mRNA_8265 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: A0A835YVE1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE1_9STRA) HSP 1 Score: 269 bits (688), Expect = 1.540e-80 Identity = 439/439 (100.00%), Postives = 439/439 (100.00%), Query Frame = 1 Query: 1 MMGSAEQLNAPWSGALXXXXXXXXXXXXXXADTASLXXXXXXXXXXXXXXXXXXXXXXXXXXDKLSAAAGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKEEHAAPSVSTASAQQLRAPWSSSNAQLFAPWAAXXXXXXXXXXXXLNAPWRGGLSAPWSAPGEXXXXXXXXSAAAALSTXXXXXXXXXXXXXADAQQQXXXXXXXXXXXXXXXXXXXASEQQLVSPWSXXXLSAPWRSSSDAQLSAPWSSSDQXXXXXXXXXXXXXXXSSSNAXXXXXXXXXXXXXXXXXSSDAQXXXXXTSSSSXXXXXXXXXXXXXXXXXXXXSSSSSAQLXXXXXSSAPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLSVGSIAHPLLLRFAALALGLVLARRAAAASKRRH 1317 MMGSAEQLNAPWSGALXXXXXXXXXXXXXXADTASLXXXXXXXXXXXXXXXXXXXXXXXXXXDKLSAAAGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKEEHAAPSVSTASAQQLRAPWSSSNAQLFAPWAAXXXXXXXXXXXXLNAPWRGGLSAPWSAPGEXXXXXXXXSAAAALSTXXXXXXXXXXXXXADAQQQXXXXXXXXXXXXXXXXXXXASEQQLVSPWSXXXLSAPWRSSSDAQLSAPWSSSDQXXXXXXXXXXXXXXXSSSNAXXXXXXXXXXXXXXXXXSSDAQXXXXXTSSSSXXXXXXXXXXXXXXXXXXXXSSSSSAQLXXXXXSSAPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLSVGSIAHPLLLRFAALALGLVLARRAAAASKRRH Sbjct: 1 MMGSAEQLNAPWSGALXXXXXXXXXXXXXXADTASLXXXXXXXXXXXXXXXXXXXXXXXXXXDKLSAAAGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKEEHAAPSVSTASAQQLRAPWSSSNAQLFAPWAAXXXXXXXXXXXXLNAPWRGGLSAPWSAPGEXXXXXXXXSAAAALSTXXXXXXXXXXXXXADAQQQXXXXXXXXXXXXXXXXXXXASEQQLVSPWSXXXLSAPWRSSSDAQLSAPWSSSDQXXXXXXXXXXXXXXXSSSNAXXXXXXXXXXXXXXXXXSSDAQXXXXXTSSSSXXXXXXXXXXXXXXXXXXXXSSSSSAQLXXXXXSSAPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLSVGSIAHPLLLRFAALALGLVLARRAAAASKRRH 439
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: A0A836CDQ2_9STRA (E2F/DP family winged-helix DNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDQ2_9STRA) HSP 1 Score: 542 bits (1397), Expect = 1.110e-190 Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 3 Query: 48 MRERPLPFDVDSEARMAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKPRRARAAAKRCGKGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPECINDNAPLFAAAQQAQPXXXXXXXXXXXXXXXXGAMPSLERQIQI 1178 MRERPLPFDVDSEARMAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKPRRARAAAKRCGKGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPECINDNAPLFAAAQQAQPXXXXXXXXXXXXXXXXGAMPSLERQIQI Sbjct: 1 MRERPLPFDVDSEARMAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKPRRARAAAKRCGKGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPECINDNAPLFAAAQQAQPXXXXXXXXXXXXXXXXGAMPSLERQIQI 377
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: A0A8K1CI48_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CI48_PYTOL) HSP 1 Score: 155 bits (392), Expect = 1.190e-39 Identity = 96/264 (36.36%), Postives = 142/264 (53.79%), Query Frame = 3 Query: 255 KGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPEC 1046 KGLRHFS KV ++V+ + TTY EVA+ LV+EF + P +S Y+EKNIRRRVYDALNVL+A++II++ERK IRW G+PT+ A L E E+ V++KR+ L + + +A++ ++ N+ DE ++ LPFI V T++DTV++CEM E +Q++ F FS F ++ + L+RL LH+CP +L Q+VPD L ++P EC Sbjct: 161 KGLRHFSMKVCEKVEEKNVTTYNEVADELVREFVTLR------------------------PNDSGYDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPTNLQHDAEMLIAE------------------RNERMKSVEQKRQHLQDLLVQQVAMKNL---LKRNTKRRKENGTDTLR------DEGRIFLPFIVVNTNKDTVIQCEMSEDRQDIFFNFSNPFEINDDTEILRRLDLHKCPYGELKQIVPDKLMSYLPAEC 373
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: K3WUL3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUL3_GLOUD) HSP 1 Score: 155 bits (392), Expect = 2.480e-39 Identity = 95/264 (35.98%), Postives = 143/264 (54.17%), Query Frame = 3 Query: 255 KGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPEC 1046 KGLRHFS KV +V+ + T+Y EVA+ LV+EF + P ++VY+EKNIRRRVYDALNVL+A++II++ERK IRW G+P++ L E E+R +++K++ L + + +A++ ++ N+A +G DE ++ LPFI V T +DTV++CEM E +Q++ F FS F ++ + L+RL LHQC S+L QLVP+ L +P EC Sbjct: 191 KGLRHFSMKVCQKVEEKHVTSYNEVADELVREFVTMR------------------------PNDAVYDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPSNLQHDTEMLIAE------------------RNERRKSLEQKKQHLQDLLVQQVAMKNL---LKRNAARRKAETELSVASESGHGDEGRIFLPFIVVNTAKDTVIQCEMSEDRQDIFFNFSAPFEINDDTEILRRLNLHQCAFSELKQLVPEKLLSCLPAEC 409
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: A0A0M0JTX1_9EUKA (Transcription factor dp-1 (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JTX1_9EUKA) HSP 1 Score: 151 bits (381), Expect = 4.060e-38 Identity = 102/291 (35.05%), Postives = 151/291 (51.89%), Query Frame = 3 Query: 213 SKPRRARAA--AKRCGKGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPECINDNAPLFAAA 1079 SK +R + A K+ KGLRHFS KV ++V+ +G TTY EVA+ LV EF A + A+ +P++ Y+EKNIRRRVYDALNVL+A+ II +E+K+I W G+P++ Q ARL+ +L + ++RKR L + V I+ ++ AN A ++Q+ LPFI V T ++TVV CEM E +QE+ F FS F + + TL+R+ + +C QL LVP +L ++ + + P AAA Sbjct: 124 SKKKRVQRAHGGKQGDKGLRHFSMKVCEKVEQKGRTTYNEVADELVMEF-------------------ANMAAEGTSPLDQAYDEKNIRRRVYDALNVLMAMEIIYKEKKSILWRGLPSNTEQEHARLQMDLN------------------SRGERMERKRLHLQDLVQQQISFKQLIARNRANEAAGRPLPPA----------DSQIALPFIVVNTKKETVVDCEMAEDKQEIFFNFSAPFEIHDDSETLKRMHMQRCASDQLTALVPPNLVQFARDSSLVTDPPAAAAA 367
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: A0A3F2S1S5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1S5_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.720e-37 Identity = 91/264 (34.47%), Postives = 137/264 (51.89%), Query Frame = 3 Query: 255 KGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPEC 1046 KGLRHFS KV +V+ + T+Y EVA+ LV+EF + P ++VY+EKNIRRRVYDALNVL+A++II++ERK IRW G+P++ L E E+ V++K++ L + + +A++ + +A DE ++ LPFI V T +DTV++CEM E +Q++ F FS F + + LQRL LH+ ++L Q+VPD L ++P EC Sbjct: 19 KGLRHFSMKVCQKVEEKHVTSYNEVADELVREFVTMR------------------------PNDAVYDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPSNLQHDTEMLLAE------------------RNERMKSVEQKKQHLQDLLVQQVAMKN----LLKRNAERKRLESENPVSAIAARDEGRVFLPFIAVNTSKDTVIQCEMSEDRQDIFFNFSAPFEIHDDADILQRLNLHKARFAELKQMVPDKLLSYLPAEC 236
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: A0A2D4C957_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C957_PYTIN) HSP 1 Score: 149 bits (376), Expect = 4.260e-37 Identity = 94/264 (35.61%), Postives = 139/264 (52.65%), Query Frame = 3 Query: 255 KGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPEC 1046 KGLRHFS +V +V+ + TTY EVA+ LV+EF + P ++ Y+EKNIRRRVYDALNVL+AL+II++ERK IRW G+PT+ A L E E+ V++K++ L + + +A++ ++ N+ DE ++ LPFI V T +DTV++CEM E +Q++ F FS F ++ + L+RL LH+CPR +L +VP+ L VP EC Sbjct: 191 KGLRHFSLRVCQKVEEKNVTTYNEVADELVREFVTMR------------------------PNDTAYDEKNIRRRVYDALNVLMALDIISKERKEIRWRGLPTNLQHDAEMLIAE------------------RNERVKSVEQKKQHLQDLLVQQVAMKNL---LKRNAKRRKESTLDALR------DEGRIFLPFIVVNTSKDTVIQCEMSEDRQDIFFNFSNPFEINDDTEILRRLDLHKCPREELRHIVPEKLLSHVPTEC 403
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: G4ZDE1_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZDE1_PHYSP) HSP 1 Score: 146 bits (368), Expect = 4.230e-36 Identity = 92/264 (34.85%), Postives = 139/264 (52.65%), Query Frame = 3 Query: 255 KGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPEC 1046 KGLRHFS KV +V+ + T+Y EVA+ LV+EF + P ++VY+EKNIRRRVYDALNVL+A++II++ERK IRW G+P++ L E E+ V++K++ L + + +A++ ++ N+ T DE ++ LPFI V T +DTV++CEM E +Q++ F FS F + + LQ+L LH+ P + L Q+VPD L ++P EC Sbjct: 170 KGLRHFSMKVCQKVEEKHVTSYNEVADELVREFVTMR------------------------PNDAVYDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPSNMQHDTEMLLAE------------------RNERMKSVEQKKQHLQDLLVQQVAMKNL---LKRNAERKRKESENPTAATIVR-DEGRVFLPFIAVNTSKDTVIQCEMSEDRQDIFFNFSAPFEIHDDADILQKLNLHKAPYNDLKQMVPDRLLSYLPAEC 387
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: A0A0W8CPQ7_PHYNI (Transcription factor Dp-1 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CPQ7_PHYNI) HSP 1 Score: 143 bits (360), Expect = 9.990e-36 Identity = 91/264 (34.47%), Postives = 139/264 (52.65%), Query Frame = 3 Query: 255 KGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPEC 1046 KGLRHFS KV +V+ + T+Y EVA+ LV+EF + P ++VY+EKNIRRRV DALNVL+A++II++ERK IRW G+P++ L E E+ V++K++ L + + +A++ ++ N+ T DE ++ LPFI V T +DTV++CEM E +Q++ F FS F + + LQ+L LH+ P ++L Q+VPD L ++P EC Sbjct: 87 KGLRHFSMKVCQKVEEKHVTSYNEVADELVREFVTMR------------------------PNDAVYDEKNIRRRVXDALNVLMAMDIISKERKEIRWKGLPSNLQHDTEMLLAE------------------RNERMKSVEQKKQHLQDLLVQQVAMKNL---LKRNADRKRKESENPTSATIVR-DEGRVFLPFIAVNTSKDTVIQCEMSEDRQDIFFNFSAPFEIHDDADILQKLNLHKAPYAELKQMVPDKLLSYLPAEC 304
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: D0P1H1_PHYIT (Transcription factor Dp-1 n=29 Tax=Phytophthora TaxID=4783 RepID=D0P1H1_PHYIT) HSP 1 Score: 145 bits (365), Expect = 1.180e-35 Identity = 92/264 (34.85%), Postives = 140/264 (53.03%), Query Frame = 3 Query: 255 KGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPEC 1046 KGLRHFS KV +V+ + T+Y EVA+ LV+EF + P ++VY+EKNIRRRVYDALNVL A++II++ERK IRW G+P++ + L E E+ V++K++ L + + +A++ ++ N+ T DE ++ LPFI V T +DTV++CEM E +Q++ F FS F + + LQ+L LH+ P ++L Q+VPD L ++P EC Sbjct: 172 KGLRHFSMKVCQKVEEKHVTSYNEVADDLVREFVTMR------------------------PNDAVYDEKNIRRRVYDALNVLRAMDIISKERKEIRWKGLPSNLQHDSEMLLTE------------------RNERMKSVEQKKQHLQDLLVQQVAMKNL---LKRNAERKRKESENPTAATIVR-DEGRVFLPFIAVNTSKDTVIQCEMSEDRQDIFFNFSAPFEIHDDADILQKLNLHRAPYTELKQMVPDKLLSYLPAEC 389
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: H3HCT7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCT7_PHYRM) HSP 1 Score: 144 bits (364), Expect = 1.430e-35 Identity = 92/264 (34.85%), Postives = 137/264 (51.89%), Query Frame = 3 Query: 255 KGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPEC 1046 KGLRHFS KV +V+ + T+Y EVA+ LV+EF + P +SVY+EKNIRRRVYDALNVL+A++II++ERK IRW G+P++ L E E+ V++K++ L + + +A++ ++ N+ T DE ++ LPFI V T +DTV++CEM E + ++ F FS F + + LQ+L LH+ P +L Q+VPD L +P EC Sbjct: 165 KGLRHFSMKVCQKVEEKHVTSYNEVADELVREFVTMR------------------------PNDSVYDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPSNLQHDTEMLLAE------------------RNERMRSVEQKKQHLQDLLVQQVAMKNL---LKRNAERKRKESEKPGSATVTR-DEGRVFLPFIAVNTSKDTVIQCEMSEDRHDIFFNFSAPFEIHDDADILQKLNLHKAPYGELKQMVPDKLLSHLPAEC 382 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8265 ID=mRNA_8265|Name=jgi.p|Trimin1|349005|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1774bp|location=Sequence derived from alignment at Contig_34:280559..282580+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGATGGGCTCAGCAGAGCAGCTCAACGCGCCATGGAGCGGAGCGCTGTCback to top protein sequence of jgi.p|Trimin1|349005 >Trimin1|349005|estExt_Genemark1.C_Ctg_340032 ID=Trimin1|349005|estExt_Genemark1.C_Ctg_340032|Name=jgi.p|Trimin1|349005|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=440bp MMGSAEQLNAPWSGALSAPWSAALSSPWSAADTASLSAPWSAEQLHAPWSback to top mRNA from alignment at Contig_34:280559..282580+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8265 ID=mRNA_8265|Name=jgi.p|Trimin1|349005|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2022bp|location=Sequence derived from alignment at Contig_34:280559..282580+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_34:280559..282580+ >mRNA_8265 ID=mRNA_8265|Name=jgi.p|Trimin1|349005|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1320bp|location=Sequence derived from alignment at Contig_34:280559..282580+ (Tribonema minus UTEX_B_3156 )back to top |