mRNA_9148 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|166496
Unique Name	mRNA_9148
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|166496 vs. uniprot
Match: A0A836CE47_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE47_9STRA)

HSP 1 Score: 685 bits (1768), Expect = 6.380e-249
Identity = 348/348 (100.00%), Postives = 348/348 (100.00%), Query Frame = 1

Query:    1 RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRLCKPRSAGAKLQRVCEKDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAYVTYAAIMLLMYPLGIPAIFAWMIRLGAADVRERSALASATSFLRKPYSPHACYWECAECLRRLLLAGLLVFIMPGTAGQTAMACVFAVLAGMVYESVRPHEETGEEFLYRLGYGIIAASMFTSLLIQVKYVDEYSQNAIGKLLIALNVILLAAAFTQAFLVYRKVRTTAGPIRQNSCFGLRRHDTPRLQEVEPAPTS 1044
            RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRLCKPRSAGAKLQRVCEKDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAYVTYAAIMLLMYPLGIPAIFAWMIRLGAADVRERSALASATSFLRKPYSPHACYWECAECLRRLLLAGLLVFIMPGTAGQTAMACVFAVLAGMVYESVRPHEETGEEFLYRLGYGIIAASMFTSLLIQVKYVDEYSQNAIGKLLIALNVILLAAAFTQAFLVYRKVRTTAGPIRQNSCFGLRRHDTPRLQEVEPAPTS
Sbjct:    1 RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRLCKPRSAGAKLQRVCEKDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAYVTYAAIMLLMYPLGIPAIFAWMIRLGAADVRERSALASATSFLRKPYSPHACYWECAECLRRLLLAGLLVFIMPGTAGQTAMACVFAVLAGMVYESVRPHEETGEEFLYRLGYGIIAASMFTSLLIQVKYVDEYSQNAIGKLLIALNVILLAAAFTQAFLVYRKVRTTAGPIRQNSCFGLRRHDTPRLQEVEPAPTS 348

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BLAST of jgi.p|Trimin1|166496 vs. uniprot
Match: A0A835Z2L6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2L6_9STRA)

HSP 1 Score: 631 bits (1627), Expect = 5.410e-218
Identity = 324/348 (93.10%), Postives = 331/348 (95.11%), Query Frame = 1

Query:    1 RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRLCKPRSAGAKLQRVCEKDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAYVTYAAIMLLMYPLGIPAIFAWMIRLGAADVRERSALASATSFLRKPYSPHACYWECAECLRRLLLAGLLVFIMPGTAGQTAMACVFAVLAGMVYESVRPHEETGEEFLYRLGYGIIAASMFTSLLIQVKYVDEYSQNAIGKLLIALNVILLAAAFTQAFLVYRKVRTTAGPIRQNSCFGLRRHDTPRLQEVEPAPTS 1044
            RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYR C+PRSAGAKLQRVCE+DLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAYVTYAAIMLL+YPLGIPAIFAWMIRLGAADVRERSALASATSFLRKPYSP   YWECAECLRRLLLAGLLVFIMPGTAGQTA+ACVFA LAG+VYESVRPHEE GEE LYRLGY IIAASMFTSLLIQVKYVDEYSQNAIG LLIALNVILL AAFTQAFLVYRKV+TTAGPIRQNS  GLR+ DT    EVEPAPTS
Sbjct:  644 RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRRCRPRSAGAKLQRVCEQDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAYVTYAAIMLLVYPLGIPAIFAWMIRLGAADVRERSALASATSFLRKPYSPQTSYWECAECLRRLLLAGLLVFIMPGTAGQTAVACVFASLAGVVYESVRPHEERGEESLYRLGYSIIAASMFTSLLIQVKYVDEYSQNAIGNLLIALNVILLVAAFTQAFLVYRKVKTTAGPIRQNSWLGLRKRDTLHPPEVEPAPTS 991

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BLAST of jgi.p|Trimin1|166496 vs. uniprot
Match: A0A836CA63_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA63_9STRA)

HSP 1 Score: 625 bits (1613), Expect = 2.470e-215
Identity = 322/348 (92.53%), Postives = 329/348 (94.54%), Query Frame = 1

Query:    1 RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRLCKPRSAGAKLQRVCEKDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAYVTYAAIMLLMYPLGIPAIFAWMIRLGAADVRERSALASATSFLRKPYSPHACYWECAECLRRLLLAGLLVFIMPGTAGQTAMACVFAVLAGMVYESVRPHEETGEEFLYRLGYGIIAASMFTSLLIQVKYVDEYSQNAIGKLLIALNVILLAAAFTQAFLVYRKVRTTAGPIRQNSCFGLRRHDTPRLQEVEPAPTS 1044
            RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYR C+PRSAGAKLQRVCE+DLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAYVTYA IMLL+YPLGIPAIFAWMIRLGAADVRERSALASATSFLRKPYSP   YWECAECLRRLLLAGLLVFIMPGTAGQTA+ACVFA LAGMVYESVRPHEE GEE LYRLGYGIIAASMFTSLLIQVK VD+YSQNAIG LLIALNVILL AAFTQAFLVYRKV+TTAGPIRQNS  GLR+ DT   QEVE  PTS
Sbjct:  687 RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRRCRPRSAGAKLQRVCEQDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAYVTYAVIMLLVYPLGIPAIFAWMIRLGAADVRERSALASATSFLRKPYSPQTSYWECAECLRRLLLAGLLVFIMPGTAGQTAVACVFASLAGMVYESVRPHEEAGEECLYRLGYGIIAASMFTSLLIQVKNVDDYSQNAIGNLLIALNVILLVAAFTQAFLVYRKVKTTAGPIRQNSWLGLRKRDTLHPQEVELPPTS 1034

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BLAST of jgi.p|Trimin1|166496 vs. uniprot
Match: A0A835YQ60_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ60_9STRA)

HSP 1 Score: 617 bits (1591), Expect = 1.030e-213
Identity = 318/350 (90.86%), Postives = 327/350 (93.43%), Query Frame = 1

Query:    1 RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRLCKPRSAGAKLQRVCEKDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAYVTYAAIMLLMYPLGIPAIFAWMIRLGAADVRERSALASATSFLRKPYSPHACYWECAECLRRLLLAGLLVFIMPGTAGQTAMACVFAVLAGMVYESVRPHEETGEEFLYRLGYGIIAASMFTSLLIQVKYVDEYSQNAIGKLLIALNVILLAAAFTQAFLVYRKVRTTAGP--IRQNSCFGLRRHDTPRLQEVEPAPTS 1044
            RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSP CVLHLSFYQRLLLTTLVPLGIAGVI APRAYR C+PRS GAKLQRVCE+DLHVLLVFAFLVYSGVSLTIFQTFACD LEYDGPDGTWYLRADY IQCRTPEH AY  YAA+MLL+YPLGIPA FAWMIRLGAADVRERSAL +ATSFLRKPYS HA YWECAECLRRLLLAGLLVFIMPG AGQTAMACVFAV AGMVYESVRPHEETGEE+LYRLGYGIIAASM TSLLIQVKYVDEYSQ+AIGKLLIALNVILL AAFTQAFLVYRKV+TTAGP  IRQNS  GLRR +TP LQEVEPAPTS
Sbjct:  554 RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPECVLHLSFYQRLLLTTLVPLGIAGVIFAPRAYRWCRPRSVGAKLQRVCEQDLHVLLVFAFLVYSGVSLTIFQTFACDNLEYDGPDGTWYLRADYRIQCRTPEHAAYGIYAAVMLLVYPLGIPAAFAWMIRLGAADVRERSALTAATSFLRKPYSSHASYWECAECLRRLLLAGLLVFIMPGEAGQTAMACVFAVFAGMVYESVRPHEETGEEWLYRLGYGIIAASMLTSLLIQVKYVDEYSQDAIGKLLIALNVILLVAAFTQAFLVYRKVKTTAGPWAIRQNSWLGLRRRETPHLQEVEPAPTS 903

[Close]

BLAST of jgi.p|Trimin1|166496 vs. uniprot
Match: A0A836CAK9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK9_9STRA)

HSP 1 Score: 614 bits (1584), Expect = 2.740e-212
Identity = 313/348 (89.94%), Postives = 328/348 (94.25%), Query Frame = 1

Query:    1 RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRLCKPRSAGAKLQRVCEKDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAYVTYAAIMLLMYPLGIPAIFAWMIRLGAADVRERSALASATSFLRKPYSPHACYWECAECLRRLLLAGLLVFIMPGTAGQTAMACVFAVLAGMVYESVRPHEETGEEFLYRLGYGIIAASMFTSLLIQVKYVDEYSQNAIGKLLIALNVILLAAAFTQAFLVYRKVRTTAGPIRQNSCFGLRRHDTPRLQEVEPAPTS 1044
            RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYR C+PRSAGAKLQRVCE+D+HVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAY+TYAAIMLL+YPLGIPA+F W+IRLGAADV +RS LASATSFLRKPYSP A YWECAECLRRLLLAGLLVFIMPGTAGQTA+ACVFA LAGMVYESVRPHEE GEE+LYRLGYGIIAASMFTSLLIQVKYVD+YSQNAIG LLI+LNVILL AAFTQAFLV+RKV+ TAGPIRQNS  GLR+ D    QEVE  PTS
Sbjct:  584 RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRRCRPRSAGAKLQRVCEQDMHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAYLTYAAIMLLVYPLGIPALFVWLIRLGAADVCDRSGLASATSFLRKPYSPQASYWECAECLRRLLLAGLLVFIMPGTAGQTAVACVFASLAGMVYESVRPHEEAGEEWLYRLGYGIIAASMFTSLLIQVKYVDDYSQNAIGNLLISLNVILLVAAFTQAFLVHRKVKMTAGPIRQNSWLGLRKRDMLHPQEVELPPTS 931

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BLAST of jgi.p|Trimin1|166496 vs. uniprot
Match: A0A836CCX9_9STRA (Uncharacterized protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCX9_9STRA)

HSP 1 Score: 557 bits (1435), Expect = 1.430e-186
Identity = 286/354 (80.79%), Postives = 314/354 (88.70%), Query Frame = 1

Query:    1 RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRLCKPRSAGAKLQRVCEKDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAYVTYAAIMLLMYPLGIPAIFAWMIRLGAADVRERS---ALASATSFLRKPYSPHACYWECAECLRRLLLAGLLVFIMPGTAGQTAMACVFAVLAGMVYESVRPHEETGEEFLYRLGYGIIAASMFTSLLIQVKYVDEYSQNAIGKLLIALNVILLAAAFTQAFLVYRKVRTTAGPIRQNSCFGLRRHDTPRLQE---VEPAPTS 1044
            RTP+IVMQILTQFVSITGV LPLQYLDFLQVM  +SLDLRWLTSPGCVLHLSFYQRLL++TLVPLGIAGVILAPR +R C+PR   A+LQ V EKDLH+LLVFAFL+YSGVSLT+FQTFACD L+YDGP+GT++LRADYTIQCRTPEHTAY+ YAAIMLL+YPLGIPA+FA  IRLG    RE      LA+ATSFLRKPYS HA YWECAECLRRLLLAGLLVFIMPGTAGQTA+ACVFAVLAGMVYESV PH+E GEE LYRLGYGIIAASMFTSLLIQ KYVDEYSQ+AIGKLLIALNV+L+ +AF QAFLVYRKVR T GP+RQ+S FGLR+H + RLQE   VEPAPTS
Sbjct:  859 RTPIIVMQILTQFVSITGVTLPLQYLDFLQVMTFMSLDLRWLTSPGCVLHLSFYQRLLMSTLVPLGIAGVILAPRTFRWCRPRFTSARLQHVYEKDLHLLLVFAFLIYSGVSLTVFQTFACDLLKYDGPNGTYFLRADYTIQCRTPEHTAYMIYAAIMLLVYPLGIPAMFALTIRLGVIHSRECDRPRVLAAATSFLRKPYSAHASYWECAECLRRLLLAGLLVFIMPGTAGQTAVACVFAVLAGMVYESVGPHQEAGEESLYRLGYGIIAASMFTSLLIQAKYVDEYSQDAIGKLLIALNVLLMVSAFVQAFLVYRKVRMTTGPVRQSSLFGLRKHSSARLQEINDVEPAPTS 1212

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BLAST of jgi.p|Trimin1|166496 vs. uniprot
Match: A0A835YUK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUK8_9STRA)

HSP 1 Score: 453 bits (1165), Expect = 7.850e-148
Identity = 228/243 (93.83%), Postives = 235/243 (96.71%), Query Frame = 1

Query:    1 RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRLCKPRSAGAKLQRVCEKDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAYVTYAAIMLLMYPLGIPAIFAWMIRLGAADVRERSALASATSFLRKPYSPHACYWECAECLRRLLLAGLLVFIMPGTAGQTAMACVFAVLAGM 729
            RT VIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRL+LTTLVPLGIAGVILAPRAYR C+PRSAGAKLQRVCE+DLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEH AYVTYAAIMLL+YPLGIPAIFAW+IRLGAADVRERSALASATSFLRKPYSP   YWECAECLRRLLLAGLL FIMPGTAGQTA+ACVFA LAG+
Sbjct:  822 RTSVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLVLTTLVPLGIAGVILAPRAYRRCRPRSAGAKLQRVCEQDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHAAYVTYAAIMLLVYPLGIPAIFAWLIRLGAADVRERSALASATSFLRKPYSPQTPYWECAECLRRLLLAGLLFFIMPGTAGQTAVACVFASLAGL 1064

[Close]

BLAST of jgi.p|Trimin1|166496 vs. uniprot
Match: A0A835ZAG3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAG3_9STRA)

HSP 1 Score: 426 bits (1096), Expect = 7.450e-145
Identity = 221/357 (61.90%), Postives = 278/357 (77.87%), Query Frame = 1

Query:    1 RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRLCKPRSA----GAKLQRVCEKDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPD--GTWYLRADYTIQCRTPEHTAYVTYAAIMLLMYPLGIPAIFAWMIRLG---AADVRERSALASATSFLRKPYSPHACYWECAECLRRLLLAGLLVFIMPGTAGQTAMACVFAVLAGMVYESVRPHEETGEEFLYRLGYGIIAASMFTSLLIQVKYVDEYSQNAIGKLLIALNVILLAAAFTQAFLVYRKVRTTAGPIRQNSCFGLRRHDTPRLQEVEPAPTS 1044
            RTPVIV+Q+LTQFVSITGV +P  YL+FL V+D+++LDLRWL S GC++ L+FYQRL L+TLVPLGIA ++LAPRAY  C+ RS     G KL+R  EKDL++LLVFAFL++SGVSLT+FQTF C+ L YDGP   GT YL ADY+++C TP HTAY  YA +M+ +YP+GIPA+FA +IR G   + D  + + L +ATSFLRKPY+  A YWECAECLRRL+L  LL+FIMPGTAGQTA+ACVFA+  G+VYES RPH E G+E LYRLGY II+A+MFTSLL+QVKYVD YSQ+ IG LL+ LNV+LL  A  Q+ LV+R V+  A P++QNS FG+RR    R   ++ AP+S
Sbjct:  112 RTPVIVLQVLTQFVSITGVPVPSVYLEFLHVVDVLTLDLRWLPSAGCLVRLNFYQRLCLSTLVPLGIAVLLLAPRAYLWCRTRSGRSFVGVKLRRFVEKDLNILLVFAFLIFSGVSLTVFQTFVCETLNYDGPQAGGTSYLLADYSLECGTPRHTAYTVYAVVMVAVYPIGIPAMFAVIIRQGVRTSGDGDQPAMLTAATSFLRKPYAASARYWECAECLRRLMLTTLLMFIMPGTAGQTAVACVFALFTGIVYESFRPHRERGDEMLYRLGYSIISATMFTSLLMQVKYVDAYSQSVIGVLLVVLNVLLLLMALAQSILVFRGVKALAHPVQQNSWFGIRRASE-RSGGIDAAPSS 467

[Close]

BLAST of jgi.p|Trimin1|166496 vs. uniprot
Match: A0A835YI67_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI67_9STRA)

HSP 1 Score: 379 bits (973), Expect = 3.140e-122
Identity = 199/341 (58.36%), Postives = 248/341 (72.73%), Query Frame = 1

Query:    1 RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPR----AYRLCKPRSAGAKLQRVCEKDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAYVTYAAIMLLMYPLGIPAIFAWMIRLGAADVRERSA----LASATSFLRKPYSPH--ACYWECAECLRRLLLAGLLVFIMPGTAGQTAMACVFAVLAGMVYESVRPHEETGEEFLYRLGYGIIAASMFTSLLIQVKYVDEYSQNAIGKLLIALNVILLAAAFTQAFLVYRKVRTTAGPIRQNSCFGL 993
            R P+IV+Q+LTQF+SITG++LP  YL FL+ MD+++LD+RWLTSPGC L + FYQ+LL++TL PL +  +I  PR    A R  +     AKLQRV  KD +  LVF FL++SGVSLTIF+TFACD+L YDGPDGT YLRADY++QC TPEHTAY  YAAIM+L+YP GIPA++  ++R  A +  ER A     A++ SFL +PY+    A YWE  EC+RRLLL G+LVFI  GTAGQ+A ACVFA L+G+VYE VRPHE +G+  LY LGY I+  SMFTSLL+QV + DE SQ  +G LLIALNVILLA A  Q FLVY  V     P+R+NS   L
Sbjct:  413 RIPIIVLQLLTQFISITGLSLPPDYLKFLRAMDVLTLDMRWLTSPGCALTIGFYQKLLISTLAPLAVVALIFTPRLCVSAARRGRRACGSAKLQRVAAKDFNAFLVFTFLIFSGVSLTIFETFACDFLRYDGPDGTSYLRADYSVQCFTPEHTAYRIYAAIMILVYPFGIPAMYCLVLRRCAVEKGERRAESSRFATSASFLWRPYNKDGLAFYWESIECVRRLLLTGVLVFIDAGTAGQSAFACVFAFLSGVVYEQVRPHESSGDRSLYTLGYSIVFISMFTSLLLQVTFKDEQSQQVVGILLIALNVILLALALAQVFLVYSSVAAADLPLRRNSTLPL 753

[Close]

BLAST of jgi.p|Trimin1|166496 vs. uniprot
Match: A0A835ZGI9_9STRA (Beta_helix domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGI9_9STRA)

HSP 1 Score: 372 bits (956), Expect = 1.450e-119
Identity = 195/336 (58.04%), Postives = 245/336 (72.92%), Query Frame = 1

Query:    1 RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRLCKPRSAGA--KLQRVCEKDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAYVTYAAIMLLMYPLGIPAIFAWMIRLGAADVR---ERSALASATSFLRKPYSPHACYWECAECLRRLLLAGLLVFIMPGTAGQTAMACVFAVLAGMVYESVRPHEETGEEFLYRLGYGIIAASMFTSLLIQVKYVDEYSQNAIGKLLIALNVILLAAAFTQAFLVYRKVRTTAGPIRQNSCFGL 993
            R P++V+Q+LTQ+VSITG++LPLQYL FL+ +D +SLDLRWLTSPGC +HL FY RLLLTTL PL    +I  PR Y     R      KL+++  KD++V LVF FL++SGVSL +F+TF CD     G     YLRADY+++C T  HTA+  YA +M+L+YP+GIP ++A ++R  A   R   + S  A+A SFL +PY   A YWECAEC RRL+LAG LVFI+PGTAGQ+A+ACVFAV  GMVYE +RPH+E  +++LY LGYGII ASMFTSLL+Q  Y+D  S+ AIG+LLIALNV+LLA A TQ  LVYR VR    PIRQNS FGL
Sbjct:  455 RIPIVVLQVLTQYVSITGISLPLQYLRFLRAIDFLSLDLRWLTSPGCAVHLDFYGRLLLTTLAPLVATALIFLPRLYVWTMSRRGRTCPKLRQLIAKDVNVFLVFTFLIFSGVSLRVFETFGCD-----GSLSRSYLRADYSLECGTSRHTAFSVYAGVMVLVYPVGIPLLYAAVLRHSAVTHRAGGQASRYATAASFLWRPYRGRAYYWECAECFRRLILAGFLVFILPGTAGQSAVACVFAVFTGMVYEQIRPHQEPMDKWLYTLGYGIIFASMFTSLLMQANYIDGSSEQAIGRLLIALNVLLLAMALTQMALVYRSVRDADRPIRQNSFFGL 785

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|166496 vs. uniprot

BLAST of jgi.p|Trimin1|166496 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CE47_9STRA	6.380e-249	100.00	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835Z2L6_9STRA	5.410e-218	93.10	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CA63_9STRA	2.470e-215	92.53	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YQ60_9STRA	1.030e-213	90.86	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CAK9_9STRA	2.740e-212	89.94	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CCX9_9STRA	1.430e-186	80.79	Uncharacterized protein n=3 Tax=Tribonema minus Ta...	[more]
A0A835YUK8_9STRA	7.850e-148	93.83	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZAG3_9STRA	7.450e-145	61.90	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YI67_9STRA	3.140e-122	58.36	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZGI9_9STRA	1.450e-119	58.04	Beta_helix domain-containing protein n=1 Tax=Tribo...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_44	contig	Contig_44:933006..934052 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|166496\|e_gw1.44.130.1
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2BFIX@1\|root,2S176@2759\|Eukaryota
Evalue	1.38e-57
Seed ortholog	2880.D7G2Z8
Hectar predicted targeting category	signal peptide
TranscriptId	166818
Track	FilteredModels1
ProteinId	166496

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|166496	gene_9148	Tribonema minus UTEX_B_3156	gene	Contig_44 933006..934052 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_9148_1	exon_9148_1	Tribonema minus UTEX_B_3156	exon	Contig_44 933006..934052 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_9148	CDS_9148	Tribonema minus UTEX_B_3156	CDS	Contig_44 933006..934052 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|166496	Trimin1\|166496\|e_gw1.44.130.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_44 933006..934052 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_44:933006..934052-
coding sequence from alignment at Contig_44:933006..934052-

spliced messenger RNA

>mRNA_9148 ID=mRNA_9148|Name=jgi.p|Trimin1|166496|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1047bp|location=Sequence derived from alignment at Contig_44:933006..934052- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGGACCCCCGTCATCGTGATGCAGATCCTAACCCAGTTCGTCAGCATCAC
CGGCGTCGCCCTGCCGCTGCAGTACCTAGACTTCCTGCAGGTCATGGACC
TGATCTCGCTGGACCTGCGGTGGCTGACTTCTCCTGGGTGCGTCCTGCAC
CTCAGCTTCTACCAAAGACTGCTCCTGACAACGCTCGTCCCGCTGGGTAT
AGCCGGAGTCATCCTCGCTCCGCGGGCGTACCGCCTGTGCAAACCGCGAT
CCGCCGGCGCCAAACTGCAGCGCGTGTGCGAGAAGGACTTGCACGTTCTG
CTGGTGTTCGCCTTCCTCGTCTACTCGGGCGTCTCCCTGACGATTTTCCA
GACCTTTGCATGCGACTACCTCGAGTACGACGGCCCCGACGGCACGTGGT
ACCTCCGCGCGGACTACACGATCCAGTGCCGCACGCCGGAACACACGGCG
TACGTCACCTATGCCGCGATCATGTTGCTGATGTACCCGCTCGGCATCCC
TGCGATATTCGCCTGGATGATAAGGCTGGGCGCCGCCGACGTCCGCGAGC
GCTCTGCGCTGGCATCCGCGACTTCCTTCCTGCGCAAGCCCTACTCACCT
CACGCTTGCTATTGGGAGTGTGCGGAATGCTTGCGACGGCTGCTTCTCGC
CGGCCTGCTCGTCTTCATCATGCCCGGCACAGCGGGACAAACAGCGATGG
CGTGCGTCTTCGCTGTGTTGGCGGGCATGGTGTACGAGTCCGTCCGACCT
CACGAGGAGACGGGCGAGGAGTTCTTGTACAGACTCGGCTACGGTATTAT
CGCGGCGAGCATGTTCACTTCGCTGTTGATACAGGTAAAGTACGTCGACG
AGTACAGCCAGAACGCCATCGGCAAGCTGCTCATAGCGCTTAATGTGATT
TTGTTAGCTGCGGCGTTTACTCAGGCGTTCCTCGTTTACCGCAAAGTCCG
GACGACTGCCGGCCCCATTCGTCAAAATTCCTGCTTCGGGCTGCGCAGGC
ACGACACGCCGCGCCTACAAGAAGTGGAGCCGGCCCCCACTTCTTGA

protein sequence of jgi.p|Trimin1|166496

>Trimin1|166496|e_gw1.44.130.1 ID=Trimin1|166496|e_gw1.44.130.1|Name=jgi.p|Trimin1|166496|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=349bp
RTPVIVMQILTQFVSITGVALPLQYLDFLQVMDLISLDLRWLTSPGCVLH
LSFYQRLLLTTLVPLGIAGVILAPRAYRLCKPRSAGAKLQRVCEKDLHVL
LVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTA
YVTYAAIMLLMYPLGIPAIFAWMIRLGAADVRERSALASATSFLRKPYSP
HACYWECAECLRRLLLAGLLVFIMPGTAGQTAMACVFAVLAGMVYESVRP
HEETGEEFLYRLGYGIIAASMFTSLLIQVKYVDEYSQNAIGKLLIALNVI
LLAAAFTQAFLVYRKVRTTAGPIRQNSCFGLRRHDTPRLQEVEPAPTS*

mRNA from alignment at Contig_44:933006..934052-

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_9148 ID=mRNA_9148|Name=jgi.p|Trimin1|166496|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1047bp|location=Sequence derived from alignment at Contig_44:933006..934052- (Tribonema minus UTEX_B_3156 )
CGGACCCCCGTCATCGTGATGCAGATCCTAACCCAGTTCGTCAGCATCAC
CGGCGTCGCCCTGCCGCTGCAGTACCTAGACTTCCTGCAGGTCATGGACC
TGATCTCGCTGGACCTGCGGTGGCTGACTTCTCCTGGGTGCGTCCTGCAC
CTCAGCTTCTACCAAAGACTGCTCCTGACAACGCTCGTCCCGCTGGGTAT
AGCCGGAGTCATCCTCGCTCCGCGGGCGTACCGCCTGTGCAAACCGCGAT
CCGCCGGCGCCAAACTGCAGCGCGTGTGCGAGAAGGACTTGCACGTTCTG
CTGGTGTTCGCCTTCCTCGTCTACTCGGGCGTCTCCCTGACGATTTTCCA
GACCTTTGCATGCGACTACCTCGAGTACGACGGCCCCGACGGCACGTGGT
ACCTCCGCGCGGACTACACGATCCAGTGCCGCACGCCGGAACACACGGCG
TACGTCACCTATGCCGCGATCATGTTGCTGATGTACCCGCTCGGCATCCC
TGCGATATTCGCCTGGATGATAAGGCTGGGCGCCGCCGACGTCCGCGAGC
GCTCTGCGCTGGCATCCGCGACTTCCTTCCTGCGCAAGCCCTACTCACCT
CACGCTTGCTATTGGGAGTGTGCGGAATGCTTGCGACGGCTGCTTCTCGC
CGGCCTGCTCGTCTTCATCATGCCCGGCACAGCGGGACAAACAGCGATGG
CGTGCGTCTTCGCTGTGTTGGCGGGCATGGTGTACGAGTCCGTCCGACCT
CACGAGGAGACGGGCGAGGAGTTCTTGTACAGACTCGGCTACGGTATTAT
CGCGGCGAGCATGTTCACTTCGCTGTTGATACAGGTAAAGTACGTCGACG
AGTACAGCCAGAACGCCATCGGCAAGCTGCTCATAGCGCTTAATGTGATT
TTGTTAGCTGCGGCGTTTACTCAGGCGTTCCTCGTTTACCGCAAAGTCCG
GACGACTGCCGGCCCCATTCGTCAAAATTCCTGCTTCGGGCTGCGCAGGC
ACGACACGCCGCGCCTACAAGAAGTGGAGCCGGCCCCCACTTCTTGA

Coding sequence (CDS) from alignment at Contig_44:933006..934052-

>mRNA_9148 ID=mRNA_9148|Name=jgi.p|Trimin1|166496|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1047bp|location=Sequence derived from alignment at Contig_44:933006..934052- (Tribonema minus UTEX_B_3156 )
CGGACCCCCGTCATCGTGATGCAGATCCTAACCCAGTTCGTCAGCATCAC
CGGCGTCGCCCTGCCGCTGCAGTACCTAGACTTCCTGCAGGTCATGGACC
TGATCTCGCTGGACCTGCGGTGGCTGACTTCTCCTGGGTGCGTCCTGCAC
CTCAGCTTCTACCAAAGACTGCTCCTGACAACGCTCGTCCCGCTGGGTAT
AGCCGGAGTCATCCTCGCTCCGCGGGCGTACCGCCTGTGCAAACCGCGAT
CCGCCGGCGCCAAACTGCAGCGCGTGTGCGAGAAGGACTTGCACGTTCTG
CTGGTGTTCGCCTTCCTCGTCTACTCGGGCGTCTCCCTGACGATTTTCCA
GACCTTTGCATGCGACTACCTCGAGTACGACGGCCCCGACGGCACGTGGT
ACCTCCGCGCGGACTACACGATCCAGTGCCGCACGCCGGAACACACGGCG
TACGTCACCTATGCCGCGATCATGTTGCTGATGTACCCGCTCGGCATCCC
TGCGATATTCGCCTGGATGATAAGGCTGGGCGCCGCCGACGTCCGCGAGC
GCTCTGCGCTGGCATCCGCGACTTCCTTCCTGCGCAAGCCCTACTCACCT
CACGCTTGCTATTGGGAGTGTGCGGAATGCTTGCGACGGCTGCTTCTCGC
CGGCCTGCTCGTCTTCATCATGCCCGGCACAGCGGGACAAACAGCGATGG
CGTGCGTCTTCGCTGTGTTGGCGGGCATGGTGTACGAGTCCGTCCGACCT
CACGAGGAGACGGGCGAGGAGTTCTTGTACAGACTCGGCTACGGTATTAT
CGCGGCGAGCATGTTCACTTCGCTGTTGATACAGGTAAAGTACGTCGACG
AGTACAGCCAGAACGCCATCGGCAAGCTGCTCATAGCGCTTAATGTGATT
TTGTTAGCTGCGGCGTTTACTCAGGCGTTCCTCGTTTACCGCAAAGTCCG
GACGACTGCCGGCCCCATTCGTCAAAATTCCTGCTTCGGGCTGCGCAGGC
ACGACACGCCGCGCCTACAAGAAGTGGAGCCGGCCCCCACTTCTTGA