mRNA_85 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|157467
Unique NamemRNA_85
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|157467 vs. uniprot
Match: A0A836CDY1_9STRA (Pept_C1 domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDY1_9STRA)

HSP 1 Score: 526 bits (1355), Expect = 4.240e-189
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1 
Query:    1 MPAAADPAFLLVKPSPEDTRDFKFKAKTTYSNLPTSVDLTLLLPPALDQGELGSCAANAGSVALRYLYKKQIAQDWLPSRLALYYVTRVYMTGDTPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADEVASAPLVEYRAVNRDEFSLKSALAERNMVIVGIAVYESFMTPLVASTGVVPMPKPGELCLGGHACLLTGFTTSTWTLRNSWGMWGKKGNFTLPVAYLTNPHLCFDAWVLSKAIET 765
            MPAAADPAFLLVKPSPEDTRDFKFKAKTTYSNLPTSVDLTLLLPPALDQGELGSCAANAGSVALRYLYKKQIAQDWLPSRLALYYVTRVYMTGDTPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADEVASAPLVEYRAVNRDEFSLKSALAERNMVIVGIAVYESFMTPLVASTGVVPMPKPGELCLGGHACLLTGFTTSTWTLRNSWGMWGKKGNFTLPVAYLTNPHLCFDAWVLSKAIET
Sbjct:    1 MPAAADPAFLLVKPSPEDTRDFKFKAKTTYSNLPTSVDLTLLLPPALDQGELGSCAANAGSVALRYLYKKQIAQDWLPSRLALYYVTRVYMTGDTPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADEVASAPLVEYRAVNRDEFSLKSALAERNMVIVGIAVYESFMTPLVASTGVVPMPKPGELCLGGHACLLTGFTTSTWTLRNSWGMWGKKGNFTLPVAYLTNPHLCFDAWVLSKAIET 255
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BLAST of jgi.p|Trimin1|157467 vs. uniprot
Match: A0A836CN22_9STRA (Pept_C1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN22_9STRA)

HSP 1 Score: 227 bits (578), Expect = 2.110e-70
Identity = 126/244 (51.64%), Postives = 157/244 (64.34%), Query Frame = 1 
Query:   31 LVKPSPEDTRDFKFKAKTTYSNLPTSVDL--TLLLPPALDQGELGSCAANAGSVALRYLYKKQIAQDWLPSRLALYYVTRVYMTGDTPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADEVASAPLVEYRAVNRDEFSLKSALAERNMVIVGIAVYESFMTPLVASTGVVPMPKPGELCLGGHACLLTGFT--TSTWTLRNSWGMWGKKGNFTLPVAYLTNPHLCFDAWVLS 750
            LVK  P+D RDF+F      S++P +VDL  T  +PPA+DQG+ G+C+A+A S ALR+L +K+  QD+ PSRL +Y+ +RVY+ G  P EDTGC LRD+ KA+S Y +  E Y  Y  +K A  PP L            YRAV +   +LKSALA    VIVGI VYESF +  VA TG VPMP  GE CLGGHA L  GF   T T+TL NSWG WG+ G FTLP  YLTNP L FD W+++
Sbjct:   48 LVKQKPDD-RDFQF-VSAAKSSIPAAVDLRTTGFVPPAMDQGQAGTCSAHAASSALRFLIRKEKLQDFQPSRLFIYFTSRVYVEGVAPSEDTGCALRDVVKALSTYHVCNERYMPYSDTKIAEHPPALAVANARLHTTFMYRAVQQSLSALKSALASGYPVIVGIQVYESFESDDVARTGNVPMPSDGEQCLGGHAVLCVGFQDKTQTFTLLNSWGQWGQNGFFTLPYDYLTNPDLAFDFWMIT 289
[Close]
BLAST of jgi.p|Trimin1|157467 vs. uniprot
Match: A0A836CNX1_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNX1_9STRA)

HSP 1 Score: 224 bits (572), Expect = 1.700e-69
Identity = 126/244 (51.64%), Postives = 156/244 (63.93%), Query Frame = 1 
Query:   31 LVKPSPEDTRDFKFKAKTTYSNLPTSVDL--TLLLPPALDQGELGSCAANAGSVALRYLYKKQIAQDWLPSRLALYYVTRVYMTGDTPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADEVASAPLVEYRAVNRDEFSLKSALAERNMVIVGIAVYESFMTPLVASTGVVPMPKPGELCLGGHACLLTGFT--TSTWTLRNSWGMWGKKGNFTLPVAYLTNPHLCFDAWVLS 750
            LVK  P D RD++F A +  S LP +VDL  T  +PP LDQG  G+C+A+A + ALR+L +K+  QD+ PSRL LYYVTRVY+ G +P ED+GC LRD+ KA++ Y +  E Y  YD +K A  PP L            YRAV +   +LK ALA    V+VG  VYESF +  VA TG VPMP  GE CLGGHACLL G+   T T+TL NSWG+WG+ G FTLP AYLT+  L  D W  S
Sbjct:   48 LVKQKP-DNRDYQFVAASRKS-LPAAVDLRTTGCVPPVLDQGSAGTCSAHAAASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMTYDPAKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVLVGFQVYESFESEEVARTGGVPMPAEGEQCLGGHACLLIGYNDATQTFTLLNSWGLWGQNGFFTLPYAYLTDTELACDFWTAS 289
[Close]
BLAST of jgi.p|Trimin1|157467 vs. uniprot
Match: A0A836CEQ3_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEQ3_9STRA)

HSP 1 Score: 209 bits (532), Expect = 6.540e-64
Identity = 122/243 (50.21%), Postives = 152/243 (62.55%), Query Frame = 1 
Query:   31 LVKPSPEDTRDFKFKAKTTYSNLPTSVDL--TLLLPPALDQGELGSCAANAGSVALRYLYKKQIAQDWLPSRLALYYVTRVYMTGDTPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADEVASAPLVEYRAVNRDEFSLKSALAERNMVIVGIAVYESFMTPLVASTGVVPMPKPGELCLGGHACLLTGF--TTSTWTLRNSWGM-WGKKGNFTLPVAYLTNPHLCFDAWV 744
            LVK  P+D RD++F A +  S LP +VDL  T  +PP +DQG  G+C+A+A + ALR+L +K+  QD+ PSRL LYYVTRVY+ G +P ED+GC LRD+ KA++ Y +  E Y  YD +K A  PP L            YRAV +   +LK ALA    V+VGI VY+SF T  VA TGVVPMP  GE CLGGHA  L  F   T T+TL NSW   WG+ G F L   YLTNP L  D W+
Sbjct:   13 LVKQKPDD-RDYQFVAASRKS-LPAAVDLRTTGYVPPVMDQGSAGTCSAHATASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMEYDDTKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVVVGIQVYDSFETEEVARTGVVPMPAEGEQCLGGHAVYLVAFEDATRTFTLCNSWSSAWGQGGFFKLSYDYLTNPDLACDFWM 253
[Close]
BLAST of jgi.p|Trimin1|157467 vs. uniprot
Match: A0A835YYL4_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYL4_9STRA)

HSP 1 Score: 197 bits (502), Expect = 6.010e-59
Identity = 105/235 (44.68%), Postives = 142/235 (60.43%), Query Frame = 1 
Query:   52 DTRDFKFKAKTTYSNLPTSVDL--TLLLPPALDQGELGSCAANAGSVALRYLYKKQIAQDWLPSRLALYYVTRVYMTGDTPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADEVASAPLVEYRAVNRDEFSLKSALAERNMVIVGIAVYESFMTPLVASTGVVPMPKPGELCLGGHACLLTGF--TTSTWTLRNSWG-MWGKKGNFTLPVAYLTNPHLCFDAW 741
            D RD  F +    + LP +VDL  T  +PP LDQG+ G+C+A+A + AL YL +++   D+ P+RL +YY TRVY+ G    +D+GC LRD+CKA+ +Y +P E Y  Y   K +  P  +          + Y AV + E +LK ALA R  V++GI V+ESF +  VA TGVVPMP+ GE CLGGHA  + G+   T T+TL NSW   WG  G FTLP  Y+ +P L  D W
Sbjct:   52 DRRDIVFSSNVKVATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVADFSPARLYIYYTTRVYVEGTPAFDDSGCVLRDVCKAIKKYHVPDERYEPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDKVAQTGVVPMPQEGEQCLGGHAVDVVGYDDVTRTFTLMNSWSTQWGDSGFFTLPYEYVLDPSLASDFW 286
[Close]
BLAST of jgi.p|Trimin1|157467 vs. uniprot
Match: A0A835Z842_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z842_9STRA)

HSP 1 Score: 194 bits (494), Expect = 7.600e-58
Identity = 103/235 (43.83%), Postives = 142/235 (60.43%), Query Frame = 1 
Query:   52 DTRDFKFKAKTTYSNLPTSVDL--TLLLPPALDQGELGSCAANAGSVALRYLYKKQIAQDWLPSRLALYYVTRVYMTGDTPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADEVASAPLVEYRAVNRDEFSLKSALAERNMVIVGIAVYESFMTPLVASTGVVPMPKPGELCLGGHACLLTGF--TTSTWTLRNSWG-MWGKKGNFTLPVAYLTNPHLCFDAW 741
            D RD  F +    + LP +VDL  T  +PP LDQG+ G+C+A+A + AL YL +++   D+ P+RL +YY TRVY+ G    +D+GC LRD+CKA+ +Y +P E +  Y   K +  P  +          + Y AV + E +LK ALA R  V++GI V+ESF +  VA TGVVPMP+ GE CLGGHA  + G+   T T+TL NSW   WG  G FTLP  Y+ + +L  D W
Sbjct:   44 DRRDIVFSSNVKVATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVADFSPARLYIYYTTRVYVEGIPASDDSGCVLRDVCKAIKKYHVPDERFEPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDAVAQTGVVPMPQEGEQCLGGHAVDVVGYDDATRTFTLMNSWSTQWGDSGFFTLPYEYVLDSNLASDFW 278
[Close]
BLAST of jgi.p|Trimin1|157467 vs. uniprot
Match: A0A836CMZ0_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMZ0_9STRA)

HSP 1 Score: 194 bits (493), Expect = 1.350e-57
Identity = 108/239 (45.19%), Postives = 146/239 (61.09%), Query Frame = 1 
Query:   49 EDTRDFKFKAKTTYSNLPTSVDL--TLLLPPALDQGELGSCAANAGSVALRYLYKKQIAQDWLPSRLALYYVTRVYMTGDTPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADEVASAPLVEYRAVNRDEFSLKSALAERNMVIVGIAVYESFMTPLVASTGVVPMPKPGELCLGGHACLLTGFT--TSTWTLRNSWGMWGKKGNFTLPVAYLTNPHLCFDAWVLSK 753
            ED+RD+ F A    S +P  VDL  T  L P L+QG  G+C+A+A + ALRYL +K+  QD+ PSRL +YY TRV + G +P+ D+GC LRD+C+A+ ++    E Y  Y  ++    PP L            YRAV +   +L+ ALA    VIVGI VY++F +  VA+TGVVPMP   E CLGGHA LL  +   T T+TL+NSWG WG+ G F+LP  YL +  L  D W L++
Sbjct:   53 EDSRDYSFVASFRNS-IPQKVDLRSTGFLGPVLNQGSAGTCSAHAAAAALRYLLRKEHVQDFPPSRLFVYYTTRVNIEGISPEIDSGCVLRDVCRALQKFHTCNERYMAYSDTQITERPPALAVANARLHTTFAYRAVEQTLSALRGALATGYPVIVGIQVYQTFESEEVANTGVVPMPSHNEECLGGHAVLLVAYDDETRTFTLQNSWGEWGQDGFFSLPYDYLIDTGLAGDFWCLTR 290
[Close]
BLAST of jgi.p|Trimin1|157467 vs. uniprot
Match: A0A835ZGP7_9STRA (Pept_C1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGP7_9STRA)

HSP 1 Score: 166 bits (421), Expect = 7.680e-48
Identity = 91/202 (45.05%), Postives = 117/202 (57.92%), Query Frame = 1 
Query:  145 QGELGSCAANAGSVALRYLYKKQIAQDWLPSRLALYYVTRVYMTGDTPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADEVASAPLVEYRAVNRDEFSLKSALAERNMVIVGIAVYESFMTPLVASTGVVPMPKPGELCLGGHACLLTGFTTST--WTLRNSWGM-WGKKGNFTLPVAYLTNPHLCFDAW 741
            QG  G+C+A+A +  L YL +K+   D+ PSRL +YY  RVY+ G    ED+GC LRD+CKA++RY  P E Y  Y  ++ A  P  L          ++YRAV + E  LK ALA    V+VGI VY  F +  VA TG   +P P E CLGGHA +LT +  S   +TL NSW   WG+ G FTLP  YL +P L  D W
Sbjct:    1 QGRAGTCSAHAAANCLHYLLRKEGVADFPPSRLFIYYTARVYVEGTPATEDSGCVLRDVCKAVARYHAPDEKYEPYSDARIAQRPSALAVANARKHCALQYRAVPQTEADLKGALAAGYPVMVGIQVYAGFESDEVARTGEAQLPGPDEACLGGHAVVLTAYDDSLRRFTLMNSWSSAWGRGGFFTLPYDYLLDPQLAGDFW 202
[Close]
BLAST of jgi.p|Trimin1|157467 vs. uniprot
Match: A0A538AF61_9ACTN (Peptidase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538AF61_9ACTN)

HSP 1 Score: 164 bits (416), Expect = 1.960e-46
Identity = 94/226 (41.59%), Postives = 126/226 (55.75%), Query Frame = 1 
Query:   79 KTTYSNLPTSVDLTLLLPPALDQGELGSCAANAGSVALRYLYKKQIAQDWLPSRLALYYVTRVYMTGDTPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADEVASAPLVEYRAVNRDEFSLKSALAERNMVIVGIAVYESFMTPLVASTGVVPMPKPGELCLGGHACLLTGFTTST--WTLRNSWGM-WGKKGNFTLPVAYLTNPHLCFDAWVL 747
            +   + LP   DL   +PP  DQG+LGSC ANA   A  +   K+  +D+ PSRL +YY  R  M G T D D+G  +RD  K++++  + PE  W YDI KF   PP    DE +    V YR V      ++  LA     ++G +VYESFM+P VA TG VP+P  GE  +GGHA +  G+  S   + +RNSWG  WG KG  T+P  YLT+P L  D W +
Sbjct:    6 EAVLTKLPKKTDLRSKMPPVYDQGQLGSCTANAIGGAYEFDQIKEGLKDFTPSRLFIYYNERA-MEG-TVDTDSGAMIRDGMKSVAKVGVCPETTWPYDIPKFTEKPPKTAYDEASKHQAVVYRRVLGTLHQMQGCLASGYPFVLGFSVYESFMSPEVAKTGEVPLPPRGEQLIGGHAVVAVGYDDSIQRFIVRNSWGTGWGMKGYCTMPYGYLTDPQLARDFWAI 229
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BLAST of jgi.p|Trimin1|157467 vs. uniprot
Match: A0A1C3F9C6_9FIRM (Cysteine protease n=1 Tax=Desulfosporosinus sp. BG TaxID=1633135 RepID=A0A1C3F9C6_9FIRM)

HSP 1 Score: 164 bits (415), Expect = 2.030e-46
Identity = 105/233 (45.06%), Postives = 135/233 (57.94%), Query Frame = 1 
Query:   34 VKPSPEDTRDFKFKAK--TTYSNLPTSVDLTLLLPPALDQGELGSCAANAGSVALRYLYKKQIAQDWLPSRLALYYVTRVYMTGDTPDEDTGCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADEVASAPLVEYRAVNRDEFSLKSALAERNMVIVGIAVYESFMTPLVASTGVVPMPKPGELCLGGHACLLTGF-----TTSTWTLRNSWGM-WGKKGNFTLPVAY 708
            +KP  ED RD  F++   TT + LP SVDL     P +DQGELGSC ANA +  LR  ++KQ     L SRL LY+  R  + G T +ED+G  +RD  K + +    PE+ W YDI+KF L PP     +     + EY  V     +LK+ALAE   V++GI+VYESF +  VA TG++P+PK GE  LGGHA L  G+     TT     RNSWG  WG KG F LP +Y
Sbjct:    8 LKPDTEDLRDKVFRSTRFTTKTVLPKSVDLRFGCSPIVDQGELGSCTANAIASGLREYWEKQAGSLTLLSRLWLYWEER-NLEG-TVNEDSGAMIRDGMKVLQQMGCAPEVDWPYDITKFTLTPPPQATMDAVPFKISEYHRV-LSLTTLKAALAEGYPVVLGISVYESFESEQVAQTGIIPLPKRGEKLLGGHAVLAVGYIDSGKTTGYVACRNSWGEGWGDKGYFYLPYSY 237
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157467 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CDY1_9STRA4.240e-189100.00Pept_C1 domain-containing protein n=2 Tax=Tribonem... [more]
A0A836CN22_9STRA2.110e-7051.64Pept_C1 domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CNX1_9STRA1.700e-6951.64Papain cysteine protease family protein n=1 Tax=Tr... [more]
A0A836CEQ3_9STRA6.540e-6450.21Papain cysteine protease family protein n=1 Tax=Tr... [more]
A0A835YYL4_9STRA6.010e-5944.68Papain cysteine protease family protein n=1 Tax=Tr... [more]
A0A835Z842_9STRA7.600e-5843.83Papain cysteine protease family protein n=1 Tax=Tr... [more]
A0A836CMZ0_9STRA1.350e-5745.19Papain cysteine protease family protein n=1 Tax=Tr... [more]
A0A835ZGP7_9STRA7.680e-4845.05Pept_C1 domain-containing protein n=1 Tax=Tribonem... [more]
A0A538AF61_9ACTN1.960e-4641.59Peptidase n=1 Tax=Actinomycetia bacterium TaxID=18... [more]
A0A1C3F9C6_9FIRM2.030e-4645.06Cysteine protease n=1 Tax=Desulfosporosinus sp. BG... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:459617..460384 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|157467|e_gw1.3.253.1
DescriptionPFAM Papain family cysteine protease
COG categoryO
Max annot lvl1297|Deinococcus-Thermus
EggNOG OGsCOG4870@1|root,COG4870@2|Bacteria,1WM2I@1297|Deinococcus-Thermus
Evalue3.4e-47
Seed ortholog937777.Deipe_1519
Hectar predicted targeting categoryother localisation
TranscriptId157789
TrackFilteredModels1
ProteinId157467
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157467gene_85Tribonema minus UTEX_B_3156 geneContig_3 459617..460384 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_85_1exon_85_1Tribonema minus UTEX_B_3156 exonContig_3 459617..460384 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_85CDS_85Tribonema minus UTEX_B_3156 CDSContig_3 459617..460384 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157467Trimin1|157467|e_gw1.3.253.1Tribonema minus UTEX_B_3156 polypeptideContig_3 459617..460384 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_85 ID=mRNA_85|Name=jgi.p|Trimin1|157467|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=768bp|location=Sequence derived from alignment at Contig_3:459617..460384+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCGCGGCTGCGGATCCTGCTTTCCTGTTGGTGAAGCCGTCGCCCGA
AGACACTCGCGACTTCAAGTTCAAGGCGAAGACGACATATAGCAATCTAC
CCACCTCTGTCGATCTAACCCTGCTTCTGCCCCCTGCGCTAGATCAAGGC
GAGTTGGGCAGCTGCGCGGCGAATGCGGGCAGCGTGGCTCTGCGTTATCT
TTACAAGAAGCAGATCGCACAAGATTGGCTGCCTTCTCGCCTGGCACTGT
ATTATGTGACACGCGTGTACATGACTGGAGATACTCCCGATGAGGACACC
GGTTGCTACCTCCGCGATTTGTGTAAGGCCATGAGTCGGTATCAGCTCCC
GCCTGAGATATATTGGCGATACGACATAAGCAAGTTCGCATTGCCCCCGC
CCTTTCTTCAAGCCGACGAAGTGGCGTCCGCACCACTGGTTGAGTACAGA
GCTGTCAACCGTGACGAGTTCTCGCTCAAGAGCGCTCTGGCTGAGAGAAA
CATGGTTATCGTGGGTATTGCAGTGTACGAATCGTTCATGACCCCGCTGG
TTGCAAGCACGGGCGTCGTGCCGATGCCCAAACCGGGGGAGCTGTGTCTG
GGGGGGCACGCTTGTTTACTGACTGGGTTCACTACGTCAACTTGGACGCT
GCGCAACAGCTGGGGTATGTGGGGTAAGAAAGGCAACTTTACATTGCCTG
TTGCATATCTGACTAACCCACACTTGTGCTTTGACGCTTGGGTGCTCAGC
AAGGCGATCGAAACTTGA
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protein sequence of jgi.p|Trimin1|157467

>Trimin1|157467|e_gw1.3.253.1 ID=Trimin1|157467|e_gw1.3.253.1|Name=jgi.p|Trimin1|157467|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=256bp
MPAAADPAFLLVKPSPEDTRDFKFKAKTTYSNLPTSVDLTLLLPPALDQG
ELGSCAANAGSVALRYLYKKQIAQDWLPSRLALYYVTRVYMTGDTPDEDT
GCYLRDLCKAMSRYQLPPEIYWRYDISKFALPPPFLQADEVASAPLVEYR
AVNRDEFSLKSALAERNMVIVGIAVYESFMTPLVASTGVVPMPKPGELCL
GGHACLLTGFTTSTWTLRNSWGMWGKKGNFTLPVAYLTNPHLCFDAWVLS
KAIET*
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mRNA from alignment at Contig_3:459617..460384+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_85 ID=mRNA_85|Name=jgi.p|Trimin1|157467|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=768bp|location=Sequence derived from alignment at Contig_3:459617..460384+ (Tribonema minus UTEX_B_3156 )
ATGCCCGCGGCTGCGGATCCTGCTTTCCTGTTGGTGAAGCCGTCGCCCGA
AGACACTCGCGACTTCAAGTTCAAGGCGAAGACGACATATAGCAATCTAC
CCACCTCTGTCGATCTAACCCTGCTTCTGCCCCCTGCGCTAGATCAAGGC
GAGTTGGGCAGCTGCGCGGCGAATGCGGGCAGCGTGGCTCTGCGTTATCT
TTACAAGAAGCAGATCGCACAAGATTGGCTGCCTTCTCGCCTGGCACTGT
ATTATGTGACACGCGTGTACATGACTGGAGATACTCCCGATGAGGACACC
GGTTGCTACCTCCGCGATTTGTGTAAGGCCATGAGTCGGTATCAGCTCCC
GCCTGAGATATATTGGCGATACGACATAAGCAAGTTCGCATTGCCCCCGC
CCTTTCTTCAAGCCGACGAAGTGGCGTCCGCACCACTGGTTGAGTACAGA
GCTGTCAACCGTGACGAGTTCTCGCTCAAGAGCGCTCTGGCTGAGAGAAA
CATGGTTATCGTGGGTATTGCAGTGTACGAATCGTTCATGACCCCGCTGG
TTGCAAGCACGGGCGTCGTGCCGATGCCCAAACCGGGGGAGCTGTGTCTG
GGGGGGCACGCTTGTTTACTGACTGGGTTCACTACGTCAACTTGGACGCT
GCGCAACAGCTGGGGTATGTGGGGTAAGAAAGGCAACTTTACATTGCCTG
TTGCATATCTGACTAACCCACACTTGTGCTTTGACGCTTGGGTGCTCAGC
AAGGCGATCGAAACTTGA
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Coding sequence (CDS) from alignment at Contig_3:459617..460384+

>mRNA_85 ID=mRNA_85|Name=jgi.p|Trimin1|157467|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=768bp|location=Sequence derived from alignment at Contig_3:459617..460384+ (Tribonema minus UTEX_B_3156 )
ATGCCCGCGGCTGCGGATCCTGCTTTCCTGTTGGTGAAGCCGTCGCCCGA
AGACACTCGCGACTTCAAGTTCAAGGCGAAGACGACATATAGCAATCTAC
CCACCTCTGTCGATCTAACCCTGCTTCTGCCCCCTGCGCTAGATCAAGGC
GAGTTGGGCAGCTGCGCGGCGAATGCGGGCAGCGTGGCTCTGCGTTATCT
TTACAAGAAGCAGATCGCACAAGATTGGCTGCCTTCTCGCCTGGCACTGT
ATTATGTGACACGCGTGTACATGACTGGAGATACTCCCGATGAGGACACC
GGTTGCTACCTCCGCGATTTGTGTAAGGCCATGAGTCGGTATCAGCTCCC
GCCTGAGATATATTGGCGATACGACATAAGCAAGTTCGCATTGCCCCCGC
CCTTTCTTCAAGCCGACGAAGTGGCGTCCGCACCACTGGTTGAGTACAGA
GCTGTCAACCGTGACGAGTTCTCGCTCAAGAGCGCTCTGGCTGAGAGAAA
CATGGTTATCGTGGGTATTGCAGTGTACGAATCGTTCATGACCCCGCTGG
TTGCAAGCACGGGCGTCGTGCCGATGCCCAAACCGGGGGAGCTGTGTCTG
GGGGGGCACGCTTGTTTACTGACTGGGTTCACTACGTCAACTTGGACGCT
GCGCAACAGCTGGGGTATGTGGGGTAAGAAAGGCAACTTTACATTGCCTG
TTGCATATCTGACTAACCCACACTTGTGCTTTGACGCTTGGGTGCTCAGC
AAGGCGATCGAAACTTGA
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