRVVPRVYEAERREGTFRYAHAWLRANAEAVAFYGAAAAARAERHRLGYYFNSAVDARWRVLWAHLPLYACVQFFDYVGSIVNYAAVGISIFYLTKAHAASEAEISSLLARGSYSCLYIINAFSMGLDASASLTVVRASAGRVMELLCGAGFTAAASAKLSPYDRPELDIPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAXXXXXXXXXXXXALLTLRNVTVARPSAGGCAGGDSAWFRNGTEXXXXXXXXXXGNLITDLSLSVAEGEHVLICGASGCGKTSLLRVVAGLWEPRGGTVRHCGSSGXXXXXXAQNWSGGARGDGGGEYECERIMFLPQKPYTFVGTLADQVVYPREWRDAAVACAAGRARVADILQQLRLSHLLRYGGXXXXXXXXXSAGLERVADWPNVLSPGEAQRLALARALYHRPRLLLLDEATSALGEDAEADAMARLRAAGATLVSAGHRATLRRFHARALVLAGDAAGSWGVADL 840
BLAST of jgi.p|Trimin1|349234 vs. uniprot
Match: D7FQX4_ECTSI (ATP-binding cassette, sub-family D, member 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX4_ECTSI) HSP 1 Score: 325 bits (834), Expect = 1.000e-91 Identity = 186/384 (48.44%), Postives = 236/384 (61.46%), Query Frame = 1 Query: 604 RICFWHGLLRDRRWCLPLLLVTLAITYEVAASFIMTVIGDFYLAVSSQDWQLFMNVLWRSMLVVAVVGTLRACRDFACEACALQWRCNLVRYLHAHYLRGTVPYQL----------------------------TRAGXXXXXXXXXXXXXXXXVDNPDQRIVSDAAALTTAMGEVIQKTLVVPGLLAYYTWYVAALFGWVAPAACYAYFALAGALNAVVLRRVVPRVYEAERREGTFRYAHAWLRANAEAVAFYGAAAAARAERHRLGYYFNSAVDARWRVLWAHLPLYACVQFFDYVGSIVNYAAVGISIFYLTKAHAASEAEISSLLARGSYSCLYIINAFSMGLDASASLTVVRASAGRVMELLCGAGFTAAASAKLSPY 1671 R+ GL +RRW PL+L A YEV A+ I+ VI DFYLA+S+ D QLF+ VLWRS+LVV VV L+A RD A EACAL WR LV +LH+ YLRG +PY L TR G +DNPDQR+ +DA AL A V+ +TLV PGL+A+YTWY+ +FGWVAP ACY YF +A A+N V++ VVP VY ++ EGTFRY HAWLR ++E+V F G A ER RLG FN+ V A W V+ H+PLY QFFDY+GSIVNYAAVG +I YL+KA EAEI++L+ARGS+SCLY+I+AFS L AS + + + SA RV ELL G + + + P+ Sbjct: 108 RVFLLRGLFVERRWVFPLILTVTATAYEVCAASILNVISDFYLAISTLDAQLFVQVLWRSLLVVTVVAALKAGRDLAKEACALVWRQRLVLFLHSWYLRGKMPYVLSTGEAGRDKRGGASFGNVGAPGRVDGGCTRGGGNGVAAGGESPL----IDNPDQRVTADAEALVAAFATVLHETLVAPGLVAFYTWYLVGMFGWVAPVACYVYFIVASAINWAVVKTVVPAVYWKDKAEGTFRYDHAWLRTHSESVVFCGVGAVEGRERDRLGESFNAVVTAWWEVIRRHVPLYLFTQFFDYLGSIVNYAAVGGAILYLSKAEGMGEAEIAALVARGSFSCLYLIDAFSKALRASEAASRMGGSARRVAELLRATGLSDSDARAFGPW 487
BLAST of jgi.p|Trimin1|349234 vs. uniprot
Match: UPI001BB25880 (lysosomal cobalamin transporter ABCD4-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB25880) HSP 1 Score: 236 bits (601), Expect = 2.220e-63 Identity = 201/682 (29.47%), Postives = 294/682 (43.11%), Query Frame = 1 Query: 658 LLVTLAITYEVAASFIMTVIGDFYLAVSSQDWQLFMNVLWRSMLVVAVVGTLRACRDFACEACALQWRCNLVRYLHAHYLRGTVPYQLTRAGXXXXXXXXXXXXXXXXVDNPDQRIVSDAAALTTAMGEVIQKTLVVPGLLAYYTWYVAALFGWVAPAACYAYFALAGALNAVVLRRVVPRVYEAERREGTFRYAHAWLRANAEAVAFYGAAAAARAERHRLGYYFNSAVDARWRVLWAHLPLYACVQFFDYVGSIVNYAAVGISIFYLTKAHAASEAEISSLLARGSYSCLYIINAFSMGLDASASLTVVRASAGRVMELLCGAGFTAAASAKLSPYDRPELDIPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAXXXXXXXXXXXXALLTLRNVTVARPSAGGCAGGDSAWFRNGTEXXXXXXXXXXGNLITDLSLSVAEGEHVLICGASGCGKTSLLRVVAGLWEPRGGTVRHCGSSGXXXXXXAQNWSGGARGDGGGEYECERIMFLPQKPYTFVGTLADQVVYP-REWRDAAVACAAGRARVADILQQLRLSHLLRYGGXXXXXXXXXSAGLERVADWP--NVLSPGEAQRLALARALYHRPRLLLLDEATSALGEDAEADAMARLRAAGATLVSAGHRATLRRFHARALVLAGDAAGSWGVADL 2694 LL+ +A + AA F+ + FY+ + +QDW F+ LW+S+L + ++ +++ + + + ++WR L +LH Y + Y+L VDN DQRI D L + V+ +V P +A YT+ + G++ P Y YF + +N ++ VV Y+ E++EG FR+ HA LRAN+E+VAFY A E+ +D + + L + FDY+GSI++Y + I IF + +EISSL++ S+ +Y+I+ FS +D S ++ + R+ ELL + + S P ++P L V VA PS D LI DL+L V EG ++LI GA+G GKTSLLRV+ GLW GTV G IMFLPQK Y GTL DQ+ YP R + + +IL Q+ L L++ GL+ + W +VL+PGEAQ LA AR LY RPR LLDEATSA+ + EA A RAA TL+S GH TL+RFH L++ D G W + D+ Sbjct: 39 LLLLIAGGEQGAAYFVGLIPSQFYVVLPAQDWPGFITTLWQSLLFIMLISLIKSAKTYISKLLYVRWREALTTHLHKFYFKAFSYYKLN-------------VLQTGNVDNTDQRITQDVERLCNQLSLVVPTLIVSPFTIATYTYLTYEITGYLGPLVIYCYFIIGSVINKFIMSPVVNLTYQQEKQEGIFRFKHAQLRANSESVAFYSAG---DVEKDNADRKLFRLLDVQLTLTNWEFWLNVAINLFDYIGSILSYVIIAIPIFAGVY-NGLPASEISSLISAYSFQTMYLISCFSKLIDLSTKISDIGGYTHRIGELLESLEKLSPDTQTPSETGGPSGNVPRLGSNNDLTPLTSDTQFLISETEMDREYLSEDSREEVARGREEDEEEVSSVDSLIAFQLDQVAVATPSK------DEI-------------------LIKDLNLEVVEGRNILITGATGSGKTSLLRVLHGLWPVISGTVEQRG------------------------VRPSDIMFLPQKAYLTDGTLMDQITYPSRNPTRLSRSILEEDPDPCEILDQVGLEGLVQ-----------RCEGLDTLVSWNWYDVLTPGEAQCLAFARLLYQRPRFALLDEATSAVPSEKEAQLYALCRAAKMTLISVGHHVTLKRFHDAELII--DGQGGWTLVDI 641
BLAST of jgi.p|Trimin1|349234 vs. uniprot
Match: A0A7M7N530_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7N530_STRPU) HSP 1 Score: 226 bits (575), Expect = 1.020e-59 Identity = 200/690 (28.99%), Postives = 297/690 (43.04%), Query Frame = 1 Query: 658 LLVTLAITYEVAASFIMTVIGDFYLAVSSQDWQLFMNVLWRSMLVVAVVGTLRACRDFACEACALQWRCNLVRYLHAHYLRGTVPYQLTRAGXXXXXXXXXXXXXXXXVDNPDQRIVSDAAALTTAMGEVIQKTLVVPGLLAYYTWYVAALFGWVAPAACYAYFALAGALNAVVLRRVVPRVYEAERREGTFRYAHAWLRANAEAVAFYGAAAAARAERHRLGYYFNSAVDARWRVLWAHLPLYACVQFFDYVGSIVNYAAVGISIFYLTKAHAASEAEISSLLARGSYSCLYIINAFSMGLDASASLTVVRASAGRVMELLCGAGFTAAASAKLSPYDR--PELDIPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAXXXXXXXXXXXXALLT------LRNVTVARPSAGGCAGGDSAWFRNGTEXXXXXXXXXXGNLITDLSLSVAEGEHVLICGASGCGKTSLLRVVAGLWEPRGGTVRHCGSSGXXXXXXAQNWSGGARGDGGGEYECERIMFLPQKPYTFVGTLADQVVYP-REWRDAAVACAAGRARVADILQQLRLSHLLRYGGXXXXXXXXXSAGLERVADWP--NVLSPGEAQRLALARALYHRPRLLLLDEATSALGEDAEADAMARLRAAGATLVSAGHRATLRRFHARALVLAGDAAGSWGVADL 2694 LL+ +A + AA F+ + FY+ + ++DW F+ VLW+S+L + ++ +++ + + + ++WR + +LH Y + Y+L VDN DQRI D L + V+ +V P +A YT+ + G++ P Y YF + +N ++ VV Y+ E++EG FR+ HA LRAN+E+VAFY A + R + S VD + + L V FDY+GSI++Y + I IF + +EIS L++ S+ +Y+I+ FS +D S ++ + R+ ELL + +LSP + PE D + D + + L V VA PS LI DL+L V EG ++LI G++G GKTSLLRV+ GLW GTV G IMFLPQK Y GTL +Q+ YP + + + IL Q+ L L+ GL+ W +VL+PGEAQ LA AR LY RP+ LLDEATSA+ + EA + R A TL+S GH TL+RFH LV+ D G W + D+ Sbjct: 50 LLLLIAGGEQGAAYFVGLIPSQFYVVLPAKDWSGFLTVLWQSLLYIVLISLIKSAKTYISKLLYVRWREAMTAHLHKLYFKAFNYYKLN-------------VLQTGNVDNTDQRITQDVERLCNQLSLVVPTLIVSPFTIATYTYLTYEITGYLGPLVIYCYFIVGSVINKFIMSPVVNLTYQQEKQEGIFRFKHAQLRANSESVAFYSAGGVEKDNADRKLF---SLVDVQLTLTNWEFWLNVAVNLFDYLGSILSYVIIAIPIFAGVY-NGVPASEISGLISAYSFQTMYLISCFSKLIDLSTKISDIGGYTHRIGELL-------ESLEELSPNTKKSPETDESSRRNILHLDPDSDMTPTMTSDTHFLISEMDRDREYLSEDAREGLTRREEEEEEVSSVDSLIAFQLDQVAVATPSK-------------------------EDILIKDLTLEVVEGRNILITGSTGSGKTSLLRVLHGLWPVMSGTVEQRG------------------------VRPRDIMFLPQKAYLSDGTLMEQITYPSKNSMRFSRSLLDEDPDPCQILDQVGLEGLVH-----------RCDGLDTPVSWNWYDVLTPGEAQCLAFARLLYQRPKFALLDEATSAVPSEKEAQLYSLCREAKMTLISVGHHVTLKRFHDAELVI--DGRGGWTLVDI 653
BLAST of jgi.p|Trimin1|349234 vs. uniprot
Match: S4RAP4_PETMA (ATP-binding cassette, sub-family D (ALD), member 4 n=6 Tax=Petromyzon marinus TaxID=7757 RepID=S4RAP4_PETMA) HSP 1 Score: 219 bits (558), Expect = 6.590e-58 Identity = 196/664 (29.52%), Postives = 286/664 (43.07%), Query Frame = 1 Query: 718 GDFYLAVSSQDWQLFMNVLWRSMLVVAVVGTLRACRDFACEACALQWRCNLVRYLHAHYLRGTVPYQLTRAGXXXXXXXXXXXXXXXXVDNPDQRIVSDAAALTTAMGEVIQKTLVVPGLLAYYTWYVAALFGWVAPAACYAYFALAGALNAVVLRRVVPRVYEAERREGTFRYAHAWLRANAEAVAFYGAAAAARAERHRLGYYFNSAVDARWRVLWAHLPLYACVQFFDYVGSIVNYAAVGISIFYLTKAHAASEAEISSLLARGSYSCLYIINAFSMGLDASASLTVVRASAGRVMELLCGAGFTAAASAKLSPYDRPELDIPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAXXXXXXXXXXXXALLTLRNVTVARPSAGGCAGGDSAWFRNGTEXXXXXXXXXXGNLITDLSLSVAEGEHVLICGASGCGKTSLLRVVAGLWEPRGGTV--RHCGSSGXXXXXXAQNWSGGARGDGGGEYECERIMFLPQKPYTFVGTLADQVVYPREWRDAAVACAAGRARVADILQQLRLSHLLRYGGXXXXXXXXXSAGLERVADWP--NVLSPGEAQRLALARALYHRPRLL-LLDEATSALGEDAEADAMARLRAAGATLVSAGHRATLRRFHARALVLAGDAAGSWGVADL 2694 FY + S+D+ F ++ +++++A+ L++C + L WR ++ +LH Y RG Y+L +DNPDQRI D + + K L+ P L YYT+ GW+ P + +AYF + N +++ ++ + E+ EG FR+ H +R NAE+ AFY A R E R + + + ++ LY V FDY+GSI++Y + I IF H S +E+S+L+++ ++ C+Y+IN FS +D S+ L+ V R+ EL L P D P DE A L V+ + PS GTE L+ DLSL VA G+++L+ G +G GKT+LLRV+ GLW G+V R C G RG I+FLPQKPY GTL +QV+YP + V R+ L + LS LL G GL++ DW + LSPGE QRL AR YH+P +LDEATSAL ED E + + G T++S GHR++L +FH L L G G W + L Sbjct: 53 SQFYEILGSKDFPKFKGLVAIAVILIAINSFLKSCDQYVSSLLYLTWRRSVTEHLHDLYFRGRAYYRLNTL--------------QDALDNPDQRISQDVERFCKQLSLMASKLLISPFTLCYYTYQCFISTGWIGPVSVFAYFLVGTVTNKLLMGPIISTLVAQEKMEGDFRFKHMEIRVNAESAAFYRAG---RVEHTRTNARLHRLLSTQQTLMNKEFWLYLAVNMFDYMGSILSYVVIAIPIFAGVYDHL-SPSELSALVSKNAFVCIYLINCFSQLIDLSSKLSDVAGYTHRIGELQ---------EVLLEPTDAPN----------------------DKWDPTREASWDFESVIEAWDEVAKDA-----------FVLDCVSYSTPS--------------GTEA-----------LVQDLSLQVAWGQNILVVGNTGTGKTTLLRVLNGLWPTLKGSVHMRTCF---------------GPRG----------IIFLPQKPYFTDGTLREQVIYPLK-EMYPVTEDFDDKRILHFLDCVGLSALLDRTG-----------GLDQEVDWSWSDALSPGEMQRLTFARLFYHQPTYAEVLDEATSALTEDVEGEMYRMCKQLGMTVLSVGHRSSLEKFHDSILKLCGK--GRWELQTL 592
BLAST of jgi.p|Trimin1|349234 vs. uniprot
Match: UPI0014708DCD (ATP-binding cassette sub-family D member 4 isoform X1 n=2 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI0014708DCD) HSP 1 Score: 218 bits (555), Expect = 2.530e-57 Identity = 189/656 (28.81%), Postives = 285/656 (43.45%), Query Frame = 1 Query: 718 GDFYLAVSSQDWQLFMNVLWRSMLVVAVVGTLRACRDFACEACALQWRCNLVRYLHAHYLRGTVPYQLTRAGXXXXXXXXXXXXXXXXVDNPDQRIVSDAAALTTAMGEVIQKTLVVPGLLAYYTWYVAALFGWVAPAACYAYFALAGALNAVVLRRVVPRVYEAERREGTFRYAHAWLRANAEAVAFYGAAAAARAERHRLGYYFNSAVDARWRVLWAHLPLYACVQFFDYVGSIVNYAAVGISIFYLTKAHAASEAEISSLLARGSYSCLYIINAFSMGLDASASLTVVRASAGRVMELLCGAGFTAAASAKLSPYDRPELDIPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAXXXXXXXXXXXXALLTLRNVTVARPSAGGCAGGDSAWFRNGTEXXXXXXXXXXGNLITDLSLSVAEGEHVLICGASGCGKTSLLRVVAGLWEPRGGTVRHCGSSGXXXXXXAQNWSGGARGDGGGEYECERIMFLPQKPYTFVGTLADQVVYPREWRDAAVACAAGRARVADILQQLRLSHLLRYGGXXXXXXXXXSAGLERVADWP--NVLSPGEAQRLALARALYHRPRLLLLDEATSALGEDAEADAMARLRAAGATLVSAGHRATLRRFHARALVLAGDAAGSW 2679 FY ++ +D+ F +++ ++++++ + TL++ + C + WR L LH Y G V Y L +DNPDQRI D L M + + ++ P L YYT++ GW+ P + + YF + N +++ +V ++E E+ EG FR+ H +R NAE+ AFY A + E R + + + ++ L LY V FDY+G I++Y + I IF + E+S+L+++ ++ C+Y+IN FS +D S +L+ V RV EL+ + R + D A D A L N++ P + D L+ DLSL + +G H+L+ G +G GKTSLLRV+ LWE G V+ G RG MFLPQKPY GTL +QV+YP + A+ R R+ L+Q + LL+ G GL+ DW +VLSPGE QRL+ AR Y +P +LDEATSAL E+AEA + G TLVS GHR++L+++H L L GD G W Sbjct: 66 SHFYNVLADKDYPEFQSLVAKAVVLILLNSTLKSLDQYICNQMYISWRKILTESLHTDYFHGRVYYTLN--------------VLREDLDNPDQRISQDVERLCKQMSTMASRLIISPFTLGYYTYHCFTSTGWIGPVSIFIYFVIGTIANKILMGPIVSTLFEQEKLEGDFRFKHMQIRVNAESAAFYRAG---KVEHMRTDRRLQTLLQTQKLLINKELWLYIGVNTFDYLGGILSYIIIAIPIFSGIY-DGLTPGELSALISKNAFVCIYLINGFSQLIDLSTTLSDVAGYTHRVGELM----------EVMDDILRKQCDYDPASGESYDFDSDFHIHAGPV------------------DTA---------------FILDNLSYKSPYS------DQL-------------------LVKDLSLKIGQGTHLLVVGNTGTGKTSLLRVLNRLWEADSGFVQ-------------MTTCFGPRG----------TMFLPQKPYLTDGTLREQVIYPLKDIYPALGSVDDR-RIIQFLEQAGVPGLLKRTG-----------GLDEKVDWNWYDVLSPGEMQRLSFARLFYLQPEYAVLDEATSALTEEAEAQLYGICKQLGMTLVSLGHRSSLKKYHDVQLKLFGD--GRW 598
BLAST of jgi.p|Trimin1|349234 vs. uniprot
Match: A0A6P7YTT5_9AMPH (ATP-binding cassette sub-family D member 4 isoform X1 n=4 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7YTT5_9AMPH) HSP 1 Score: 216 bits (550), Expect = 1.230e-56 Identity = 187/662 (28.25%), Postives = 287/662 (43.35%), Query Frame = 1 Query: 718 GDFYLAVSSQDWQLFMNVLWRSMLVVAVVGTLRACRDFACEACALQWRCNLVRYLHAHYLRGTVPYQLTRAGXXXXXXXXXXXXXXXXVDNPDQRIVSDAAALTTAMGEVIQKTLVVPGLLAYYTWYVAALFGWVAPAACYAYFALAGALNAVVLRRVVPRVYEAERREGTFRYAHAWLRANAEAVAFYGAAAAARAE----RHRLGYYFNSAVDARWRVLWAHLPLYACVQFFDYVGSIVNYAAVGISIFYLTKAHAASEAEISSLLARGSYSCLYIINAFSMGLDASASLTVVRASAGRVMELLCGAGFTAAASAKLSPYDRPELDIPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAXXXXXXXXXXXXALLTLRNVTVARPSAGGCAGGDSAWFRNGTEXXXXXXXXXXGNLITDLSLSVAEGEHVLICGASGCGKTSLLRVVAGLWEPRGGTVRHCGSSGXXXXXXAQNWSGGARGDGGGEYECERIMFLPQKPYTFVGTLADQVVYP--REWRDAAVACAAGRARVADILQQLRLSHLLRYGGXXXXXXXXXSAGLERVADWP--NVLSPGEAQRLALARALYHRPRLLLLDEATSALGEDAEADAMARLRAAGATLVSAGHRATLRRFHARALVLAGDAAGSW 2679 ++ + +D + F N+ +++++ L++ F C + WR +L Y H +Y G V Y L +DNPDQRI D + + K L+ P LAYYT+ GW+ P + + YF + A+N V++ ++ + E+ EG FR+ H +R NAE+ AFY A R E RL Y + ++ ++ LW LY + FDY+GSI++Y + I IF H A++S+L++R ++ C+Y+IN FS +D S +++ V R+ EL + + E D A DE L V+ + PS+ D L+ +L+L+V++G ++LI G +G GKTSLLR++AGLWE G V+ G I+FLPQKP+ GTL +QV+YP + + D+ + R+ L+ LS LL G GL++ +W +VLSPGE QRL+ R Y +P+ +LDE TSAL EDAE + + G TL+S GHR +L +FH L L G+ G W Sbjct: 77 SQYFGVLGHRDLEGFKNLTAIAVILIITNSALKSFDQFICNLMYVNWRKDLTEYFHRYYFEGKVYYILN--------------VLHKDIDNPDQRISQDVERFCRQLSSMTSKVLISPFTLAYYTYQCFTSTGWLGPVSIFGYFVIGTAVNKVLMGPIIATLVHQEKLEGDFRFKHMQIRVNAESAAFYRAG---RVEYLRTNQRLAYLLQTQMELIYKELW----LYIGINTFDYLGSILSYVVIAIPIFSGVYGHM-DPADLSALVSRNAFVCIYLINCFSQLIDLSTTVSDVAGYTHRIGEL----------QETVLELAQQEKDSTAEREGNWNLNNVS-------------------------DEPMVAVD--------TAFLLERVSFSVPSS------DQL-------------------LVENLTLTVSQGNNLLIVGNTGTGKTSLLRILAGLWENTQGNVQVPSCFGPHG-----------------------ILFLPQKPFFSDGTLREQVIYPLTKIYPDSG---SVDDERILRFLELAGLSSLLARSG-----------GLDQKVEWNWYDVLSPGEMQRLSFTRLFYLQPKYAVLDEVTSALTEDAENELYRVCKQLGMTLISVGHRTSLEKFHELMLKLCGN--GKW 609
BLAST of jgi.p|Trimin1|349234 vs. uniprot
Match: A0A8C6SEW0_9GOBI (ATP-binding cassette, sub-family D (ALD), member 4 n=7 Tax=Gobiidae TaxID=8220 RepID=A0A8C6SEW0_9GOBI) HSP 1 Score: 214 bits (544), Expect = 7.730e-56 Identity = 189/664 (28.46%), Postives = 290/664 (43.67%), Query Frame = 1 Query: 718 GDFYLAVSSQDWQLFMNVLWRSMLVVAVVGTLRACRDFACEACALQWRCNLVRYLHAHYLRGTVPYQLTRAGXXXXXXXXXXXXXXXXVDNPDQRIVSDAAALTTAMGEVIQKTLVVPGLLAYYTWYVAALFGWVAPAACYAYFALAGALNAVVLRRVVPRVYEAERREGTFRYAHAWLRANAEAVAFYGAAAAARAERHRLGYYFNSAVDARWRVLWAHLPLYACVQFFDYVGSIVNYAAVGISIFYLTKAHAASEAEISSLLARGSYSCLYIINAFSMGLDASASLTVVRASAGRVMELLCGAGFTAAASAKLSPYDRPELDIPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAXXXXXXXXXXXXALLTLRNVTVARPSAGGCAGGDSAWFRNGTEXXXXXXXXXXGNLITDLSLSVAEGEHVLICGASGCGKTSLLRVVAGLWEPRGGTVRHCGSSGXXXXXXAQNWSGGARGDGGGEYECERIMFLPQKPYTFVGTLADQVVYPREWRDAAVACAAGRA---RVADILQQLRLSHLLRYGGXXXXXXXXXSAGLERVADWP--NVLSPGEAQRLALARALYHRPRLLLLDEATSALGEDAEADAMARLRAAGATLVSAGHRATLRRFHARALVLAGDAAGSWGVADL 2694 FY + +D+ F +++ ++M+++ + TL++ + C L+WR L LH+ Y +G V Y L +DNPDQRI DA L M + + +V P L YY+++ GW+ P + + YF + N +++ +V ++E E+ EG FR+ H +R NAE+ AFY A + E R S + + ++ L LY V FDY+G ++Y + I IF + E+S+L+++ ++ C+Y+IN F+ +D S +L+ V RV EL + R + D A NV A P D+A+ + L+ DLS+ +++G+H+L+ G +G GKTSLLRV+ LWE G V+ G RG +FLPQKPY GTL +QV+YP + + A+G R+ + L+ +S LL+ G GL+ DW +VLSPGE QRL+ AR Y +P+ +LDEATSAL EDAEA + TLV+ GHR++L +FH L L G G W +L Sbjct: 66 SHFYNVLGDKDYPGFRSLIGKAMVLIILNSTLKSIDQYICNLMYLRWRRTLTESLHSAYFQGRVYYTLN--------------VLREDIDNPDQRISQDAERLCKQMSTMASRLIVSPFTLGYYSYHCYHSTGWIGPVSIFCYFVVGTIANKILMGPIVSTLFEQEKLEGDFRFKHMQIRVNAESAAFYRAG---KVEHMRTDRRLQSLLQTQRSLIDKELWLYIGVNTFDYLGGFLSYIIIAIPIF-TGLYDGLTPGELSALISKNAFVCIYLINGFTQLIDLSTALSDVAGYTHRVGEL----------REVMDDILRKQCDYDPASGESYDFDSDF-----------------------------------------------NVH-AGPV-------DTAFILDHLSYKSPYSDEL---LVEDLSMKISQGQHLLVVGNTGTGKTSLLRVLNRLWEADSGFVQ-------------MTTCFGPRG----------TLFLPQKPYLTDGTLREQVIYPLK----DIYPASGLVDDDRIMNFLELAGVSSLLKRTG-----------GLDEKVDWNWYDVLSPGEMQRLSFARLFYLQPKYAILDEATSALTEDAEAQLYRTCKQLDMTLVTLGHRSSLEKFHDVELKLCGG--GRWEFTNL 603
BLAST of jgi.p|Trimin1|349234 vs. uniprot
Match: D2GZW5_AILME (Uncharacterized protein (Fragment) n=34 Tax=Laurasiatheria TaxID=314145 RepID=D2GZW5_AILME) HSP 1 Score: 211 bits (537), Expect = 4.650e-55 Identity = 185/658 (28.12%), Postives = 286/658 (43.47%), Query Frame = 1 Query: 718 GDFYLAVSSQDWQLFMNVLWRSMLVVAVVGTLRACRDFACEACALQWRCNLVRYLHAHYLRGTVPYQLTRAGXXXXXXXXXXXXXXXXVDNPDQRIVSDAAALTTAMGEVIQKTLVVPGLLAYYTWYVAALFGWVAPAACYAYFALAGALNAVVLRRVVPRVYEAERREGTFRYAHAWLRANAEAVAFYGAAAAARAERHRLGYYFNSAVDARWRVLWAHLPLYACVQFFDYVGSIVNYAAVGISIFYLTKAHAASEAEISSLLARGSYSCLYIINAFSMGLDASASLTVVRASAGRVMELLCGAGFTAAASAKLSPYDRPELDIPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAXXXXXXXXXXXXALLTLRNVTVARPSAGGCAGGDSAWFRNGTEXXXXXXXXXXGNLITDLSLSVAEGEHVLICGASGCGKTSLLRVVAGLWEPRGGTVRHCGSSGXXXXXXAQNWSGGARGDGGGEYECERIMFLPQKPYTFVGTLADQVVYPRE--WRDAAVACAAGRARVADILQQLRLSHLLRYGGXXXXXXXXXSAGLERVADWP--NVLSPGEAQRLALARALYHRPRLLLLDEATSALGEDAEADAMARLRAAGATLVSAGHRATLRRFHARALVLAGDAAGSW 2679 +Y + ++D F + + +++++ + L++ F C + WR +L +LH Y RG V Y L VDNPDQRI D + + K ++ P L YYT+ GW+ P + + YF L +N +++ +V ++ + E+ EG FR+ H +R NAE AF+ A E R + + ++ L LY V FDY+GSI++Y + I IF S AE+S+L+++ ++ C+Y+I+ F+ +D S++L+ V R+ EL S D E D+ D AA VA P+ D+A+ N LI DLSL ++EG+ +LI G +G GKTSLLRV+ GLW G+V+ G ++FLPQKP+ GTL +QV+YP + + D+ + R+ L+ LS L+ + GL++ DW +VLSPGE QRL+ AR Y +P+ +LDEATSAL E+ E++ + G T +S GHR +L +FH+ L L GD G W Sbjct: 53 SQYYGVLGNKDLDGFKTLTFLAVVLIVLNSMLKSFDQFTCNLLYVSWRKDLTEHLHRFYFRGRVYYTLN--------------VLRDDVDNPDQRISQDVERFCRQLSSMASKLIISPFTLIYYTYQCFQSTGWLGPVSIFGYFILGTLVNKMLMGPIVAKLVQQEKLEGDFRFKHMQIRVNAEPAAFFRAG---HVEHMRTDRRLQRLLQTQRELMSKELWLYIGVNTFDYLGSILSYVVIAIPIFSDVYGDL-SPAELSTLVSKNAFVCIYLISCFTGLIDLSSTLSDVAGYTHRIGELQETLQDMTLKSRGGEILDESEWDM---------------------------------------DRAAEWP------------------VAEPT-------DTAFLLNRVSICAPSSHKP---LIKDLSLKISEGQSLLITGNTGTGKTSLLRVLGGLWTSARGSVQMVTDFGPHG-----------------------VLFLPQKPFFTDGTLREQVIYPLKEIYPDSG---STDDERIVRFLELAGLSSLVT-----------RTEGLDKQVDWNWYDVLSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVESELYRIGQQLGMTFISVGHRQSLEKFHSLVLKLCGD--GRW 586
BLAST of jgi.p|Trimin1|349234 vs. uniprot
Match: F1N3B4_BOVIN (ATP binding cassette subfamily D member 4 n=25 Tax=Pecora TaxID=35500 RepID=F1N3B4_BOVIN) HSP 1 Score: 211 bits (536), Expect = 7.930e-55 Identity = 185/658 (28.12%), Postives = 279/658 (42.40%), Query Frame = 1 Query: 718 GDFYLAVSSQDWQLFMNVLWRSMLVVAVVGTLRACRDFACEACALQWRCNLVRYLHAHYLRGTVPYQLTRAGXXXXXXXXXXXXXXXXVDNPDQRIVSDAAALTTAMGEVIQKTLVVPGLLAYYTWYVAALFGWVAPAACYAYFALAGALNAVVLRRVVPRVYEAERREGTFRYAHAWLRANAEAVAFYGAAAAARAERHRLGYYFNSAVDARWRVLWAHLPLYACVQFFDYVGSIVNYAAVGISIFYLTKAHAASEAEISSLLARGSYSCLYIINAFSMGLDASASLTVVRASAGRVMELLCGAGFTAAASAKLSPYDRPELDIPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAXXXXXXXXXXXXALLTLRNVTVARPSAGGCAGGDSAWFRNGTEXXXXXXXXXXGNLITDLSLSVAEGEHVLICGASGCGKTSLLRVVAGLWEPRGGTVRHCGSSGXXXXXXAQNWSGGARGDGGGEYECERIMFLPQKPYTFVGTLADQVVYPRE--WRDAAVACAAGRARVADILQQLRLSHLLRYGGXXXXXXXXXSAGLERVADWP--NVLSPGEAQRLALARALYHRPRLLLLDEATSALGEDAEADAMARLRAAGATLVSAGHRATLRRFHARALVLAGDAAGSW 2679 ++ + ++D F + + S++++ + L++ F C + WR +L +LH Y RG V Y L VDNPDQRI D + + K ++ P L YYT+ W+ P + + YF L +N VV+ +V ++ + E+ EG FR+ H +R NAE AF+ A E R + + ++ L LY + FDY+GSI++Y + I IF S E+SSL+++ ++ C+Y+IN FS +D +L+ V R+ EL L D LD D A A L L V + PS+ LI DLSL ++EG+ +LI G +G GKTSLLRV+ GLW G+V+ G ++FLPQKP+ GTL +QV+YP + + D+ + R+ L+ LS L+ + GL++ DW +VLSPGE QRL+ AR Y +P+ +LDEATSAL E+ E++ + G T +S GHR +L +FH+ L L GD G W Sbjct: 65 SQYFGVLGNKDLNGFKTLTFLSVVLIVLQSMLKSFDQFTCNLLYVSWRKDLTEHLHRLYFRGRVYYTLN--------------VLRDDVDNPDQRISQDVERFCRQLSSMASKLIISPFTLVYYTYQCFRSTSWLGPVSIFGYFILGTVVNRVVMGPIVAKLVQQEKLEGDFRFKHMQIRVNAEPAAFFRAG---HVEHMRTDRRLQRLLKTQRELMSKELWLYIGINMFDYLGSILSYIVIAIPIFSGVYGDL-SPTELSSLVSKNAFVCMYLINCFSQLIDLCTTLSDVAGYTHRIGELQ-----ETLLDMTLKSQDGEFLD------------------------------------ESQWDLARGPGGPATEPADTAFL-LERVCICAPSS-------------------------HKPLIKDLSLKISEGQSLLITGNTGTGKTSLLRVLGGLWASARGSVQMLADFGPHG-----------------------VLFLPQKPFFTDGTLREQVIYPLKEIYPDSG---STDDERIMRFLELAGLSSLVA-----------RTEGLDQQVDWNWYDVLSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVESELYRVGQQLGMTFISVGHRRSLEKFHSLVLRLCGD--GRW 598 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349234 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9219 ID=mRNA_9219|Name=jgi.p|Trimin1|349234|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2697bp|location=Sequence derived from alignment at Contig_39:503649..510187- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GGGCTGTCCTGCGCTTTACTCTTGCTGGTGAGCTGCTGCCATGCATTCATback to top protein sequence of jgi.p|Trimin1|349234 >Trimin1|349234|estExt_Genemark1.C_Ctg_390064 ID=Trimin1|349234|estExt_Genemark1.C_Ctg_390064|Name=jgi.p|Trimin1|349234|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=841bp MMRSAWLAQELLSTFEKEIGEVALQPSPVSGTFRIAANGIEVWERKKDGGback to top mRNA from alignment at Contig_39:503649..510187- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9219 ID=mRNA_9219|Name=jgi.p|Trimin1|349234|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6539bp|location=Sequence derived from alignment at Contig_39:503649..510187- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_39:503649..510187- >mRNA_9219 ID=mRNA_9219|Name=jgi.p|Trimin1|349234|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2523bp|location=Sequence derived from alignment at Contig_39:503649..510187- (Tribonema minus UTEX_B_3156 )back to top |