mRNA_8885 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: A0A836CAX1_9STRA (Exonuclease 1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX1_9STRA) HSP 1 Score: 680 bits (1755), Expect = 2.300e-247 Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 1
Query: 1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQNLDFLGPELPPHIAEAIANSTMDPYTREPY 1008
MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQNLDFLGPELPPHIAEAIANSTMDPYTREPY
Sbjct: 1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQNLDFLGPELPPHIAEAIANSTMDPYTREPY 336
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: W7TNX5_9STRA (Exonuclease 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNX5_9STRA) HSP 1 Score: 345 bits (886), Expect = 7.330e-115 Identity = 169/338 (50.00%), Postives = 239/338 (70.71%), Query Frame = 1
Query: 1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRA--SRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQNLDFLGPELPPHIAEAIANSTMDPYTREPY 1008
MGI+GLL LKS+TH VH+R+ +G+ G+DA+CWLHRGA++C TE+ G+ TDK++RFCM R+ +L +G+TP++VFDGA +P K ++ +RR AR AKA A G+ A+ + ++V ITHE+A I+ L ++++VAPYEADAQLA+++++G++D +I+EDSD LP+ C R+LFKL+ +G AQEI R+L+ NE+ GWT +MFLDMCLLAGCDYLP + GLGI TAHKLV +HR++K +L AL ++ A+P D+ +RF ARLTFRH VYDP +VPL P P+ E +L FLGP P +A A+A ++P T + Y
Sbjct: 1 MGIAGLLPLLKSVTHTVHLREYQGMMAGIDAFCWLHRGAFTCCTELVLGKTTDKYIRFCMERVRILQENGITPFMVFDGASIPAKRDLHLSRRAARTEARAKALAVHEEGQIGQARTLFQKAVIITHEMAYELIKCLQEANVRYMVAPYEADAQLAYLARKGVVDLVISEDSDTLPYGCPRVLFKLDKEGRAQEIERRNLALNEDYDFEGWTENMFLDMCLLAGCDYLPNLPGLGIKTAHKLVRQHRTYKKVLGALATPGGKEMAVPGDYMERFARARLTFRHHYVYDPEDGGIVPLTPFTPAHLEL-DLRFLGPRHAPELARAVAEGRLNPDTLQAY 337
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: D7FQX9_ECTSI (Exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX9_ECTSI) HSP 1 Score: 332 bits (852), Expect = 1.190e-106 Identity = 155/288 (53.82%), Postives = 218/288 (75.69%), Query Frame = 1
Query: 1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPR-VHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDP 861
MGI+GLL LKS+T+P H+ + GL GVDAYCWLHRGA+SC E+C G TDK+V FCM+R+ LLL HG+ P +VFDGA LP+K +N RR R +K EAA+AAGE AA QH++++V +TH++A + +++L + G++ VVAPYEADAQLAF+S+ G +D +++EDSDCLP+ CK++LFK++N+G QEI+ R+L++N SL+ W SMFLD+CLL GCDY+P V GLGI TA+KLV RHRS ++ A+ +SR F +P+ + ++++ ARLTFRH +Y+P
Sbjct: 1 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRETARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFLLMKALRQAGVELVVAPYEADAQLAFLSRTGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYIPSSVKGLGIATAYKLVDRHRSLDKIIGAINSSR-FVIPEGYWEQYKRARLTFRHHIIYNP 287
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: A0A2D4BRI3_PYTIN (Exonuclease 1 (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRI3_PYTIN) HSP 1 Score: 306 bits (785), Expect = 1.670e-98 Identity = 153/332 (46.08%), Postives = 214/332 (64.46%), Query Frame = 1
Query: 1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARER--QNLDFLGPELPPHIAEAIANSTMDP 990
MGISGLL LKSIT + G T+ +D YCWLHR Y CS E+C G+ TDK+V + M R++ LL +G+TP+VVFDG PLPMK RR ARA N A++ ++R+ ++ +A I+ L G+K+VVAPYEADAQLAF+ + GL+D +ITEDSDCLPF C ++LFK++ DG AQE++ +L N+ ++ MFL+MC+ +GCDYL + G G+ A+ LV +H S++ ++ ALR K +P+ +E FE A+LTFRHQRVYDP RC+VPL P+ + ++ ++FLGP L +A+AIA MDP
Sbjct: 1 MGISGLLPVLKSITETKDLHSYRGQTLAIDGYCWLHRAIYCCSQELCXGQDTDKYVVYFMERVQALLQNGITPYVVFDGGPLPMKKATEDDRRAARAKNRELGLQYYRQRNYSEARKCFSRAADVSPFMAHRVIQRLKAMGVKYVVAPYEADAQLAFLVRAGLVDGVITEDSDCLPFGCGKVLFKMDRDGVAQEVQTANLKHNKELRFHMFSDDMFLEMCIFSGCDYLASLPGFGLKKAYALVKQHGSYRKIVRALRLEGKVRVPETYEAEFERAKLTFRHQRVYDPTRRCMVPLTPIAAAVTQKFGSEMEFLGPHLADDVAQAIAEGDMDP 332
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: A0A5D6Y0X9_9STRA (Exonuclease 1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0X9_9STRA) HSP 1 Score: 306 bits (785), Expect = 5.780e-96 Identity = 160/337 (47.48%), Postives = 216/337 (64.09%), Query Frame = 1
Query: 1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGS--AQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQ-NLDFLGPELPPHIAEAIANSTMDPYTRE 1002
MGISGLL LKSIT + G T+ +DAY WLHR YSCS EIC G+ TDK+V + M R+++LL +G+TP+VVFDG PLPMK G RR AR N G A++H+ R+ ++ +A I+ L +G+++VVAPYEADAQLA++++ GL D +ITEDSDCLPF C +LFKL+ DG AQEI+ +L N +T++MFL+MC+ +GCDYLP + G G+ A+ + +H S ++ +LR K +P +E FE A LTFRHQRV+DPRS+ +VPL P+P S E+ + FLGP L +A AIA MDP T E
Sbjct: 1 MGISGLLPALKSITDTKPLDSYRGQTLAIDAYVWLHRAIYSCSQEICLGQETDKYVSYFMERVDMLLHNGITPYVVFDGGPLPMKKGTETERRAARQKNRELGIQLFKQGNHAEARKHFTRAADVSPFMAHRVIQRLKAKGVRYVVAPYEADAQLAYLTKNGLADGVITEDSDCLPFGCGTVLFKLDKDGVGLAQEIKECNLKKNTGLQFHMFTHTMFLEMCIFSGCDYLPSLPGFGLKKAYVALKQHGSFAKVIRSLRLEGKVRIPPTYEADFERAVLTFRHQRVFDPRSQQLVPLTPIPESVTEKDPTVGFLGPMLSNAVAVAIAQGDMDPVTME 337
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: A0A1V9ZBX7_9STRA (Exonuclease 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZBX7_9STRA) HSP 1 Score: 300 bits (769), Expect = 3.120e-95 Identity = 151/336 (44.94%), Postives = 222/336 (66.07%), Query Frame = 1
Query: 1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQNLDFLGPELPPHIAEAIANSTMDPYTREPY 1008
MGI+ LL LKSIT + + G TV VD YCWLHRG YSCS E+C G+ T+K+V++ M R+E LL+ G+ P++VFDG LPMK + RR +R + + A+Q + ++V ++ +A I+ L +R +K++VAPYEADAQ+A++++ GL+DA+I+EDSDCLPF C +LFK++ G+ EI +DL++N+ S G++ MFLDMC+L+GCDY+ + GLG+ +H L+ R+ S K ++ +LR K + +E+ FE ARLTFRHQRVYDP ++ +V L PL + E +DFLGP +P IA+ IA MDP T+ P+
Sbjct: 1 MGITNLLPQLKSITTSTTLENYRGKTVAVDGYCWLHRGVYSCSQELCLGQETNKYVKYFMDRVEYLLTCGIVPYIVFDGGYLPMKKLKEEERRSSREKHRESGLQYLENKNYEMARQSFIKAVDVSPLMAHRVIQCLKKRNVKYIVAPYEADAQMAYLARNGLVDAVISEDSDCLPFGCHTVLFKMDQVGNVDEIVLKDLANNKALSFVGFSDDMFLDMCILSGCDYVASIPGLGVKKSHGLLQRYGSWKKVVRSLRLEGKLTIAKSYEEDFERARLTFRHQRVYDPTTQTLVNLTPLESPSSE---MDFLGPIIPDSIAKDIAEGNMDPITQTPF 333
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: G4Z0P5_PHYSP (Exonuclease 1 (Fragment) n=2 Tax=Phytophthora TaxID=4783 RepID=G4Z0P5_PHYSP) HSP 1 Score: 295 bits (756), Expect = 1.300e-94 Identity = 157/334 (47.01%), Postives = 210/334 (62.87%), Query Frame = 1
Query: 1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRS-LARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQ-NLDFLGPELPPHIAEAIANSTMDPYT 996
MGISGLL LKSIT + G T+ +D YCWLHR YSCS EIC G+ TDK+V + M RI LL +GVTP+VVFDG PLPMK G + RR AR N A++ + R+ ++ +A I+ L +++VVAPYEADAQLA++ + GL D +ITEDSDCLPF C+ +LFK++ D AQEI+A +L N+ S +T MFL+MC+ +GCDYLP + G G+ A+ + +H S ++ ALR K +P +ED F A LTFRHQRVY P+ + +VPL P+P + E +DF+GP L IA+AIA+ MDP T
Sbjct: 1 MGISGLLPVLKSITETKSIEQYRGRTLAIDGYCWLHRAIYSCSQEICLGQETDKYVTYFMDRITTLLHNGVTPYVVFDGGPLPMKKGTEEERRKARQKNRELGVQHYNNKRFSEARRCFIRAADVSPYMAHRVIQQHLKAHNVQYVVAPYEADAQLAYLVKNGLADGVITEDSDCLPFGCQTVLFKMDRDNVAQEIQAVNLKKNKGLSFHMFTEQMFLEMCIFSGCDYLPSISGFGLKKAYTAMKQHGSFTKIIRALRLEGKVRIPASYEDDFRKAVLTFRHQRVYCPKKKELVPLTPIPANLLEIDPTMDFVGPMLDSDIAQAIADGDMDPIT 334
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: A0A8K1FJT1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJT1_PYTOL) HSP 1 Score: 301 bits (771), Expect = 7.010e-94 Identity = 155/339 (45.72%), Postives = 216/339 (63.72%), Query Frame = 1
Query: 1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKF----VRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQN-LDFLGPELPPHIAEAIANSTMDPYTRE 1002
MGISGLL LKSIT +R+ G T+ +D YCWLHR YSCS E+C G+ TDK+ + + R+ LL +GVTP+VVFDG PLPMK G + RR +RA N A++ + R+ +T +A I+ L +++VVAPYEADAQL ++ + GL D +ITEDSDCLPF C ++LFK++ DG AQE+R +L N+ S ++ MFL+MC+ +GCDYLP + G+G+ A+ L+ +H S M+ A+R K + +E FE A LTFRHQRVYDPR++ +VPL P+P E+ ++FLGP+L IA+AIA MDP T++
Sbjct: 1 MGISGLLPVLKSITVTKDLREYRGETLAIDGYCWLHRAIYSCSQELCLGQDTDKYGALYIVYFTDRVNALLQNGVTPYVVFDGGPLPMKKGTEEERRASRAKNRELGLKYYQQRNYAEARKCFVRAADVTPYMAHRVIQRLKAMNVQYVVAPYEADAQLTYLMKNGLADGVITEDSDCLPFGCSKVLFKMDRDGVAQEVRTDNLGKNKGMSFHMFSDDMFLEMCIFSGCDYLPSLPGIGLKKAYSLLKQHGSVSKMIRAVRLEGKTRVTSTYEAEFERAFLTFRHQRVYDPRTKKIVPLTPIPSELLEKDAAMEFLGPDLSDDIAQAIAEGDMDPITKD 339
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: D0NJB4_PHYIT (Exonuclease 1 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NJB4_PHYIT) HSP 1 Score: 293 bits (751), Expect = 8.110e-94 Identity = 153/337 (45.40%), Postives = 210/337 (62.31%), Query Frame = 1
Query: 1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQN-LDFLGPELPPHIAEAIANSTMDPYTREPY 1008
MGISGLL LKSIT ++ G T+ +D YCWLHR YSCS EIC G+ TDK+V + M RI LL +GVTP+VVFDG PLPMK G + RR +R N A++ + R+ ++ +A I+ L + + +VVAPYEADAQLA++ + GL D +ITEDSDCLPF C+ +LFK++ D AQEI+ +L N+ S +T MFL+MC+ +GCDYLP + G G+ A+ + +H S ++ ALR K +P +E+ F A LTFRHQRVY P + +VPL P+P + + +DF+GP L +A+AIA MDP T P+
Sbjct: 1 MGISGLLPVLKSITETKNIEAYRGQTLAIDGYCWLHRAIYSCSQEICLGQATDKYVTYFMDRITALLHNGVTPYVVFDGGPLPMKKGTEEERRKSRQKNRELGVQHYNNKRFGEARKCFVRAADVSPYMAHRVIQHLKAQNVAYVVAPYEADAQLAYLVKNGLADGVITEDSDCLPFGCQTVLFKMDRDNIAQEIQTANLKKNKGMSFHMFTEQMFLEMCIFSGCDYLPSIPGFGLKKAYTAMKQHGSFAKIVRALRLEGKVRIPATYEEDFRKAVLTFRHQRVYCPTKKELVPLTPVPANLLKTDPAMDFVGPMLSSDVAKAIAEGDMDPITMTPF 337
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: A0A1V9YDM5_9STRA (Exonuclease 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDM5_9STRA) HSP 1 Score: 295 bits (754), Expect = 3.530e-93 Identity = 148/334 (44.31%), Postives = 217/334 (64.97%), Query Frame = 1
Query: 1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQNLDFLGPELPPHIAEAIANSTMDPYTRE 1002
MGIS LL LKSIT P ++ G TV VD YCWLHRG YSCS E+C G+ +DK++ + M R++ LL+ G+ P++VFDG LPMK + RR R + + AA+Q + ++V ++ +A I+SL +R +++VVAPYEADAQ+A++++ GL+DA+I+EDSDCLPF C +LFK++N G EIR DL+ N+ S G+ MFLDMC+L+GCDY+ + GLG+ +H L+ R+ + + ++ ALR K A+ +E ARLTFRHQRVYDPR++ +V L + P+ + DFLGPE+ +A+ IA +DP + +
Sbjct: 1 MGISNLLPQLKSITTPTNLEAYRGKTVAVDGYCWLHRGVYSCSQELCLGQGSDKYINYFMERVDHLLTCGIIPYIVFDGGYLPMKKLKEEERRSGREKHRTAGLQHLENKNYEAARQCFVKAVDVSPYMAHRVIQSLKKRKVQYVVAPYEADAQMAYLARAGLVDAVISEDSDCLPFGCPTVLFKMDNTGHVDEIRLADLAKNKALSFVGFNDDMFLDMCILSGCDYVASIPGLGVKKSHGLLQRYGTWQKVVRALRLEGKLAITKSYEADVTQARLTFRHQRVYDPRTKTLVTLTEMAPT---KNATDFLGPEISNDVAQLIAEGDLDPISMD 331 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8885 ID=mRNA_8885|Name=jgi.p|Trimin1|154027|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1008bp|location=Sequence derived from alignment at Contig_50:190009..191016- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGGCATATCCGGGCTGCTGCAGACCCTCAAGAGCATCACACACCCTGTback to top protein sequence of jgi.p|Trimin1|154027 >Trimin1|154027|gw1.50.137.1 ID=Trimin1|154027|gw1.50.137.1|Name=jgi.p|Trimin1|154027|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=336bp MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEback to top mRNA from alignment at Contig_50:190009..191016- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8885 ID=mRNA_8885|Name=jgi.p|Trimin1|154027|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1008bp|location=Sequence derived from alignment at Contig_50:190009..191016- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_50:190009..191016- >mRNA_8885 ID=mRNA_8885|Name=jgi.p|Trimin1|154027|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1008bp|location=Sequence derived from alignment at Contig_50:190009..191016- (Tribonema minus UTEX_B_3156 )back to top |