mRNA_9029 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|163863
Unique NamemRNA_9029
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|163863 vs. uniprot
Match: A0A835Z794_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z794_9STRA)

HSP 1 Score: 545 bits (1404), Expect = 3.930e-196
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 1
Query:    1 MALSQKGKWAAALKAFEDAEAKHHKPTVSENRALLYALARDGGPAEAWAAVHRLRVLGALTAVDYEHALRAHEKPHHWSGALKLLSDMDKNEITWTVRACSHALLICGVAGRLNDALQLVEEMRKRGMRPGPVDFLHLIGECRRSRRKLRAAEDIWREMQRLKITPNTWSYSALINCYTVAGDPEKAEAVLAIMRQSTMAKPDAIAYNRYVQSTCSCLLWIQAAQVCAVCFECRTAWHYPLQPLAKQQCVLRATISSNPQVMSDMHAL 804
            MALSQKGKWAAALKAFEDAEAKHHKPTVSENRALLYALARDGGPAEAWAAVHRLRVLGALTAVDYEHALRAHEKPHHWSGALKLLSDMDKNEITWTVRACSHALLICGVAGRLNDALQLVEEMRKRGMRPGPVDFLHLIGECRRSRRKLRAAEDIWREMQRLKITPNTWSYSALINCYTVAGDPEKAEAVLAIMRQSTMAKPDAIAYNRYVQSTCSCLLWIQAAQVCAVCFECRTAWHYPLQPLAKQQCVLRATISSNPQVMSDMHAL
Sbjct:    1 MALSQKGKWAAALKAFEDAEAKHHKPTVSENRALLYALARDGGPAEAWAAVHRLRVLGALTAVDYEHALRAHEKPHHWSGALKLLSDMDKNEITWTVRACSHALLICGVAGRLNDALQLVEEMRKRGMRPGPVDFLHLIGECRRSRRKLRAAEDIWREMQRLKITPNTWSYSALINCYTVAGDPEKAEAVLAIMRQSTMAKPDAIAYNRYVQSTCSCLLWIQAAQVCAVCFECRTAWHYPLQPLAKQQCVLRATISSNPQVMSDMHAL 268          
BLAST of jgi.p|Trimin1|163863 vs. uniprot
Match: A0A835Z487_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z487_9STRA)

HSP 1 Score: 261 bits (666), Expect = 1.380e-79
Identity = 152/315 (48.25%), Postives = 176/315 (55.87%), Query Frame = 1
Query:    1 MALSQKGKWAAALKAFEDAEAKHHKPTVSENRALLYALARDGGPAEAWAAVHRLRVLGALTAVDYEHALRAHEKPHHWSGALKLLSDMDKNEITWTVRACSHALLICGVAGRLNDALQLVEEMRKRGMRPGPVDFLHLIGECRRSRRK--LRAA----------------------------------------------------------------------------------------------------EDIWREMQRLKITPNTWSYSALINCYTVAGDPEKAEAVLAIMRQSTMAKPDAIAYNRYVQS 639
            MAL  KGKW AA+KAF+DAEAKHHKPTVSENRALL+ALAR GG  E WAAV RL  LGALTA DYEHAL+AHEKP HWSGAL+LLS MDKN I WTVRACSHALL  G AGRLN ALQL+++M +RG+ P P ++L LI ECRR  +K  +R A                                                                                                    EDIWREMQRLK+TP+T SY A INCY VAG+P+KAE+VLA MRQS+M KP+AI YN  +++
Sbjct:  149 MALGHKGKWEAAVKAFQDAEAKHHKPTVSENRALLFALARGGGKDEVWAAVQRLSDLGALTAFDYEHALQAHEKPRHWSGALRLLSHMDKNNIKWTVRACSHALLTLGFAGRLNAALQLLQKMHQRGLSPDPANYLQLIAECRRHSKKALVRDAGDSRGGSKQAXXXXXXXXXXXXXXXXXXXSAAINVCGKAGDWAAAVHIFQQMQQKVKRAKKIDLMLTAYRSMLTSGQRPNVVTLTCILDQAGAAGECSITEDIWREMQRLKLTPDTQSYGACINCYAVAGEPDKAESVLAEMRQSSMTKPNAIVYNSVMKA 463          
BLAST of jgi.p|Trimin1|163863 vs. uniprot
Match: A0A835YZD3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZD3_9STRA)

HSP 1 Score: 221 bits (564), Expect = 4.210e-67
Identity = 114/188 (60.64%), Postives = 137/188 (72.87%), Query Frame = 1
Query:   16 KGKWAAALKAFEDAEAKHHKPTVSENRALLYALARDGGPAEAWAAVHRLRVLGALTAVDYEHALRAHEKPHHWSGALKLLSDMDKNEITWTVRACSHALLICGVAGRLNDALQLVEEMRKRGMRPGPVDFLHLIGECRRSRRKLRAAED----------IWREMQRLKITPNTWSYSALINCYTVAGD 549
            KGKW AA+KAF+DAEAKHHKPTVSE RALL ALAR GG  EAWAAVHRLR +GALT  DYE+AL+AHEKP HWSGALKLL  MD N I WTVRAC+HALL CG AGRLNDA QL+ +MR+RG+ P   D+L LIGEC RS +K+R A D          + + M++    P+   ++A+++    AGD
Sbjct:    3 KGKWEAAVKAFQDAEAKHHKPTVSEIRALLRALARGGGKGEAWAAVHRLRGMGALTVFDYEYALQAHEKPRHWSGALKLLKHMDANNIKWTVRACNHALLTCGFAGRLNDAFQLIRQMRERGINPASGDYLQLIGECVRSSKKVRDAGDSRGGSKQAMELLQLMKQTGAKPDVRHFTAVVDACGKAGD 190          
BLAST of jgi.p|Trimin1|163863 vs. uniprot
Match: A0A835Z0J2_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0J2_9STRA)

HSP 1 Score: 222 bits (565), Expect = 8.140e-66
Identity = 122/223 (54.71%), Postives = 158/223 (70.85%), Query Frame = 1
Query:    1 MALSQKGKWAAALKAFEDAEAKHHKPTVSENRALLYALARDGGPAEAWAAVHRLRVLGALTAVDYEHALRAHEKPHHWSGALKLLSDMDKNEITWTVRACSHALLICGVAGRLNDALQLVEEMRKRGMRPGPVDFLHLIGECRRS--RRKLRAAED----------IWREMQRLKITPNTWSYSALINCYTVAGDPEKAEAVLAIMRQSTMAKPDAIAYNRYV 633
            MAL++KGKW AA+KAF+DAEAKHHKPTVSENRALL+ALAR+G  A+AWAAVHRLR +GALTA DYE+AL+AHEK  HWSGAL+LLS MDK  I WT+RACSHALL  G AGR+N ALQL+++M +RG+ P P  +L LIGECRRS  R+K+R A D          + + M++    P+   ++A+++    AGD   A  V   M+   +  P+  +YN  +
Sbjct:   70 MALNRKGKWEAAVKAFQDAEAKHHKPTVSENRALLFALARNGNTADAWAAVHRLRGMGALTAFDYEYALQAHEKSRHWSGALRLLSHMDKKNIKWTIRACSHALLTLGFAGRMNAALQLLDKMCERGLSPHPDSYLQLIGECRRSSSRQKVRDAGDSRGGSKQAVAMLQHMKQTGTKPDIRHFTAVVDACGKAGDWIDALDVFQQMQLELV--PNVRSYNTLI 290          
BLAST of jgi.p|Trimin1|163863 vs. uniprot
Match: A0A836CJC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJC7_9STRA)

HSP 1 Score: 184 bits (467), Expect = 2.500e-55
Identity = 92/130 (70.77%), Postives = 104/130 (80.00%), Query Frame = 1
Query:   73 KPTVSENRALLYALARDGGPAEAWAAVHRLRVLGALTAVDYEHALRAHEKPHHWSGALKLLSDMDKNEITWTVRACSHALLICGVAGRLNDALQLVEEMRKRGMRPGPVDFLHLIGECRRSRRKLRAAED 462
            KPTVSE RALL+ALAR G   EA AAV RLR +GALTA DYE+AL+AHEKP HWSGAL+LLS MDKN I WTVRACSHALL CG AGRLNDA QL+++M   GMRP  V++L LIGECRR+  K+R A D
Sbjct:    1 KPTVSEVRALLFALARGGDTDEACAAVQRLRGMGALTAFDYEYALQAHEKPRHWSGALRLLSHMDKNNIKWTVRACSHALLTCGFAGRLNDAFQLIQQMHNHGMRPCAVNYLQLIGECRRNSNKVRDAGD 130          
BLAST of jgi.p|Trimin1|163863 vs. uniprot
Match: A0A835YWP6_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWP6_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.650e-40
Identity = 91/208 (43.75%), Postives = 114/208 (54.81%), Query Frame = 1
Query:  124 GGPAEAWAAVHRLRVLGALTAVDYEH---ALRAHEKPHHWSGALKLLSDMDKNEITWTVRACSHALLICGVAGRLNDALQLVEEMRKRGMRPGPVDFLHLIGECRRSRRKLRAAEDIWREMQRLKITPNTWSYSALINCYTVAGDPEKAEAVLAIMRQSTMAKPDAIAYNRYVQSTCSCLLWIQAAQVCAVCFECRTAWHYPLQPLAK 738
            GG A+A   +  +   G +   D++H   A+    K   W+ A+ +   M    +   +   +  L   G A +++  L    EM   G  P  V F  L+     +      AEDI REMQRLKI PNTW+Y AL NCY V G+PEKAEAVLA MRQSTM KP AIAYNRYV STCSCL  +       VCF+CRTAW + LQP AK
Sbjct:   35 GGSAQAMELLQLMEQPG-VEKPDFKHYSAAINVCGKAGDWTSAVHIFEQMQLQGVHANISCWTALLDALGRAKKVDQMLATYREMLASGQEPDTVAFGTLLAHAGAAGES-GIAEDIRREMQRLKIAPNTWTYCALTNCYAVTGEPEKAEAVLAEMRQSTMTKPSAIAYNRYVPSTCSCLRLLWDCLGGDVCFDCRTAWQWILQPTAK 240          
BLAST of jgi.p|Trimin1|163863 vs. uniprot
Match: A0A835YWR0_9STRA (PPR_long domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWR0_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.640e-35
Identity = 72/160 (45.00%), Postives = 101/160 (63.12%), Query Frame = 1
Query:  190 DYEHALRAHEKPHHWSGALKLLSDMDKNEITWTVRACSHALLICGVAGRLNDALQLVEEMRKRGMRPGPVDFLHLIGECRRSRRKLRAAED----------IWREMQRLKITPNTWSYSALINCYTVAGDPEKAEAVLAIMRQSTMAKPDAIAYNRYVQS 639
            +YE+AL+A+EK  HWSGAL+LLS MD N   WTVRACSHALL CG AGRLNDA QL+++M +RG+ P   D+L LI EC +S +K+RAA D          + + M++L + PN   Y A IN    AGD   A  +   M+   + +P+ I ++  +++
Sbjct:    2 NYEYALQAYEKSSHWSGALRLLSHMDNNNTKWTVRACSHALLACGFAGRLNDAFQLIQQMHQRGISPTSGDYLQLIRECHQSDKKVRAAGDSRNGSKQAMELLQHMEQLGVMPNFKHYGAAINVCGKAGDWASAVHIFQQMQHKGV-QPNLITWSGIIRA 160          
BLAST of jgi.p|Trimin1|163863 vs. uniprot
Match: A0A835YZG1_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZG1_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 5.750e-19
Identity = 69/191 (36.13%), Postives = 102/191 (53.40%), Query Frame = 1
Query:    7 LSQKGKWAAALKAFEDAEAKHHKPTVSENRALLYALAR-DGGPAEAWAAVHRLRVLGALTAVDYEHALRAHEKPHHWSGALKLLSDMDKNEITWTVRACSHALLICGVAGRLNDALQLVEEMRKRGMRPGPVDFLHLIGECRRSRRKLRA---------AEDIWREMQRLKITPNTWSYSALINCYTVAGD 549
            LS++G+W  A   F   +    +PT ++ R LL   A  +   ++A  A+ +LR  GA T  DYE  + AH   +   GAL+ L++MD+    W+  ACS AL  CG+AG+LNDALQL+ +MR+RG+  G   FL LI EC R +   RA         A ++ R M  + + P+   +SA +      GD
Sbjct:    4 LSREGRWREACALFNTVK----EPTAAQVRVLLLNNAAFNFSFSQAVLALRQLRASGAATVRDYELVIIAHR--YSARGALQFLAEMDRVGFGWSPIACSAALQACGIAGQLNDALQLLGKMRERGIAAGAGIFLTLIKECVRGKVSRRAGDSRGGGVRARELLRVMGEMGVVPDVRHFSAAMLVCAGVGD 188          
BLAST of jgi.p|Trimin1|163863 vs. uniprot
Match: A0A835ZGM9_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGM9_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 3.480e-18
Identity = 65/191 (34.03%), Postives = 103/191 (53.93%), Query Frame = 1
Query:    7 LSQKGKWAAALKAFEDAEAKHHKPTVSENRALLYALARDGGP-AEAWAAVHRLRVLGALTAVDYEHALRAHEKPHHWSGALKLLSDMDKNEITWTVRACSHALLICGVAGRLNDALQLVEEMRKRGMRPGPVDFLHLIGECRRSRRKLRA---------AEDIWREMQRLKITPNTWSYSALINCYTVAGD 549
            LS++G+W  A   F   +    +PT ++ RALL   A      ++A  A+ +LR LGA+T  D+E  + AH   +   GAL+ L++MD+   +W+  AC  AL  CGVAG+L+DA+QL+ +MR+R +      FL LI EC R +   RA         A ++ R M+ + + P+   ++A +      GD
Sbjct:    8 LSKEGRWREACALFNTIK----EPTAAQVRALLLKNAAFNQLFSQAVLALRQLRALGAVTVRDFELVIIAHR--YSARGALQFLAEMDRAGFSWSPIACGAALQACGVAGQLDDAMQLIGKMRERSIAVDAALFLTLIKECGRGKDGRRAGDSRGGVVRARELLRAMEEMGVAPDIRHFNAAMLVCAAVGD 192          
BLAST of jgi.p|Trimin1|163863 vs. uniprot
Match: A0A835YY11_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY11_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 6.990e-17
Identity = 56/143 (39.16%), Postives = 84/143 (58.74%), Query Frame = 1
Query:  241 ALKLLSDMD-KNEITWTVRACSHALLICGVAGRLNDALQLVEEMRKRGMRPGPVDFLHLIGECRRSR---------RKLRA------AEDIWREMQRLKITPNTWSYSALINCYTVAGDPEKAEAVLAIMRQSTMAKPDAIAY 621
            A++LL  M+ K+ +T  V     A+ +CG  G    A+ + ++++ +G+RP    +  L+    R++         R++ A      AE+IWREM++ ++TP   SY AL+NCY VAG+PEKAEA LA MRQST   PDAI Y
Sbjct:   14 AMELLQLMENKSGLTPGVGHYCAAMNVCGKEGDWTTAVHIFQQVQLQGVRPHTSCWNALLDALGRAKQLDQMLATYREMLASGQSGVAEEIWREMRQRRMTPGVKSYGALVNCYAVAGEPEKAEAKLAEMRQSTTTAPDAIMY 156          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163863 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A835Z794_9STRA3.930e-196100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z487_9STRA1.380e-7948.25PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A835YZD3_9STRA4.210e-6760.64Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z0J2_9STRA8.140e-6654.71PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A836CJC7_9STRA2.500e-5570.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YWP6_9STRA1.650e-4043.75PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A835YWR0_9STRA1.640e-3545.00PPR_long domain-containing protein (Fragment) n=1 ... [more]
A0A835YZG1_9STRA5.750e-1936.13PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A835ZGM9_9STRA3.480e-1834.03PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A835YY11_9STRA6.990e-1739.16PPR_long domain-containing protein n=1 Tax=Tribone... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_28contigContig_28:864354..865994 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|163863|e_gw1.28.168.1
DescriptionPPR repeat
COG categoryS
Max annot lvl2836|Bacillariophyta
EggNOG OGsKOG4197@1|root,KOG4197@2759|Eukaryota,2XA76@2836|Bacillariophyta
Evalue4.5e-05
Seed ortholog2850.Phatr36970
Hectar predicted targeting categoryother localisation
TranscriptId164185
TrackFilteredModels1
ProteinId163863
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163863gene_9029Tribonema minus UTEX_B_3156 geneContig_28 864354..865994 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9029_1exon_9029_1Tribonema minus UTEX_B_3156 exonContig_28 864354..864810 +
exon_9029_2exon_9029_2Tribonema minus UTEX_B_3156 exonContig_28 865645..865994 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9029CDS_9029Tribonema minus UTEX_B_3156 CDSContig_28 864354..864810 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163863Trimin1|163863|e_gw1.28.168.1Tribonema minus UTEX_B_3156 polypeptideContig_28 864354..865994 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9029 ID=mRNA_9029|Name=jgi.p|Trimin1|163863|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=807bp|location=Sequence derived from alignment at Contig_28:864354..865994+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTTTGAGCCAAAAGGGCAAGTGGGCAGCAGCTCTTAAAGCCTTTGA
AGATGCCGAGGCCAAGCATCACAAGCCCACAGTCTCCGAGAATAGGGCTC
TACTCTATGCGCTGGCCCGGGACGGTGGTCCGGCCGAGGCGTGGGCTGCT
GTGCACCGATTGCGTGTTTTGGGTGCTCTGACTGCTGTCGACTACGAGCA
CGCCCTCCGGGCGCACGAGAAGCCCCACCACTGGTCTGGAGCCTTGAAGC
TGTTGAGCGACATGGACAAGAATGAAATCACATGGACAGTCCGTGCCTGC
AGCCACGCATTGCTCATATGTGGAGTTGCAGGAAGGTTGAATGACGCACT
CCAGCTCGTAGAGGAGATGCGCAAACGCGGCATGCGCCCTGGCCCTGTTG
ACTTCCTCCACCTCATCGGTGAATGCCGCCGCAGCCGCCGCAAGCTGCGT
GCTGCTGAGGACATCTGGAGGGAGATGCAGCGCCTCAAGATTACGCCTAA
TACCTGGAGCTATTCTGCCTTGATCAACTGCTATACAGTAGCAGGAGACC
CAGAAAAAGCTGAGGCAGTGCTGGCAATAATGCGCCAGTCCACCATGGCG
AAGCCTGATGCCATTGCATACAACAGGTATGTGCAATCAACATGTTCATG
CCTGCTGTGGATTCAAGCTGCCCAGGTGTGTGCCGTCTGCTTTGAATGCA
GAACTGCATGGCACTACCCCTTGCAGCCTTTGGCCAAACAGCAGTGTGTG
TTGAGAGCGACGATCTCATCGAATCCGCAGGTGATGTCCGACATGCACGC
TCTGTGA
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protein sequence of jgi.p|Trimin1|163863

>Trimin1|163863|e_gw1.28.168.1 ID=Trimin1|163863|e_gw1.28.168.1|Name=jgi.p|Trimin1|163863|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=269bp
MALSQKGKWAAALKAFEDAEAKHHKPTVSENRALLYALARDGGPAEAWAA
VHRLRVLGALTAVDYEHALRAHEKPHHWSGALKLLSDMDKNEITWTVRAC
SHALLICGVAGRLNDALQLVEEMRKRGMRPGPVDFLHLIGECRRSRRKLR
AAEDIWREMQRLKITPNTWSYSALINCYTVAGDPEKAEAVLAIMRQSTMA
KPDAIAYNRYVQSTCSCLLWIQAAQVCAVCFECRTAWHYPLQPLAKQQCV
LRATISSNPQVMSDMHAL*
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mRNA from alignment at Contig_28:864354..865994+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9029 ID=mRNA_9029|Name=jgi.p|Trimin1|163863|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1641bp|location=Sequence derived from alignment at Contig_28:864354..865994+ (Tribonema minus UTEX_B_3156 )
ATGGCTTTGAGCCAAAAGGGCAAGTGGGCAGCAGCTCTTAAAGCCTTTGA AGATGCCGAGGCCAAGCATCACAAGCCCACAGTCTCCGAGAATAGGGCTC TACTCTATGCGCTGGCCCGGGACGGTGGTCCGGCCGAGGCGTGGGCTGCT GTGCACCGATTGCGTGTTTTGGGTGCTCTGACTGCTGTCGACTACGAGCA CGCCCTCCGGGCGCACGAGAAGCCCCACCACTGGTCTGGAGCCTTGAAGC TGTTGAGCGACATGGACAAGAATGAAATCACATGGACAGTCCGTGCCTGC AGCCACGCATTGCTCATATGTGGAGTTGCAGGAAGGTTGAATGACGCACT CCAGCTCGTAGAGGAGATGCGCAAACGCGGCATGCGCCCTGGCCCTGTTG ACTTCCTCCACCTCATCGGTGAATGCCGCCGCAGCCGCCGCAAGCTGCGT GCTGCTGGTGACAGCAGAGGTGGCAGCACGCAGGCAATGGAGCTGCTGCA GCTTATGGAACGATTGGGCGTGACGCCCGAACCTTAACACTACAGCGCAG CCATGAATGTGTCCGGAAAGGAGGGAGACTGGATTACTGCCGTCCACATC TTTAAACAGATGCAGCTTCAGGTGATCAAATTCATCAAGTGCCAGCGCGC ATTAGTATGGGGTTACACGTAGGCGTGGCAGTGAAGCTGTTGCACCACAA TATAGGTTGCGTCAGCAGGCAAGTGCAGCAAGTATGCATACATGCAATAG CTTTCTTATGAATCAGATGTTGTACCTCAAGTTCATGGCTGCAGATGTAT ATACATGACATCTTTTAGGCTAGCCGCTCTACATCATTTCTGTGCGCTTT CAGGTCTTTTCACTCGTTATAGCACCAGTGACCACTTTGACATCAGAAAT ATTAATGCAGCAGCCTGAGTTCTTGAGTATTTAACCTTTGAATGTAACGC ATTGTATGTACTATGATGATGTACAGCTTTGGGATAGGACAGAATGCGTG AGAAACAGGCACCAGATCAAACCTGCAACCCGCTTTTCACTATGGAGCAG ACTCGCTGAAAAATCAAAACCTGAAGTCTTGTCTTGTCCGTGGCCTGCTC CATGCTGCAGGGGGTATGTCCCAGCATTACGTGCTGGAACGCCCTTTTGG ATGCTCTCGGGAGGGCAAAAAAGGTGGACCAGATGCTGGAAGAATATGGG GAAATGCTCAAAAGCGGGCAGCAGCCTGACAGAGTCATGTTGACCACAAT GATAGCTCACTCAGGGGCGGCCGGACAGTGTGGCAGCACAGAGGACATCT GGAGGGAGATGCAGCGCCTCAAGATTACGCCTAATACCTGGAGCTATTCT GCCTTGATCAACTGCTATACAGTAGCAGGAGACCCAGAAAAAGCTGAGGC AGTGCTGGCAATAATGCGCCAGTCCACCATGGCGAAGCCTGATGCCATTG CATACAACAGGTATGTGCAATCAACATGTTCATGCCTGCTGTGGATTCAA GCTGCCCAGGTGTGTGCCGTCTGCTTTGAATGCAGAACTGCATGGCACTA CCCCTTGCAGCCTTTGGCCAAACAGCAGTGTGTGTTGAGAGCGACGATCT CATCGAATCCGCAGGTGATGTCCGACATGCACGCTCTGTGA
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Coding sequence (CDS) from alignment at Contig_28:864354..865994+

>mRNA_9029 ID=mRNA_9029|Name=jgi.p|Trimin1|163863|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=807bp|location=Sequence derived from alignment at Contig_28:864354..865994+ (Tribonema minus UTEX_B_3156 )
ATGGCTTTGAGCCAAAAGGGCAAGTGGGCAGCAGCTCTTAAAGCCTTTGA
AGATGCCGAGGCCAAGCATCACAAGCCCACAGTCTCCGAGAATAGGGCTC
TACTCTATGCGCTGGCCCGGGACGGTGGTCCGGCCGAGGCGTGGGCTGCT
GTGCACCGATTGCGTGTTTTGGGTGCTCTGACTGCTGTCGACTACGAGCA
CGCCCTCCGGGCGCACGAGAAGCCCCACCACTGGTCTGGAGCCTTGAAGC
TGTTGAGCGACATGGACAAGAATGAAATCACATGGACAGTCCGTGCCTGC
AGCCACGCATTGCTCATATGTGGAGTTGCAGGAAGGTTGAATGACGCACT
CCAGCTCGTAGAGGAGATGCGCAAACGCGGCATGCGCCCTGGCCCTGTTG
ACTTCCTCCACCTCATCGGTGAATGCCGCCGCAGCCGCCGCAAGCTGCGT
GCTGCTGAGGACATCTGGAGGGAGATGCAGCGCCTCAAGATTACGCCTAA
TACCTGGAGCTATTCTGCCTTGATCAACTGCTATACAGTAGCAGGAGACC
CAGAAAAAGCTGAGGCAGTGCTGGCAATAATGCGCCAGTCCACCATGGCG
AAGCCTGATGCCATTGCATACAACAGGTATGTGCAATCAACATGTTCATG
CCTGCTGTGGATTCAAGCTGCCCAGGTGTGTGCCGTCTGCTTTGAATGCA
GAACTGCATGGCACTACCCCTTGCAGCCTTTGGCCAAACAGCAGTGTGTG
TTGAGAGCGACGATCTCATCGAATCCGCAGGTGATGTCCGACATGCACGC
TCTGTGA
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