mRNA_8265 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349005
Unique NamemRNA_8265
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: A0A835YVE1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE1_9STRA)

HSP 1 Score: 269 bits (688), Expect = 1.540e-80
Identity = 439/439 (100.00%), Postives = 439/439 (100.00%), Query Frame = 1
Query:    1 MMGSAEQLNAPWSGALXXXXXXXXXXXXXXADTASLXXXXXXXXXXXXXXXXXXXXXXXXXXDKLSAAAGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKEEHAAPSVSTASAQQLRAPWSSSNAQLFAPWAAXXXXXXXXXXXXLNAPWRGGLSAPWSAPGEXXXXXXXXSAAAALSTXXXXXXXXXXXXXADAQQQXXXXXXXXXXXXXXXXXXXASEQQLVSPWSXXXLSAPWRSSSDAQLSAPWSSSDQXXXXXXXXXXXXXXXSSSNAXXXXXXXXXXXXXXXXXSSDAQXXXXXTSSSSXXXXXXXXXXXXXXXXXXXXSSSSSAQLXXXXXSSAPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLSVGSIAHPLLLRFAALALGLVLARRAAAASKRRH 1317
            MMGSAEQLNAPWSGALXXXXXXXXXXXXXXADTASLXXXXXXXXXXXXXXXXXXXXXXXXXXDKLSAAAGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKEEHAAPSVSTASAQQLRAPWSSSNAQLFAPWAAXXXXXXXXXXXXLNAPWRGGLSAPWSAPGEXXXXXXXXSAAAALSTXXXXXXXXXXXXXADAQQQXXXXXXXXXXXXXXXXXXXASEQQLVSPWSXXXLSAPWRSSSDAQLSAPWSSSDQXXXXXXXXXXXXXXXSSSNAXXXXXXXXXXXXXXXXXSSDAQXXXXXTSSSSXXXXXXXXXXXXXXXXXXXXSSSSSAQLXXXXXSSAPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLSVGSIAHPLLLRFAALALGLVLARRAAAASKRRH
Sbjct:    1 MMGSAEQLNAPWSGALXXXXXXXXXXXXXXADTASLXXXXXXXXXXXXXXXXXXXXXXXXXXDKLSAAAGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKEEHAAPSVSTASAQQLRAPWSSSNAQLFAPWAAXXXXXXXXXXXXLNAPWRGGLSAPWSAPGEXXXXXXXXSAAAALSTXXXXXXXXXXXXXADAQQQXXXXXXXXXXXXXXXXXXXASEQQLVSPWSXXXLSAPWRSSSDAQLSAPWSSSDQXXXXXXXXXXXXXXXSSSNAXXXXXXXXXXXXXXXXXSSDAQXXXXXTSSSSXXXXXXXXXXXXXXXXXXXXSSSSSAQLXXXXXSSAPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLSVGSIAHPLLLRFAALALGLVLARRAAAASKRRH 439          
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: A0A836CDQ2_9STRA (E2F/DP family winged-helix DNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDQ2_9STRA)

HSP 1 Score: 542 bits (1397), Expect = 1.110e-190
Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 3
Query:   48 MRERPLPFDVDSEARMAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKPRRARAAAKRCGKGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPECINDNAPLFAAAQQAQPXXXXXXXXXXXXXXXXGAMPSLERQIQI 1178
            MRERPLPFDVDSEARMAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKPRRARAAAKRCGKGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPECINDNAPLFAAAQQAQPXXXXXXXXXXXXXXXXGAMPSLERQIQI
Sbjct:    1 MRERPLPFDVDSEARMAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKPRRARAAAKRCGKGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPECINDNAPLFAAAQQAQPXXXXXXXXXXXXXXXXGAMPSLERQIQI 377          
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: A0A8K1CI48_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CI48_PYTOL)

HSP 1 Score: 155 bits (392), Expect = 1.190e-39
Identity = 96/264 (36.36%), Postives = 142/264 (53.79%), Query Frame = 3
Query:  255 KGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPEC 1046
            KGLRHFS KV ++V+ +  TTY EVA+ LV+EF   +                        P +S Y+EKNIRRRVYDALNVL+A++II++ERK IRW G+PT+    A  L  E                    E+   V++KR+ L + +   +A++     ++ N+                  DE ++ LPFI V T++DTV++CEM E +Q++ F FS  F ++ +   L+RL LH+CP  +L Q+VPD L  ++P EC
Sbjct:  161 KGLRHFSMKVCEKVEEKNVTTYNEVADELVREFVTLR------------------------PNDSGYDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPTNLQHDAEMLIAE------------------RNERMKSVEQKRQHLQDLLVQQVAMKNL---LKRNTKRRKENGTDTLR------DEGRIFLPFIVVNTNKDTVIQCEMSEDRQDIFFNFSNPFEINDDTEILRRLDLHKCPYGELKQIVPDKLMSYLPAEC 373          
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: K3WUL3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUL3_GLOUD)

HSP 1 Score: 155 bits (392), Expect = 2.480e-39
Identity = 95/264 (35.98%), Postives = 143/264 (54.17%), Query Frame = 3
Query:  255 KGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPEC 1046
            KGLRHFS KV  +V+ +  T+Y EVA+ LV+EF   +                        P ++VY+EKNIRRRVYDALNVL+A++II++ERK IRW G+P++       L  E                    E+R  +++K++ L + +   +A++     ++ N+A             +G  DE ++ LPFI V T +DTV++CEM E +Q++ F FS  F ++ +   L+RL LHQC  S+L QLVP+ L   +P EC
Sbjct:  191 KGLRHFSMKVCQKVEEKHVTSYNEVADELVREFVTMR------------------------PNDAVYDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPSNLQHDTEMLIAE------------------RNERRKSLEQKKQHLQDLLVQQVAMKNL---LKRNAARRKAETELSVASESGHGDEGRIFLPFIVVNTAKDTVIQCEMSEDRQDIFFNFSAPFEINDDTEILRRLNLHQCAFSELKQLVPEKLLSCLPAEC 409          
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: A0A0M0JTX1_9EUKA (Transcription factor dp-1 (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JTX1_9EUKA)

HSP 1 Score: 151 bits (381), Expect = 4.060e-38
Identity = 102/291 (35.05%), Postives = 151/291 (51.89%), Query Frame = 3
Query:  213 SKPRRARAA--AKRCGKGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPECINDNAPLFAAA 1079
            SK +R + A   K+  KGLRHFS KV ++V+ +G TTY EVA+ LV EF                   A + A+  +P++  Y+EKNIRRRVYDALNVL+A+ II +E+K+I W G+P++  Q  ARL+ +L                    +   ++RKR  L + V   I+ ++      AN A                  ++Q+ LPFI V T ++TVV CEM E +QE+ F FS  F +  +  TL+R+ + +C   QL  LVP +L ++     +  + P  AAA
Sbjct:  124 SKKKRVQRAHGGKQGDKGLRHFSMKVCEKVEQKGRTTYNEVADELVMEF-------------------ANMAAEGTSPLDQAYDEKNIRRRVYDALNVLMAMEIIYKEKKSILWRGLPSNTEQEHARLQMDLN------------------SRGERMERKRLHLQDLVQQQISFKQLIARNRANEAAGRPLPPA----------DSQIALPFIVVNTKKETVVDCEMAEDKQEIFFNFSAPFEIHDDSETLKRMHMQRCASDQLTALVPPNLVQFARDSSLVTDPPAAAAA 367          
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: A0A3F2S1S5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1S5_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.720e-37
Identity = 91/264 (34.47%), Postives = 137/264 (51.89%), Query Frame = 3
Query:  255 KGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPEC 1046
            KGLRHFS KV  +V+ +  T+Y EVA+ LV+EF   +                        P ++VY+EKNIRRRVYDALNVL+A++II++ERK IRW G+P++       L  E                    E+   V++K++ L + +   +A++     +   +A                 DE ++ LPFI V T +DTV++CEM E +Q++ F FS  F +  +   LQRL LH+   ++L Q+VPD L  ++P EC
Sbjct:   19 KGLRHFSMKVCQKVEEKHVTSYNEVADELVREFVTMR------------------------PNDAVYDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPSNLQHDTEMLLAE------------------RNERMKSVEQKKQHLQDLLVQQVAMKN----LLKRNAERKRLESENPVSAIAARDEGRVFLPFIAVNTSKDTVIQCEMSEDRQDIFFNFSAPFEIHDDADILQRLNLHKARFAELKQMVPDKLLSYLPAEC 236          
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: A0A2D4C957_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C957_PYTIN)

HSP 1 Score: 149 bits (376), Expect = 4.260e-37
Identity = 94/264 (35.61%), Postives = 139/264 (52.65%), Query Frame = 3
Query:  255 KGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPEC 1046
            KGLRHFS +V  +V+ +  TTY EVA+ LV+EF   +                        P ++ Y+EKNIRRRVYDALNVL+AL+II++ERK IRW G+PT+    A  L  E                    E+   V++K++ L + +   +A++     ++ N+                  DE ++ LPFI V T +DTV++CEM E +Q++ F FS  F ++ +   L+RL LH+CPR +L  +VP+ L   VP EC
Sbjct:  191 KGLRHFSLRVCQKVEEKNVTTYNEVADELVREFVTMR------------------------PNDTAYDEKNIRRRVYDALNVLMALDIISKERKEIRWRGLPTNLQHDAEMLIAE------------------RNERVKSVEQKKQHLQDLLVQQVAMKNL---LKRNAKRRKESTLDALR------DEGRIFLPFIVVNTSKDTVIQCEMSEDRQDIFFNFSNPFEINDDTEILRRLDLHKCPREELRHIVPEKLLSHVPTEC 403          
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: G4ZDE1_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZDE1_PHYSP)

HSP 1 Score: 146 bits (368), Expect = 4.230e-36
Identity = 92/264 (34.85%), Postives = 139/264 (52.65%), Query Frame = 3
Query:  255 KGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPEC 1046
            KGLRHFS KV  +V+ +  T+Y EVA+ LV+EF   +                        P ++VY+EKNIRRRVYDALNVL+A++II++ERK IRW G+P++       L  E                    E+   V++K++ L + +   +A++     ++ N+             T    DE ++ LPFI V T +DTV++CEM E +Q++ F FS  F +  +   LQ+L LH+ P + L Q+VPD L  ++P EC
Sbjct:  170 KGLRHFSMKVCQKVEEKHVTSYNEVADELVREFVTMR------------------------PNDAVYDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPSNMQHDTEMLLAE------------------RNERMKSVEQKKQHLQDLLVQQVAMKNL---LKRNAERKRKESENPTAATIVR-DEGRVFLPFIAVNTSKDTVIQCEMSEDRQDIFFNFSAPFEIHDDADILQKLNLHKAPYNDLKQMVPDRLLSYLPAEC 387          
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: A0A0W8CPQ7_PHYNI (Transcription factor Dp-1 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CPQ7_PHYNI)

HSP 1 Score: 143 bits (360), Expect = 9.990e-36
Identity = 91/264 (34.47%), Postives = 139/264 (52.65%), Query Frame = 3
Query:  255 KGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPEC 1046
            KGLRHFS KV  +V+ +  T+Y EVA+ LV+EF   +                        P ++VY+EKNIRRRV DALNVL+A++II++ERK IRW G+P++       L  E                    E+   V++K++ L + +   +A++     ++ N+             T    DE ++ LPFI V T +DTV++CEM E +Q++ F FS  F +  +   LQ+L LH+ P ++L Q+VPD L  ++P EC
Sbjct:   87 KGLRHFSMKVCQKVEEKHVTSYNEVADELVREFVTMR------------------------PNDAVYDEKNIRRRVXDALNVLMAMDIISKERKEIRWKGLPSNLQHDTEMLLAE------------------RNERMKSVEQKKQHLQDLLVQQVAMKNL---LKRNADRKRKESENPTSATIVR-DEGRVFLPFIAVNTSKDTVIQCEMSEDRQDIFFNFSAPFEIHDDADILQKLNLHKAPYAELKQMVPDKLLSYLPAEC 304          
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: D0P1H1_PHYIT (Transcription factor Dp-1 n=29 Tax=Phytophthora TaxID=4783 RepID=D0P1H1_PHYIT)

HSP 1 Score: 145 bits (365), Expect = 1.180e-35
Identity = 92/264 (34.85%), Postives = 140/264 (53.03%), Query Frame = 3
Query:  255 KGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPEC 1046
            KGLRHFS KV  +V+ +  T+Y EVA+ LV+EF   +                        P ++VY+EKNIRRRVYDALNVL A++II++ERK IRW G+P++    +  L  E                    E+   V++K++ L + +   +A++     ++ N+             T    DE ++ LPFI V T +DTV++CEM E +Q++ F FS  F +  +   LQ+L LH+ P ++L Q+VPD L  ++P EC
Sbjct:  172 KGLRHFSMKVCQKVEEKHVTSYNEVADDLVREFVTMR------------------------PNDAVYDEKNIRRRVYDALNVLRAMDIISKERKEIRWKGLPSNLQHDSEMLLTE------------------RNERMKSVEQKKQHLQDLLVQQVAMKNL---LKRNAERKRKESENPTAATIVR-DEGRVFLPFIAVNTSKDTVIQCEMSEDRQDIFFNFSAPFEIHDDADILQKLNLHRAPYTELKQMVPDKLLSYLPAEC 389          
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Match: H3HCT7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCT7_PHYRM)

HSP 1 Score: 144 bits (364), Expect = 1.430e-35
Identity = 92/264 (34.85%), Postives = 137/264 (51.89%), Query Frame = 3
Query:  255 KGLRHFSSKVSDQVQSRGTTTYIEVANHLVQEFHAAKASGWLDRTVEEAADAAAIGADVPAPMNSVYEEKNIRRRVYDALNVLLALNIITRERKAIRWVGVPTDFAQTAARLERELXXXXXXXXXXXXXXXXXXXEKRAEVKRKREELSECVSHLIAVRRCRMAMEANSAXXXXXXXXXXXXTAGGYDETQLKLPFITVATHRDTVVKCEMVEGQQEVSFEFSRQFRVDGEVGTLQRLRLHQCPRSQLGQLVPDHLRKWVPPEC 1046
            KGLRHFS KV  +V+ +  T+Y EVA+ LV+EF   +                        P +SVY+EKNIRRRVYDALNVL+A++II++ERK IRW G+P++       L  E                    E+   V++K++ L + +   +A++     ++ N+             T    DE ++ LPFI V T +DTV++CEM E + ++ F FS  F +  +   LQ+L LH+ P  +L Q+VPD L   +P EC
Sbjct:  165 KGLRHFSMKVCQKVEEKHVTSYNEVADELVREFVTMR------------------------PNDSVYDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPSNLQHDTEMLLAE------------------RNERMRSVEQKKQHLQDLLVQQVAMKNL---LKRNAERKRKESEKPGSATVTR-DEGRVFLPFIAVNTSKDTVIQCEMSEDRHDIFFNFSAPFEIHDDADILQKLNLHKAPYGELKQMVPDKLLSHLPAEC 382          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349005 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YVE1_9STRA1.540e-80100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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BLAST of jgi.p|Trimin1|349005 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CDQ2_9STRA1.110e-190100.00E2F/DP family winged-helix DNA-binding domain-cont... [more]
A0A8K1CI48_PYTOL1.190e-3936.36Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WUL3_GLOUD2.480e-3935.98Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0M0JTX1_9EUKA4.060e-3835.05Transcription factor dp-1 (Fragment) n=1 Tax=Chrys... [more]
A0A3F2S1S5_9STRA1.720e-3734.47Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A2D4C957_PYTIN4.260e-3735.61Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
G4ZDE1_PHYSP4.230e-3634.85Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A0W8CPQ7_PHYNI9.990e-3634.47Transcription factor Dp-1 n=2 Tax=Phytophthora Tax... [more]
D0P1H1_PHYIT1.180e-3534.85Transcription factor Dp-1 n=29 Tax=Phytophthora Ta... [more]
H3HCT7_PHYRM1.430e-3534.85Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_34contigContig_34:280559..282580 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349005|estExt_Genemark1.C_Ctg_340032
Hectar predicted targeting categoryother localisation
TranscriptId349327
TrackFilteredModels1
ProteinId349005
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349005gene_8265Tribonema minus UTEX_B_3156 geneContig_34 280559..282580 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8265_1exon_8265_1Tribonema minus UTEX_B_3156 exonContig_34 280559..280571 +
exon_8265_2exon_8265_2Tribonema minus UTEX_B_3156 exonContig_34 280820..282580 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8265CDS_8265Tribonema minus UTEX_B_3156 CDSContig_34 280559..280571 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_8265UTR3_8265Tribonema minus UTEX_B_3156 three_prime_UTRContig_34 282127..282580 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349005Trimin1|349005|estExt_Genemark1.C_Ctg_340032Tribonema minus UTEX_B_3156 polypeptideContig_34 280559..282126 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8265 ID=mRNA_8265|Name=jgi.p|Trimin1|349005|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1774bp|location=Sequence derived from alignment at Contig_34:280559..282580+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGATGGGCTCAGCAGAGCAGCTCAACGCGCCATGGAGCGGAGCGCTGTC
AGCGCCCTGGTCAGCAGCGCTCAGCTCGCCGTGGAGCGCTGCTGACACCG
CCTCATTGTCAGCACCATGGTCAGCGGAGCAGCTGCACGCGCCATGGAGC
GGAGACAGCAGCCCGCTGTCGGCGCCCTGGTCAGCTGATAAGCTGAGCGC
TGCTGCCGGTGAAGCGCTGTCGGCCCCGTGGTCAGCGGCTACGGGCAAGG
CACTACGCTCGCCCTGGAGCGGCGAACGCGGTTCGCTATTGGCGCCGTGG
TCAGCTGCGCAGCTGAGTGCGCATTGGAATGGAGCAGCGCTGACGGCGCC
CTGGGCAGCAGCGCTCAGCTCGCCGTGGAACAAGGAGGAGCACGCAGCTC
CGTCCGTTTCTACAGCCTCAGCGCAGCAGCTGCGGGCTCCGTGGAGCAGC
AGCAACGCTCAGCTGTTCGCGCCGTGGGCAGCGGCGGCGGCGGCGGCGGC
GGGGGAGCAGCAGCAGCAGCTTAACGCGCCTTGGAGGGGGGGGCTATCTG
CCCCCTGGTCAGCACCAGGAGAGCAGCAGCAGCTCAATGCGCCGTGGAGC
GCTGCTGCTGCCCTGTCGACCCCCTGGTCAGCACCGGAGCAGCTGGTGTC
GCCGTGGAGCGCTGACGCGCAGCAGCAGCAGCAGCAGCTCAACGCGCCGT
GGCGCGCTGCTGCTGCCTTGTCCGCCCCATGGTCAGCATCGGAGCAGCAG
CTGGTGTCGCCGTGGAGTGCAGATGCGCTGTCCGCCCCCTGGCGCAGCAG
CAGCGACGCTCAGCTCTCGGCCCCCTGGAGCAGCAGCGATCAACTCTCCG
CCCCCTGGAGCAGCGACGCTCAGCTCTCTGCCCCCTGGAGCAGCAGCAAT
GCCCAGCTCTCCGCCCCCTGGAGCAGCAGCAATGCTCAACTCTCTGCCCC
CTGGAGCAGCGACGCTCAGCTCTCTGCACCCTGGACCAGCAGCAGCAGCA
ACGCTCAACTATCTGCCCCTTGGAGCAGCAACGCCCAGCTCTCTGCACCC
TGGAGCAGCAGCAGCAGCAGCAGCGCTCAGCTTTCCGCCCCCTGGAGCAG
CAGCGCTCCTCAGCTGGCGGCGCCGTGGGCCGCCGACAGCTACGCGGTGC
AGGCCCCCTGGTACCGCGGCGGCGCCCCCCTGGCGTCCCCCTGGAACCGG
GGCGCAGCCACGCTCAGCGTTGGCAGCATCGCTCACCCTCTGCTGCTGAG
GTTTGCGGCGCTGGCGCTAGGGCTCGTGCTCGCGCGCCGAGCTGCCGCCG
CTAGCAAGAGGCGCCACTGATGAGTCCAGTGTTTGGCGCACGCGCACTGC
GCAGCGTGATATGCGAGGCTCGAGTCGGGCCGCTCTTGTGTGGGGGCTGC
AGCTGCCTTTGGGGCAGCCCCTCACACACACCCCTCTCTTCCCCTTTCCT
CAGGTGTTAGTACCCCCCTCTCCCCATTTTACTGCTTCCCTCGCTCCTTG
TGTCGTGTGGTCAGGCCGGGGTTTGGAGGTAAGCCCGGCCTGCAGTAGTG
CCGCGGGGGTGAGGCGTTTTGCGCCCCTGCTCTTAAGGCTGCGGCGGCAT
TTTGCTCTTGCGCCCGTTGATGTGTGTGCCCAGCCTGGCATGGCCAGTGC
TGCGCTGGCGAGAACACAGTCTGCATGTATCGCCGCTCGGAGGGAGGCCT
GTCATCATTGAAGTTGAAGTTTGCGATTCCGCCACACACAGGGGCCACTG
CCATCAATGACATCTTTCTCCCTC
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protein sequence of jgi.p|Trimin1|349005

>Trimin1|349005|estExt_Genemark1.C_Ctg_340032 ID=Trimin1|349005|estExt_Genemark1.C_Ctg_340032|Name=jgi.p|Trimin1|349005|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=440bp
MMGSAEQLNAPWSGALSAPWSAALSSPWSAADTASLSAPWSAEQLHAPWS
GDSSPLSAPWSADKLSAAAGEALSAPWSAATGKALRSPWSGERGSLLAPW
SAAQLSAHWNGAALTAPWAAALSSPWNKEEHAAPSVSTASAQQLRAPWSS
SNAQLFAPWAAAAAAAAGEQQQQLNAPWRGGLSAPWSAPGEQQQLNAPWS
AAAALSTPWSAPEQLVSPWSADAQQQQQQLNAPWRAAAALSAPWSASEQQ
LVSPWSADALSAPWRSSSDAQLSAPWSSSDQLSAPWSSDAQLSAPWSSSN
AQLSAPWSSSNAQLSAPWSSDAQLSAPWTSSSSNAQLSAPWSSNAQLSAP
WSSSSSSSAQLSAPWSSSAPQLAAPWAADSYAVQAPWYRGGAPLASPWNR
GAATLSVGSIAHPLLLRFAALALGLVLARRAAAASKRRH*
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mRNA from alignment at Contig_34:280559..282580+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8265 ID=mRNA_8265|Name=jgi.p|Trimin1|349005|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2022bp|location=Sequence derived from alignment at Contig_34:280559..282580+ (Tribonema minus UTEX_B_3156 )
ATGATGGGCTCAGGTATTGCGCTTGTTGGAGACACAGACAGAATTGTTTG ACGGCACACACCTTGCAGCATTCACACAGCCTGCTGTGGTGTGGCCAAGT GTTGTATCCCTTCTCTCCCTGCGCATAACCTACCAATGCTTCAAGCAACT GCACAAGGCCCGCACCTCTCATCACACACTGCGCAACCCTCGCTGAATGG CACTCAACAGGGGAGCAGCTGAAGTCTCTCTGGAGCAGCAGCCTCTGTGC CCCGTGGGCAGCAGAGCAGCTCAACGCGCCATGGAGCGGAGCGCTGTCAG CGCCCTGGTCAGCAGCGCTCAGCTCGCCGTGGAGCGCTGCTGACACCGCC TCATTGTCAGCACCATGGTCAGCGGAGCAGCTGCACGCGCCATGGAGCGG AGACAGCAGCCCGCTGTCGGCGCCCTGGTCAGCTGATAAGCTGAGCGCTG CTGCCGGTGAAGCGCTGTCGGCCCCGTGGTCAGCGGCTACGGGCAAGGCA CTACGCTCGCCCTGGAGCGGCGAACGCGGTTCGCTATTGGCGCCGTGGTC AGCTGCGCAGCTGAGTGCGCATTGGAATGGAGCAGCGCTGACGGCGCCCT GGGCAGCAGCGCTCAGCTCGCCGTGGAACAAGGAGGAGCACGCAGCTCCG TCCGTTTCTACAGCCTCAGCGCAGCAGCTGCGGGCTCCGTGGAGCAGCAG CAACGCTCAGCTGTTCGCGCCGTGGGCAGCGGCGGCGGCGGCGGCGGCGG GGGAGCAGCAGCAGCAGCTTAACGCGCCTTGGAGGGGGGGGCTATCTGCC CCCTGGTCAGCACCAGGAGAGCAGCAGCAGCTCAATGCGCCGTGGAGCGC TGCTGCTGCCCTGTCGACCCCCTGGTCAGCACCGGAGCAGCTGGTGTCGC CGTGGAGCGCTGACGCGCAGCAGCAGCAGCAGCAGCTCAACGCGCCGTGG CGCGCTGCTGCTGCCTTGTCCGCCCCATGGTCAGCATCGGAGCAGCAGCT GGTGTCGCCGTGGAGTGCAGATGCGCTGTCCGCCCCCTGGCGCAGCAGCA GCGACGCTCAGCTCTCGGCCCCCTGGAGCAGCAGCGATCAACTCTCCGCC CCCTGGAGCAGCGACGCTCAGCTCTCTGCCCCCTGGAGCAGCAGCAATGC CCAGCTCTCCGCCCCCTGGAGCAGCAGCAATGCTCAACTCTCTGCCCCCT GGAGCAGCGACGCTCAGCTCTCTGCACCCTGGACCAGCAGCAGCAGCAAC GCTCAACTATCTGCCCCTTGGAGCAGCAACGCCCAGCTCTCTGCACCCTG GAGCAGCAGCAGCAGCAGCAGCGCTCAGCTTTCCGCCCCCTGGAGCAGCA GCGCTCCTCAGCTGGCGGCGCCGTGGGCCGCCGACAGCTACGCGGTGCAG GCCCCCTGGTACCGCGGCGGCGCCCCCCTGGCGTCCCCCTGGAACCGGGG CGCAGCCACGCTCAGCGTTGGCAGCATCGCTCACCCTCTGCTGCTGAGGT TTGCGGCGCTGGCGCTAGGGCTCGTGCTCGCGCGCCGAGCTGCCGCCGCT AGCAAGAGGCGCCACTGATGAGTCCAGTGTTTGGCGCACGCGCACTGCGC AGCGTGATATGCGAGGCTCGAGTCGGGCCGCTCTTGTGTGGGGGCTGCAG CTGCCTTTGGGGCAGCCCCTCACACACACCCCTCTCTTCCCCTTTCCTCA GGTGTTAGTACCCCCCTCTCCCCATTTTACTGCTTCCCTCGCTCCTTGTG TCGTGTGGTCAGGCCGGGGTTTGGAGGTAAGCCCGGCCTGCAGTAGTGCC GCGGGGGTGAGGCGTTTTGCGCCCCTGCTCTTAAGGCTGCGGCGGCATTT TGCTCTTGCGCCCGTTGATGTGTGTGCCCAGCCTGGCATGGCCAGTGCTG CGCTGGCGAGAACACAGTCTGCATGTATCGCCGCTCGGAGGGAGGCCTGT CATCATTGAAGTTGAAGTTTGCGATTCCGCCACACACAGGGGCCACTGCC ATCAATGACATCTTTCTCCCTC
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Coding sequence (CDS) from alignment at Contig_34:280559..282580+

>mRNA_8265 ID=mRNA_8265|Name=jgi.p|Trimin1|349005|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1320bp|location=Sequence derived from alignment at Contig_34:280559..282580+ (Tribonema minus UTEX_B_3156 )
ATGATGGGCTCAGCAGAGCAGCTCAACGCGCCATGGAGCGGAGCGCTGTC
AGCGCCCTGGTCAGCAGCGCTCAGCTCGCCGTGGAGCGCTGCTGACACCG
CCTCATTGTCAGCACCATGGTCAGCGGAGCAGCTGCACGCGCCATGGAGC
GGAGACAGCAGCCCGCTGTCGGCGCCCTGGTCAGCTGATAAGCTGAGCGC
TGCTGCCGGTGAAGCGCTGTCGGCCCCGTGGTCAGCGGCTACGGGCAAGG
CACTACGCTCGCCCTGGAGCGGCGAACGCGGTTCGCTATTGGCGCCGTGG
TCAGCTGCGCAGCTGAGTGCGCATTGGAATGGAGCAGCGCTGACGGCGCC
CTGGGCAGCAGCGCTCAGCTCGCCGTGGAACAAGGAGGAGCACGCAGCTC
CGTCCGTTTCTACAGCCTCAGCGCAGCAGCTGCGGGCTCCGTGGAGCAGC
AGCAACGCTCAGCTGTTCGCGCCGTGGGCAGCGGCGGCGGCGGCGGCGGC
GGGGGAGCAGCAGCAGCAGCTTAACGCGCCTTGGAGGGGGGGGCTATCTG
CCCCCTGGTCAGCACCAGGAGAGCAGCAGCAGCTCAATGCGCCGTGGAGC
GCTGCTGCTGCCCTGTCGACCCCCTGGTCAGCACCGGAGCAGCTGGTGTC
GCCGTGGAGCGCTGACGCGCAGCAGCAGCAGCAGCAGCTCAACGCGCCGT
GGCGCGCTGCTGCTGCCTTGTCCGCCCCATGGTCAGCATCGGAGCAGCAG
CTGGTGTCGCCGTGGAGTGCAGATGCGCTGTCCGCCCCCTGGCGCAGCAG
CAGCGACGCTCAGCTCTCGGCCCCCTGGAGCAGCAGCGATCAACTCTCCG
CCCCCTGGAGCAGCGACGCTCAGCTCTCTGCCCCCTGGAGCAGCAGCAAT
GCCCAGCTCTCCGCCCCCTGGAGCAGCAGCAATGCTCAACTCTCTGCCCC
CTGGAGCAGCGACGCTCAGCTCTCTGCACCCTGGACCAGCAGCAGCAGCA
ACGCTCAACTATCTGCCCCTTGGAGCAGCAACGCCCAGCTCTCTGCACCC
TGGAGCAGCAGCAGCAGCAGCAGCGCTCAGCTTTCCGCCCCCTGGAGCAG
CAGCGCTCCTCAGCTGGCGGCGCCGTGGGCCGCCGACAGCTACGCGGTGC
AGGCCCCCTGGTACCGCGGCGGCGCCCCCCTGGCGTCCCCCTGGAACCGG
GGCGCAGCCACGCTCAGCGTTGGCAGCATCGCTCACCCTCTGCTGCTGAG
GTTTGCGGCGCTGGCGCTAGGGCTCGTGCTCGCGCGCCGAGCTGCCGCCG
CTAGCAAGAGGCGCCACTGA
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