mRNA_921 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|156795 vs. uniprot
Match: A0A835ZHB6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHB6_9STRA) HSP 1 Score: 819 bits (2115), Expect = 3.360e-299 Identity = 425/425 (100.00%), Postives = 425/425 (100.00%), Query Frame = 1
Query: 1 MEVPKAWGLERLAGPGGAGARAXXXXXXEAVVDAQPPCAAASTPPLRLRALRPHQTEALAALESRLRSSPLGGGGVVVLPCGFGKTVAALELCRRMGVRAAIVVHTSVLAAQWKAAIAQYVPDASVGEIRADAFDVEGRTHVIASLQSVAFREYPPHGCGLMIADERHRVAAPALSAAVARIGCRYRVGLSATPVRADGLHVFLGWCIGPVVHETRRESRRDLRAIAVRLDPGPVRTISISKGGRRVDNISAMTSLTCDFSEPRAVRRQELAGAWIRLCVGKGRKVLVLSDRVALLSDLSTRLGDYTWGFLTGSAKPADRKAAEGRDVILASYGCAAEGLDVPSLDTVLLLTPRSGEAVITQVVGRLFRTGGMPPLVVDLVDGVPLFEGMHAKRRRIMRGMGGTVTDCDELRRPLPPPPSPPGAG 1275
MEVPKAWGLERLAGPGGAGARAXXXXXXEAVVDAQPPCAAASTPPLRLRALRPHQTEALAALESRLRSSPLGGGGVVVLPCGFGKTVAALELCRRMGVRAAIVVHTSVLAAQWKAAIAQYVPDASVGEIRADAFDVEGRTHVIASLQSVAFREYPPHGCGLMIADERHRVAAPALSAAVARIGCRYRVGLSATPVRADGLHVFLGWCIGPVVHETRRESRRDLRAIAVRLDPGPVRTISISKGGRRVDNISAMTSLTCDFSEPRAVRRQELAGAWIRLCVGKGRKVLVLSDRVALLSDLSTRLGDYTWGFLTGSAKPADRKAAEGRDVILASYGCAAEGLDVPSLDTVLLLTPRSGEAVITQVVGRLFRTGGMPPLVVDLVDGVPLFEGMHAKRRRIMRGMGGTVTDCDELRRPLPPPPSPPGAG
Sbjct: 1 MEVPKAWGLERLAGPGGAGARAXXXXXXEAVVDAQPPCAAASTPPLRLRALRPHQTEALAALESRLRSSPLGGGGVVVLPCGFGKTVAALELCRRMGVRAAIVVHTSVLAAQWKAAIAQYVPDASVGEIRADAFDVEGRTHVIASLQSVAFREYPPHGCGLMIADERHRVAAPALSAAVARIGCRYRVGLSATPVRADGLHVFLGWCIGPVVHETRRESRRDLRAIAVRLDPGPVRTISISKGGRRVDNISAMTSLTCDFSEPRAVRRQELAGAWIRLCVGKGRKVLVLSDRVALLSDLSTRLGDYTWGFLTGSAKPADRKAAEGRDVILASYGCAAEGLDVPSLDTVLLLTPRSGEAVITQVVGRLFRTGGMPPLVVDLVDGVPLFEGMHAKRRRIMRGMGGTVTDCDELRRPLPPPPSPPGAG 425
BLAST of jgi.p|Trimin1|156795 vs. uniprot
Match: A0A835YY40_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY40_9STRA) HSP 1 Score: 414 bits (1065), Expect = 2.580e-139 Identity = 222/412 (53.88%), Postives = 282/412 (68.45%), Query Frame = 1
Query: 1 MEVPKAWGLERLAGPGGAGARAXXXXXXEAVVDAQPPCAAASTPPLRLRALRPHQTEALAALESRLRSSPLGGGGVVVLPCGFGKTVAALELCRRMGVRAAIVVHTSVLAAQWKAAIAQYVPDASVGEIRADAFDVEGRTHVIASLQSVAFREYPPHGCGLMIADERHRVAAPALSAAVARIGCRYRVGLSATPVRADGLHVFLGWCIGPVVHETRRESRRDLRAIAVRLDPGPVRTISISKGGRRVDNISAMTSLTCDFSEPRAVRRQELAGAWIRLCVGKGRKVLVLSDRVALLSDLSTRLGDYTWGFLTGSAKPADRKAAEGRDVILASYGCAAEGLDVPSLDTVLLLTPRSGEAVITQVVGRLFRTGGMPPLVVDLVDGVPLFEGMHAKRRRIMRGMGGTVTDCDELR 1236
+EVPK WGL+R V D Q P A +T PL + LRPHQ AL A+ES + GGGGV+VLPCGFGKT+ A+ L +RMGVR IV HT VL QW+AAIAQ+VPDA +GE++ + F V+G THVIASL+SVA R+YPPHGCGL+ DE H ++A LS AVA++G R+R+GLSATP RADGL F+ W +GP + E RE++ LR AVR+ GPV+T ++ + G+ V NIS M +L S A RRQEL AWIRLC KGRKVLVL+DR+ LL DLS ++G++++GF+TG+ K DR AA ++L +YG AEG D P LDTV+L TPRSG++V+TQVVGRL R GG PLV+D VD VPLF GMH KR ++ R + +VT DE R
Sbjct: 46 LEVPKMWGLQRYE-----------------VDDRQGPHIAVTTAPLSVT-LRPHQAAALTAIESAFAAEH-GGGGVLVLPCGFGKTMTAIALAQRMGVRCLIVCHTGVLMEQWRAAIAQFVPDAVIGEMQQNKFVVDGCTHVIASLKSVALRDYPPHGCGLLCIDEAHHISALLLSKAVAKLGTRWRLGLSATPTRADGLSPFMTWSLGPTLFEQEREAKTGLRVFAVRVTTGPVKTKTLRRAGKEVANISGMMNLLVKKSVA-ATRRQELVAAWIRLCASKGRKVLVLADRLELLRDLSKQMGEFSFGFMTGAVKVKDRAAAAEAQILLGTYGVVAEGFDEPRLDTVVLTTPRSGQSVMTQVVGRLLRDGGKSPLVIDFVDDVPLFVGMHWKRMKVYRKLQASVTCYDEQR 437
BLAST of jgi.p|Trimin1|156795 vs. uniprot
Match: A0A835YYF9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYF9_9STRA) HSP 1 Score: 379 bits (973), Expect = 2.160e-125 Identity = 217/416 (52.16%), Postives = 269/416 (64.66%), Query Frame = 1
Query: 1 MEVPKAWGLERLAGPGGAGARAXXXXXXEAVVDAQPPCAAASTPPLRLRALRPHQTEALAALESRLRSSPLGGGGVVVLPCGFGKTVAALELCRRMGVRAAIVVHTSVLAAQWKAAIAQYVPDASVGEIRADAFDVEGRTHVIASLQSVAFREYPPH--GCGLMIADERHRVAAPALSAAVARIGCRYRVGLSATPVRADGLHVFLGWCIGPVVHETRRESRRDLRAIAVRLDPGPVRTISISKGGRRVDNISAMTSLTCDFSEPRAVRRQELAGAWIRLCVGKGRKVLVLSDRVALLSDLSTRLGD-YTWGFLTGSAKPADRKAAEGRDVILASYGCAAEGLDVPSLDTVLLLTPRSGEAVITQVVGRLFRTGGMPPLVVDLVDGVPLFEGMHAKRRRIMRGMGGTVTDCDELRR 1239
+EVPK WGLE L GA A + V + + T LRPHQ EA A+ S GGG ++VLPCG+GKTV AL + +MGVR IV HT VL +QW AAI QY P+A VG I+ + FDVE +THVIASL+S+A REY GC LM+ADE H +AA LS AVA GCRYR+GLSATP R DGL FLGW IG VV+E R +LR AV L+ GPV T + K G+ V NI+ M +L D S RA RQ++A AWI LC KGR ++VL+DR++LL DL R+ D T GF+ G+AK A+R+AA V+ ASYG AAEGLD+ LDT++ LTPRSGE VITQ+VGR+ R G PPL+VD VD VPLF GM +KR R+ +G +T DE+R+
Sbjct: 34 LEVPKFWGLENLDR---LGANAVEDRQFDGVQLQEQDVVSTITQ------LRPHQVEAADAIMKAF-SQEYGGGALLVLPCGYGKTVTALHVAAKMGVRCLIVCHTDVLVSQWAAAILQYFPNARVGMIKQNMFDVEDKTHVIASLKSLAVREYDMKQAGCALMVADEVHHIAALQLSRAVANAGCRYRLGLSATPNRPDGLSDFLGWSIGEVVYEVVRPPADNLRVYAVMLEDGPVYTKVVRKAGKDVSNIAGMINLMTDLSNSRADMRQQVAAAWITLCAQKGRSIIVLADRISLLRDLDRRVRDTITTGFMIGAAKKAEREAAGSAQVVFASYGVAAEGLDL-KLDTLVALTPRSGEGVITQIVGRIQRGHGRPPLIVDFVDAVPLFRGMFSKRMRVYNKLGAKLTKYDEMRQ 438
BLAST of jgi.p|Trimin1|156795 vs. uniprot
Match: A0A835Z102_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z102_9STRA) HSP 1 Score: 379 bits (972), Expect = 3.960e-125 Identity = 217/421 (51.54%), Postives = 271/421 (64.37%), Query Frame = 1
Query: 1 MEVPKAWGLERLAGPGGAGARAXXXXXXEAVVDAQPPCAAASTPP-LRLRALRPHQTEALAALESRLRSSPLGGGGVVVLPCGFGKTVAALELCRRMGVRAAIVVHTSVLAAQWKAAIAQYVPDASVGEIRADAFDVEGRTHVIASLQSVAFREYPPHGCGLMIADERHRVAAPALSAAVARIGCRYRVGLSATPVRADGLHVFLGWCIGPVVHETRRESRRDLRAIAVRLD-PG--PVRTISISKGGRRVDNISAMTSLTCDFSEPRAVR--RQELAGAWIRLCVGKGRKVLVLSDRVALLSDLSTRLGDYTWGFLTGSAKPADRKAAEGRDVILASYGCAAEGLDVPSLDTVLLLTPRSGEAVITQVVGRLFRTGGMPPLVVDLVDGVPLFEGMHAKRRRIMRGMGGTVTDCDELRRPL 1245
+ VPK +GL+ + V D Q PP L + +LR HQ +A A+ + L GGG ++ LPCG+GKTV ALE+ RR+GVR I+V+T VL AQWKA IA+ VP A VG I+ + F V+G THV+ASL+S+A R YP HGCGL I DE H +AA +S A+A G R+R+GLSATP RADGL +L W IGP+ + R + LR A+ L P PVRT++I KGG+ V N + M +L +P A RQ L WIRLCV KGRKVLVLSDR++LL DLS RLG T+GF+ G+A+ +R+AA DVI AS+ CAAEGLD+PSLDT+ L+TPRSGEAVITQVVGRL R GG PLV+D VD V LF GM KR R+ R +G TVT D R L
Sbjct: 46 LAVPKQYGLQNFSD----------------VDDRQTQAETVVVPPSLAVESLRAHQVKATEAVMTALTRRQEGGGCILQLPCGYGKTVTALEVARRLGVRTLIIVNTQVLEAQWKAVIAEKVPGAVVGCIKQNDFSVDGTTHVVASLKSLATRRYPVHGCGLTIVDEAHHIAACLMSRALAHCGTRWRLGLSATPERADGLSCYLQWSIGPLAYSIGRAIAQGLRVYAIELSGPSRTPVRTLNIHKGGQLVANSAGMINL---LQKPSAAAEFRQALVATWIRLCVSKGRKVLVLSDRISLLKDLSGRLGTATFGFIIGAARKEEREAAAAADVICASFACAAEGLDIPSLDTLCLVTPRSGEAVITQVVGRLLRAGGRSPLVLDFVDDVRLFGGMFGKRCRVYRTLGATVTRYDHARNEL 447
BLAST of jgi.p|Trimin1|156795 vs. uniprot
Match: A0A835ZFL4_9STRA (EsV-1-66 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFL4_9STRA) HSP 1 Score: 370 bits (950), Expect = 1.180e-121 Identity = 214/415 (51.57%), Postives = 264/415 (63.61%), Query Frame = 1
Query: 1 MEVPKAWGLERLAGPGGAGARAXXXXXXEAVVDAQPPCAAASTPPLRLRALRPHQTEALAALESRLRSSPLGGGGVVVLPCGFGKTVAALELCRRMGVRAAIVVHTSVLAAQWKAAIAQYVPDASVGEIRADAFDVEGRTHVIASLQSVAFREYPPH--GCGLMIADERHRVAAPALSAAVARIGCRYRVGLSATPVRADGLHVFLGWCIGPVVHETRRESRRDLRAIAVRLDPGPVRTISISKGGRRVDNISAMTSLTCDFSEPRAVRRQELAGAWIRLCVGKGRKVLVLSDRVALLSDLSTRLGD-YTWGFLTGSAKPADRKAAEGRDVILASYGCAAEGLDVPSLDTVLLLTPRSGEAVITQVVGRLFRTGGMPPLVVDLVDGVPLFEGMHAKRRRIMRGMGGTVTDCDELR 1236
+EVPK WGL+ L GA + E V +A T LRPHQ EA ++ S GGGG++VLPCG+GKTV AL + +MGVR IV HT VL QW AAI QY P+A VG I+ + F+V+ +THVIASL+S+A R+Y GC LMI DE H V A LS AVA GC+YR+GLSATP R DGL FL W IG +V+E R DLR AV + GPVRT IS+GG+ V NI+ M +L D + RA RQ +A AWI LC K RK++VL+DR++LL DL R+ D T FL G+AK A+R AA V+ ASYG AAEGLD+P LDT++L TPRSGE VITQ VGR+ R G PPLV+D+VD VPLF M AKR R+ + +G +T DE R
Sbjct: 53 LEVPKFWGLDNLEK---LGAVSVEDHQFEGVRLEDEDVVSAITQ------LRPHQVEATESIMKAF-SKEYGGGGLLVLPCGYGKTVTALHVAAKMGVRGLIVCHTDVLVTQWAAAIVQYFPNARVGLIKQNTFNVDDKTHVIASLKSLAVRDYDMQTAGCELMIVDEAHHVCALQLSRAVANAGCKYRLGLSATPTRPDGLSDFLAWSIGEIVYEVTRPPADDLRVFAVMMGDGPVRTKLISRGGKDVSNIAGMINLLTDMTNARADMRQRVAAAWILLCASKRRKIIVLADRISLLRDLDRRVRDSVTTSFLFGAAKKAERAAAGDAQVVFASYGLAAEGLDLP-LDTLILTTPRSGEGVITQTVGRIQRGRGRPPLVIDIVDAVPLFLSMFAKRLRVYKKLGAKMTKYDENR 456
BLAST of jgi.p|Trimin1|156795 vs. uniprot
Match: A0A835Z7P3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P3_9STRA) HSP 1 Score: 356 bits (913), Expect = 4.920e-116 Identity = 196/372 (52.69%), Postives = 253/372 (68.01%), Query Frame = 1
Query: 142 LRALRPHQTEALAALESRLRSSPLGGGGVVVLPCGFGKTVAALELCRRMGVRAAIVVHTSVLAAQWKAAIAQYVPDASVGEIRADAFDVEGRTHVIASLQSVAFREYPPHG--CGLMIADERHRVAAPALSAAVARIGCRYRVGLSATPVRADGLHVFLGWCIGPVVHETRRESRRDLRAIAVRLDPGPVRTISISKGGRRVDNISAMTSLTCDFSEPRAVRRQELAGAWIRLCVGKGRKVLVLSDRVALLSDLSTRLGDYTWG--FLTGSAKPADRKAAEGRDVILASYGCAAEGLDVPSLDTVLLLTPRSGEAVITQVVGRLFRTGGMPPLVVDLVDGVPLFEGMHAKRRRIMRGMGGTVTDCDELRRPL 1245
+R LRPHQ EA A+ ++ ++ GGG ++VL CG GKTV AL + + ++ I+ HT VLA+QW AAI QY P A VG+I+ + FDVE +THVIASL+SVA R+Y G CGL++ DE HR+A+ L AVA +GC+YR+GLSATP RADGL FL W IGPVV++ R+ DLR + LD GPV + K G+ V NI+ M +L + ++ RA RQ++A AWIRLC KGRK++VLSDR+ LL L + D+ G L GSAK A R A VILASYG A+EG DVPSLDT++LLTPRSG VITQ VGR+ R GG PLV+D+VD V LF+GM AKR ++ +GGT+T +E R L
Sbjct: 93 IRQLRPHQIEATKAV-TKAFNTRYGGGALLVLSCGMGKTVTALHIAATLKLKCLIITHTDVLASQWAAAIMQYYPKARVGKIQQNTFDVEDKTHVIASLKSVATRQYDMAGAGCGLLVVDEVHRIASLQLHRAVANVGCKYRLGLSATPDRADGLSPFLKWGIGPVVYQLERDPTPDLRIFGIMLDSGPVYPKVVRKNGKSVANIAGMINLMTEDTD-RAKMRQQVAAAWIRLCAKKGRKIIVLSDRIDLLKGLEKLMKDHVDGTSLLIGSAKRAVRDVAHLSQVILASYGIASEGFDVPSLDTIILLTPRSGANVITQCVGRIQRPGGKSPLVIDIVDSVGLFKGMFAKRCKVYEHLGGTITKYNERREIL 462
BLAST of jgi.p|Trimin1|156795 vs. uniprot
Match: A0A835YWZ8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWZ8_9STRA) HSP 1 Score: 354 bits (909), Expect = 1.850e-115 Identity = 201/419 (47.97%), Postives = 258/419 (61.58%), Query Frame = 1
Query: 1 MEVPKAWGLERLAGPGGAGAR----AXXXXXXEAVVDAQPPCAAASTPPLRLRALRPHQTEALAALESRLRSSPLGGGGVVVLPCGFGKTVAALELCRRMGVRAAIVVHTSVLAAQWKAAIAQYVPDASVGEIRADAFDVEGRTHVIASLQSVAFREYP--PHGCGLMIADERHRVAAPALSAAVARIGCRYRVGLSATPVRADGLHVFLGWCIGPVVHETRRESRRDLRAIAVRLDPGPVRTISISKGGRRVDNISAMTSLTCDFSEPRAVRRQELAGAWIRLCVGKGRKVLVLSDRVALLSDLSTRLGD-YTWGFLTGSAKPADRKAAEGRDVILASYGCAAEGLDVPSLDTVLLLTPRSGEAVITQVVGRLFRTGGMPPLVVDLVDGVPLFEGMHAKRRRIMRGMGGTVTDCDELR 1236
+EVPK WGL L G + E VV + LRPHQ EA + SS GGG ++VLPCG+GKT+ AL + +M ++ +V HT VL QW AIAQY P+A VG+I+ + DV +TH+IASL+S+A REY GC +++ DE AA LS A++ GCRYR+GLSATP R DGL VFL W IG VV+E +R DLR AV LD GPV +I KGG+ + N++ M +L D + RA RQ++A AWI LC KGRK+++LSDR+ LL DL R+ D T GF+ G+AK A+R A V+ ASYG AAEGLD+ S+DT+LLL+PRSGE VITQ VGR+ R G PLV+DLVD V F GM AKR R+ + +G +T DE R
Sbjct: 53 LEVPKLWGLHNLRQLGASTVEDRQIRGVSLHDEDVVST-------------ITHLRPHQLEATDTILRAFESSEYGGGALLVLPCGYGKTITALHVVAKMKMKCLVVCHTDVLVCQWATAIAQYFPNARVGKIQQNICDVHDKTHIIASLKSLAMREYDMTSAGCDVIVVDECQHAAALQLSRAMSNAGCRYRLGLSATPTRPDGLSVFLNWSIGEVVYEVKRPPADDLRVYAVILDEGPVYMKTIRKGGKSISNMAGMINLLTDMTIARADLRQQVAAAWIMLCASKGRKLIILSDRICLLRDLDRRVRDTVTTGFMIGTAKKAERATAADSQVVFASYGVAAEGLDI-SVDTLLLLSPRSGENVITQCVGRIQRGRGRSPLVIDLVDSVAPFHGMFAKRLRVYKSLGAVLTKYDEAR 457
BLAST of jgi.p|Trimin1|156795 vs. uniprot
Match: Q8QNK6_ESV1K (EsV-1-66 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNK6_ESV1K) HSP 1 Score: 223 bits (568), Expect = 2.480e-64 Identity = 144/372 (38.71%), Postives = 199/372 (53.49%), Query Frame = 1
Query: 151 LRPHQTEALAALESRLRSSPLGGGGVVVLPCGFGKTVAALELCRRMGVRAAIVVHTSVLAAQWKAAIAQYVPDASVGEIRADAFDVEGRTHVIASLQSVAFREYPPH---GCGLMIADERHRVAAPALSAAVARIGCRYRVGLSATPVRADGLHVFLGWCIGPVVHETRRESRRDLRAIAVRLDPGPVRTISISKGGRRVDNISAMTSLTCDFSEPRAVRRQELAGAWIRLCVGKGRKVLVLSDRVALLSDLSTRLGDYTW---GFLTGSAKPADRKAAEGRDVILASYGCAAEGLDVPSLDTVLLLTPRSGEAVITQVVGRLFR--TGGMPPLVVDLVDGVPLFEGMHAKRRRIMRGMGGTVTDCDELRRP 1242
LR Q E +E +R+ GGV+ L CGFGKT +L++ + I+VHT+ L QWK I Q+V +ASVG ++ D DV GR+HVIA +QSV+ R YP GLMI DE H V A LS V ++GC+ R+GLSATP R DG+ FL IGP+ R ++ V + GP T+ + + G++ N++ M + CD ++P R EL I + + R V+VLSDR L + + L + GF+ G KPAD +A R VI+A+Y +EGLD+PSLDT +L TPRS I Q GR+ R P V+D VD +F+G KR + + DE P
Sbjct: 92 LRERQVE---PVEKTIRALETVHGGVMSLYCGFGKTTCSLKVSCHFKKKTIILVHTTALLEQWKERIEQFVTNASVGVLQRDNIDVTGRSHVIALMQSVSRRNYPRELLDSFGLMIVDEAHHVCAAQLSRCVTKVGCKLRLGLSATPFRKDGMTQFLFDSIGPICARVDR-GYEEVLVDVVYVTSGPSETVCMKRKGKQSPNLAKMINNLCDVNDPAGESRTELVIETIVNALAEHRHVIVLSDRRNHLKVMGSMLAETAGVEVGFMVGGIKPADIEAVSARRVIMATYAYCSEGLDIPSLDTCVLATPRSD---IVQCCGRILRYHPSKQVPRVIDFVDDSVVFQGQARKRNMYYSKLRAFINYFDEDLEP 456
BLAST of jgi.p|Trimin1|156795 vs. uniprot
Match: D8LP98_ECTSI (EsV-1-66 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP98_ECTSI) HSP 1 Score: 215 bits (548), Expect = 2.120e-61 Identity = 138/361 (38.23%), Postives = 191/361 (52.91%), Query Frame = 1
Query: 184 LESRLRSSPLGGGGVVVLPCGFGKTVAALELCRRMGVRAAIVVHTSVLAAQWKAAIAQYVPDASVGEIRADAFDVEGRTHVIASLQSVAFREYPPH---GCGLMIADERHRVAAPALSAAVARIGCRYRVGLSATPVRADGLHVFLGWCIGPVVHETRRESRRDLRAIAVRLDPGPVRTISISKGGRRVDNISAMTSLTCDFSEPRAVRRQELAGAWIRLCVGKGRKVLVLSDRVALLSDLSTRLGDYTW---GFLTGSAKPADRKAAEGRDVILASYGCAAEGLDVPSLDTVLLLTPRSGEAVITQVVGRLFR--TGGMPPLVVDLVDGVPLFEGMHAKRRRIMRGMGGTVTDCDELRRP 1242
+E +R+ GGV+ L CGFGKT +L++ + I+VHT+ L QWK I Q+V +ASVG ++ D DV GR+HVIA +QSV+ R YP GLMI DE H V A LS V ++GC+ R+GLSATP R DG+ FL IGP+ RE ++ V + GP + + + GR NI+ M + CD +P R L I + + R ++VLSDR L + + L + GF+ G +PAD +AA VI+A+Y +EGLD+PSLDT + TPRS I Q GR+ R P V+D VD +F G KR + + DE +P
Sbjct: 99 VEKTIRALETAHGGVMSLYCGFGKTTCSLKVSCHFKKKTIILVHTTALLEQWKERIEQFVTNASVGVLQRDKIDVTGRSHVIALMQSVSRRNYPRELLDSFGLMIVDEAHHVCATQLSRCVTKVGCKLRLGLSATPFRKDGMTQFLFDSIGPICARVDREYE-EVFVDVVYVTSGPSEMVCVKRKGRLSPNIAKMINNLCDMHDPDGEFRTGLVIETIVNALAEDRHIIVLSDRRNHLKVMGSMLAETAGVEVGFMVGGTRPADIEAASACRVIMATYAYCSEGLDIPSLDTCVFATPRSD---IVQCCGRILRYHPSKQIPRVIDFVDNSVVFHGQARKRAMYYSKLCAFMNYLDEDLKP 455
BLAST of jgi.p|Trimin1|156795 vs. uniprot
Match: A0A7J7PL56_9CHLO (Type III restriction enzyme n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PL56_9CHLO) HSP 1 Score: 199 bits (505), Expect = 3.810e-55 Identity = 137/348 (39.37%), Postives = 187/348 (53.74%), Query Frame = 1
Query: 217 GGGVVVLPCGFGKTVAALELCRRMGVRAAIVVHTSVLAAQWKAAIAQYVPDASVGEIRADAFDVEGRTHVIASLQSVAFREYPPH---GCGLMIADERHRVAAPALSAAVARIGCRYRVGLSATPVRADGLHV-----FLGWCIGPVVHETRRESRRDLRAIAVRLDPGPVRTIS--ISKGGRRVDNISAMTSLTCDFSEPRAVRRQELAGAWIRLCVGKGRKVLVLSDRVA----LLSDLSTRLGDYTWGFLTGSAKPADRKAAEGR-DVILASYGCAAEGLDVPSLDTVLLLTPRSGEAVITQVVGRLFRTGGMPPLVVDLVDGVPLFEGMHAKRRRIMRGMGGTV 1215
GGG++VLP GFGKTV AL + +G R ++ H L QW IAQYVP A VG I+ DVEG+ V+ +QSV+ R+YP G GL I DE H ++AP S ++ + Y +GLSATP R DGL + W +GPV+ + RR+ + +AV P + + +GG ++ +T + D + R EL + I +GRKVL LSDR A L + L+ R G KPA+ AA D++LASYG A+EGLD+P+LDT++L TPRS I Q VGR+ R G PLVVD++D + + H KRR G V
Sbjct: 115 GGGLLVLPTGFGKTVCALWMACALGKRTLVLAHKGFLLDQWAERIAQYVPAARVGRIQQGTVDVEGKDIVLGMMQSVSMRDYPASVFDGFGLTIVDECHHISAPVFSRSMFKCTSHYMLGLSATPDRKDGLGPAGETPLMAWFLGPVIADRRRQGMPEDVRVAVHAYHCPQYDLPPPMMRGGATINLAKVVTGMVQDAA------RNELLVSAIAKLAAEGRKVLCLSDRRAHCKLLKALLAERCPLKEASLYLGGMKPAELAAAAATADILLASYGLASEGLDIPTLDTLVLSTPRSS---IEQAVGRILR-GAPNPLVVDVLDCLGVCYAQHNKRRAFYVACGFKV 452 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156795 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_921 ID=mRNA_921|Name=jgi.p|Trimin1|156795|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1278bp|location=Sequence derived from alignment at Contig_1:58785..60062- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGAGGTGCCCAAGGCGTGGGGGCTGGAGAGGCTCGCCGGCCCCGGGGGback to top protein sequence of jgi.p|Trimin1|156795 >Trimin1|156795|e_gw1.1.405.1 ID=Trimin1|156795|e_gw1.1.405.1|Name=jgi.p|Trimin1|156795|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=426bp MEVPKAWGLERLAGPGGAGARAGAGAGAEAVVDAQPPCAAASTPPLRLRAback to top mRNA from alignment at Contig_1:58785..60062- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_921 ID=mRNA_921|Name=jgi.p|Trimin1|156795|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1278bp|location=Sequence derived from alignment at Contig_1:58785..60062- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_1:58785..60062- >mRNA_921 ID=mRNA_921|Name=jgi.p|Trimin1|156795|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1278bp|location=Sequence derived from alignment at Contig_1:58785..60062- (Tribonema minus UTEX_B_3156 )back to top |