mRNA_9096 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|166382 vs. uniprot
Match: A0A835YST1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YST1_9STRA) HSP 1 Score: 558 bits (1437), Expect = 4.610e-201 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1 Query: 1 MRGRWCWLAALPALSAGHRALAVQHHIAAPQGAKRVLLLDVDGTLYGPEAGVEQQIVANIHRFVEQELSITPQQCDQLHHRQVNDGPKDALYGSTIEGLQAEGLVTPAQVQAFYHSVYKDIDLSGLYPQYSSSSRGDATGYRHRIGWTRLLRHVPCSKYVASNSPRRHVLRVLRALGLADVHWSGILCPDTTGGFTKANPLFYQRVVESHPVEQGWQVTLVDDSRANLEVARAGCGFEAVLLAPHEATSEDHCTHSEVMDRAADLPTALAR 813 MRGRWCWLAALPALSAGHRALAVQHHIAAPQGAKRVLLLDVDGTLYGPEAGVEQQIVANIHRFVEQELSITPQQCDQLHHRQVNDGPKDALYGSTIEGLQAEGLVTPAQVQAFYHSVYKDIDLSGLYPQYSSSSRGDATGYRHRIGWTRLLRHVPCSKYVASNSPRRHVLRVLRALGLADVHWSGILCPDTTGGFTKANPLFYQRVVESHPVEQGWQVTLVDDSRANLEVARAGCGFEAVLLAPHEATSEDHCTHSEVMDRAADLPTALAR Sbjct: 1 MRGRWCWLAALPALSAGHRALAVQHHIAAPQGAKRVLLLDVDGTLYGPEAGVEQQIVANIHRFVEQELSITPQQCDQLHHRQVNDGPKDALYGSTIEGLQAEGLVTPAQVQAFYHSVYKDIDLSGLYPQYSSSSRGDATGYRHRIGWTRLLRHVPCSKYVASNSPRRHVLRVLRALGLADVHWSGILCPDTTGGFTKANPLFYQRVVESHPVEQGWQVTLVDDSRANLEVARAGCGFEAVLLAPHEATSEDHCTHSEVMDRAADLPTALAR 271
BLAST of jgi.p|Trimin1|166382 vs. uniprot
Match: A0A6H5L623_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L623_9PHAE) HSP 1 Score: 165 bits (417), Expect = 6.740e-44 Identity = 92/206 (44.66%), Postives = 125/206 (60.68%), Query Frame = 1 Query: 100 KRVLLLDVDGTLYGPEAGVEQQIVANIHRFVEQELSITPQQCDQLHHRQVNDGPKDALYGSTIEGLQAEGLVTPAQVQAFYHSVYKDIDLSGLYPQYSSSSRGDATGYRHRIGWTRLLRHVPCSK----YVASNSPRRHVLRVLRALGLADVHWSGILCPDTTGGFTKANPLFYQRVVESHPVEQGW----QVTLVDDSRANLEVA 693 +RVL+LDVDGTLYG +GVEQQIV IHR+ EL +TP++C+ +H R +GST+ GLQ EG +T QV+ +Y V+ + + GL S GDATGY+HR R + CS +VASNSP HV RVL +GL +V ++G L PDT G TK++P FY ++E V++G + L+DDS NLEV+ Sbjct: 95 QRVLILDVDGTLYGQSSGVEQQIVDGIHRYFAGELGLTPEECNDIHRR----------HGSTVWGLQQEGRLTQHQVERYYQEVFSSVSVRGL--NAGDSGDGDATGYQHRAN----ARQIVCSHRGPVFVASNSPLPHVRRVLEGVGLGNVRFAGFLTPDTRGWLTKSSPEFYDPILEHASVKEGGTARQDIWLLDDSAVNLEVS 284
BLAST of jgi.p|Trimin1|166382 vs. uniprot
Match: B7G4N7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G4N7_PHATC) HSP 1 Score: 83.6 bits (205), Expect = 2.030e-14 Identity = 66/185 (35.68%), Postives = 92/185 (49.73%), Query Frame = 1 Query: 109 LLLDVDGTLY------GPEAGVEQQIVANIHRFVEQ---------ELSITPQQ-CDQLHHRQVNDGPKDALYGSTIEGLQA---EGLVT---PAQVQAFYHSVYKDIDLSGLYP-QYSSSSRGDA--TGYRHRIGWTR------LLRHVPCSKYVASNSPRRHVLRVLRALGLADVHWSGILCPD 570 L LDVD TLY G G+E QIV +H F E+ S +PQ+ D LH + YGSTIEGL+ + L+ A+++ FY VY+D+D++ L S S G A TGY H + LR+ P +ASNSP+RH+ +V++ALGL + W + PD Sbjct: 45 LWLDVDNTLYSESILSGIGRGIEAQIVRGVHEFYERFESDDTDKVAASASPQERADALHQQ----------YGSTIEGLRQTRWKNLLPNELSAKMRNFYERVYQDVDVTALLDTDRSRHSHGGASSTGYSHNAVAQQQTLLRDALRYSPVPVGLASNSPKRHISKVIQALGLTRIPWHAVCTPD 219
BLAST of jgi.p|Trimin1|166382 vs. uniprot
Match: A0A7C4X4X4_9SPIR (HAD family hydrolase n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A7C4X4X4_9SPIR) HSP 1 Score: 71.6 bits (174), Expect = 2.400e-11 Identity = 44/145 (30.34%), Postives = 75/145 (51.72%), Query Frame = 1 Query: 109 LLLDVDGTLYGPEAGVEQQIVANIHRFVEQELSITPQQCDQLHHRQVNDGPKDALYGSTIEGLQAEGLVTPAQVQAFYHSVYKDIDLSGLYPQYSSSSRGDATGYRHRIGWTRLLRHVPCSKYVASNSPRRHVLRVLRALGLADV 543 LL D+D TLY PE G+E ++VA ++ FV+Q L + ++C ++ ++ LYG+T+E L AE VT +A++ V+ D + + L P + L+ +P K++ +N+P H R+L L L+ V Sbjct: 5 LLFDLDNTLYSPEYGLEDEVVARMNEFVQQVLKKSLEECKRIRSERL------PLYGTTLEWLMAEHGVT--DYEAYFRFVHPDGEEAKLKPDPALKE---------------FLQSIPLPKFILTNAPMEHADRILAKLELSQV 126
BLAST of jgi.p|Trimin1|166382 vs. uniprot
Match: A0A2N6EI96_9DELT (Pyrimidine 5'-nucleotidase n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2N6EI96_9DELT) HSP 1 Score: 71.6 bits (174), Expect = 2.650e-11 Identity = 63/231 (27.27%), Postives = 106/231 (45.89%), Query Frame = 1 Query: 109 LLLDVDGTLYGPEAGVEQQIVANIHRFVEQELSITPQQCDQLHHRQVNDGPKDALYGSTIEGLQAEGLVTPAQVQAFYHSVYKDIDLSGLYPQYSSSSRGDATGYRHRIGWTRLLR--HVPCSKYVASNSPRRHVLRVLRALGLADVHWSGILCPDTTGGFTKANPLFYQRVVESHPVEQGWQVTLVDDSRANLEVARAGCGFEAVLLAPHEATSEDHCTHSEVMDRAADL 795 +L D+D TLY E + I I+R++E+ +SI P+ D L R +D YG+T++GL ++ P + H++ LS H LR +VPC ++ +N + H RV+ ALG+ ++ +S + G K NP Y++V+E+ + G + +V+DS NL A+ G + VL+ + H +DR AD+ Sbjct: 4 ILFDLDNTLYPAEKDLFSLIDVRINRYMEEIVSILPEDVDGLRRRYWSD------YGTTLQGLIHHHVIDPEDYLDYVHAIDVGQRLS------------------HDTDLQETLRELNVPC--FIFTNGSQGHARRVMSALGVDEL-FSDVFDIRIAGYVPKPNPAPYRKVMEALGIP-GERCVMVEDSCENLRTAKQ-LGMKTVLI----GQPQHHNFIDAHLDRPADI 201
BLAST of jgi.p|Trimin1|166382 vs. uniprot
Match: UPI0006C91827 (pyrimidine 5'-nucleotidase n=1 Tax=Thermanaerothrix daxensis TaxID=869279 RepID=UPI0006C91827) HSP 1 Score: 68.2 bits (165), Expect = 5.220e-10 Identity = 65/237 (27.43%), Postives = 101/237 (42.62%), Query Frame = 1 Query: 103 RVLLLDVDGTLYGPEAGVEQQIVANIHRFVEQELSITPQQCDQLHHRQVNDGPKDALYGSTIEGLQAEGLVTPAQVQAFYHSVYKDIDLSGLYPQYSSSSRGDATGYRHRIGWTRLLRHVPCSKYVASNSPRRHVLRVLRALGLADVHWSGILCPDTTGGFTKANPLFYQRVVESHPVEQGWQVTLVDDSRANLEVARAGCGFEAVLLAPHEATSEDHCTHSEVMDRAADLPTALAR 813 ++L+ D+D TLY GV + I I F+ Q+LS+ + + + YG+T+ GL + + P + AF H D+ L Y Q + R LL+ +P K + +N+ + H RVL LGL I D F K P +Q++++ Q L+DD ANL AR GF V ++ + H H + R +LP LA+ Sbjct: 4 KILIFDLDDTLYPASLGVWEAIAKRIDLFIHQKLSLPLENVEAFRKNLFHS------YGTTLRGLYLQYHIDPTEYLAFVH----DVPLED-YLQPNPELRT-------------LLKVLPYPKVIFTNADKNHANRVLARLGLEGCFRQIIDIWDMLP-FCKPFPEAFQKMLQKLEYPDTSQCLLIDDLPANLRTARR-LGFWTVQVSEN---GRQHAGHFHIR-RIEELPRVLAQ 210
BLAST of jgi.p|Trimin1|166382 vs. uniprot
Match: A0A0S8K651_9CHLR (Uncharacterized protein n=1 Tax=Anaerolineae bacterium SM23_84 TaxID=1703388 RepID=A0A0S8K651_9CHLR) HSP 1 Score: 64.7 bits (156), Expect = 8.700e-9 Identity = 62/208 (29.81%), Postives = 93/208 (44.71%), Query Frame = 1 Query: 103 RVLLLDVDGTLYGPEAGVEQQIVANIHRFVEQELSITPQQCDQLHHRQVNDGPKDALYGSTIEGLQAEGLVTPAQVQAFYHSVYKDIDLSGLYPQYSSSSRGDATGYRHRIGWTRLLRHVPCSKYVASNSPRRHVLRVLRALGLADVHWSGILCPDTTGGFTKANPLFYQRVVESHPVEQGWQVTLVDDSRANLEVARAGCGFEAVLL 726 R++L D+D TLY +GV QI A I R++ L + P ++L ++ YG+++ GLQ + P F H V+ D + L P S + D +L +P K + +N+ R H RVL LG+ H+ I+ +K NP Y RV VE + LV+DS NL A+ G VL+ Sbjct: 8 RIVLFDLDETLYPRSSGVMGQIRARILRYMIDRLKLDPDTAEELRMHYLH------TYGTSMRGLQIHHAIDPDD---FLHYVH-DFPIEELIPP---SPQLDT-----------ILGRLPLEKAIFTNASREHAERVLGWLGIGH-HFKRIVDVRDLRYVSKPNPEAYVRVCALLQVEPE-ECMLVEDSARNLRPAKE-LGMVTVLV 188
BLAST of jgi.p|Trimin1|166382 vs. uniprot
Match: A0A0L0H4Y4_SPIPD (Pyrimidine 5'-nucleotidase n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0H4Y4_SPIPD) HSP 1 Score: 64.3 bits (155), Expect = 1.280e-8 Identity = 53/201 (26.37%), Postives = 84/201 (41.79%), Query Frame = 1 Query: 97 AKRVLLLDVDGTLYGPEAGVEQQIVANIHRFVEQELSITPQQCDQLHHRQVNDGPKDALYGSTIEGLQAEGLVTPAQVQAFYHSVYKDIDLSGLYPQYSSSSRGDATGYRHRIGWTRLLRHVPCSKYVASNSPRRHVLRVLRALGLADVHWSGILCPDTTGGFT-KANPLFYQRVVESHPVEQGWQVTLVDDSRANLEVAR 696 A RV D+D LY G+ +++ IH + Q L + + +LHH+ + YG + GL V P A+ V + I L Y +Y RG G K+ +N+ + H +RVL LG+ D C + F K +P +Y + + + Q LVDDS AN+++A+ Sbjct: 7 ASRVFFFDIDNCLYAKSVGIYREMGKRIHAYF-QTLGLPDAEASRLHHKYYTE------YGLAVRGLVKHHNVDPI---AYDKVVDQSIPLE-KYLKYDQELRGMLEGMSG------------VKKWAFTNAYQVHAMRVLELLGIRDQFAGITFCDYSLPDFACKPDPRYYAQAMRDADISDPSQCYLVDDSAANIDMAK 184
BLAST of jgi.p|Trimin1|166382 vs. uniprot
Match: A0A1Q9DEE2_SYMMI (L-threonine 3-dehydrogenase n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DEE2_SYMMI) HSP 1 Score: 65.1 bits (157), Expect = 3.180e-8 Identity = 63/218 (28.90%), Postives = 100/218 (45.87%), Query Frame = 1 Query: 109 LLLDVDGTLYGPEAGVEQQIVANIHRFVEQELSITPQQCDQLHHRQVNDGPKDALYGSTIEGLQAEGLVTPAQVQAFYHSVYKDIDLSGLYPQYSSSSRGDATGYRHRIGWTRLLRHVPCSKYVASNSPRRHVLRVLRALGLAD--VHWSGILCPDTTGGF-TKANPLFYQRVVESHPVEQGWQVTLVDDSRANLEVARAGCGFEAVLLAPHEATSED 753 ++LD+DG LY A VE +IV + + E+ L + P +L +GST+ GL +EG ++ + AFY SVY +DL + P + + + LR S ++A+NSPR V RVL ALGL +H I+CP + K + F++ + + + DDS ++ A A + LL+ H S+D Sbjct: 35 MILDMDGVLY-KNAEVENEIVKRLGKATEK-LGLGPDAHQELFRS----------HGSTLRGLLSEGHLSGEAIAAFYSSVYDGVDLQAIQPDPLLALQ------------LKSLRAHGVSLWLATNSPRSFVDRVLEALGLESDLLH---IICPSPENHWINKPDARFFEMLPRA-------RAKFFDDSLGHVRAAVA-----SGLLSAHVRRSDD 213
BLAST of jgi.p|Trimin1|166382 vs. uniprot
Match: A0A812UQQ9_9DINO (Tdh protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UQQ9_9DINO) HSP 1 Score: 64.3 bits (155), Expect = 5.650e-8 Identity = 64/212 (30.19%), Postives = 97/212 (45.75%), Query Frame = 1 Query: 121 VDGTLYGPEAGVEQQIVANIHRFVEQELSITPQQCDQLHHRQVNDGPKDALYGSTIEGLQAEGLVTPAQVQAFYHSVYKDIDLSGLYPQYSSSSRGDATGYRHRIGWTRLLRHVPCSKYVASNSPRRHVLRVLRALGLADVHWSGILCPDTTGGFT-KANPLFYQRVVESHPVEQGWQVTLVDDSRANLEVARAGCGFEAVLLAPHEATSED 753 +DG LY A VE+ IV + + EQ L + P+ L +GSTI+GL +EG ++ V+ FY VY ++L L P + + + LR ++A+NSPR V RVL+ALGL + H I+CP + G+ K + F++ + + Q DDS ++ A A A L A H S+D Sbjct: 1 MDGVLY-KHAEVERDIVKRLGKATEQ-LGLGPEGHQDLFRS----------HGSTIQGLLSEGHLSGDAVEPFYSGVYDGVNLEALKPDPLLALQ------------LKSLRADDVCVWLATNSPRPFVDRVLQALGL-ESHLLRIVCPSSENGWVNKPDARFFEMLPRT-------QAKFFDDSLGHVRAAVA-----AGLPAVHVRRSDD 175 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|166382 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9096 ID=mRNA_9096|Name=jgi.p|Trimin1|166382|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=816bp|location=Sequence derived from alignment at Contig_44:550606..552404- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCGTGGAAGATGGTGCTGGCTGGCGGCGCTGCCAGCTCTCAGTGCTGGback to top protein sequence of jgi.p|Trimin1|166382 >Trimin1|166382|e_gw1.44.40.1 ID=Trimin1|166382|e_gw1.44.40.1|Name=jgi.p|Trimin1|166382|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=272bp MRGRWCWLAALPALSAGHRALAVQHHIAAPQGAKRVLLLDVDGTLYGPEAback to top mRNA from alignment at Contig_44:550606..552404- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9096 ID=mRNA_9096|Name=jgi.p|Trimin1|166382|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1799bp|location=Sequence derived from alignment at Contig_44:550606..552404- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_44:550606..552404- >mRNA_9096 ID=mRNA_9096|Name=jgi.p|Trimin1|166382|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=816bp|location=Sequence derived from alignment at Contig_44:550606..552404- (Tribonema minus UTEX_B_3156 )back to top |