mRNA_8693 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|81161
Unique Name	mRNA_8693
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|81161 vs. uniprot
Match: A0A836C9P9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9P9_9STRA)

HSP 1 Score: 310 bits (795), Expect = 5.890e-106
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1

Query:    1 QARAAEAAQAAAELRRQVKAEKDERAKGVKQLAQLQSQLQRETRAREAAEAALNDVKTRVTDMGRDLQAAERMVKAADAEKKGLEAKLQRAQDDALRAKSAAARDQTVKREEDGGWRQEQARLEGQVRRLERQKVELIGAFRKQLKLIDVLRRQRAHVEAARALAFTEEEFLRTLDWAKDA 543
            QARAAEAAQAAAELRRQVKAEKDERAKGVKQLAQLQSQLQRETRAREAAEAALNDVKTRVTDMGRDLQAAERMVKAADAEKKGLEAKLQRAQDDALRAKSAAARDQTVKREEDGGWRQEQARLEGQVRRLERQKVELIGAFRKQLKLIDVLRRQRAHVEAARALAFTEEEFLRTLDWAKDA
Sbjct:    1 QARAAEAAQAAAELRRQVKAEKDERAKGVKQLAQLQSQLQRETRAREAAEAALNDVKTRVTDMGRDLQAAERMVKAADAEKKGLEAKLQRAQDDALRAKSAAARDQTVKREEDGGWRQEQARLEGQVRRLERQKVELIGAFRKQLKLIDVLRRQRAHVEAARALAFTEEEFLRTLDWAKDA 181

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BLAST of jgi.p|Trimin1|81161 vs. uniprot
Match: A0A7S2WAA6_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAA6_9STRA)

HSP 1 Score: 107 bits (266), Expect = 3.220e-24
Identity = 59/113 (52.21%), Postives = 86/113 (76.11%), Query Frame = 1

Query:  193 RDLQAAERMVKAADAEKKGLEAKLQRAQDDALRAKSAAARDQTVKREEDGGWRQEQARLEGQVRRLERQKVELIGAFRKQLKLIDVLRRQRAHVEAARALAFTEEEFLRTLDW 531
            RD+++A+R V++AD+E +  + +L RA D+A + +   A +++ K EE    R+E  RLE +  +L+RQKVEL+ A RKQLKLIDVL+RQ+ H+EAARAL+FTEEEF++TLDW
Sbjct:  241 RDMESAQRSVRSADSESRNRDLRLNRALDEAKKCREKLAEERSTKAEEIDDCRKEIRRLEARASKLDRQKVELLSASRKQLKLIDVLKRQKIHIEAARALSFTEEEFMKTLDW 353

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BLAST of jgi.p|Trimin1|81161 vs. uniprot
Match: A0A7S2V6Y7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6Y7_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 2.930e-22
Identity = 68/167 (40.72%), Postives = 105/167 (62.87%), Query Frame = 1

Query:   34 AELRRQVKAEKDERAKGVKQLAQLQSQLQRETRAREAAEAALNDVKTRVTDMGRDLQAAERMVKAADAEKKGLEAKLQRAQDDALRAKSAAARDQTVKREEDGGWRQEQAR-LEGQVRRLERQKVELIGAFRKQLKLIDVLRRQRAHVEAARALAFTEEEFLRTLDW 531
            A+L++QVK E   R +  K+    +  +++  + + AA+ +   ++ ++     +L  A+R ++ +D   K L+ +L RA +D  R K AA  DQ   R ++   +Q+ AR LE + RRLERQK EL  AFRKQ+KLID+L+RQ+ H+EAA+ L FTEEEFL+ LDW
Sbjct:   35 ADLQKQVKLESSARKREQKEHQAFRQDMEQGHKKQRAAQDSAGALRQQLAAQKEELATAKRAMRQSDERAKALDLRLNRALEDVERYKKAAC-DQQDDRRDNSAQQQKTARELEAKCRRLERQKSELFTAFRKQMKLIDILKRQKVHIEAAKLLQFTEEEFLKILDW 200

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BLAST of jgi.p|Trimin1|81161 vs. uniprot
Match: A0A7S0UKH2_9CHLO (Hypothetical protein n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UKH2_9CHLO)

HSP 1 Score: 94.7 bits (234), Expect = 2.250e-19
Identity = 64/164 (39.02%), Postives = 105/164 (64.02%), Query Frame = 1

Query:   37 ELRRQVKAEKDERAKGVKQLAQLQSQLQRETRAREAAEAALNDVKTRVTDMGRDLQAAERMVKAADAEKKGLEAKLQRAQDDALRAKSAAARDQTVKREEDGGWRQEQARLEGQVRRLERQKVELIGAFRKQLKLIDVLRRQRAHVEAARALAFTEEEFLRTLD 528
            EL +++KA + E+    ++   L+ QL R  +    AEAAL   + +  +M +     ER  + ADAE++G + +L RA ++  + ++  A  ++  RE     R E ++L+ ++++LERQ+ EL+ AFRKQ++LI++LRRQR H+EA+RAL FTEEEFL+ LD
Sbjct:  262 ELLKELKAVRAEKEGWARERKNLELQLDRAKKTASEAEAALQGHEQKAREMAKAEGKLERDRRQADAEQRGKDVRLTRALEELEKYRTLLAEAKSQDREGKDSARAEVSKLQTEIKKLERQRTELLAAFRKQMRLIELLRRQRVHLEASRALQFTEEEFLKILD 425

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BLAST of jgi.p|Trimin1|81161 vs. uniprot
Match: A0A150GM17_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GM17_GONPE)

HSP 1 Score: 87.8 bits (216), Expect = 1.870e-18
Identity = 66/164 (40.24%), Postives = 99/164 (60.37%), Query Frame = 1

Query:   37 ELRRQVKAEKDERAKGVKQLAQLQSQLQRETRAREAAEAALNDVKTRVTDMGRDLQAAERMVKAADAEKKGLEAKLQRAQDDALRAKSAAARDQTVKREEDGGWRQEQARLEGQVRRLERQKVELIGAFRKQLKLIDVLRRQRAHVEAARALAFTEEEFLRTLD 528
            E  R++K  +++ A   ++   L+SQL R  R    AE+A          + +    AER  +AA+AE +  + +LQRA ++  R K      +  +R+  G   Q+  RL  + R+LERQ+ ELI AF+KQLKLI+VL+RQ+ H+EAARAL F+EEEFL+TL+
Sbjct:    2 ETLRELKDLRNQAANWAREKKSLESQLDRAKRQAAEAESAXXXXXXXXXXLAKADSRAERDRRAAEAEVRARDVRLQRALEEVERYKQLLNEVRAQERDAKGSAAQDTGRLLTENRKLERQRSELITAFKKQLKLIEVLKRQKVHLEAARALQFSEEEFLKTLE 165

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BLAST of jgi.p|Trimin1|81161 vs. uniprot
Match: A0A2K3DSS2_CHLRE (Uncharacterized protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DSS2_CHLRE)

HSP 1 Score: 91.7 bits (226), Expect = 2.380e-18
Identity = 62/142 (43.66%), Postives = 92/142 (64.79%), Query Frame = 1

Query:  103 LQSQLQRETRAREAAEAALNDVKTRVTDMGRDLQAAERMVKAADAEKKGLEAKLQRAQDDALRAKSAAARDQTVKREEDGGWRQEQARLEGQVRRLERQKVELIGAFRKQLKLIDVLRRQRAHVEAARALAFTEEEFLRTLD 528
            L+ QL+R  R    AEAA    + +V ++ +    AER  KA +AE +  + +LQRA ++  R K   +  ++ +RE  G    +  RL  + R+LERQ+ ELI AF+KQLKLI+VL+RQ+ H+EAARAL F+EEEF++TL+
Sbjct:  256 LEVQLERSKRQAADAEAAARSTEGQVRELAKADSRAERERKAVEAEVRARDIRLQRALEEVERYKQLLSEVRSQEREAKGSAAADTGRLLAENRKLERQRGELITAFKKQLKLIEVLKRQKVHLEAARALQFSEEEFMKTLE 397

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BLAST of jgi.p|Trimin1|81161 vs. uniprot
Match: A0A6U6JT90_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6JT90_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 4.010e-18
Identity = 60/164 (36.59%), Postives = 96/164 (58.54%), Query Frame = 1

Query:   40 LRRQVKAEKDERAKGVKQLAQLQSQLQRETRAREAAEAALNDVKTRVTDMGRDLQAAERMVKAADAEKKGLEAKLQRAQDDALRAKSAAARDQTVKREEDGGWRQEQARLEGQVRRLERQKVELIGAFRKQLKLIDVLRRQRAHVEAARALAFTEEEFLRTLDW 531
            LR Q+K    ER +  K LA+ +S   +     ++    ++D+K  ++   R+L       K A++E    E +L RA  +  + K + A   T  R++D   ++E+ RL   ++ LERQK EL+ AF+KQLKLID+L+RQ+ H EAA+ L FTEEEF++ ++W
Sbjct:  185 LRLQLKESSQERKRLQKALAEAKSLAGKRKTEEKSTRTIMDDLKMELSQTKRELTTXXXXXKVAESEHNKREIRLSRALQEVEKYKQSVASRVTETRQDDEDVKREKGRLLANIKSLERQKAELLTAFKKQLKLIDILKRQKVHAEAAKLLQFTEEEFMKVIEW 348

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BLAST of jgi.p|Trimin1|81161 vs. uniprot
Match: UPI000F0A3F4F (testis-expressed protein 9 isoform X1 n=3 Tax=Electrophorus electricus TaxID=8005 RepID=UPI000F0A3F4F)

HSP 1 Score: 90.5 bits (223), Expect = 7.160e-18
Identity = 63/170 (37.06%), Postives = 105/170 (61.76%), Query Frame = 1

Query:   40 LRRQVKAEKDERAKGVKQLAQLQSQLQRETRAREAAEAALNDVKTRVTDMGRDLQAAERMVKAADAEKKGLEAKLQRAQDDALRAKSAAARDQTVKREEDGGWRQEQARLEG---QVRRLERQKVELIGAFRKQLKLIDVLRRQRAHVEAARALAFTEEEFLRTLDWAKD 540
            L R++K  +DERA+  K     Q+QL++     E A    + ++ +VT + ++L+  +R  K A +    +E +L RA ++A ++K+  ++   +K+       QEQ R+E    + ++LE+QK EL+  F+KQLKLID+L+RQ+ H EAA+ L+FTEEEF++ LDW K 
Sbjct:  258 LCRKLKEVEDERARLQKSYNMQQTQLEKHRALAEEAGKNSDSLRQQVTTLQKELEGMKRAQKQAASAHSAMEVRLNRALEEAEKSKTDLSK---LKQSSKDSANQEQHRIEALQTENKKLEKQKAELVMGFKKQLKLIDILKRQKMHFEAAKMLSFTEEEFMKALDWGKS 424

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BLAST of jgi.p|Trimin1|81161 vs. uniprot
Match: A0A7S0SZ95_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SZ95_9CHLO)

HSP 1 Score: 89.7 bits (221), Expect = 9.090e-18
Identity = 56/142 (39.44%), Postives = 87/142 (61.27%), Query Frame = 1

Query:  103 LQSQLQRETRAREAAEAALNDVKTRVTDMGRDLQAAERMVKAADAEKKGLEAKLQRAQDDALRAKSAAARDQTVKREEDGGWRQEQARLEGQVRRLERQKVELIGAFRKQLKLIDVLRRQRAHVEAARALAFTEEEFLRTLD 528
            LQ+ +++E  A  AA  +    +    ++ R+ + A R  K+ + E K  + +L RA ++  R +      +   +  D G RQE  RL G+ +RLERQK EL+ AF+KQ+KLIDVL++Q+ H+EAAR L F EE+F++TLD
Sbjct:  224 LQASIEKEKHAAAAARVSAEARERECAELRRESERASRGAKSGEQEMKARDVRLNRALEEVERYRHQLEAARDASKGGDAGARQEAERLAGENKRLERQKTELVAAFKKQMKLIDVLKKQKIHMEAARMLQFAEEDFMKTLD 365

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BLAST of jgi.p|Trimin1|81161 vs. uniprot
Match: C1N7Y8_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N7Y8_MICPC)

HSP 1 Score: 89.7 bits (221), Expect = 1.300e-17
Identity = 68/164 (41.46%), Postives = 94/164 (57.32%), Query Frame = 1

Query:   37 ELRRQVKAEKDERAKGVKQLAQLQSQLQRETRAREAAEAALNDVKTRVTDMGRDLQAAERMVKAADAEKKGLEAKLQRAQDDALRAKSAAARDQTVKREEDGGWRQEQARLEGQVRRLERQKVELIGAFRKQLKLIDVLRRQRAHVEAARALAFTEEEFLRTLD 528
            EL   + A  D R    K     Q+   +E +A   A A L   +    ++ R++  A R  KAA+ E K  + +L RA +DA R K A A      +  +   R E  +L G+ +RLERQK EL+ AF+KQ+KLIDVL+RQ+ HVEAAR+L F EE+F+RTLD
Sbjct:  254 ELHPDIIARVDPRPSAAKAQKTQQTAADKERKAALDARAQLEAKERECAELRREMDRASRANKAAETEFKTRDVRLNRALEDAERYKGAEAA-----KGGNASTRAEADKLRGENKRLERQKAELVAAFKKQMKLIDVLKRQKIHVEAARSLQFAEEDFMRTLD 412

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|81161 vs. uniprot

BLAST of jgi.p|Trimin1|81161 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836C9P9_9STRA	5.890e-106	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2WAA6_9STRA	3.220e-24	52.21	Hypothetical protein n=2 Tax=Rhizochromulina marin...	[more]
A0A7S2V6Y7_9STRA	2.930e-22	40.72	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S0UKH2_9CHLO	2.250e-19	39.02	Hypothetical protein n=1 Tax=Polytomella parva Tax...	[more]
A0A150GM17_GONPE	1.870e-18	40.24	Uncharacterized protein n=1 Tax=Gonium pectorale T...	[more]
A0A2K3DSS2_CHLRE	2.380e-18	43.66	Uncharacterized protein n=4 Tax=Chlamydomonas TaxI...	[more]
A0A6U6JT90_9STRA	4.010e-18	36.59	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
UPI000F0A3F4F	7.160e-18	37.06	testis-expressed protein 9 isoform X1 n=3 Tax=Elec...	[more]
A0A7S0SZ95_9CHLO	9.090e-18	39.44	Hypothetical protein n=1 Tax=Mantoniella antarctic...	[more]
C1N7Y8_MICPC	1.300e-17	41.46	Predicted protein n=1 Tax=Micromonas pusilla (stra...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_61	contig	Contig_61:336622..340878 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|81161\|CE81160_46
Max annot lvl	3041\|Chlorophyta
EggNOG OGs	28H83@1\|root,2QPKV@2759\|Eukaryota,37XWR@33090\|Viridiplantae,34IUJ@3041\|Chlorophyta
Evalue	2.47e-19
Seed ortholog	3055.EDO99962
Hectar predicted targeting category	other localisation
TranscriptId	81483
Track	FilteredModels1
ProteinId	81161

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|81161	gene_8693	Tribonema minus UTEX_B_3156	gene	Contig_61 336622..340878 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|81161	Trimin1\|81161\|CE81160_46	Tribonema minus UTEX_B_3156	polypeptide	Contig_61 336622..340837 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_8693_1	exon_8693_1	Tribonema minus UTEX_B_3156	exon	Contig_61 336622..336735 +
exon_8693_2	exon_8693_2	Tribonema minus UTEX_B_3156	exon	Contig_61 337882..337971 +
exon_8693_3	exon_8693_3	Tribonema minus UTEX_B_3156	exon	Contig_61 338376..338426 +
exon_8693_4	exon_8693_4	Tribonema minus UTEX_B_3156	exon	Contig_61 339168..339290 +
exon_8693_5	exon_8693_5	Tribonema minus UTEX_B_3156	exon	Contig_61 340670..340878 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_8693	CDS_8693	Tribonema minus UTEX_B_3156	CDS	Contig_61 336622..336735 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_8693	UTR3_8693	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_61 340838..340878 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_61:336622..340878+
coding sequence from alignment at Contig_61:336622..340878+

spliced messenger RNA

>mRNA_8693 ID=mRNA_8693|Name=jgi.p|Trimin1|81161|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=587bp|location=Sequence derived from alignment at Contig_61:336622..340878+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CAGGCGCGCGCGGCGGAGGCGGCGCAGGCGGCGGCGGAGCTGCGGCGCCA
GGTAAAAGCGGAGAAGGATGAGCGCGCCAAGGGCGTCAAGCAGCTGGCGC
AGCTGCAGTCGCAGCTTCAGCGCGAAACACGCGCGCGCGAGGCAGCGGAG
GCAGCGCTCAACGATGTGAAGACGCGCGTGACAGACATGGGCAGGGACTT
GCAGGCAGCAGAACGCATGGTCAAGGCCGCTGACGCGGAGAAAAAGGGGC
TCGAGGCCAAGCTGCAGCGCGCGCAAGACGATGCGCTGCGCGCCAAGTCA
GCGGCGGCGCGCGACCAGACGGTAAAGAGGGAGGAGGACGGCGGCTGGCG
GCAGGAGCAGGCGCGGCTAGAGGGGCAGGTGCGGCGCCTTGAGCGCCAGA
AGGTGGAGCTGATTGGTGCCTTCAGGAAGCAGCTCAAGCTGATAGATGTG
CTGCGACGGCAGCGCGCGCATGTGGAGGCTGCACGCGCTCTCGCCTTCAC
CGAAGAAGAATTTCTGAGGACGCTGGACTGGGCCAAAGACGCGTGAGGGC
TCAATATTATAATCTAAATAACAAGTCTTTTGGCAGC

protein sequence of jgi.p|Trimin1|81161

>Trimin1|81161|CE81160_46 ID=Trimin1|81161|CE81160_46|Name=jgi.p|Trimin1|81161|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=182bp
QARAAEAAQAAAELRRQVKAEKDERAKGVKQLAQLQSQLQRETRAREAAE
AALNDVKTRVTDMGRDLQAAERMVKAADAEKKGLEAKLQRAQDDALRAKS
AAARDQTVKREEDGGWRQEQARLEGQVRRLERQKVELIGAFRKQLKLIDV
LRRQRAHVEAARALAFTEEEFLRTLDWAKDA*

mRNA from alignment at Contig_61:336622..340878+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_8693 ID=mRNA_8693|Name=jgi.p|Trimin1|81161|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4257bp|location=Sequence derived from alignment at Contig_61:336622..340878+ (Tribonema minus UTEX_B_3156 )
CAGGCGCGCGCGGCGGAGGCGGCGCAGGCGGCGGCGGAGCTGCGGCGCCA
GGTAAAAGCGGAGAAGGATGAGCGCGCCAAGGGCGTCAAGCAGCTGGCGC
AGCTGCAGTCGCAGGTACTTGAAGTATATTGCTTGAAGTATGAAAACTGA
AATATGGAAATGGAAGTATTTAGAGACGGAGCAGGAGCTCGGCAAGGCGG
CCAAGCAGCTGACGCAGATGCAGTCGCCGGTATGTGAAGTATTGTGGCTG
AGGTGTGTGGTATTTGAAGTATGGAAACTGAAGTAACGTGAGACGCAGCA
GGAGCAGGGCAAGCGGAAAAGCAGCTGGTGCAGATGCAGATGCAAGTCGC
AGTTGATCTGAAAAACTGTACTCGAAGCATAGTATGAAAGAAGTTGAAGT
GGTCATGGTGAGCACAATGGCAAGGTTACAGGCGACTGCAGAGTCAGAAT
GCAGCGCAGAGTTCGCATGCCAGGGCCACCCAGCCGCTGACGTAAACGCA
GCTGCTTGTGGCCGCAGGTTCATGGCTTCGCATAGTTTGCATAGTTTGTC
CTGATGTCGATAATATGTACTTGCACACCTTGTATCACATACTTCACTAT
ACCATCTGCAAGACCGGCGTGCACATATGGAGGTCGAGTGGCAGCACATG
GGAAGTCAGGTTTGAAGAAGTATATTTGAAGTCAAGAGTGTGGCGTTCGG
CTGTGCGTGCGGGCGACAACTTCAACTTGCAGTGCTCATGTTGTGTGTGT
AGCCAGCACGATGTGTGATCCTCGCTGCGGACGGTGCATTTGTACTTCAG
AGCAGCTGGACTGGCGCTGGCTCTCAATATGTCGCATGGCGGAAACGCAC
CCTCCTTCAGCATTCATACTGTGCGTGAATGAAGCACTTCCACGCTGTGT
GTGCATATATTTGGTAGAGTCTCGGTGTCGCGGGGGGAATAGAGCGGATG
TGCATGGCAGTGTGTCACGTTTCACCACGACAGTGCAAGCTGCCTGCTCC
TGTGGCGGCAACCGCCGACTGACCGCTTGCTTTTGTCAGCCGTTGATGTC
CTCACTGTCATACTTCAACGTTGAAGTTTTCCCGCCACCCAAAAGGTGCC
ACTCTCAACTGCAGCACACTCTCTGGGCCAGCACGGGGAGAATGTGCCTA
GAGCACAAGCCCCAATATTAAACGCAAGGGCTTCAGTTGAAGATATAGCA
TGCCTTGATGTTTACAAGCCCCTGACTCAGCTGTGCCAACGTGTTGACTG
TCCCTGGCAGCTTCAGCGCGAAACACGCGCGCGCGAGGCAGCGGAGGCAG
CGCTCAACGATGTGAAGACGCGCGTGACAGACATGGGCAGGGACTTGCAG
GTATGTGTACGTCGTATTCAGCAGCGTCAGGGCGGACATTTGCAGTTGTA
CTCATTTATCACTTTCTTGCTCACTTGCATATCGTAAGCAATGCTGTTGT
TGCCTTGCGCTGACGTGAACGTGCAACCGGGCCCGAACAAACACAGAAGC
ACAGACATCTGAGATGACTCACCTGTTTCCCTGTGAACGCGCAACGAGTT
GTGGTTCTGGAGGTGCGTTTTGTGCGTCTACAGCTCGTGAAGCAGCTAAG
CAAAAAGTAGAGAAGTGCATCAGGGCTCGTCAGCAGGGACAACTGTCAAG
CGACCAACCTTTAGGCCATGCTTCGCACTGTCAGGATCATGATCATGATC
GTGTTCATGATCGTGTTATGGCTGAGCACTGCTACATATCACGTGCGCCC
GCAGGCAGCAGAACGCATGGTCAAGGCCGCTGACGCGGAGAAAAAGGGGC
TCGAGGTGAGCACTGTGACCTATTACTGAGCGCTGCCCCATGCCTTGTTC
TTGTTGAAAAATGAGTTCAATTAGCGCACTGCGCTCTGGCCTGCTCTGGC
ATACAGGCTGCTGTAGACTCACCCTGATTGAGTTCGAGCCATTTGATGTT
GAGCACTTGATCCAGCGGGCAGGCGGAATGATGTTGGCCATAGAGTCTAC
TGCACGCTATGTTCTGGTCTGCCCTGGCAGGCTGCTGTAGACCTGGTTCA
TTGAACTTCAATCACACTGTATGTTTGGTCGTGAGCGCTGATGACATGGC
GGCACGTCACCGCTCAGACAGGTGTAGTCATTTGTGGCATCCCTGGATCA
TGGGCGACCGTCGTCGAGCTCCTGCGACTTCACAACCTGTGGATCGTCCT
CTCGATATCCAGTGTGCTGGCGGCACAGTGATACATAGTTCCAAACCCTT
ACTTTAACCCCACGCACGTGAATAGACGCAGACCCCAACAATGCGCCCTG
CAGCGCAGTGCAGCAGTTCAACTTGAAGTTCTGTCTCATGCTGTTCTTCA
CGCCTGGCAGCTTGCCGGGATTGCACAGTGATCACCATTGCCCATCATGA
CCTATCAGCGCCACAGCTGACGAACAAGGCCGCTTGTTCTGTACGCGTGG
CTGGCCTGCCGTGATGGCACAGCACATCCATCATTGTAAAGACGCGTCAT
TTGCGGAAGCACTCGTTGACAACACCAAATATGCGTCCCCAACCAGGCCA
AGCTGCAGCGCGCGCAAGACGATGCGCTGCGCGCCAAGTCAGCGGCGGCG
CGCGACCAGACGGTAAAGAGGGAGGAGGACGGCGGCTGGCGGCAGGAGCA
GGCGCGGCTAGAGGGGCAGGTATGTATGCTTTGTTACTGGTAGGGTTGAA
GACGTATTTGGCCATACAAATACAGCGTATGTGGGGCGTGTTTGGCAACC
AGATATACGTTGAGCAAACCTCAACGTGGTAGTATGCTGCACAAAGGGCG
TATTTGTGGGGCATGTGGCGAGTCTGCTCCAGTATGAGCATACAGTCCCA
CCACAAAAGGAGCAACTTGAACTCAGAGAATATGTTTGCATTACTTCAAA
GACGTTGACGCAATGCAGTGCACCTGTACCGTATGCAGAACTTCAAGGCT
GACGTCATGACGCTTTACTGCAATGGTCGGGCAACAACAGCGGGCAACAA
ACATGTAAAAGCCTCAGGCACATTTGCGCCGATGCCTGCAAGATGGCGCT
TGCGTTCGTACATTGCTCTCGCATTAGTGCATGATAACGACGCACTACCA
TAAGTCACTGTGGGTCTACAAGGTGTTGCTACAATGTGCACTGGCCATCA
TGAAGCTGGAGAGTGAACAACTGATCGCTACACTCAACTTCAAGTTGCAG
TGTACGCACCCAGTCAGTGCTGCGGCTGCATTTGGTTTGATGATTTCACC
TGGGCTCAAACTAAATGCACTGCTGCAGTGGGTGCTGCTACGTTCGCAGG
TACTTCATGCCATTGCTGTAGCAGCAGCTGCTGCTGCTGACAGCAGCTGC
TGCAGTCACTGTACGTGGTCGAGGATCAACTAAGTTAGCAGCGCCTGCCT
CAAATCGATGAGTGCACCGCAGGTCACGCCAGCGTTTTGAATTGCGAAAA
ACGGGACCTGATTTCAAAACGGGACCCACAGGGGCGAACTCTGCAAATGG
ACTTCTCTTAATTGTGATGACGTGGGTGTAATAGTCATGCCCGAGAAATA
AATAAATGGAAGGAAGATTTTTTTTTGCGCTCAGGATCTTGAGATATGCC
ATGTTGAACTTGGACTTGAACTTTAACTTCAACTGTGTAGTTTGGCTAAG
TACAGAAGTTCAACTCCGTATTAAAGTTTGAAATGTGCTCAGTGCTCATC
ATGGTATCCCAAACAACTTCAACACTGGTCCCTCCGCCTAATAACTTCAG
CATCATGTTGAAATTCAGCAGCGAACGCTGGCAGGGTTCAACCAGACTTC
GCCAAAGTGGTTTGATGCTGGGTCCCGTTTTCCAACTCAGGTCCCGTTTT
TTTCGCAATTCAATCCTCCAGCAGCAGCGCGCGCAGTCAGCAGCCTCTCA
GCTCATGTGTATCAATCCTTGCCAGCCGCAGTCACCATGCTCCTTCCTTC
ATTTGCGTTCACGTGTCGCAGTGCGCCATAGTGATTGCGGGCCCACAATG
ATTATTCACTTCTTTCCATGCGTCGTGGCATCCCTGCAATGGTCACAGGT
GCGGCGCCTTGAGCGCCAGAAGGTGGAGCTGATTGGTGCCTTCAGGAAGC
AGCTCAAGCTGATAGATGTGCTGCGACGGCAGCGCGCGCATGTGGAGGCT
GCACGCGCTCTCGCCTTCACCGAAGAAGAATTTCTGAGGACGCTGGACTG
GGCCAAAGACGCGTGAGGGCTCAATATTATAATCTAAATAACAAGTCTTT
TGGCAGC

Coding sequence (CDS) from alignment at Contig_61:336622..340878+

>mRNA_8693 ID=mRNA_8693|Name=jgi.p|Trimin1|81161|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=546bp|location=Sequence derived from alignment at Contig_61:336622..340878+ (Tribonema minus UTEX_B_3156 )
CAGGCGCGCGCGGCGGAGGCGGCGCAGGCGGCGGCGGAGCTGCGGCGCCA
GGTAAAAGCGGAGAAGGATGAGCGCGCCAAGGGCGTCAAGCAGCTGGCGC
AGCTGCAGTCGCAGCTTCAGCGCGAAACACGCGCGCGCGAGGCAGCGGAG
GCAGCGCTCAACGATGTGAAGACGCGCGTGACAGACATGGGCAGGGACTT
GCAGGCAGCAGAACGCATGGTCAAGGCCGCTGACGCGGAGAAAAAGGGGC
TCGAGGCCAAGCTGCAGCGCGCGCAAGACGATGCGCTGCGCGCCAAGTCA
GCGGCGGCGCGCGACCAGACGGTAAAGAGGGAGGAGGACGGCGGCTGGCG
GCAGGAGCAGGCGCGGCTAGAGGGGCAGGTGCGGCGCCTTGAGCGCCAGA
AGGTGGAGCTGATTGGTGCCTTCAGGAAGCAGCTCAAGCTGATAGATGTG
CTGCGACGGCAGCGCGCGCATGTGGAGGCTGCACGCGCTCTCGCCTTCAC
CGAAGAAGAATTTCTGAGGACGCTGGACTGGGCCAAAGACGCGTGA