mRNA_8885 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|154027
Unique NamemRNA_8885
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: A0A836CAX1_9STRA (Exonuclease 1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX1_9STRA)

HSP 1 Score: 680 bits (1755), Expect = 2.300e-247
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 1
Query:    1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQNLDFLGPELPPHIAEAIANSTMDPYTREPY 1008
            MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQNLDFLGPELPPHIAEAIANSTMDPYTREPY
Sbjct:    1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQNLDFLGPELPPHIAEAIANSTMDPYTREPY 336          
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: W7TNX5_9STRA (Exonuclease 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNX5_9STRA)

HSP 1 Score: 345 bits (886), Expect = 7.330e-115
Identity = 169/338 (50.00%), Postives = 239/338 (70.71%), Query Frame = 1
Query:    1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRA--SRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQNLDFLGPELPPHIAEAIANSTMDPYTREPY 1008
            MGI+GLL  LKS+TH VH+R+ +G+  G+DA+CWLHRGA++C TE+  G+ TDK++RFCM R+ +L  +G+TP++VFDGA +P K  ++ +RR AR    AKA A    G+   A+  + ++V ITHE+A   I+ L    ++++VAPYEADAQLA+++++G++D +I+EDSD LP+ C R+LFKL+ +G AQEI  R+L+ NE+    GWT +MFLDMCLLAGCDYLP + GLGI TAHKLV +HR++K +L AL     ++ A+P D+ +RF  ARLTFRH  VYDP    +VPL P  P+  E  +L FLGP   P +A A+A   ++P T + Y
Sbjct:    1 MGIAGLLPLLKSVTHTVHLREYQGMMAGIDAFCWLHRGAFTCCTELVLGKTTDKYIRFCMERVRILQENGITPFMVFDGASIPAKRDLHLSRRAARTEARAKALAVHEEGQIGQARTLFQKAVIITHEMAYELIKCLQEANVRYMVAPYEADAQLAYLARKGVVDLVISEDSDTLPYGCPRVLFKLDKEGRAQEIERRNLALNEDYDFEGWTENMFLDMCLLAGCDYLPNLPGLGIKTAHKLVRQHRTYKKVLGALATPGGKEMAVPGDYMERFARARLTFRHHYVYDPEDGGIVPLTPFTPAHLEL-DLRFLGPRHAPELARAVAEGRLNPDTLQAY 337          
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: D7FQX9_ECTSI (Exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX9_ECTSI)

HSP 1 Score: 332 bits (852), Expect = 1.190e-106
Identity = 155/288 (53.82%), Postives = 218/288 (75.69%), Query Frame = 1
Query:    1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPR-VHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDP 861
            MGI+GLL  LKS+T+P H+ +  GL  GVDAYCWLHRGA+SC  E+C G  TDK+V FCM+R+ LLL HG+ P +VFDGA LP+K  +N  RR  R    +K EAA+AAGE  AA QH++++V +TH++A + +++L + G++ VVAPYEADAQLAF+S+ G +D +++EDSDCLP+ CK++LFK++N+G  QEI+ R+L++N   SL+ W  SMFLD+CLL GCDY+P  V GLGI TA+KLV RHRS   ++ A+ +SR F +P+ + ++++ ARLTFRH  +Y+P
Sbjct:    1 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRETARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFLLMKALRQAGVELVVAPYEADAQLAFLSRTGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYIPSSVKGLGIATAYKLVDRHRSLDKIIGAINSSR-FVIPEGYWEQYKRARLTFRHHIIYNP 287          
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: A0A2D4BRI3_PYTIN (Exonuclease 1 (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRI3_PYTIN)

HSP 1 Score: 306 bits (785), Expect = 1.670e-98
Identity = 153/332 (46.08%), Postives = 214/332 (64.46%), Query Frame = 1
Query:    1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARER--QNLDFLGPELPPHIAEAIANSTMDP 990
            MGISGLL  LKSIT    +    G T+ +D YCWLHR  Y CS E+C G+ TDK+V + M R++ LL +G+TP+VVFDG PLPMK      RR ARA N               A++ ++R+  ++  +A   I+ L   G+K+VVAPYEADAQLAF+ + GL+D +ITEDSDCLPF C ++LFK++ DG AQE++  +L  N+      ++  MFL+MC+ +GCDYL  + G G+  A+ LV +H S++ ++ ALR   K  +P+ +E  FE A+LTFRHQRVYDP  RC+VPL P+  +  ++    ++FLGP L   +A+AIA   MDP
Sbjct:    1 MGISGLLPVLKSITETKDLHSYRGQTLAIDGYCWLHRAIYCCSQELCXGQDTDKYVVYFMERVQALLQNGITPYVVFDGGPLPMKKATEDDRRAARAKNRELGLQYYRQRNYSEARKCFSRAADVSPFMAHRVIQRLKAMGVKYVVAPYEADAQLAFLVRAGLVDGVITEDSDCLPFGCGKVLFKMDRDGVAQEVQTANLKHNKELRFHMFSDDMFLEMCIFSGCDYLASLPGFGLKKAYALVKQHGSYRKIVRALRLEGKVRVPETYEAEFERAKLTFRHQRVYDPTRRCMVPLTPIAAAVTQKFGSEMEFLGPHLADDVAQAIAEGDMDP 332          
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: A0A5D6Y0X9_9STRA (Exonuclease 1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0X9_9STRA)

HSP 1 Score: 306 bits (785), Expect = 5.780e-96
Identity = 160/337 (47.48%), Postives = 216/337 (64.09%), Query Frame = 1
Query:    1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGS--AQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQ-NLDFLGPELPPHIAEAIANSTMDPYTRE 1002
            MGISGLL  LKSIT    +    G T+ +DAY WLHR  YSCS EIC G+ TDK+V + M R+++LL +G+TP+VVFDG PLPMK G    RR AR  N          G    A++H+ R+  ++  +A   I+ L  +G+++VVAPYEADAQLA++++ GL D +ITEDSDCLPF C  +LFKL+ DG   AQEI+  +L  N       +T++MFL+MC+ +GCDYLP + G G+  A+  + +H S   ++ +LR   K  +P  +E  FE A LTFRHQRV+DPRS+ +VPL P+P S  E+   + FLGP L   +A AIA   MDP T E
Sbjct:    1 MGISGLLPALKSITDTKPLDSYRGQTLAIDAYVWLHRAIYSCSQEICLGQETDKYVSYFMERVDMLLHNGITPYVVFDGGPLPMKKGTETERRAARQKNRELGIQLFKQGNHAEARKHFTRAADVSPFMAHRVIQRLKAKGVRYVVAPYEADAQLAYLTKNGLADGVITEDSDCLPFGCGTVLFKLDKDGVGLAQEIKECNLKKNTGLQFHMFTHTMFLEMCIFSGCDYLPSLPGFGLKKAYVALKQHGSFAKVIRSLRLEGKVRIPPTYEADFERAVLTFRHQRVFDPRSQQLVPLTPIPESVTEKDPTVGFLGPMLSNAVAVAIAQGDMDPVTME 337          
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: A0A1V9ZBX7_9STRA (Exonuclease 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZBX7_9STRA)

HSP 1 Score: 300 bits (769), Expect = 3.120e-95
Identity = 151/336 (44.94%), Postives = 222/336 (66.07%), Query Frame = 1
Query:    1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQNLDFLGPELPPHIAEAIANSTMDPYTREPY 1008
            MGI+ LL  LKSIT    + +  G TV VD YCWLHRG YSCS E+C G+ T+K+V++ M R+E LL+ G+ P++VFDG  LPMK    + RR +R  +       +       A+Q + ++V ++  +A   I+ L +R +K++VAPYEADAQ+A++++ GL+DA+I+EDSDCLPF C  +LFK++  G+  EI  +DL++N+  S  G++  MFLDMC+L+GCDY+  + GLG+  +H L+ R+ S K ++ +LR   K  +   +E+ FE ARLTFRHQRVYDP ++ +V L PL   + E   +DFLGP +P  IA+ IA   MDP T+ P+
Sbjct:    1 MGITNLLPQLKSITTSTTLENYRGKTVAVDGYCWLHRGVYSCSQELCLGQETNKYVKYFMDRVEYLLTCGIVPYIVFDGGYLPMKKLKEEERRSSREKHRESGLQYLENKNYEMARQSFIKAVDVSPLMAHRVIQCLKKRNVKYIVAPYEADAQMAYLARNGLVDAVISEDSDCLPFGCHTVLFKMDQVGNVDEIVLKDLANNKALSFVGFSDDMFLDMCILSGCDYVASIPGLGVKKSHGLLQRYGSWKKVVRSLRLEGKLTIAKSYEEDFERARLTFRHQRVYDPTTQTLVNLTPLESPSSE---MDFLGPIIPDSIAKDIAEGNMDPITQTPF 333          
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: G4Z0P5_PHYSP (Exonuclease 1 (Fragment) n=2 Tax=Phytophthora TaxID=4783 RepID=G4Z0P5_PHYSP)

HSP 1 Score: 295 bits (756), Expect = 1.300e-94
Identity = 157/334 (47.01%), Postives = 210/334 (62.87%), Query Frame = 1
Query:    1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRS-LARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQ-NLDFLGPELPPHIAEAIANSTMDPYT 996
            MGISGLL  LKSIT    +    G T+ +D YCWLHR  YSCS EIC G+ TDK+V + M RI  LL +GVTP+VVFDG PLPMK G  + RR AR  N               A++ + R+  ++  +A   I+  L    +++VVAPYEADAQLA++ + GL D +ITEDSDCLPF C+ +LFK++ D  AQEI+A +L  N+  S   +T  MFL+MC+ +GCDYLP + G G+  A+  + +H S   ++ ALR   K  +P  +ED F  A LTFRHQRVY P+ + +VPL P+P +  E    +DF+GP L   IA+AIA+  MDP T
Sbjct:    1 MGISGLLPVLKSITETKSIEQYRGRTLAIDGYCWLHRAIYSCSQEICLGQETDKYVTYFMDRITTLLHNGVTPYVVFDGGPLPMKKGTEEERRKARQKNRELGVQHYNNKRFSEARRCFIRAADVSPYMAHRVIQQHLKAHNVQYVVAPYEADAQLAYLVKNGLADGVITEDSDCLPFGCQTVLFKMDRDNVAQEIQAVNLKKNKGLSFHMFTEQMFLEMCIFSGCDYLPSISGFGLKKAYTAMKQHGSFTKIIRALRLEGKVRIPASYEDDFRKAVLTFRHQRVYCPKKKELVPLTPIPANLLEIDPTMDFVGPMLDSDIAQAIADGDMDPIT 334          
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: A0A8K1FJT1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJT1_PYTOL)

HSP 1 Score: 301 bits (771), Expect = 7.010e-94
Identity = 155/339 (45.72%), Postives = 216/339 (63.72%), Query Frame = 1
Query:    1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKF----VRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQN-LDFLGPELPPHIAEAIANSTMDPYTRE 1002
            MGISGLL  LKSIT    +R+  G T+ +D YCWLHR  YSCS E+C G+ TDK+    + +   R+  LL +GVTP+VVFDG PLPMK G  + RR +RA N               A++ + R+  +T  +A   I+ L    +++VVAPYEADAQL ++ + GL D +ITEDSDCLPF C ++LFK++ DG AQE+R  +L  N+  S   ++  MFL+MC+ +GCDYLP + G+G+  A+ L+ +H S   M+ A+R   K  +   +E  FE A LTFRHQRVYDPR++ +VPL P+P    E+   ++FLGP+L   IA+AIA   MDP T++
Sbjct:    1 MGISGLLPVLKSITVTKDLREYRGETLAIDGYCWLHRAIYSCSQELCLGQDTDKYGALYIVYFTDRVNALLQNGVTPYVVFDGGPLPMKKGTEEERRASRAKNRELGLKYYQQRNYAEARKCFVRAADVTPYMAHRVIQRLKAMNVQYVVAPYEADAQLTYLMKNGLADGVITEDSDCLPFGCSKVLFKMDRDGVAQEVRTDNLGKNKGMSFHMFSDDMFLEMCIFSGCDYLPSLPGIGLKKAYSLLKQHGSVSKMIRAVRLEGKTRVTSTYEAEFERAFLTFRHQRVYDPRTKKIVPLTPIPSELLEKDAAMEFLGPDLSDDIAQAIAEGDMDPITKD 339          
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: D0NJB4_PHYIT (Exonuclease 1 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NJB4_PHYIT)

HSP 1 Score: 293 bits (751), Expect = 8.110e-94
Identity = 153/337 (45.40%), Postives = 210/337 (62.31%), Query Frame = 1
Query:    1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQN-LDFLGPELPPHIAEAIANSTMDPYTREPY 1008
            MGISGLL  LKSIT   ++    G T+ +D YCWLHR  YSCS EIC G+ TDK+V + M RI  LL +GVTP+VVFDG PLPMK G  + RR +R  N               A++ + R+  ++  +A   I+ L  + + +VVAPYEADAQLA++ + GL D +ITEDSDCLPF C+ +LFK++ D  AQEI+  +L  N+  S   +T  MFL+MC+ +GCDYLP + G G+  A+  + +H S   ++ ALR   K  +P  +E+ F  A LTFRHQRVY P  + +VPL P+P +  +    +DF+GP L   +A+AIA   MDP T  P+
Sbjct:    1 MGISGLLPVLKSITETKNIEAYRGQTLAIDGYCWLHRAIYSCSQEICLGQATDKYVTYFMDRITALLHNGVTPYVVFDGGPLPMKKGTEEERRKSRQKNRELGVQHYNNKRFGEARKCFVRAADVSPYMAHRVIQHLKAQNVAYVVAPYEADAQLAYLVKNGLADGVITEDSDCLPFGCQTVLFKMDRDNIAQEIQTANLKKNKGMSFHMFTEQMFLEMCIFSGCDYLPSIPGFGLKKAYTAMKQHGSFAKIVRALRLEGKVRIPATYEEDFRKAVLTFRHQRVYCPTKKELVPLTPVPANLLKTDPAMDFVGPMLSSDVAKAIAEGDMDPITMTPF 337          
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Match: A0A1V9YDM5_9STRA (Exonuclease 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDM5_9STRA)

HSP 1 Score: 295 bits (754), Expect = 3.530e-93
Identity = 148/334 (44.31%), Postives = 217/334 (64.97%), Query Frame = 1
Query:    1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQNLDFLGPELPPHIAEAIANSTMDPYTRE 1002
            MGIS LL  LKSIT P ++    G TV VD YCWLHRG YSCS E+C G+ +DK++ + M R++ LL+ G+ P++VFDG  LPMK    + RR  R  +       +      AA+Q + ++V ++  +A   I+SL +R +++VVAPYEADAQ+A++++ GL+DA+I+EDSDCLPF C  +LFK++N G   EIR  DL+ N+  S  G+   MFLDMC+L+GCDY+  + GLG+  +H L+ R+ + + ++ ALR   K A+   +E     ARLTFRHQRVYDPR++ +V L  + P+   +   DFLGPE+   +A+ IA   +DP + +
Sbjct:    1 MGISNLLPQLKSITTPTNLEAYRGKTVAVDGYCWLHRGVYSCSQELCLGQGSDKYINYFMERVDHLLTCGIIPYIVFDGGYLPMKKLKEEERRSGREKHRTAGLQHLENKNYEAARQCFVKAVDVSPYMAHRVIQSLKKRKVQYVVAPYEADAQMAYLARAGLVDAVISEDSDCLPFGCPTVLFKMDNTGHVDEIRLADLAKNKALSFVGFNDDMFLDMCILSGCDYVASIPGLGVKKSHGLLQRYGTWQKVVRALRLEGKLAITKSYEADVTQARLTFRHQRVYDPRTKTLVTLTEMAPT---KNATDFLGPEISNDVAQLIAEGDLDPISMD 331          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|154027 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CAX1_9STRA2.300e-247100.00Exonuclease 1 (Fragment) n=1 Tax=Tribonema minus T... [more]
W7TNX5_9STRA7.330e-11550.00Exonuclease 1 n=1 Tax=Nannochloropsis gaditana Tax... [more]
D7FQX9_ECTSI1.190e-10653.82Exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A2D4BRI3_PYTIN1.670e-9846.08Exonuclease 1 (Fragment) n=1 Tax=Pythium insidiosu... [more]
A0A5D6Y0X9_9STRA5.780e-9647.48Exonuclease 1 n=1 Tax=Pythium brassicum TaxID=1485... [more]
A0A1V9ZBX7_9STRA3.120e-9544.94Exonuclease 1 n=1 Tax=Thraustotheca clavata TaxID=... [more]
G4Z0P5_PHYSP1.300e-9447.01Exonuclease 1 (Fragment) n=2 Tax=Phytophthora TaxI... [more]
A0A8K1FJT1_PYTOL7.010e-9445.72Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0NJB4_PHYIT8.110e-9445.40Exonuclease 1 n=1 Tax=Phytophthora infestans (stra... [more]
A0A1V9YDM5_9STRA3.530e-9344.31Exonuclease 1 n=1 Tax=Achlya hypogyna TaxID=120277... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_50contigContig_50:190009..191016 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|154027|gw1.50.137.1
BRITEko00000,ko00001,ko01000,ko03032,ko03400
KEGG Pathwayko03430,map03430
KEGG koko:K10746
Description5'-3' exodeoxyribonuclease activity
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0258@1|root,KOG2518@2759|Eukaryota
Evalue1.95e-107
Seed ortholog2880.D7FQX9
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHelix-hairpin-helix motif, class 2
Ec32 orthologEc-09_003340.1
TranscriptId154349
TrackFilteredModels1
ProteinId154027
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|154027gene_8885Tribonema minus UTEX_B_3156 geneContig_50 190009..191016 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8885_1exon_8885_1Tribonema minus UTEX_B_3156 exonContig_50 190009..191016 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8885CDS_8885Tribonema minus UTEX_B_3156 CDSContig_50 190009..191016 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|154027Trimin1|154027|gw1.50.137.1Tribonema minus UTEX_B_3156 polypeptideContig_50 190009..191016 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8885 ID=mRNA_8885|Name=jgi.p|Trimin1|154027|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1008bp|location=Sequence derived from alignment at Contig_50:190009..191016- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCATATCCGGGCTGCTGCAGACCCTCAAGAGCATCACACACCCTGT
TCACGTGCGCGACCTCGAGGGCCTCACCGTCGGCGTGGATGCCTACTGCT
GGCTGCACAGGGGGGCATATTCGTGCAGCACAGAGATATGCAGGGGGGAG
TTTACCGACAAGTTCGTGCGCTTCTGCATGCGGCGCATAGAACTGCTGCT
GTCCCATGGCGTCACACCCTGGGTGGTGTTCGATGGCGCACCTCTGCCCA
TGAAGCACGGCGTCAACAAGGCGCGGCGGGATGCGCGCGCCGCCAACCTC
GCCAAGGCCGAGGCTGCTATGGCGGCAGGAGAGCCCATCGCCGCGCAACA
ACACTACGCGCGTTCTGTGGCCATCACCCATGAGCTGGCGCGTATGTTCA
TTCGGTCGCTGGCGAGGAGGGGCATCAAGTTCGTGGTCGCCCCCTATGAG
GCAGACGCTCAGCTGGCGTTCATGTCGCAGCAGGGGCTGATCGACGCCAT
CATCACCGAGGACTCGGACTGCCTGCCGTTCTGCTGCAAGCGCATGCTGT
TCAAGCTGGAGAACGACGGCTCCGCGCAGGAGATCCGCGCGCGCGACCTC
TCCTCCAACGAGAACCCCTCCCTCGCGGGCTGGACGTACAGCATGTTCCT
CGACATGTGCCTGCTCGCCGGCTGCGACTACCTGCCGCGCGTGCACGGCC
TCGGCATCGGCACCGCGCACAAGCTCGTCGCGCGCCACAGGAGCCACAAG
CCCATGCTCGCGGCGCTGCGCGCGTCGCGCAAATTCGCGCTCCCCGACGA
CTTCGAGGACCGCTTCGAGATGGCGCGCCTCACGTTCCGCCACCAGCGCG
TCTACGACCCGCGCTCGCGCTGCGTCGTCCCCCTCATGCCCCTGCCGCCC
TCCGCGCGCGAGCGCCAGAACCTCGACTTCCTGGGCCCCGAGCTGCCCCC
CCACATAGCGGAGGCCATCGCCAACAGCACCATGGATCCGTACACGCGCG
AGCCCTAC
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protein sequence of jgi.p|Trimin1|154027

>Trimin1|154027|gw1.50.137.1 ID=Trimin1|154027|gw1.50.137.1|Name=jgi.p|Trimin1|154027|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=336bp
MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGE
FTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANL
AKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYE
ADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDL
SSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHK
PMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPP
SARERQNLDFLGPELPPHIAEAIANSTMDPYTREPY
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mRNA from alignment at Contig_50:190009..191016-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8885 ID=mRNA_8885|Name=jgi.p|Trimin1|154027|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1008bp|location=Sequence derived from alignment at Contig_50:190009..191016- (Tribonema minus UTEX_B_3156 )
ATGGGCATATCCGGGCTGCTGCAGACCCTCAAGAGCATCACACACCCTGT TCACGTGCGCGACCTCGAGGGCCTCACCGTCGGCGTGGATGCCTACTGCT GGCTGCACAGGGGGGCATATTCGTGCAGCACAGAGATATGCAGGGGGGAG TTTACCGACAAGTTCGTGCGCTTCTGCATGCGGCGCATAGAACTGCTGCT GTCCCATGGCGTCACACCCTGGGTGGTGTTCGATGGCGCACCTCTGCCCA TGAAGCACGGCGTCAACAAGGCGCGGCGGGATGCGCGCGCCGCCAACCTC GCCAAGGCCGAGGCTGCTATGGCGGCAGGAGAGCCCATCGCCGCGCAACA ACACTACGCGCGTTCTGTGGCCATCACCCATGAGCTGGCGCGTATGTTCA TTCGGTCGCTGGCGAGGAGGGGCATCAAGTTCGTGGTCGCCCCCTATGAG GCAGACGCTCAGCTGGCGTTCATGTCGCAGCAGGGGCTGATCGACGCCAT CATCACCGAGGACTCGGACTGCCTGCCGTTCTGCTGCAAGCGCATGCTGT TCAAGCTGGAGAACGACGGCTCCGCGCAGGAGATCCGCGCGCGCGACCTC TCCTCCAACGAGAACCCCTCCCTCGCGGGCTGGACGTACAGCATGTTCCT CGACATGTGCCTGCTCGCCGGCTGCGACTACCTGCCGCGCGTGCACGGCC TCGGCATCGGCACCGCGCACAAGCTCGTCGCGCGCCACAGGAGCCACAAG CCCATGCTCGCGGCGCTGCGCGCGTCGCGCAAATTCGCGCTCCCCGACGA CTTCGAGGACCGCTTCGAGATGGCGCGCCTCACGTTCCGCCACCAGCGCG TCTACGACCCGCGCTCGCGCTGCGTCGTCCCCCTCATGCCCCTGCCGCCC TCCGCGCGCGAGCGCCAGAACCTCGACTTCCTGGGCCCCGAGCTGCCCCC CCACATAGCGGAGGCCATCGCCAACAGCACCATGGATCCGTACACGCGCG AGCCCTAC
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Coding sequence (CDS) from alignment at Contig_50:190009..191016-

>mRNA_8885 ID=mRNA_8885|Name=jgi.p|Trimin1|154027|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1008bp|location=Sequence derived from alignment at Contig_50:190009..191016- (Tribonema minus UTEX_B_3156 )
ATGGGCATATCCGGGCTGCTGCAGACCCTCAAGAGCATCACACACCCTGT
TCACGTGCGCGACCTCGAGGGCCTCACCGTCGGCGTGGATGCCTACTGCT
GGCTGCACAGGGGGGCATATTCGTGCAGCACAGAGATATGCAGGGGGGAG
TTTACCGACAAGTTCGTGCGCTTCTGCATGCGGCGCATAGAACTGCTGCT
GTCCCATGGCGTCACACCCTGGGTGGTGTTCGATGGCGCACCTCTGCCCA
TGAAGCACGGCGTCAACAAGGCGCGGCGGGATGCGCGCGCCGCCAACCTC
GCCAAGGCCGAGGCTGCTATGGCGGCAGGAGAGCCCATCGCCGCGCAACA
ACACTACGCGCGTTCTGTGGCCATCACCCATGAGCTGGCGCGTATGTTCA
TTCGGTCGCTGGCGAGGAGGGGCATCAAGTTCGTGGTCGCCCCCTATGAG
GCAGACGCTCAGCTGGCGTTCATGTCGCAGCAGGGGCTGATCGACGCCAT
CATCACCGAGGACTCGGACTGCCTGCCGTTCTGCTGCAAGCGCATGCTGT
TCAAGCTGGAGAACGACGGCTCCGCGCAGGAGATCCGCGCGCGCGACCTC
TCCTCCAACGAGAACCCCTCCCTCGCGGGCTGGACGTACAGCATGTTCCT
CGACATGTGCCTGCTCGCCGGCTGCGACTACCTGCCGCGCGTGCACGGCC
TCGGCATCGGCACCGCGCACAAGCTCGTCGCGCGCCACAGGAGCCACAAG
CCCATGCTCGCGGCGCTGCGCGCGTCGCGCAAATTCGCGCTCCCCGACGA
CTTCGAGGACCGCTTCGAGATGGCGCGCCTCACGTTCCGCCACCAGCGCG
TCTACGACCCGCGCTCGCGCTGCGTCGTCCCCCTCATGCCCCTGCCGCCC
TCCGCGCGCGAGCGCCAGAACCTCGACTTCCTGGGCCCCGAGCTGCCCCC
CCACATAGCGGAGGCCATCGCCAACAGCACCATGGATCCGTACACGCGCG
AGCCCTAC
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