mRNA_8741 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|146741 vs. uniprot
Match: A0A835YPM5_9STRA (Concanavalin A-like lectin/glucanase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPM5_9STRA) HSP 1 Score: 330 bits (845), Expect = 9.600e-115 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1 Query: 1 AASHFPSVRLAGVGSRLGPIATAGGGWGGRWFYEVVVRTDGLMQVGWADREFGCDPVLGRGVGDHPHSWAYDGYRRKRWCVESAPYGGRWQAGDTVGVLLDADLLEMRFYLNGEDLGVAFVGFQADGIFPAASLNVGQSARFNFGQGPFAYPP 459 AASHFPSVRLAGVGSRLGPIATAGGGWGGRWFYEVVVRTDGLMQVGWADREFGCDPVLGRGVGDHPHSWAYDGYRRKRWCVESAPYGGRWQAGDTVGVLLDADLLEMRFYLNGEDLGVAFVGFQADGIFPAASLNVGQSARFNFGQGPFAYPP Sbjct: 1 AASHFPSVRLAGVGSRLGPIATAGGGWGGRWFYEVVVRTDGLMQVGWADREFGCDPVLGRGVGDHPHSWAYDGYRRKRWCVESAPYGGRWQAGDTVGVLLDADLLEMRFYLNGEDLGVAFVGFQADGIFPAASLNVGQSARFNFGQGPFAYPP 153
BLAST of jgi.p|Trimin1|146741 vs. uniprot
Match: A0A6H5JWE1_9PHAE (B30.2/SPRY domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWE1_9PHAE) HSP 1 Score: 209 bits (531), Expect = 1.220e-59 Identity = 97/153 (63.40%), Postives = 116/153 (75.82%), Query Frame = 1 Query: 1 AASHFPSVRLAGVGSRLGPIATAGGGWGGRWFYEVVVRTDGLMQVGWADREFGCDPVLGRGVGDHPHSWAYDGYRRKRWCVESAPYGGRWQAGDTVGVLLDADLLEMRFYLNGEDLGVAFVGFQADGIFPAASLNVGQSARFNFGQGPFAYPP 459 A+SHFP++RL+ VG +G +T GGRW+YEV + T GLMQ+GWA F C P G+GVGDH HSWA+DG+R+KRWCV SAPYG RW+AGD VGVLLD L EMRF LNG DLGVAF GF+ G++PAAS+NVGQ A FNFG PF +PP Sbjct: 37 ASSHFPTIRLSHVG--VGLRST-----GGRWYYEVTLLTGGLMQLGWAGPLFQCSPARGQGVGDHMHSWAFDGFRQKRWCVSSAPYGKRWRAGDVVGVLLDTGLQEMRFSLNGRDLGVAFAGFEMGGLYPAASMNVGQGAHFNFGHAPFLFPP 182
BLAST of jgi.p|Trimin1|146741 vs. uniprot
Match: A0A7R9YBE2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBE2_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.910e-47 Identity = 78/151 (51.66%), Postives = 100/151 (66.23%), Query Frame = 1 Query: 10 HFPSVRLAGVGSRLGPIATAGGGWGGRWFYEVVVRTDGLMQVGWADREFGCDPVLGRGVGDHPHSWAYDGYRRKRWCVESAPYGGRWQAGDTVGVLLDADLLEMRFYLNGEDLGVAFVGFQADG--IFPAASLNVGQSARFNFGQGPFAYP 456 HFP+V+LA G G GRW+YEV + +DGLMQ+G+A + F CD G+G GDH HSWA+DG+R RW V + YG RW AG+ VG LLD DL E+RF+LNG+DLG+AF ADG + P S N+ Q+A+ NFGQ PF +P Sbjct: 200 HFPTVQLASCGLWPGT---------GRWYYEVTLLSDGLMQIGFAAKSFACDSFRGQGCGDHRHSWAFDGFRCNRWNVVATTYGSRWHAGNVVGCLLDTDLAEIRFFLNGKDLGLAFDNIDADGHALAPTVSFNIDQAAKLNFGQEPFEFP 341
BLAST of jgi.p|Trimin1|146741 vs. uniprot
Match: T0Q8S5_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q8S5_SAPDV) HSP 1 Score: 164 bits (414), Expect = 6.980e-44 Identity = 77/151 (50.99%), Postives = 96/151 (63.58%), Query Frame = 1 Query: 10 HFPSVRLAGVGSRLGPIATAGGGWGGRWFYEVVVRTDGLMQVGWADREFGCDPVLGRGVGDHPHSWAYDGYRRKRWCVESAPYGGRWQAGDTVGVLLDADLLEMRFYLNGEDLGVAFVGFQ-ADGIFPAASLNVGQSARFNFGQGPFAYPP 459 HFP+++L GV G G WFYEVV+ TDGLMQ+GW D F + + G+GVGDH +SWAYDG+RRK+W V + YG RW GD VGVLLD D EM ++LNG LGVAF G +FPA SLNV Q+ + +F + F Y P Sbjct: 2207 HFPTIKLTGVSITAGT---------GMWFYEVVLLTDGLMQIGWVDTAFEANAIQGQGVGDHTNSWAYDGFRRKKWNVGALEYGDRWHVGDVVGVLLDTDRFEMTYFLNGRSLGVAFEGLHLTHALFPAMSLNVDQAVQLHFAKNQFLYCP 2348
BLAST of jgi.p|Trimin1|146741 vs. uniprot
Match: A0A1V9ZFD7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZFD7_9STRA) HSP 1 Score: 162 bits (410), Expect = 2.410e-43 Identity = 76/151 (50.33%), Postives = 97/151 (64.24%), Query Frame = 1 Query: 10 HFPSVRLAGVGSRLGPIATAGGGWGGRWFYEVVVRTDGLMQVGWADREFGCDPVLGRGVGDHPHSWAYDGYRRKRWCVESAPYGGRWQAGDTVGVLLDADLLEMRFYLNGEDLGVAFVGFQ-ADGIFPAASLNVGQSARFNFGQGPFAYPP 459 HFP+++L GV G G W+YEVV+ TDGLMQ+GW D F + + G+GVGDH +SWAYDG+RRK+W V + YG RW GD VGVLLD D EM+++LNG LGVAF G +FPA SLNV Q+ + +F + F Y P Sbjct: 2207 HFPTIKLTGVSITAGT---------GMWYYEVVLLTDGLMQIGWIDSAFDSNAIQGQGVGDHTNSWAYDGFRRKKWNVGALDYGDRWHVGDVVGVLLDTDRFEMQYFLNGRALGVAFEGLHLTHALFPAMSLNVDQAVQLHFAKNQFLYCP 2348
BLAST of jgi.p|Trimin1|146741 vs. uniprot
Match: W4H6C1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6C1_9STRA) HSP 1 Score: 161 bits (407), Expect = 6.110e-43 Identity = 78/151 (51.66%), Postives = 102/151 (67.55%), Query Frame = 1 Query: 10 HFPSVRLAGVGSRLGPIATAGGGWGGRWFYEVVVRTDGLMQVGWADREFGCDPVLGRGVGDHPHSWAYDGYRRKRWCVESAPYGGRWQAGDTVGVLLDADLLEMRFYLNGEDLGVAFVGFQADG-IFPAASLNVGQSARFNFGQGPFAYPP 459 HFP+V+L GV TAG G W+YEVV+ +DGLMQ+GW D F D + G+GVGDH +SWA+DG+RRK+W V + YG +WQ+GD VGVLLD D EM ++LNG LG+AF G + + ++PA SLNV QS +F+F F Y P Sbjct: 2248 HFPTVKLNGVS------VTAGSG---MWYYEVVLLSDGLMQIGWIDSGFESDALQGQGVGDHANSWAFDGFRRKKWNVGAMDYGEKWQSGDVVGVLLDTDRCEMHYFLNGRSLGIAFEGLRLNHPVYPAMSLNVDQSVQFHFTASQFLYLP 2389
BLAST of jgi.p|Trimin1|146741 vs. uniprot
Match: A0A485KUQ5_9STRA (Aste57867_11869 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUQ5_9STRA) HSP 1 Score: 159 bits (401), Expect = 3.920e-42 Identity = 76/151 (50.33%), Postives = 99/151 (65.56%), Query Frame = 1 Query: 10 HFPSVRLAGVGSRLGPIATAGGGWGGRWFYEVVVRTDGLMQVGWADREFGCDPVLGRGVGDHPHSWAYDGYRRKRWCVESAPYGGRWQAGDTVGVLLDADLLEMRFYLNGEDLGVAFVGFQAD-GIFPAASLNVGQSARFNFGQGPFAYPP 459 HFP+V+L GV G W+YEVV+ +DGLMQ+GW D F D + G+GVGDH +SWAYDG+RRK+W V + YG RW +GD +GVLLD D EM++++NG LGVAF G + + +FPA SLNV QS +F+F F Y P Sbjct: 2204 HFPTVKLNGVSITADT---------GIWYYEVVLLSDGLMQIGWIDTLFESDALQGQGVGDHTNSWAYDGFRRKKWNVGALDYGERWHSGDVIGVLLDTDRYEMQYFINGRPLGVAFEGLRLNHAVFPAMSLNVDQSVQFHFTANQFLYLP 2345
BLAST of jgi.p|Trimin1|146741 vs. uniprot
Match: A0A024UHM2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UHM2_9STRA) HSP 1 Score: 158 bits (400), Expect = 5.270e-42 Identity = 81/153 (52.94%), Postives = 103/153 (67.32%), Query Frame = 1 Query: 10 HFPSVRLAGVGSRLGPIATAGGGWGGRWFYEVVVRTDGLMQVGWADREFGCDPVLGRGVGDHPHSWAYDG--YRRKRWCVESAPYGGRWQAGDTVGVLLDADLLEMRFYLNGEDLGVAFVGFQADG-IFPAASLNVGQSARFNFGQGPFAYPP 459 HFP+V+L GV TAG G W+YEVV+ +DGLMQ+GW D F D + G+GVGDH +SWAYDG +RRK+W V + YG +W +GD VGVLLD D EM+++LNG LGVAF G + + I+PA SLNV QSA+F+F F Y P Sbjct: 787 HFPTVKLNGVS------VTAGSG---MWYYEVVLLSDGLMQIGWIDSAFESDALQGQGVGDHTNSWAYDGTRFRRKKWNVGAMDYGEKWHSGDIVGVLLDTDRCEMQYFLNGRPLGVAFEGLRLNHPIYPAMSLNVDQSAQFHFTSSQFLYLP 930
BLAST of jgi.p|Trimin1|146741 vs. uniprot
Match: A0A1V9ZB35_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZB35_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.350e-41 Identity = 74/151 (49.01%), Postives = 98/151 (64.90%), Query Frame = 1 Query: 10 HFPSVRLAGVGSRLGPIATAGGGWGGRWFYEVVVRTDGLMQVGWADREFGCDPVLGRGVGDHPHSWAYDGYRRKRWCVESAPYGGRWQAGDTVGVLLDADLLEMRFYLNGEDLGVAFVGFQAD-GIFPAASLNVGQSARFNFGQGPFAYPP 459 HFP+V+L GV G G WFYEVV+ TDGLMQ+GW D F + + G+GVGDH +SWAYDG+R+K+W V + YG RW+ GD +GVLLD D EM+++LNG LG+AF G + +FPA SLNV Q+ + + + F Y P Sbjct: 2215 HFPTVKLNGVSITAGT---------GMWFYEVVLLTDGLMQIGWIDTAFEANAIQGQGVGDHTNSWAYDGFRKKKWNVGALDYGDRWRVGDAIGVLLDTDRFEMQYFLNGRPLGIAFEGLHLNHAMFPAISLNVDQAIQLHCTKNQFLYFP 2356
BLAST of jgi.p|Trimin1|146741 vs. uniprot
Match: A0A6G0XW75_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XW75_9STRA) HSP 1 Score: 155 bits (392), Expect = 6.280e-41 Identity = 75/151 (49.67%), Postives = 101/151 (66.89%), Query Frame = 1 Query: 10 HFPSVRLAGVGSRLGPIATAGGGWGGRWFYEVVVRTDGLMQVGWADREFGCDPVLGRGVGDHPHSWAYDGYRRKRWCVESAPYGGRWQAGDTVGVLLDADLLEMRFYLNGEDLGVAFVGFQADG-IFPAASLNVGQSARFNFGQGPFAYPP 459 HFP+V+L GV G G W+YEVV+ ++GLMQ+GW D F D + G+GVGDH +SWAYDG+R+K+W VE+ YG +W++GD VGVLLD+D EM+++LNG LGVAF + + + PA SLNV QSA+ +F F Y P Sbjct: 779 HFPTVKLNGVSISAGT---------GIWYYEVVLLSEGLMQIGWIDSAFESDALQGQGVGDHTNSWAYDGFRQKKWNVEAMDYGEKWRSGDVVGVLLDSDRCEMQYFLNGRPLGVAFEDLRLNHPLVPAISLNVDQSAQLHFTANQFLYLP 920 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|146741 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8741 ID=mRNA_8741|Name=jgi.p|Trimin1|146741|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=459bp|location=Sequence derived from alignment at Contig_61:653917..655391- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GCCGCCTCTCACTTCCCCTCCGTGCGACTGGCCGGTGTGGGGTCCCGACTback to top protein sequence of jgi.p|Trimin1|146741 >Trimin1|146741|gw1.61.146.1 ID=Trimin1|146741|gw1.61.146.1|Name=jgi.p|Trimin1|146741|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=153bp AASHFPSVRLAGVGSRLGPIATAGGGWGGRWFYEVVVRTDGLMQVGWADRback to top mRNA from alignment at Contig_61:653917..655391- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8741 ID=mRNA_8741|Name=jgi.p|Trimin1|146741|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1475bp|location=Sequence derived from alignment at Contig_61:653917..655391- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_61:653917..655391- >mRNA_8741 ID=mRNA_8741|Name=jgi.p|Trimin1|146741|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=459bp|location=Sequence derived from alignment at Contig_61:653917..655391- (Tribonema minus UTEX_B_3156 )back to top |