mRNA_89 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|149133 vs. uniprot
Match: A0A835YY08_9STRA (ULP_PROTEASE domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY08_9STRA) HSP 1 Score: 363 bits (931), Expect = 3.630e-127 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1 Query: 1 RLRPNEWLSGDVMTGYATLLNEREARRRAVHPRRGRRHVFHSFLYKGMCDNGYERVKKWSTKAKVDVFACSLLVFLCNVNRIHWTVVVARMAQRRLEYFDSLGGDGLAEMNTIESYLQREHADKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYIVDDMPFDFRQDD 522 RLRPNEWLSGDVMTGYATLLNEREARRRAVHPRRGRRHVFHSFLYKGMCDNGYERVKKWSTKAKVDVFACSLLVFLCNVNRIHWTVVVARMAQRRLEYFDSLGGDGLAEMNTIESYLQREHADKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYIVDDMPFDFRQDD Sbjct: 1 RLRPNEWLSGDVMTGYATLLNEREARRRAVHPRRGRRHVFHSFLYKGMCDNGYERVKKWSTKAKVDVFACSLLVFLCNVNRIHWTVVVARMAQRRLEYFDSLGGDGLAEMNTIESYLQREHADKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYIVDDMPFDFRQDD 174
BLAST of jgi.p|Trimin1|149133 vs. uniprot
Match: A0A835ZEF0_9STRA (ULP_PROTEASE domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEF0_9STRA) HSP 1 Score: 320 bits (820), Expect = 3.070e-110 Identity = 153/174 (87.93%), Postives = 162/174 (93.10%), Query Frame = 1 Query: 1 RLRPNEWLSGDVMTGYATLLNEREARRRAVHPRRGRRHVFHSFLYKGMCDNGYERVKKWSTKAKVDVFACSLLVFLCNVNRIHWTVVVARMAQRRLEYFDSLGGDGLAEMNTIESYLQREHADKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYIVDDMPFDFRQDD 522 RLRPNEWLSGDVMTGYATLLNEREARRRAV+ RR RRHVFHSFLY GMC+NGYE VK+WSTKAKVDVFACSLLVFLCNVN HWTVVVARM QRR+EYFDS GG G+AEM+ I SYLQ+EH DKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEY+V+DMPFDFRQDD Sbjct: 1 RLRPNEWLSGDVMTGYATLLNEREARRRAVNDRRSRRHVFHSFLYAGMCNNGYEGVKRWSTKAKVDVFACSLLVFLCNVNGNHWTVVVARMRQRRIEYFDSNGGAGVAEMDMIRSYLQQEHLDKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYVVEDMPFDFRQDD 174
BLAST of jgi.p|Trimin1|149133 vs. uniprot
Match: A0A835ZFD9_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFD9_9STRA) HSP 1 Score: 143 bits (361), Expect = 5.740e-40 Identity = 61/122 (50.00%), Postives = 85/122 (69.67%), Query Frame = 1 Query: 157 YERVKKWSTKAKVDVFACSLLVFLCNVNRIHWTVVVARMAQRRLEYFDSLGGDGLAEMNTIESYLQREHADKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYIVDDMPFDFRQDD 522 Y VK+WSTKAK+DVF ++F N+ +HW + + + ++R+EY DS+ GDGL M+ + Y + EHADKK SPL G+WTR S+ +SPQQ NG DCGVF L A+Y++ ++P DF QDD Sbjct: 77 YNNVKRWSTKAKLDVFEADKILFPHNIGNMHWCLAIVHVQEKRIEYMDSMSGDGLGAMSALFRYFKDEHADKKGSPLKGMWTRYSYRDTSPQQKNGCDCGVFTLPNADYVLGELPLDFHQDD 198
BLAST of jgi.p|Trimin1|149133 vs. uniprot
Match: A0A836CHU4_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHU4_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.200e-34 Identity = 58/144 (40.28%), Postives = 88/144 (61.11%), Query Frame = 1 Query: 94 PRRGRRHVFHSFLYKGMCDNGYER--VKKWSTKAKVDVFACSLLVFLCNVNRIHWTVVVARMAQRRLEYFDSLGGDGLAEMNTIESYLQREHADKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYIVDDMPFDFRQD 519 P+ R H F+S+ + +N Y V++W+ KAKVD+F ++ NV +HW + V + +RR++Y+DS+GG G +N +E +L+ EH DKK +PL WT+ +PQQ NG DCGVF A+YI +D+P +F QD Sbjct: 16 PQLRRSHFFNSYFLSKLTENSYNYPGVRRWTKKAKVDIFTLDKVIMPANVGNMHWCLAVIYVQERRIQYYDSMGGRGTTFLNALERWLEDEHKDKKGAPLGATWTKVPTIDGTPQQENGCDCGVFTCMFADYISEDLPLEFGQD 159
BLAST of jgi.p|Trimin1|149133 vs. uniprot
Match: A0A7S2PD21_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PD21_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.810e-32 Identity = 68/179 (37.99%), Postives = 98/179 (54.75%), Query Frame = 1 Query: 1 RLRPNEWLSGDVMTGYATLLNEREARRRAVHPRRGRRHVFHSFLYKGMCDNG----YERVKKWSTK-AKVDVFACSLLVFLCNVNRIHWTVVVARMAQRRLEYFDSLGGDGLAEMNTIESYLQREHADKKKSPLP-GVWTRRSHGTSSPQQANGVDCGVFALTVAEYIVDDMPFDFRQD 519 RL+P +WL+ +V+ + L R+ + R R H F SF + D Y+ VK+WS K A DVFA +VF NV +HWT VA M +++++++DS+GG G +N + Y + EH DKKK+ L W S +PQQ NG DCGVF A+++ DMP F Q+ Sbjct: 40 RLQPGQWLNDEVIHYFLLCLARRDEQMCKKDTNRKRSHFFKSFFVSKLMDEASGYRYQNVKRWSKKVAGKDVFALDKIVFPINVGGVHWTCAVAFMQEKKIQFYDSMGGGGQRYVNGLLRYFEDEHKDKKKASLDTSEWNLVSCQPDTPQQLNGFDCGVFTCMFADFLSRDMPLIFSQE 218
BLAST of jgi.p|Trimin1|149133 vs. uniprot
Match: A0A835YXA5_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXA5_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.180e-31 Identity = 67/179 (37.43%), Postives = 100/179 (55.87%), Query Frame = 1 Query: 1 RLRPNEWLSGDVMTGYATLLNEREARRRAVHPRRGRRHVFHSFLYK---GMCDNGYERVKKWSTKAKV--DVFACSLLVFLCNVNRIHWTVVVARMAQRRLEYFDSLGGDGLAEMNTIESYLQREHADKKKSPLPGVWTRRSHGTSSPQQANGVDCGVFALTVAEYIVDDMPFDFRQDD 522 RL WL+ +V++ Y LLNER+A+ A P R + H+F G ER+ + +K V DVF+ + N+ +HW +V + R+EY DS+GG G+ M + ++L+ EH +K LP W S+ ++PQQANG DCGVFA ++I++ +PFDFRQDD Sbjct: 27 RLEGTTWLNDEVISAYTWLLNERDAKYCAADPSRRPCYAMHTFFASTLHGSQSKTPERISRALSKYAVPLDVFSLDKWLVPINIGGMHWAAMVVHCQKMRVEYVDSMGGRGIEFMEGMLAFLKYEHRVRKGRELPPGWQMFSYQHTTPQQANGCDCGVFACITMDFIMEGLPFDFRQDD 205
BLAST of jgi.p|Trimin1|149133 vs. uniprot
Match: A0A7S2V080_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V080_9STRA) HSP 1 Score: 119 bits (298), Expect = 6.580e-30 Identity = 66/178 (37.08%), Postives = 94/178 (52.81%), Query Frame = 1 Query: 4 LRPNEWLSGDVMTGYATLLNEREARRRAVHPRRGRRHVFHS--FLYKGMCDNGYE--RVKKWSTKAKVDVFACSLLVFLCNVNRIHWTVVVARMAQRRLEYFDSLGGDGLAEMNTIESYLQREHADKKKSPLP-GVWTRRSHGTSSPQQANGVDCGVFALTVAEYIVDDMPFDFRQDD 522 L P WL +V+ Y LL +RE R A R R VF + F+ + D GY V++W+ + K+DVF+ +V NV +HW + + Q+R++Y+DS+GG G + + YLQ E DKKK L W +PQQ NG DCGVFA A+Y+ + +P F Q D Sbjct: 74 LEPTVWLLDEVINLYINLLEDREKRHMAESGRTTPRAVFMNSFFMARLFVDEGYRYANVRRWTRRRKLDVFSAERVVVPVNVGNMHWCLACVHVPQKRIQYYDSMGGAGRNYLGALAQYLQDEMKDKKKETLDINDWEMVGTVQGTPQQNNGCDCGVFACMFADYVSEGLPLSFSQKD 251
BLAST of jgi.p|Trimin1|149133 vs. uniprot
Match: A0A1Z5KAR9_FISSO (Sentrin-specific protease 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KAR9_FISSO) HSP 1 Score: 120 bits (300), Expect = 1.800e-28 Identity = 66/185 (35.68%), Postives = 94/185 (50.81%), Query Frame = 1 Query: 4 LRPNEWLSGDVMTGYATLLNEREARRRAVHPRRGRRHVFHSFLYKGMCDNG-----------YERVKKWSTKAK-VDVFACSLLVFLCNVNRIHWTVVVARMAQRRLEYFDSLGGDGLAEMNTIESYLQREHADKKKSPLPGV--WTRRSHGTSSPQQANGVDCGVFALTVAEYIVDDMPFDFRQ 516 LRP WL+ +V+ + +L R+ P+R R H F SF + + G Y VK+WS K D+F ++F N N +HW V M +R++++DS+GGDG +N + YL+ EH DKKK PLP W + +P+Q NG DCGVF A++I D P F Q Sbjct: 357 LRPGGWLTDEVIHFFYVMLARRDEEMCKQDPQRKRSHFFKSFFITSLLNEGHANPAKNGTYEYRNVKRWSKKVPGKDIFDLDKIIFPINQNNMHWVCSVIFMQAKRIQFYDSMGGDGCRYLNALFQYLKDEHQDKKKCPLPDEDEWEFIECTSDTPRQRNGFDCGVFTCMFADFISKDCPLLFDQ 541
BLAST of jgi.p|Trimin1|149133 vs. uniprot
Match: D8LMK6_ECTSI (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMK6_ECTSI) HSP 1 Score: 115 bits (288), Expect = 8.790e-27 Identity = 71/183 (38.80%), Postives = 99/183 (54.10%), Query Frame = 1 Query: 4 LRPNEWLSGDVMTGYATLLNEREARRRAVHPRRGRRHVFHSFLY---KGM-CDNGYERVKKWSTKAKVDVFACSLLVFLCNVNRIHWTVVVARMAQRRLEYFDSLGGDGLAEMNTIESYLQREHADKKKSPL---PGVWTRRSHGT---SSPQQANGVDCGVFALTVAEYIVDDMPFDFRQDD 522 LRP WL+ +V+ Y LL+ R+ +P R + H F SF KGM C Y VK+W+ + KV F + NV+ HW + V + Q+R+ Y+DS+GG G + + +L+ E DK P WT + GT S+PQQ NG DCG FA++ A Y+ DD+PFDFRQ D Sbjct: 383 LRPYTWLNDEVVNMYMQLLSCRDKELCKANPSRRQSHFFTSFFLTKLKGMDCKYNYTGVKRWTRRVKV--FEMDKIFVPVNVSNAHWCMAVIFVQQKRINYYDSMGGGGKSVREDLLLWLEDEDEDKNGDNATFEPDDWT--TVGTKVASTPQQENGSDCGAFAVSFASYLSDDLPFDFRQAD 561
BLAST of jgi.p|Trimin1|149133 vs. uniprot
Match: A0A7S3Q661_9STRA (Hypothetical protein n=4 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q661_9STRA) HSP 1 Score: 110 bits (276), Expect = 2.890e-25 Identity = 63/181 (34.81%), Postives = 89/181 (49.17%), Query Frame = 1 Query: 4 LRPNEWLSGDVMTGYATLLNEREARRRAVHPRRGRRHVFHSFLYKGMCDNG------YERVKKWSTK-AKVDVFACSLLVFLCNVNRIHWTVVVARMAQRRLEYFDSLGGDGLAEMNTIESYLQREHADKKKSPLPGV--WTRRSHGTSSPQQANGVDCGVFALTVAEYIVDDMPFDFRQD 519 LR WL+ +V+ + +L++R+ A R R H F SF + + D G Y VK+WS + A D+FA + F CNVN +HWT V M ++R++YFDS+ GDG + Y+ E KK P W P Q NG DCGVF A+++ D P F Q+ Sbjct: 311 LRTGTWLNDEVIHYFFLMLSKRDEALCATDSSRKRSHYFKSFFFTKLFDEGGTNEYRYANVKRWSRRVAGKDIFALDKIFFACNVNGMHWTCAVIFMQEKRIQYFDSMRGDGYMYSEGLLKYIMDEWKTKKGGSFPDADKWKIIGSKGDVPTQRNGFDCGVFTCMFADFLSLDRPLSFTQE 491 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|149133 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_89 ID=mRNA_89|Name=jgi.p|Trimin1|149133|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=522bp|location=Sequence derived from alignment at Contig_3:465508..466029+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CGCCTGCGACCGAACGAGTGGCTCTCTGGTGATGTGATGACCGGTTACGCback to top protein sequence of jgi.p|Trimin1|149133 >Trimin1|149133|gw1.3.355.1 ID=Trimin1|149133|gw1.3.355.1|Name=jgi.p|Trimin1|149133|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=174bp RLRPNEWLSGDVMTGYATLLNEREARRRAVHPRRGRRHVFHSFLYKGMCDback to top mRNA from alignment at Contig_3:465508..466029+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_89 ID=mRNA_89|Name=jgi.p|Trimin1|149133|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=522bp|location=Sequence derived from alignment at Contig_3:465508..466029+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_3:465508..466029+ >mRNA_89 ID=mRNA_89|Name=jgi.p|Trimin1|149133|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=522bp|location=Sequence derived from alignment at Contig_3:465508..466029+ (Tribonema minus UTEX_B_3156 )back to top |