mRNA_9016 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|348626
Unique Name	mRNA_9016
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|348626 vs. uniprot
Match: A0A835Z1Y8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Y8_9STRA)

HSP 1 Score: 1488 bits (3853), Expect = 0.000e+0
Identity = 1041/1041 (100.00%), Postives = 1041/1041 (100.00%), Query Frame = 1

Query:    1 MWEARVLLQLFMPLGFLGTGKSSIAKELQQRLGAAVISSEYLEVGKGGKKQARRLKSQEYEQAIKTALCAQYRALPPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSNAAVAGVXXXXXXXXXXXXXPSPMHVDQQSSGEGHLNKQQLGRRSNDGASSTGVAGGMPAAAXXXXXXXXAGTRPEQVNAQGGKGGKKGKARGFGGDNRPPAAADVAGTADAPPPAPEDAMEVERRGGKAHRGKRGNPNNGNAARGQQAALPRHDDATSSAASSTAPXXXXASSTSAAGXXXXXXXXXXXXXXXXXXXAQHPHNAKGKHGKGGRNGGTSNGTGADQSDPRLGNGGGXXXXXXGHDTAGAGAKHAPAGASGSSSMXXXXXXXXXXQHAGSSRGGGRGVGVTGAELGSSTHDIMEVDAADLPAPVSAAGKESHHAVIADAAVLSTNGGTKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAAARHRALPSPLVVRDKNIPKEDLWRAVGSAQPSAAIALAFGGSARDFGSDAAAAAMLGAVPPVSPWELAVCMRRVMQRAEHPSIMPQADITPGLVCQFASRLAGGYYCSVTPGGKVTGVSYSRWQWLADIADTFGGAHRVIGIPLCRPEQYSTAPPQPLASLLEVGMYACGGFRVEDDAFAGIAQIPGVKELMARDRAARRGAGDADGGKHVXXXXXXXXXXXXXXXXEADAALGAMAYDRADADFVRILDDAVHKIEALLTTSDEPTNTAAQSVTARXXXXXXXXXXPSTSTPLAADAAGPAAVLTAKAASSSLPLPRTGAFYYAIIARVSDLEAVLGATAVALAKAWLRDRWSLDWPAPGGNVHVTLLFVANSAAATAQAATVQTLHEMLGRKAQMMVTGIACDGQAAALTVTDLLLGSSGVIDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGAIPCVNTCAHMTLATAPGVAPRHSNNMLEGGRYEFLELAGFAQPAPPLQLAGTVALVHRQSRIA 3123
            MWEARVLLQLFMPLGFLGTGKSSIAKELQQRLGAAVISSEYLEVGKGGKKQARRLKSQEYEQAIKTALCAQYRALPPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSNAAVAGVXXXXXXXXXXXXXPSPMHVDQQSSGEGHLNKQQLGRRSNDGASSTGVAGGMPAAAXXXXXXXXAGTRPEQVNAQGGKGGKKGKARGFGGDNRPPAAADVAGTADAPPPAPEDAMEVERRGGKAHRGKRGNPNNGNAARGQQAALPRHDDATSSAASSTAPXXXXASSTSAAGXXXXXXXXXXXXXXXXXXXAQHPHNAKGKHGKGGRNGGTSNGTGADQSDPRLGNGGGXXXXXXGHDTAGAGAKHAPAGASGSSSMXXXXXXXXXXQHAGSSRGGGRGVGVTGAELGSSTHDIMEVDAADLPAPVSAAGKESHHAVIADAAVLSTNGGTKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAAARHRALPSPLVVRDKNIPKEDLWRAVGSAQPSAAIALAFGGSARDFGSDAAAAAMLGAVPPVSPWELAVCMRRVMQRAEHPSIMPQADITPGLVCQFASRLAGGYYCSVTPGGKVTGVSYSRWQWLADIADTFGGAHRVIGIPLCRPEQYSTAPPQPLASLLEVGMYACGGFRVEDDAFAGIAQIPGVKELMARDRAARRGAGDADGGKHVXXXXXXXXXXXXXXXXEADAALGAMAYDRADADFVRILDDAVHKIEALLTTSDEPTNTAAQSVTARXXXXXXXXXXPSTSTPLAADAAGPAAVLTAKAASSSLPLPRTGAFYYAIIARVSDLEAVLGATAVALAKAWLRDRWSLDWPAPGGNVHVTLLFVANSAAATAQAATVQTLHEMLGRKAQMMVTGIACDGQAAALTVTDLLLGSSGVIDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGAIPCVNTCAHMTLATAPGVAPRHSNNMLEGGRYEFLELAGFAQPAPPLQLAGTVALVHRQSRIA
Sbjct:    1 MWEARVLLQLFMPLGFLGTGKSSIAKELQQRLGAAVISSEYLEVGKGGKKQARRLKSQEYEQAIKTALCAQYRALPPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSNAAVAGVXXXXXXXXXXXXXPSPMHVDQQSSGEGHLNKQQLGRRSNDGASSTGVAGGMPAAAXXXXXXXXAGTRPEQVNAQGGKGGKKGKARGFGGDNRPPAAADVAGTADAPPPAPEDAMEVERRGGKAHRGKRGNPNNGNAARGQQAALPRHDDATSSAASSTAPXXXXASSTSAAGXXXXXXXXXXXXXXXXXXXAQHPHNAKGKHGKGGRNGGTSNGTGADQSDPRLGNGGGXXXXXXGHDTAGAGAKHAPAGASGSSSMXXXXXXXXXXQHAGSSRGGGRGVGVTGAELGSSTHDIMEVDAADLPAPVSAAGKESHHAVIADAAVLSTNGGTKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAAARHRALPSPLVVRDKNIPKEDLWRAVGSAQPSAAIALAFGGSARDFGSDAAAAAMLGAVPPVSPWELAVCMRRVMQRAEHPSIMPQADITPGLVCQFASRLAGGYYCSVTPGGKVTGVSYSRWQWLADIADTFGGAHRVIGIPLCRPEQYSTAPPQPLASLLEVGMYACGGFRVEDDAFAGIAQIPGVKELMARDRAARRGAGDADGGKHVXXXXXXXXXXXXXXXXEADAALGAMAYDRADADFVRILDDAVHKIEALLTTSDEPTNTAAQSVTARXXXXXXXXXXPSTSTPLAADAAGPAAVLTAKAASSSLPLPRTGAFYYAIIARVSDLEAVLGATAVALAKAWLRDRWSLDWPAPGGNVHVTLLFVANSAAATAQAATVQTLHEMLGRKAQMMVTGIACDGQAAALTVTDLLLGSSGVIDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGAIPCVNTCAHMTLATAPGVAPRHSNNMLEGGRYEFLELAGFAQPAPPLQLAGTVALVHRQSRIA 1041

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348626 vs. uniprot

BLAST of jgi.p|Trimin1|348626 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z1Y8_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_28	contig	Contig_28:686140..693071 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|348626\|estExt_Genemark1.C_Ctg_280067
Hectar predicted targeting category	signal peptide
TranscriptId	348948
Track	FilteredModels1
ProteinId	348626

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348626	gene_9016	Tribonema minus UTEX_B_3156	gene	Contig_28 686140..693071 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348626	Trimin1\|348626\|estExt_Genemark1.C_Ctg_280067	Tribonema minus UTEX_B_3156	polypeptide	Contig_28 686140..692870 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_9016_1	exon_9016_1	Tribonema minus UTEX_B_3156	exon	Contig_28 686140..686195 +
exon_9016_2	exon_9016_2	Tribonema minus UTEX_B_3156	exon	Contig_28 686788..686852 +
exon_9016_3	exon_9016_3	Tribonema minus UTEX_B_3156	exon	Contig_28 687410..689145 +
exon_9016_4	exon_9016_4	Tribonema minus UTEX_B_3156	exon	Contig_28 689676..689966 +
exon_9016_5	exon_9016_5	Tribonema minus UTEX_B_3156	exon	Contig_28 690611..690745 +
exon_9016_6	exon_9016_6	Tribonema minus UTEX_B_3156	exon	Contig_28 692028..693071 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_9016	CDS_9016	Tribonema minus UTEX_B_3156	CDS	Contig_28 686140..686195 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_9016	UTR3_9016	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_28 692871..693071 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_28:686140..693071+
coding sequence from alignment at Contig_28:686140..693071+

spliced messenger RNA

>mRNA_9016 ID=mRNA_9016|Name=jgi.p|Trimin1|348626|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3327bp|location=Sequence derived from alignment at Contig_28:686140..693071+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTGGGAGGCGCGTGTCCTGCTGCAGCTGTTCATGCCGCTGGGGTTCCT
GGGCACTGGCAAGAGCTCCATCGCCAAGGAGCTGCAGCAGCGGCTGGGTG
CAGCGGTGATCAGCTCAGAATATCTGGAAGTTGGCAAGGGCGGCAAGAAG
CAGGCGCGCAGGCTCAAGTCCCAGGAGTACGAGCAGGCCATCAAGACGGC
GCTATGCGCGCAGTACCGCGCCCTCCCTCCACTGCCCCCCCCACCCCCCA
CCGCTCCCCCTGCTGCTACCCCCCCTGGTGCTGCTGCCGGCGATACGAGT
GCTGCCGGTGCTGGCACCACTCCTGCCGCCGCCGCTGCCGCCGCCGCCGC
TGGCGCAACCTCGAATGCAGCCGTAGCCGGTGTCAAGCCTGCTCAGCCTG
CCGCTTCCGCTGCCGCAGCCGCCCCTAGCCCCATGCACGTCGACCAACAG
AGCAGTGGCGAAGGCCACCTCAACAAGCAGCAACTGGGGAGGCGCAGCAA
TGACGGCGCCAGCTCAACTGGGGTTGCTGGTGGCATGCCTGCTGCGGCTG
CGGTCGCTGCTGCTGCTGCTGCCGCTGGCACCAGGCCCGAGCAAGTCAAT
GCGCAGGGGGGCAAAGGCGGGAAGAAGGGGAAGGCGCGGGGGTTTGGAGG
CGACAACAGGCCCCCTGCTGCTGCTGACGTCGCAGGCACTGCTGACGCCC
CCCCCCCTGCGCCTGAGGATGCTATGGAGGTTGAGCGCAGGGGCGGCAAA
GCGCACAGGGGGAAGCGCGGGAACCCCAACAACGGCAATGCAGCGCGCGG
GCAACAGGCGGCGCTGCCGCGCCATGACGATGCTACTTCAAGTGCTGCTA
GTTCAACTGCTCCGAGCACTGCTCCAGCAAGTAGCACGTCCGCTGCTGGC
GCTACGCCTGCTGCAGCGGCGCCTGCTGCAATGGCTGCTGCCGCTGCTGC
GCTGCCTGCGCAGCATCCCCACAACGCAAAGGGGAAGCACGGCAAGGGGG
GCAGGAACGGGGGCACCAGCAATGGGACTGGTGCGGATCAGTCCGACCCT
CGATTGGGTAACGGCGGTGGTGGGCAACAGGGGCAGAACGGACACGATAC
AGCAGGTGCGGGAGCCAAACACGCTCCTGCTGGAGCTAGCGGCAGCAGCA
GCATGGCAGCAGCGACCAGCAGTGGCAGTGCTCAGCAGCATGCGGGAAGC
AGCCGGGGGGGAGGCCGGGGAGTCGGCGTCACCGGCGCGGAGCTCGGCAG
CAGCACACACGACATCATGGAGGTAGACGCAGCAGATCTGCCCGCCCCTG
TGTCAGCAGCGGGCAAGGAGAGTCATCACGCAGTCATTGCAGATGCAGCA
GTGCTCAGCACGAATGGAGGCACGAAGGCGGCTGGGCCTGCGGGTGTGGC
GGCAGCAGCAGGCGCTCAACCGGCGGCGCGCGCCGCAGCGGCGCTCAGCA
CCAGCGTCAGCAGCTCAGCTGCTGCTCAGCCCCCGCCCAGCATCGGTGCG
GTGGCAGCGAGCAGCAGCAACGCGCCGGCAGCGGCGCGGCACCGCGCCCT
CCCCTCGCCGCTAGTAGTGCGCGATAAGAACATTCCGAAGGAGGACCTCT
GGCGCGCAGTAGGCAGCGCTCAGCCGAGCGCTGCCATCGCGTTGGCGTTC
GGAGGCAGCGCGCGTGACTTCGGCAGCGACGCGGCAGCGGCAGCAATGCT
TGGCGCGGTGCCCCCCGTGTCCCCGTGGGAGCTGGCCGTGTGCATGCGGC
GCGTGATGCAGCGCGCGGAGCACCCGAGCATCATGCCGCAGGCGGACATC
ACGCCGGGCCTCGTGTGCCAGTTTGCGTCGCGGCTGGCGGGGGGCTACTA
CTGCTCTGTGACCCCAGGCGGGAAGGTCACCGGCGTCAGTTACAGCCGCT
GGCAGTGGCTCGCCGATATCGCTGACACATTCGGCGGCGCTCACCGCGTC
ATAGGCATACCGCTGTGCCGCCCCGAGCAGTACTCGACAGCGCCGCCGCA
GCCTCTGGCGTCACTTCTTGAAGTTGGCATGTACGCGTGCGGCGGTTTCC
GCGTGGAGGATGACGCATTTGCGGGCATCGCGCAGATACCGGGCGTTAAG
GAGTTGATGGCGAGGGACAGGGCTGCGCGGCGGGGCGCCGGCGACGCGGA
TGGGGGAAAGCACGTCGGCGCACATCAGGCGGCATGGGCGGCTGCTGTCA
GGGCCGCCGTACGCGAAGCCGATGCTGCACTGGGCGCGATGGCTTACGAC
CGCGCGGACGCTGACTTTGTTCGCATACTTGACGATGCCGTGCACAAGAT
CGAAGCACTCCTGACCACCTCAGACGAGCCCACCAACACAGCAGCGCAGA
GTGTCACTGCTCGCCCCCCCCCCCCACCCGCTGCCGCTACTTCACCATCA
ACTTCAACCCCCCTAGCAGCAGACGCCGCAGGCCCCGCAGCAGTGCTCAC
AGCCAAAGCCGCCAGCAGCAGCCTCCCCCTGCCTCGCACCGGCGCCTTCT
ATTACGCTATCATCGCACGCGTGTCGGATTTGGAAGCGGTGTTGGGCGCC
ACCGCCGTGGCTCTTGCGAAGGCGTGGCTGCGTGATCGCTGGTCCCTGGA
CTGGCCTGCCCCGGGCGGCAACGTGCACGTGACGCTGCTGTTCGTGGCGA
ACAGCGCGGCGGCGACGGCGCAGGCTGCCACAGTGCAGACGCTGCACGAG
ATGCTTGGTCGGAAGGCTCAGATGATGGTCACGGGCATCGCGTGCGATGG
GCAAGCGGCTGCGCTCACCGTCACAGATCTGCTTCTTGGCAGCAGCGGCG
TGATAGATGGCGGCAGCGGCGGCGGCAGCAGTGCTGATGACGGCGGTGTC
AGTGGCAGCGGTAGCGGCGGCAGTGGCGGCGGTGGCGGCAGCAGCGGCGG
CAACGCAGGTGGCGCTGCCGCTGCCGATGGCGCCATCCCGTGTGTCAACA
CCTGCGCGCACATGACGTTGGCTACTGCACCTGGCGTAGCTCCGCGGCAC
AGCAACAACATGCTCGAGGGCGGACGCTATGAGTTCCTGGAGCTAGCGGG
GTTTGCGCAGCCTGCGCCGCCGCTGCAGCTTGCCGGCACCGTCGCGCTGG
TGCACAGGCAGAGCCGCATCGCGTGAGAGTGACGCTAGCGCCCGCTGCGA
GTTGTGTCCTCACAATGCGGCTGCCGCACACAGGCAGAGTCGCAGTGTAC
TTCAAATGTGAGAGGCGGTACAGTGCGCCGATAGTAGCCTCTACAGTGCG
CCCGTCGGTGCTGCCGGCGCAAGTCCATCCTGGCCTCGCGCTTTCAGTGC
GTGTGCGCAGCAGAGCTACGGCATTGG

protein sequence of jgi.p|Trimin1|348626

>Trimin1|348626|estExt_Genemark1.C_Ctg_280067 ID=Trimin1|348626|estExt_Genemark1.C_Ctg_280067|Name=jgi.p|Trimin1|348626|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1042bp
MWEARVLLQLFMPLGFLGTGKSSIAKELQQRLGAAVISSEYLEVGKGGKK
QARRLKSQEYEQAIKTALCAQYRALPPLPPPPPTAPPAATPPGAAAGDTS
AAGAGTTPAAAAAAAAAGATSNAAVAGVKPAQPAASAAAAAPSPMHVDQQ
SSGEGHLNKQQLGRRSNDGASSTGVAGGMPAAAAVAAAAAAAGTRPEQVN
AQGGKGGKKGKARGFGGDNRPPAAADVAGTADAPPPAPEDAMEVERRGGK
AHRGKRGNPNNGNAARGQQAALPRHDDATSSAASSTAPSTAPASSTSAAG
ATPAAAAPAAMAAAAAALPAQHPHNAKGKHGKGGRNGGTSNGTGADQSDP
RLGNGGGGQQGQNGHDTAGAGAKHAPAGASGSSSMAAATSSGSAQQHAGS
SRGGGRGVGVTGAELGSSTHDIMEVDAADLPAPVSAAGKESHHAVIADAA
VLSTNGGTKAAGPAGVAAAAGAQPAARAAAALSTSVSSSAAAQPPPSIGA
VAASSSNAPAAARHRALPSPLVVRDKNIPKEDLWRAVGSAQPSAAIALAF
GGSARDFGSDAAAAAMLGAVPPVSPWELAVCMRRVMQRAEHPSIMPQADI
TPGLVCQFASRLAGGYYCSVTPGGKVTGVSYSRWQWLADIADTFGGAHRV
IGIPLCRPEQYSTAPPQPLASLLEVGMYACGGFRVEDDAFAGIAQIPGVK
ELMARDRAARRGAGDADGGKHVGAHQAAWAAAVRAAVREADAALGAMAYD
RADADFVRILDDAVHKIEALLTTSDEPTNTAAQSVTARPPPPPAAATSPS
TSTPLAADAAGPAAVLTAKAASSSLPLPRTGAFYYAIIARVSDLEAVLGA
TAVALAKAWLRDRWSLDWPAPGGNVHVTLLFVANSAAATAQAATVQTLHE
MLGRKAQMMVTGIACDGQAAALTVTDLLLGSSGVIDGGSGGGSSADDGGV
SGSGSGGSGGGGGSSGGNAGGAAAADGAIPCVNTCAHMTLATAPGVAPRH
SNNMLEGGRYEFLELAGFAQPAPPLQLAGTVALVHRQSRIA*

mRNA from alignment at Contig_28:686140..693071+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_9016 ID=mRNA_9016|Name=jgi.p|Trimin1|348626|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6932bp|location=Sequence derived from alignment at Contig_28:686140..693071+ (Tribonema minus UTEX_B_3156 )
ATGTGGGAGGCGCGTGTCCTGCTGCAGCTGTTCATGCCGCTGGGGTTCCT
GGGCACGTGAGCAGGGGCGCAGAAGTACAGAGTTGAATATTTGTTCAAGT
GACACTGGTTGTCGTCTCAGTCATATTTAGCCGAGTTTGCTGGGCACGCA
AGTCTAGGGGGTTGCGCAGTAGTGCGCAGTTGAAGTTGAGAATTGAGTGC
TGCGCCTGATGCCCCCGGAGTGTCTGGGCACCTAGGTCTGGTAGGCAAGG
ATAAGGGGCTGCGCAGCAGTACATATTGAAGTTCAGAAAAAGGTGCCTCT
TGTCTGTTGAAGTTATGAGCACGCAAGCGCAGTGGTCTGTAGGGCATGTC
AAGTGCAGTAGTGGCCAGCCAGCAGGTTCGCAGGATATGCTTGACCACTG
ACACTTTGAACTGTATGTAGTACACAGAAGGTGAGGACCCAGACCCAATT
GCACCCTAGGCTTACCTCTGTCAAATATCGCCATACCATTAACAGCGCTC
TCAGATACTGCATTGGAGCCACGGACAGCCATGTTGTTATGTGCAGTGGT
GCCTGCACCACTCTCTGTTGCGCTCAAATTCTCGTCTCTAAGTGCACATC
ATTGTGTGATGCTGATGCTCAACACGTTCGTGTTGCCTTCACCTGCAGTG
GCAAGAGCTCCATCGCCAAGGAGCTGCAGCAGCGGCTGGGTGCAGCGGTG
ATCAGCTCAGAATGTGAGCAAACCAATGAACCTGCGCACATTGCTCACGC
ACTTGACCACTTGGATTGGAGGGTGCATGCCTTACAACGACTGTTCAGCC
AGTGTGTTTGTATGCCTATCAAGAGTGTCGACGGAAGGCATTGGTGTGAG
TGTTTCAGTGCCTTTGTGTAAAGTCGCACACAGTTTTCCATGGAGTGAAG
CAACGCTGGTTCAGCAAAAGTCCATTGATCTGACATCACCGTCTCATCTC
GTCCTGCAATGGGGTTAGGATTACGGTCAGGTTAGCGTTTGTTCTGGAAG
TCAGTGACGTGACACCTGGCGCTGCAATGGATGTTTTTAGCACCGACCGC
ACCTCGTGTCAAAGAGGCCAATGCTCGCAACCCTCGCCCATCTGTCTGCA
GATCTGATGATCTTGTGCTAGAACTGTTGTACCTCAAGAAATACTGAAGT
ACGTGATTAACTTGATTCACTGCAGGCTAGAGAAAACAATCATGGAGTCC
ATTTTCAATGAAACGAGCATGCAAATCACGCATCAAGCTCACAACTCATG
ACTTTTTCGTCTGTCTGCAGATCTGGAAGTTGGCAAGGGCGGCAAGAAGC
AGGCGCGCAGGCTCAAGTCCCAGGAGTACGAGCAGGCCATCAAGACGGCG
CTATGCGCGCAGTACCGCGCCCTCCCTCCACTGCCCCCCCCACCCCCCAC
CGCTCCCCCTGCTGCTACCCCCCCTGGTGCTGCTGCCGGCGATACGAGTG
CTGCCGGTGCTGGCACCACTCCTGCCGCCGCCGCTGCCGCCGCCGCCGCT
GGCGCAACCTCGAATGCAGCCGTAGCCGGTGTCAAGCCTGCTCAGCCTGC
CGCTTCCGCTGCCGCAGCCGCCCCTAGCCCCATGCACGTCGACCAACAGA
GCAGTGGCGAAGGCCACCTCAACAAGCAGCAACTGGGGAGGCGCAGCAAT
GACGGCGCCAGCTCAACTGGGGTTGCTGGTGGCATGCCTGCTGCGGCTGC
GGTCGCTGCTGCTGCTGCTGCCGCTGGCACCAGGCCCGAGCAAGTCAATG
CGCAGGGGGGCAAAGGCGGGAAGAAGGGGAAGGCGCGGGGGTTTGGAGGC
GACAACAGGCCCCCTGCTGCTGCTGACGTCGCAGGCACTGCTGACGCCCC
CCCCCCTGCGCCTGAGGATGCTATGGAGGTTGAGCGCAGGGGCGGCAAAG
CGCACAGGGGGAAGCGCGGGAACCCCAACAACGGCAATGCAGCGCGCGGG
CAACAGGCGGCGCTGCCGCGCCATGACGATGCTACTTCAAGTGCTGCTAG
TTCAACTGCTCCGAGCACTGCTCCAGCAAGTAGCACGTCCGCTGCTGGCG
CTACGCCTGCTGCAGCGGCGCCTGCTGCAATGGCTGCTGCCGCTGCTGCG
CTGCCTGCGCAGCATCCCCACAACGCAAAGGGGAAGCACGGCAAGGGGGG
CAGGAACGGGGGCACCAGCAATGGGACTGGTGCGGATCAGTCCGACCCTC
GATTGGGTAACGGCGGTGGTGGGCAACAGGGGCAGAACGGACACGATACA
GCAGGTGCGGGAGCCAAACACGCTCCTGCTGGAGCTAGCGGCAGCAGCAG
CATGGCAGCAGCGACCAGCAGTGGCAGTGCTCAGCAGCATGCGGGAAGCA
GCCGGGGGGGAGGCCGGGGAGTCGGCGTCACCGGCGCGGAGCTCGGCAGC
AGCACACACGACATCATGGAGGTAGACGCAGCAGATCTGCCCGCCCCTGT
GTCAGCAGCGGGCAAGGAGAGTCATCACGCAGTCATTGCAGATGCAGCAG
TGCTCAGCACGAATGGAGGCACGAAGGCGGCTGGGCCTGCGGGTGTGGCG
GCAGCAGCAGGCGCTCAACCGGCGGCGCGCGCCGCAGCGGCGCTCAGCAC
CAGCGTCAGCAGCTCAGCTGCTGCTCAGCCCCCGCCCAGCATCGGTGCGG
TGGCAGCGAGCAGCAGCAACGCGCCGGCAGCGGCGCGGCACCGCGCCCTC
CCCTCGCCGCTAGTAGTGCGCGATAAGAACATTCCGAAGGAGGACCTCTG
GCGCGCAGTAGGCAGCGCTCAGCCGAGCGCTGCCATCGCGTTGGCGTTCG
GAGGCAGCGCGCGTGACTTCGGCAGCGACGCGGCAGCGGCAGCAATGCTT
GGCGCGGTGCCCCCCGTGTCCCCGTGGGAGCTGGCCGTGTGCATGCGGCG
CGTGATGCAGCGCGCGGAGCACCCGAGCATCATGCCGCAGGCGGACATCA
CGCCGGGCCTCGTGTGCCAGTTTGCGTCGCGGCTGGCGGGGGGCTACTAC
TGCTCTGTGAGTGGGCTGCTGCCGCGATATGGGATGTATGCGCGGTTCGT
GCAGCTTTGATGGTGTATCTAAACCTGATTTGGAAAATCACGACTTTCGG
TTGGTTAGCTTCGAGTGTTGGTACTATTTCGCGTGTACTAACACATTTGC
GTGTCTGTTTTTCAAATACTTAGGTTGCTTGTGGTTTAAGCCAATATACC
GTTGCGGGTGTCATGCGGCAGGGTACTTGCAAGTGCGAGCGTTGGCCTAT
GACAAGTGTGCACGAAGTGAACGCACACACAGAGTGCACACAGTAGCCGT
GTCGGACCTGAAATACTGCCAATCTAGGCACTGCTGTGATTGCGTGATGT
TCATTCCACATACGTGGAGTTGGCAGCTGCAGATAACGTGAAGTGCCACA
GGGCTATGTACGCGTATGACATTTCTATGTGCTACTTCACTCTTCTCGTT
CACCATGCCAACACTGTGCAAACCCACGCTTTATGTACCTACCAACAGTG
TCTCACACGCTCGCACGCCTGTCTGTCCACCCCCAGGTGACCCCAGGCGG
GAAGGTCACCGGCGTCAGTTACAGCCGCTGGCAGTGGCTCGCCGATATCG
CTGACACATTCGGCGGCGCTCACCGCGTCATAGGCATACCGCTGTGCCGC
CCCGAGCAGTACTCGACAGCGCCGCCGCAGCCTCTGGCGTCACTTCTTGA
AGTTGGCATGTACGCGTGCGGCGGTTTCCGCGTGGAGGATGACGCATTTG
CGGGCATCGCGCAGATACCGGGCGTTAAGGAGTTGATGGCGAGGGACAGG
GCTGCGCGGCGGGGCGCCGGCGACGCGGTGAGCCCCAGATGCGGCAATAA
GTACATAGGGTTTGAGTAAATAAGAGCAGGGCGGAGAGTGGAGTTAATGC
TGATGGGTATGTTTGATGGGGCATTACGTGCATGCTGTGTTGTGTTGAGG
GTTCACTGGAGCTGCAGTGCAGTCATCGCTGTGCTTGCAACGGCACAGGT
AGGCACCTCTGACAATGATACCAACAGGCTTGCTGAGAACTGCTGGCAAG
TGCCATCTCTCCCGGTTGTCCACGATGGCAGGGCGTCACTGCAACAAATG
TCACAACTACTGGAAGTATGTAGTTCAGGGTGTGACAAACTTCAACGAGC
GATCGTCACAACCATATCTGTGAACGCAGCAGTTTCAACAAAGCCGCAAT
CAATGCTGACGATTGCTGTCGGTTCTCCGGTTGCTTCGTCCACAGGACTA
CAGAAAGCTCACCGAAACAAGCGTCGCAACTATGCCCTGAATGTCAAATA
CCTCAACAAAGCAACTGCCACAAATCAATGCTGGTGGTAGGTAACAGTGC
TGTCTGTCTGTCCCGATTGCTGCGTCAAGATGCCCTGGATGCCAATATTT
TTATAAAGCAACTGCCACAAATCAATGCTGGTGGTAACAGTGCAATCTGC
CTGTCCCATTTGCTGTATCAGGATGGGGGAAAGCACGTCGGCGCACATCA
GGCGGCATGGGCGGCTGCTGTCAGGGCCGCCGTACGCGAAGCCGATGCTG
CACTGGGCGCGATGGCTTACGACCGCGCGGACGCTGACTTTGTTCGCATA
CTTGACGTGAGTGAAACATTCATGGCAAAGTGTTTGCGCAGCATGGTGGA
AATTGACTTCAGATGCAGGTGATCATTGGCGATTGCACAAGGTGTTGAAG
TATGGGCAGCTGCTGTTCGGACCGCCGTACGCGAAGCCGATGCTGCACTG
GGTGCGATGGCTTACGACCGCGCGGACGCTGACTTTGTTCGAATACTCGT
TGTAAGCACCACACTAAACTCATTGCGAAATGTTTGTGCAGCAAGGTGGT
TTTTGATTCTGGTTTCAGTTTTCACCAATGCCTTGAAGTGTGTGAAGCTG
ATGATGCGTCGGGTGCGATGGCTTACGACAGCGCGGATGCTGACTGTATT
CGTATACTTGACGTTAGCCAAACTTTCATGGCAAAGTGGTTGCACAGCAC
AGTTGTAGTGATTTCATATGCAGATGATCATTGACGATTGCGCAAGGTGG
TGAAGCATAGGCATAACGAGGGCTGCTGTATGCGATGCCGATGCCATGGT
GTATGCCTCGGGTTACGATCACGCGCGTGCTGACTTCATCCATATACTCA
ACGTGAACATCCGCTTTCATGATGTACAACAAAACCATACTTCAAGTGGT
GGCATGAGCAGGTCTGTGTGTAAGCAACACTGAAATGTGAGCATGTTGAG
GGCTGCAGCTCACGTAGCCTGTGCCACTCTTGGCCTCTTATGCAACCTCA
CAAGGACGGGCATCATGGGCACTTCACGGTATCCAGACTTCAAGAGAGAG
TACTTGTTATTGGTACTCATTATTCACATTTGAAGGTGTTGCTTACAAGC
AGCTGAATCTGGTGACTTGGTGCACTGAGTTTGTTCAAAACTCCATGATC
TGGACACCGCAGATGACGTGTCAAGCTGCAGGCAAACACACCTTTTGCAG
GCGCATCGCAGAGCGGGGGTACTCAGGGGAGACACGACACACATTTAATC
TGTGCGCCAGACTGTTTTGAAGTACGACGTACGGGCACCATATTCACCTG
TTCAGGGTACTACAAAGTGCATGAATGGCACCTGCTCACGACTGCTGCGC
AACTGTCGTTTCATCAACAAGCAGCATCACCTTATCAGTATGCGTGCTCA
TAGTGGAAGGCACAAGCACGTATTACAGTGCCTCGGCTGCTTTACTGGCT
ACAATTCTGCTACAGTTCTTGCGTCGATGAGCTGCACGACCTTCGCTCGC
CACATCACGTCCATCACTCGCCAATCACATGGCAGTTACAGCCTGTCATT
GCTCACCGGTGGCAAATGCACGCTGATCACTGCCTCAGGATGCCGTGCAC
AAGATCGAAGCACTCCTGACCACCTCAGACGAGCCCACCAACACAGCAGC
GCAGAGTGTCACTGCTCGCCCCCCCCCCCCACCCGCTGCCGCTACTTCAC
CATCAACTTCAACCCCCCTAGCAGCAGACGCCGCAGGCCCCGCAGCAGTG
CTCACAGCCAAAGCCGCCAGCAGCAGCCTCCCCCTGCCTCGCACCGGCGC
CTTCTATTACGCTATCATCGCACGCGTGTCGGATTTGGAAGCGGTGTTGG
GCGCCACCGCCGTGGCTCTTGCGAAGGCGTGGCTGCGTGATCGCTGGTCC
CTGGACTGGCCTGCCCCGGGCGGCAACGTGCACGTGACGCTGCTGTTCGT
GGCGAACAGCGCGGCGGCGACGGCGCAGGCTGCCACAGTGCAGACGCTGC
ACGAGATGCTTGGTCGGAAGGCTCAGATGATGGTCACGGGCATCGCGTGC
GATGGGCAAGCGGCTGCGCTCACCGTCACAGATCTGCTTCTTGGCAGCAG
CGGCGTGATAGATGGCGGCAGCGGCGGCGGCAGCAGTGCTGATGACGGCG
GTGTCAGTGGCAGCGGTAGCGGCGGCAGTGGCGGCGGTGGCGGCAGCAGC
GGCGGCAACGCAGGTGGCGCTGCCGCTGCCGATGGCGCCATCCCGTGTGT
CAACACCTGCGCGCACATGACGTTGGCTACTGCACCTGGCGTAGCTCCGC
GGCACAGCAACAACATGCTCGAGGGCGGACGCTATGAGTTCCTGGAGCTA
GCGGGGTTTGCGCAGCCTGCGCCGCCGCTGCAGCTTGCCGGCACCGTCGC
GCTGGTGCACAGGCAGAGCCGCATCGCGTGAGAGTGACGCTAGCGCCCGC
TGCGAGTTGTGTCCTCACAATGCGGCTGCCGCACACAGGCAGAGTCGCAG
TGTACTTCAAATGTGAGAGGCGGTACAGTGCGCCGATAGTAGCCTCTACA
GTGCGCCCGTCGGTGCTGCCGGCGCAAGTCCATCCTGGCCTCGCGCTTTC
AGTGCGTGTGCGCAGCAGAGCTACGGCATTGG

Coding sequence (CDS) from alignment at Contig_28:686140..693071+

>mRNA_9016 ID=mRNA_9016|Name=jgi.p|Trimin1|348626|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3126bp|location=Sequence derived from alignment at Contig_28:686140..693071+ (Tribonema minus UTEX_B_3156 )
ATGTGGGAGGCGCGTGTCCTGCTGCAGCTGTTCATGCCGCTGGGGTTCCT
GGGCACTGGCAAGAGCTCCATCGCCAAGGAGCTGCAGCAGCGGCTGGGTG
CAGCGGTGATCAGCTCAGAATATCTGGAAGTTGGCAAGGGCGGCAAGAAG
CAGGCGCGCAGGCTCAAGTCCCAGGAGTACGAGCAGGCCATCAAGACGGC
GCTATGCGCGCAGTACCGCGCCCTCCCTCCACTGCCCCCCCCACCCCCCA
CCGCTCCCCCTGCTGCTACCCCCCCTGGTGCTGCTGCCGGCGATACGAGT
GCTGCCGGTGCTGGCACCACTCCTGCCGCCGCCGCTGCCGCCGCCGCCGC
TGGCGCAACCTCGAATGCAGCCGTAGCCGGTGTCAAGCCTGCTCAGCCTG
CCGCTTCCGCTGCCGCAGCCGCCCCTAGCCCCATGCACGTCGACCAACAG
AGCAGTGGCGAAGGCCACCTCAACAAGCAGCAACTGGGGAGGCGCAGCAA
TGACGGCGCCAGCTCAACTGGGGTTGCTGGTGGCATGCCTGCTGCGGCTG
CGGTCGCTGCTGCTGCTGCTGCCGCTGGCACCAGGCCCGAGCAAGTCAAT
GCGCAGGGGGGCAAAGGCGGGAAGAAGGGGAAGGCGCGGGGGTTTGGAGG
CGACAACAGGCCCCCTGCTGCTGCTGACGTCGCAGGCACTGCTGACGCCC
CCCCCCCTGCGCCTGAGGATGCTATGGAGGTTGAGCGCAGGGGCGGCAAA
GCGCACAGGGGGAAGCGCGGGAACCCCAACAACGGCAATGCAGCGCGCGG
GCAACAGGCGGCGCTGCCGCGCCATGACGATGCTACTTCAAGTGCTGCTA
GTTCAACTGCTCCGAGCACTGCTCCAGCAAGTAGCACGTCCGCTGCTGGC
GCTACGCCTGCTGCAGCGGCGCCTGCTGCAATGGCTGCTGCCGCTGCTGC
GCTGCCTGCGCAGCATCCCCACAACGCAAAGGGGAAGCACGGCAAGGGGG
GCAGGAACGGGGGCACCAGCAATGGGACTGGTGCGGATCAGTCCGACCCT
CGATTGGGTAACGGCGGTGGTGGGCAACAGGGGCAGAACGGACACGATAC
AGCAGGTGCGGGAGCCAAACACGCTCCTGCTGGAGCTAGCGGCAGCAGCA
GCATGGCAGCAGCGACCAGCAGTGGCAGTGCTCAGCAGCATGCGGGAAGC
AGCCGGGGGGGAGGCCGGGGAGTCGGCGTCACCGGCGCGGAGCTCGGCAG
CAGCACACACGACATCATGGAGGTAGACGCAGCAGATCTGCCCGCCCCTG
TGTCAGCAGCGGGCAAGGAGAGTCATCACGCAGTCATTGCAGATGCAGCA
GTGCTCAGCACGAATGGAGGCACGAAGGCGGCTGGGCCTGCGGGTGTGGC
GGCAGCAGCAGGCGCTCAACCGGCGGCGCGCGCCGCAGCGGCGCTCAGCA
CCAGCGTCAGCAGCTCAGCTGCTGCTCAGCCCCCGCCCAGCATCGGTGCG
GTGGCAGCGAGCAGCAGCAACGCGCCGGCAGCGGCGCGGCACCGCGCCCT
CCCCTCGCCGCTAGTAGTGCGCGATAAGAACATTCCGAAGGAGGACCTCT
GGCGCGCAGTAGGCAGCGCTCAGCCGAGCGCTGCCATCGCGTTGGCGTTC
GGAGGCAGCGCGCGTGACTTCGGCAGCGACGCGGCAGCGGCAGCAATGCT
TGGCGCGGTGCCCCCCGTGTCCCCGTGGGAGCTGGCCGTGTGCATGCGGC
GCGTGATGCAGCGCGCGGAGCACCCGAGCATCATGCCGCAGGCGGACATC
ACGCCGGGCCTCGTGTGCCAGTTTGCGTCGCGGCTGGCGGGGGGCTACTA
CTGCTCTGTGACCCCAGGCGGGAAGGTCACCGGCGTCAGTTACAGCCGCT
GGCAGTGGCTCGCCGATATCGCTGACACATTCGGCGGCGCTCACCGCGTC
ATAGGCATACCGCTGTGCCGCCCCGAGCAGTACTCGACAGCGCCGCCGCA
GCCTCTGGCGTCACTTCTTGAAGTTGGCATGTACGCGTGCGGCGGTTTCC
GCGTGGAGGATGACGCATTTGCGGGCATCGCGCAGATACCGGGCGTTAAG
GAGTTGATGGCGAGGGACAGGGCTGCGCGGCGGGGCGCCGGCGACGCGGA
TGGGGGAAAGCACGTCGGCGCACATCAGGCGGCATGGGCGGCTGCTGTCA
GGGCCGCCGTACGCGAAGCCGATGCTGCACTGGGCGCGATGGCTTACGAC
CGCGCGGACGCTGACTTTGTTCGCATACTTGACGATGCCGTGCACAAGAT
CGAAGCACTCCTGACCACCTCAGACGAGCCCACCAACACAGCAGCGCAGA
GTGTCACTGCTCGCCCCCCCCCCCCACCCGCTGCCGCTACTTCACCATCA
ACTTCAACCCCCCTAGCAGCAGACGCCGCAGGCCCCGCAGCAGTGCTCAC
AGCCAAAGCCGCCAGCAGCAGCCTCCCCCTGCCTCGCACCGGCGCCTTCT
ATTACGCTATCATCGCACGCGTGTCGGATTTGGAAGCGGTGTTGGGCGCC
ACCGCCGTGGCTCTTGCGAAGGCGTGGCTGCGTGATCGCTGGTCCCTGGA
CTGGCCTGCCCCGGGCGGCAACGTGCACGTGACGCTGCTGTTCGTGGCGA
ACAGCGCGGCGGCGACGGCGCAGGCTGCCACAGTGCAGACGCTGCACGAG
ATGCTTGGTCGGAAGGCTCAGATGATGGTCACGGGCATCGCGTGCGATGG
GCAAGCGGCTGCGCTCACCGTCACAGATCTGCTTCTTGGCAGCAGCGGCG
TGATAGATGGCGGCAGCGGCGGCGGCAGCAGTGCTGATGACGGCGGTGTC
AGTGGCAGCGGTAGCGGCGGCAGTGGCGGCGGTGGCGGCAGCAGCGGCGG
CAACGCAGGTGGCGCTGCCGCTGCCGATGGCGCCATCCCGTGTGTCAACA
CCTGCGCGCACATGACGTTGGCTACTGCACCTGGCGTAGCTCCGCGGCAC
AGCAACAACATGCTCGAGGGCGGACGCTATGAGTTCCTGGAGCTAGCGGG
GTTTGCGCAGCCTGCGCCGCCGCTGCAGCTTGCCGGCACCGTCGCGCTGG
TGCACAGGCAGAGCCGCATCGCGTGA