mRNA_8197 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|349998 vs. uniprot
Match: A0A835YSM9_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM9_9STRA) HSP 1 Score: 1621 bits (4198), Expect = 0.000e+0 Identity = 805/805 (100.00%), Postives = 805/805 (100.00%), Query Frame = 1
Query: 1 MPPAQPVPSFGTSGRLLHHLEPSPRVTRAAMDYFGGVQQQVVVNDQPEQTQMQVQLPQSRGPGSMTLKRVMSATRIVEYQKASGVKATGLAGDGGPHDEPNFLTKVDKPDPQTMTPLPSAMVIRAIVIINIGVSLAYLYWRVTHTITNIDSYFFGITWLPVRIKMTMDELVREDDSVGYNSRVAILLPTNGENLDVVMKAMLGCISLRGWDASVEKCISQRVVILDEKRRKGVLNMAAAVYALATIVRHPNVLSILQAEGVQAITAKGFYEWWKTGGGYARKHLYNDHFLNQACRLLEYMEEEAANEAVAMSVFGLEELPAGVKGKQDVKRNSKKTTQATANHMLQALNVGNVTIEPGYVQTFNTNVALPTFIYYTRRDAGTPKVSPKAGNMNAALFALDYPDMPPLIGNSTIVVVNDCRHQLQPEFLQRTIPYFFELDADGQRYRWAKVAFVQTPQRFQTNQQADDPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALKGVDADGQQYADTQQRSLIGHRLGFRSEMLIEDTHTSIEMFRAGWGSRYVNEPGEHLSMCTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFTCWGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVTGEPPFNTKVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTDDAWAVRAPTWPLFVVFAGEFAAIVGAMIWVSKEGFEKWAANLISIIVSASLAIHALWPMVSLQMGWQVPSLYYLKLMAWLIIGIFIVVIYYIST 2415
MPPAQPVPSFGTSGRLLHHLEPSPRVTRAAMDYFGGVQQQVVVNDQPEQTQMQVQLPQSRGPGSMTLKRVMSATRIVEYQKASGVKATGLAGDGGPHDEPNFLTKVDKPDPQTMTPLPSAMVIRAIVIINIGVSLAYLYWRVTHTITNIDSYFFGITWLPVRIKMTMDELVREDDSVGYNSRVAILLPTNGENLDVVMKAMLGCISLRGWDASVEKCISQRVVILDEKRRKGVLNMAAAVYALATIVRHPNVLSILQAEGVQAITAKGFYEWWKTGGGYARKHLYNDHFLNQACRLLEYMEEEAANEAVAMSVFGLEELPAGVKGKQDVKRNSKKTTQATANHMLQALNVGNVTIEPGYVQTFNTNVALPTFIYYTRRDAGTPKVSPKAGNMNAALFALDYPDMPPLIGNSTIVVVNDCRHQLQPEFLQRTIPYFFELDADGQRYRWAKVAFVQTPQRFQTNQQADDPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALKGVDADGQQYADTQQRSLIGHRLGFRSEMLIEDTHTSIEMFRAGWGSRYVNEPGEHLSMCTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFTCWGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVTGEPPFNTKVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTDDAWAVRAPTWPLFVVFAGEFAAIVGAMIWVSKEGFEKWAANLISIIVSASLAIHALWPMVSLQMGWQVPSLYYLKLMAWLIIGIFIVVIYYIST
Sbjct: 1 MPPAQPVPSFGTSGRLLHHLEPSPRVTRAAMDYFGGVQQQVVVNDQPEQTQMQVQLPQSRGPGSMTLKRVMSATRIVEYQKASGVKATGLAGDGGPHDEPNFLTKVDKPDPQTMTPLPSAMVIRAIVIINIGVSLAYLYWRVTHTITNIDSYFFGITWLPVRIKMTMDELVREDDSVGYNSRVAILLPTNGENLDVVMKAMLGCISLRGWDASVEKCISQRVVILDEKRRKGVLNMAAAVYALATIVRHPNVLSILQAEGVQAITAKGFYEWWKTGGGYARKHLYNDHFLNQACRLLEYMEEEAANEAVAMSVFGLEELPAGVKGKQDVKRNSKKTTQATANHMLQALNVGNVTIEPGYVQTFNTNVALPTFIYYTRRDAGTPKVSPKAGNMNAALFALDYPDMPPLIGNSTIVVVNDCRHQLQPEFLQRTIPYFFELDADGQRYRWAKVAFVQTPQRFQTNQQADDPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALKGVDADGQQYADTQQRSLIGHRLGFRSEMLIEDTHTSIEMFRAGWGSRYVNEPGEHLSMCTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFTCWGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVTGEPPFNTKVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTDDAWAVRAPTWPLFVVFAGEFAAIVGAMIWVSKEGFEKWAANLISIIVSASLAIHALWPMVSLQMGWQVPSLYYLKLMAWLIIGIFIVVIYYIST 805
BLAST of jgi.p|Trimin1|349998 vs. uniprot
Match: A0A836CP13_9STRA (Glyco_trans_2-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP13_9STRA) HSP 1 Score: 1372 bits (3550), Expect = 0.000e+0 Identity = 690/848 (81.37%), Postives = 739/848 (87.15%), Query Frame = 1
Query: 13 QPVPSFGTSGRLLHHLEPSPRVTRAAMDYFGGVQQQVVVNDQPEQTQMQVQ----------------LPQSRGPGSMTLKRVMSATRIVEYQKASGVKATGLAGDGGPHD-EPNFLTKVDKPDPQTMTPLPSAMVIRAIVIINIGVSLAYLYWRVTHTITNIDSYFFGITWLPV------------------------------RIKMTMDELVREDDSVGYNSRVAILLPTNGENLDVVMKAMLGCISLRGWDASVEKCISQRVVILDEKRRKGVLNMAAAVYALATIVRHPNVLSILQAEGVQAITAKGFYEWWKTGGGYARKHLYNDHFLNQACRLLEYMEEEAANEAVAMSVFGLEELPAGVKGKQDVKRNSKKTTQATANHMLQALNVGNVTIEPGYVQTFNTNVALPTFIYYTRRDAGTPKVSPKAGNMNAALFALDYPDMPPLIGNSTIVVVNDCRHQLQPEFLQRTIPYFFELDADGQRYRWAKVAFVQTPQRFQTNQQADDPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALKGVDADGQQYADTQQRSLIGHRLGFRSEMLIEDTHTSIEMFRAGWGSRYVNEPGEHLSMCTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFTCWGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVTGEPPFNTKVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTDDAWAVRAPTWPLFVVFAGEFAAIVGAMIWVSKEGFEKWAANLISIIVSASLAIHALWPMVSLQMGWQVPSLYYLKLMAWLIIGIFIVVIYYIST 2415
QP ++G +GRL+HHLEPSPRV RAA+DYF V + D PEQTQ +Q +P G ++ KR+ S TRI E+QKASGVKA G+ DGG D +PNFLTK++KPDPQ MTPLPSA VIRAIV++NI VS AYL+WRVT TI ID YFFGI +LPV R+++TMD++VREDDSVGYNSRVAILLPTNGE LDVVMKA+LG +SLRGWD SVEKC +QRVV+LDEKRRKGVLNMAAAVYALATIVRHPNVLSILQAEGV AITAKGFYEWWKTGGGYARKHLYNDHFLNQACRLLEYMEEEA+ EAVAMSVFGLEELPAGVKGKQDVKRNSKKTTQA+AN MLQA+NVGNVTIEPGYVQTFNTNVALPT IYYTRRDAGTPKVSPKAGNMN+ALFALDYPDMPPLIG+STIVVVNDCRHQLQPEFLQRT+PYFFELDADGQRYRWAKVAFVQTPQRF N QADDPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALKGVDADG YAD ++R L+GHRLGFRSEMLIEDTHTSIEMFRAGW SRYVNEPGEHLS+CTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFT WGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGV G+PPFNT VGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGT DAWAVRAPTWPLF VFAGEF AI+GA++WVS+EGFE+WAANLI +IVSASLAIHALWPMVSLQMGWQVPSLYYLKL+AWL+IGIFIV+IYYIST
Sbjct: 215 QPTGAYGANGRLIHHLEPSPRVQRAAVDYFNTVGPNMS-QDTPEQTQPHLQGRPSPSRPPMGAPRATVPGDHGAININAKRLPSQTRITEFQKASGVKAYGVM-DGGVSDVDPNFLTKMNKPDPQGMTPLPSAFVIRAIVVLNICVSCAYLWWRVTRTIFQIDDYFFGIPFLPVQGWAWAFYAVEICLTIAIWIGHTQRLFAVQRVRLTMDDIVREDDSVGYNSRVAILLPTNGEKLDVVMKALLGVVSLRGWDTSVEKCAAQRVVVLDEKRRKGVLNMAAAVYALATIVRHPNVLSILQAEGVHAITAKGFYEWWKTGGGYARKHLYNDHFLNQACRLLEYMEEEASTEAVAMSVFGLEELPAGVKGKQDVKRNSKKTTQASANSMLQAMNVGNVTIEPGYVQTFNTNVALPTLIYYTRRDAGTPKVSPKAGNMNSALFALDYPDMPPLIGSSTIVVVNDCRHQLQPEFLQRTVPYFFELDADGQRYRWAKVAFVQTPQRFTNNVQADDPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALKGVDADGNSYADVKERGLVGHRLGFRSEMLIEDTHTSIEMFRAGWSSRYVNEPGEHLSICTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFTVWGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVCGQPPFNTTVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTADAWAVRAPTWPLFAVFAGEFGAIIGALVWVSQEGFERWAANLICVIVSASLAIHALWPMVSLQMGWQVPSLYYLKLLAWLLIGIFIVLIYYIST 1060
BLAST of jgi.p|Trimin1|349998 vs. uniprot
Match: A0A835ZCE1_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCE1_9STRA) HSP 1 Score: 922 bits (2383), Expect = 0.000e+0 Identity = 468/789 (59.32%), Postives = 575/789 (72.88%), Query Frame = 1
Query: 205 RVMSATRIVEYQKASGVKATGLAGDGGPHDEPNFLTKVDKPDPQTMTPLPSAMVIRAIVIINIGVSLAYLYWRVTHTITNIDSYFFGITWLPVRIK------------------------------MTMDELVREDDSVGYNSRVAILLPTNGENLDVVMKAMLGCISLRGWDASVEKCISQ--RVVILDEKRRKGVLNMAAAVYALATIVRHPNVLSILQAEGVQAITAKGFYEWWKTGGGYARKHLYNDHFLNQACRLLEYMEEEAANEAVAMSVFGLEELPAGVKGKQDVKRNSKKTTQATANHMLQALNVGNVT--------------------IEPGYVQTFNTNVALPTFIYYTRRDAGTPKVSPKAGNMNAALFALDYPDMPPLIGNSTIVVVNDCRHQLQPEFLQRTIPYFFELDADGQRYRWAKVAFVQTPQRFQTNQQA-DDPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALKGVDADGQQYADTQQRSLIGHRLGFRSEMLIEDTHTSIEMFRAGWGSRYVNEPGEHLSMCTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFTCWGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVTGEPPFNTKVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTDDAWAVRAPTWPLFVVFAGEFAAIVGAMIWVSKEGFEKWAANLISIIVSASLAIHALWPMVSLQMGWQVPSLYYLKLMAWLIIGIFIVVIYYIS 2412
R +S R+ + A+G++ + AG G D+ L + KP+PQ L S ++R I+ N+G S YLYWR T TIT ID+YF+ I + PV+I + M++LVREDD VGYN+RVAILLP+ GE LD+VM A+LG +S W + SQ R++ILDEKRRKGVLNM AAVYAL T++R+P V++ILQAEG+ A KGFY+WWK GGGYARKHLYND +LN+AC LLEYME+ A N A S+F L ++P + K + A MLQALN+ + ++ GYV F++N LPT +YYTR+DAGTP+VSPKAGN+NAA+FA+DYP+ PLIG++TIVVVNDCRHQL P FLQRT+PYFFELDA+GQ Y WA+VAFVQTPQRF+ +Q DDPLGNHAAVQYDVIN GKDGIGAVSSSG GSLWRV AL+G D DG++YAD IG LGFRS+MLIEDTHTSI+MFR GW SRYVNEPGEHLS+CTHQPNSIAWRIKQVLRWHQGAVQLLF+KGI +T +GG+FPT++HRIYAFDQATYYLQAIPGY+LLLMPIIYG+TG PF T+V +FFL+FTP+IVT MLPTVISGSW VD+++L RDEQVWLSTTYVQIYAFLSM W +RC+ ++AWA++APTWPLF VF G+ AA+ G + WV K GF WA NLIS+ SA L +HALWPMVSLQMGW++PS+Y +K++ W ++G FIV+I ++S
Sbjct: 169 RWLSRGRVNSFAAAAGLRPSEAAG-GAYADDAVVLKQQFKPNPQAFFALGSTPLLRLIMAANVGFSALYLYWRATSTITTIDTYFYNIKYFPVQIWAWVFYGVEICLTIGILIGHTQRMFPIKRAIVAMEDLVREDDCVGYNARVAILLPSAGERLDIVMLALLGAMSQSTWRGG-NRTTSQMLRIIILDEKRRKGVLNMTAAVYALGTLIRNPEVVTILQAEGIDAENVKGFYDWWKFGGGYARKHLYNDPWLNKACLLLEYMEKHAGNGEDADSIFLLSDMPIDAAAGSKAALHGK-DVEEFARSMLQALNIPTPSPDAGXXXXXXXXXXXXXXXXVDAGYVHQFSSNPDLPTLLYYTRKDAGTPRVSPKAGNLNAAIFAVDYPEDDPLIGDATIVVVNDCRHQLNPTFLQRTVPYFFELDAEGQHYGWARVAFVQTPQRFKPDQMTLDDPLGNHAAVQYDVINRGKDGIGAVSSSGHGSLWRVEALRGADVDGRRYADPTVVDNIGKTLGFRSQMLIEDTHTSIDMFRHGWTSRYVNEPGEHLSICTHQPNSIAWRIKQVLRWHQGAVQLLFYKGISYTSFGGRFPTLWHRIYAFDQATYYLQAIPGYILLLMPIIYGLTGNSPFETRVADFFLYFTPYIVTGMLPTVISGSWGDVDANKLQRDEQVWLSTTYVQIYAFLSMLWTSLRCQKHENAWAIKAPTWPLFTVFFGQVAALGGGLFWVGKYGFRAWAQNLISVFASALLCMHALWPMVSLQMGWKIPSMYIIKILVWALLGGFIVLINHLS 954
BLAST of jgi.p|Trimin1|349998 vs. uniprot
Match: A0A835YVP7_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP7_9STRA) HSP 1 Score: 904 bits (2337), Expect = 0.000e+0 Identity = 453/738 (61.38%), Postives = 561/738 (76.02%), Query Frame = 1
Query: 310 TKVDKPDPQTMTPLPSAMVIRAIVIINIGVSLAYLYWRVTHTITNIDSYFFGITWLPVR----------IKMTMDELVREDDSV----GYNSRVAILLPTNGENLDVVMKAMLGCISLRGWDASVE-KCISQRVVILDEKRRKGVLNMAAAVYALATIVRHPNVLSILQAEGVQAITAKGFYEWWKTGGGYARKHLYNDHFLNQACRLLEYMEEEAANEAVAMSVFGLEELPAGVKGKQDVKRNSKKTTQATANHMLQALNV--GNVTIEPGYVQTFNTNVALPTFIYYTRRDAGTPKVSPKAGNMNAALFALDYPDMPPLIGNSTIVVVNDCRHQLQPEFLQRTIPYFFEL-----DADGQRYRWAKVAFVQTPQRFQTNQQA-DDPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALKGVDADGQQYADTQQRSLIGHRLGFRSEMLIEDTHTSIEMFRAGWGSRYVNEPGEHLSMCTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFTCWGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVTGEPPFNTKVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTDDAWAVRAPTWPLFVVFAGEFAAIVGAMIWVSKEGFEKWAANLISIIVSASLAIHALWPMVSLQMGWQVPSLYYLKLMAWLIIGIFIVVIYYIST*EARGTQGARRVS 2454
+K KPDPQ TP+ S ++IR +++ N+ S+ YL+WRVT TIT I+SYFFGI LPV+ I +T+ + + YN+RV ILLPT GE LD+VM A+LGCIS R W + K +V++LDEKRRK VL M AAVYALAT+ R P+++ ILQAE +I AKG YEWW+ GGG+AR+HLYND LN+AC+LLE+M + E ++F L E+P D K+ S + +LQALN+ G I P ++Q+F+TN ALPT +YYTRRD GTP+VSPKAGNMN+ALF +DYPD L+G+STI+ VNDCRHQLQP FLQRT+PYFF+L D G Y W +VAFVQTPQRF + A DDPLGN+AAVQYD+INHGKDGIGAVSSSG GSLWRV ALKG+ ADG +YAD R+LIG +GFRSEMLIEDTHTSI+MFR GW SRYVNEPGEHLS CTHQP+SIAWRIKQVLRWHQGAVQLLF+KGI FT +GGKFPTI+HR+YAFDQATYYLQAIPGY+LLLMPIIYG+TGE PFNT+V EFFLFFTP+IV+AMLPT+ISGSWRGVD+++L RDEQVWLSTTYVQ+YAFLSM +RC+ ++AWAV+APTWPLF VF GEF AI GA+ WV++ GF++W+ NL+S++ SA+LA+ ALWPMV++QMGW++PS Y+LK++ W +G+ +V I ++S AR + VS
Sbjct: 4 SKTTKPDPQRTTPMSSHLLIRCVILANLAFSVLYLWWRVTSTITTINSYFFGIKALPVQAWGWTFYAVEICLTIGIWIGHSQRLFAVSSYNARVCILLPTAGERLDIVMLALLGCISQRMWACGRKSKSAMFKVIVLDEKRRKAVLQMCAAVYALATLARSPSIVQILQAENAASIDAKGLYEWWRDGGGHARRHLYNDSHLNRACQLLEFMLRLSLCEGNEGNLFNLTEMPEDQLQSPDQKKRS---ARHLVEGLLQALNIPQGAAKIPPAFMQSFSTNGALPTLVYYTRRDPGTPRVSPKAGNMNSALFPIDYPDDESLVGDSTIIAVNDCRHQLQPNFLQRTVPYFFKLQQSANDGSGLEYTWDRVAFVQTPQRFPKDMNAEDDPLGNNAAVQYDIINHGKDGIGAVSSSGHGSLWRVEALKGLAADGTRYADPTNRALIGSEVGFRSEMLIEDTHTSIDMFRHGWTSRYVNEPGEHLSTCTHQPDSIAWRIKQVLRWHQGAVQLLFYKGITFTSFGGKFPTIWHRVYAFDQATYYLQAIPGYILLLMPIIYGITGESPFNTEVAEFFLFFTPYIVSAMLPTLISGSWRGVDANKLQRDEQVWLSTTYVQVYAFLSMLATALRCQKHENAWAVKAPTWPLFAVFFGEFCAIGGALFWVARYGFDRWSQNLLSVLASAALAVFALWPMVAMQMGWRIPSAYHLKVLVWATLGVLVVGIDFLSRLGARDERAMGAVS 738
BLAST of jgi.p|Trimin1|349998 vs. uniprot
Match: D7FSC3_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSC3_ECTSI) HSP 1 Score: 763 bits (1970), Expect = 3.580e-260 Identity = 403/807 (49.94%), Postives = 521/807 (64.56%), Query Frame = 1
Query: 178 RGPGS-MTLKRVMSATRIVEYQKASGVKATGLAGDGGPHDEPNFLTKVDKPDPQTMTPLPSAMVIRAIVIINIGVSLAYLYWRVTHTITNIDSYFFGITW---------------------------LPV-RIKMTMDELVREDDSVGYNSRVAILLPTNGENLDVVMKAMLGCISLRGWDASVEKCISQRVVILDEKRRKGVLNMAAAVYALATIVRHPNVLSILQAEGVQAITAKGFYEWWKTGGGYARKHLYNDHFLNQACRLLEYMEEEAANEAVAMSVFGLEELPAGV------------------KGKQDVKRNSKKTTQATANHMLQALNVGNVTIEPGYVQTFNTNV-------------ALPTFIYYTRRDAGTPKVSPKAGNMNAALFALDYPDMPPLIGNSTIVVVNDCRHQLQPEFLQRTIPYFFELD------ADGQRYRWAKVAFVQTPQRFQTNQQADDPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALKGVDADGQQYADTQQRSLIGHRLGFRSEMLIEDTHTSIEMFRAGWGSRYVNEPGEHLSMCTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFTCWGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVTGEPPFNTKVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTDDAWAVRAPTWPLFVVFAGEFAAIVGAMIWVSKEGFEKWAANLISIIVSASLAIHALWPMVSLQMGWQVPSLYYLKLMAWLIIGIFIVVI 2400
+G GS +++R M+ +R+ +++ASG++ D F +V +PQ PSA ++R + + N G+ + YL+WR T T + ++W PV RIK+TMD++ DD VGYN+RV ILLPT GENL+VV KA++G +S R WD+ + + RV++LDEKRR V +AA V+ + ++ + IL AEGV +T KGF +W + G GY RKHLY+D LN+A ++L ++ + F LE P+ K V+ ++ + A + + L + I PG+ + + T++ LPT IYY+R++AGTPK+SPKAGNMNAA+F +D P M PL G STIVVVND RHQL+ FLQRT+PYFFEL A G RYRWAKVAFVQTPQRF+ + ++DPLGNHA QYDVINHGKDGIGAVSSSGQGSLWRV ALKG DG+ D + L+G +LGFRSEMLIEDTHTSIE+FR GW S YVNEPGE L+ CTHQP+S+ WRIKQVLRWHQGAVQLL FKGI +T +GG FPT++HR+YAFDQATYYLQAIPGY+LL+MPI+YGVTG PPF T + ++F +FTPFIVTA+LPT IS WR +DSHRLTRDEQ WLSTTYVQIYAFL + W + K ++AW + PTWPL VF G+ A+ G + WV ++GF W AN SI+V A LA+HALWPMVSL +GW +PS YY+KL W+ +G VV+
Sbjct: 212 KGVGSRFSVRRFMTGSRMGSFKRASGMEDDD-------QDSNLFFDRVYCANPQEKRLFPSAHLVRVLAVANAGLGVLYLHWRYTSTFPPTVGRWDYMSWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSGLPGSQTLRVIVLDEKRRLEVYRVAAGVHRIGELLAGRRIQQILMAEGVTELTQKGFIDWCRNGSGYERKHLYDDKKLNEAVQVLRLLDAMCLANGLT-DAFALEARPSSATYNPITAAAWNAAAQAQKSNKPSVEAMAEMSDAARSEAEAKMLGASAMNITPGFFEVYGTHLDPDNMETSKEVQKGLPTLIYYSRKNAGTPKISPKAGNMNAAIFPVDDPTMTPLTGESTIVVVNDARHQLEGNFLQRTVPYFFELAGGHPTVASGGRYRWAKVAFVQTPQRFRM-ELSNDPLGNHAISQYDVINHGKDGIGAVSSSGQGSLWRVEALKGQRPDGKIVDDPTELDLVGKKLGFRSEMLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPSSLTWRIKQVLRWHQGAVQLLLFKGIRYTSFGGHFPTMWHRLYAFDQATYYLQAIPGYVLLIMPIVYGVTGTPPFVTSLKDYFQYFTPFIVTALLPTAISSQWRKIDSHRLTRDEQTWLSTTYVQIYAFLQVVWTGLTRKSPENAWVAKVPTWPLTFVFLGQVFAVAGGVYWVVQKGFVIWYANFFSIVVVAGLAMHALWPMVSLSLGWSIPSFYYIKLFLWVFLGFSAVVL 1009
BLAST of jgi.p|Trimin1|349998 vs. uniprot
Match: A0A835YHN4_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHN4_9STRA) HSP 1 Score: 740 bits (1910), Expect = 1.840e-253 Identity = 388/779 (49.81%), Postives = 511/779 (65.60%), Query Frame = 1
Query: 373 AIVIINIGVSLAYLYWRVTH-TITNIDSYFFGITWLP-------VRIK------------------------------MTMDELVREDDSVGYNSRVAILLPTNGENLDVVMKAMLGCISLRGWDASVEKCISQRVVILDEKRRKGVLNMAAAVYALATIVRHPNVLSILQAEGVQAITAKGFYEWWKTGGGYARKHLYNDHFLNQACRLLEYMEEEAANEAVAMSVFGLEELPAGVK--GKQDVKRNSKKTTQATANHMLQALNVGNVTIEPGYVQTFNTNVALPTFIYYTRRDAGTPKVSPKAGNMNAALFALDYPDMPPLIGNSTIVVVNDCRHQLQPEFLQRTIPYFFELDADGQRYRWAKVAFVQTPQRFQTNQQADDPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALKGVDADGQQYADTQQRSLIGHRLGFRSEMLIEDTHTSIEMFRAGWGSRYVNEPGEHLSMCTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFTCWG--GKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVTGEPPFNTKVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTDDAWAVRAPTWPLFVVFAGEFAAIVGAMIWVSKEGFE-------------------------------------------------------------KWAANLISIIVSASLAIHALWPMVSLQMGWQVPSLYYLKLMAWLIIGIFIVVI 2400
A V++N+ + YLYWRVT +IT+I + G W+P VRI + MD+L D ++ YN+RV++ LPT GE DVV+KA+LGC++ RGW A+ K R+++LDEK+RKGVL + AA Y LA + +P + ILQ EGV ++ A + WWKTGGG+AR+ L++ L + C ++E M++ A NE +G + P+ V+ + ++ + +AT L+ + + NVTI+PGY++T+ ++ LP IYY+R++ GTPKVSPKAGNMNAA+F +DYP+ PLIG+STIVVV+DCRHQLQP+FLQRT+PYFFEL Y WAKVAFVQTPQRF ++ DDPLGNHAA+QYDVINHGKDGIGAV SSG GSLWRVAAL+G+DA+G+ YAD L+GH+LGFRSEMLIEDTHTS+EMFRAGW S Y+NEP E+LS+CTHQP++IAWRIKQVLRWHQGAVQLL+FKG +T + ++PT++HR+Y FDQ TYY+QAIPGYMLL+MPI+YGVTG+ PF+ + +FF+ F PFIVTA+LPTVI G+ GVD RL+RDEQVWLSTTY+Q+YAF SM WQ C DAW V+APTWPLFV F GEF AI+G + W+ F+ +W N IS++ SA++AI ALWPMV++Q GW+ SLY KL+A++I+G I+ +
Sbjct: 57 ATVLLNLATAAYYLYWRVTGGSITDIQNGMPGDQWVPDNPGPIWVRIYAWLFFASEACLIIGIMIGHSQRLFAVQRTVVNMDDLALVDSNITYNARVSVFLPTAGEKPDVVLKALLGCMAQRGWGAA-SKLSYMRIIVLDEKKRKGVLALTAAAYKLAECMLNPELQRILQFEGVLSLNAIDVFAWWKTGGGHARQFLHDHDLLYEICAIMELMDDIAKNENGGKGTWGKPKDPSKVRHFNLEVGDKSYFEKNRAT----LEDIIMPNVTIDPGYIKTYESSDLLPRVIYYSRKEPGTPKVSPKAGNMNAAIFPIDYPEQVPLIGDSTIVVVDDCRHQLQPDFLQRTVPYFFELHKPSNTYTWAKVAFVQTPQRFPFQKEKDDPLGNHAAMQYDVINHGKDGIGAVGSSGHGSLWRVAALRGLDANGRCYADPSNLRLVGHKLGFRSEMLIEDTHTSLEMFRAGWRSVYINEPNENLSVCTHQPDNIAWRIKQVLRWHQGAVQLLWFKGPWYTTFSPCAQYPTMWHRLYGFDQCTYYMQAIPGYMLLVMPIVYGVTGQAPFSATIFDFFVRFIPFIVTAVLPTVILGNRPGVDMDRLSRDEQVWLSTTYIQMYAFFSMTWQIFTCAKAGDAWTVKAPTWPLFVAFYGEFLAILGGLFWLIYNNFQNNRIQNNSSNAAEAFNINSNKEQIRINNLRPDLINEATKNSTQLRMTNEFIISNLIGYPQIQWFLNFISVVASAAMAIFALWPMVAMQKGWKPLSLYQSKLVAYVIVGGMIIAV 830
BLAST of jgi.p|Trimin1|349998 vs. uniprot
Match: D7FSC4_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSC4_ECTSI) HSP 1 Score: 722 bits (1864), Expect = 3.500e-247 Identity = 385/772 (49.87%), Postives = 507/772 (65.67%), Query Frame = 1
Query: 175 SRGPGSMTLKRVMSATRIVEYQKASGVKATGLAGDGGPHDEPNFLTKVDKPDPQTMTPLPSAMVIRAIVIINIGVSLAYLYWRVTHT-------------ITNIDSYFFGITWLP--------VRIKMTMDELVREDDSVGYNSRVAILLPTNGENLDVVMKAMLGCISLRGWDASVEKCISQ----RVVILDEKRRKGVLNMAAAVYALATIVRHPNVLSILQAEGVQAITAKGFYEWWKTGGGYARKHLYNDHFLNQACRLLEYMEEEAANEAVAMSVFGLEE----LPAGVKGKQDVKRNSKKTTQATANHMLQALNVGNVTIEPGYVQTFNTNVALPT-FIYYTRRDAGTPKVSPKAGNMNAALFALDYPDMPPLIGNSTIVVVNDCRHQLQPEFLQRTIPYFFELDADGQRYRWAKVAFVQTPQRFQTNQQADDPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALKGVDADGQQYADTQQRSLIGHRLGFRSEMLIEDTHTSIEMFRAGWGSRYVNEPGEHLSMCTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFTCWGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVTGEPPFNTKVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTDDAWAVRAPTWPLFVVFAGEFAAIVGAMIWVSKEGFEKWAANLISIIVSASLAIHALWPMVSLQMGWQVPSLYYLKLMAWLIIGIFIVVI 2400
S G + L ++ A + ASG +G G +D P F+ + +K +PQT S+ +IR +V++N+ Y+ WR T ++ + WL RI+ TMD++V D +VG N+ VAILLPT GE LDVV+K +LG S R W +S + + RV++LDEKRRK V + + V+AL+T + P+ ILQAEGV+ +T FYEW G+ + H++ D L++A ++ M++ + ++ L+ L G+ +D+ ++ + H + L +V I PG+ Q F IYY+R+DAGTP++SPKAGNMNAA+F +D P PPLIG STIVVVND RHQLQPEFLQRT PYFF++DA Q+Y+WAKVAFVQTPQRF+ + DDPLGNHAA QYDVIN GKDGIGAVSSSGQGSLWRV ALKG DG+ D + L+G +LGFR+EMLIEDTHTSIE+FR GW S YVNEPGE L+ CTHQP ++ WRIKQVLRWHQGAVQLL+ KG+ +T +GG FPT+FHR+YAFDQATYYLQAIPGY+LLLMP++YGVTG+PPFNT + +F +F PFIVTA+LPTVIS WR +DSHRLTRDEQ WLSTTYVQIYAFL + W ++ D AW R PTWPL +VFA +F AI GA+ W GF+ + N +SI A L + LWPM++LQ+G PS ++ KL A++++G+ +V++
Sbjct: 31 SGGGFTQRLGKMQEALGMAHSTPASGTDKR-RSGKHGAYD-PRFVQRGEKINPQTKESFSSSFLIRGVVVLNVASGFTYMVWRFLKTQDVPPEYKWXXXVFFMVEVFLLFAIWLGHSQRLFAVQRIRTTMDQIVSIDPAVGANAVVAILLPTAGERLDVVLKCLLGASSQRSWPSSSAAKMGRGDGLRVIVLDEKRRKEVYMLTSGVHALSTQILAPSTRKILQAEGVRNLTPLAFYEWCHEKRGFGKVHIFKDVGLSRAVAMVRQMDDLVTGDDGG-DLYRLDRNQSFLNQGLD--EDISKSKEGDEVEELTHGVSLLADESVHITPGFFQVFRGQAKQAACMIYYSRKDAGTPRISPKAGNMNAAMFPIDDPTSPPLIGPSTIVVVNDARHQLQPEFLQRTTPYFFDVDAITQQYKWAKVAFVQTPQRFRKDL-PDDPLGNHAASQYDVINIGKDGIGAVSSSGQGSLWRVEALKGRSPDGKTGVDPKDLGLVGKKLGFRAEMLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPTNLTWRIKQVLRWHQGAVQLLYTKGLRYTSFGGSFPTVFHRMYAFDQATYYLQAIPGYVLLLMPVVYGVTGQPPFNTDITSYFSYFVPFIVTAVLPTVISAQWRSIDSHRLTRDEQTWLSTTYVQIYAFLQVSWTRLIRGNPDHAWVARVPTWPLTLVFAAQFVAIAGAVYWTLHNGFDTYYKNTLSICAGAFLGMFYLWPMMALQVGLGRPSFWFFKLGAYVVLGVSMVIL 796
BLAST of jgi.p|Trimin1|349998 vs. uniprot
Match: D7FIF6_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF6_ECTSI) HSP 1 Score: 504 bits (1297), Expect = 3.530e-152 Identity = 282/711 (39.66%), Postives = 415/711 (58.37%), Query Frame = 1
Query: 328 DPQTMTPLPSAMVIRAIVIINIGVSLAYLYWRVTHTITNIDSYFFGITWLPV--------------------RIKMTMDELVREDDSVGYNSRVAILLPTNGENLDVVMKAMLGCISLRGWDASVEKCISQRVVILDEKRRKGVLNMAAAVYALATIVRHPNVLSILQAEGVQAITAKGFYEWWKTGGGYARKHLYNDHFLNQACRLLEYMEEEAANEAVAMSVFGLEELPAGVKGKQDVKRNSKKTTQATANHMLQALNVGNVTIEPGYVQTFNTNVALPTFIYYTRRDAGTPKVSPKAGNMNAALFALDYPDMPPLIGNSTIVVVNDCRHQLQPEFLQRTIPYFFELDADGQRYRWAKVAFVQTPQRF--QTNQQADDPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALK-GVDADGQQYADT-QQRSLIGHR--LGFRSEMLIEDTHTSIEMFRAGWGSRYVNEPGEHLSMCTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFTCWGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVTGEPPFNTKVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTDDAWAVRAPTWPLFVVFAG-EFAAIVGAMIWVSKEGFEKWAANLISIIVSASLAIHALWPMVSLQMGWQVPSLYYLKLMAWLII 2379
+PQ PSA IR I +IN+ AYL+WR+T ++ +D + +L R K+ MD+L D+++G +VA+L+PT GE V++KA+ G + LR W + + + R+++LDEKRR+ V + + VY L+ +V V IL EGV I+AKGFYE + G R +Y+D + ++ +++ A +S F P+ + R ++ +A+ + I+PG + +N N +PT +YY+R DAG P++SPKAGNMN A+F+ + P PLIG + ++V+ND RH+L PEFLQRT+PYFF D + Y+WA +AF+QTPQRF +T+ DPLGN AA Q+D++N G+DG G S GQGS+WRV L+ G+ DG ++ +G + LGFR+E+LIEDTHTSI++FR GW S YVN P E L+ CT P+++ WR KQVLRWHQGAVQL +KG G+ G + T F +++AFD +Y+LQA G +LL+ PI+YG T PFNT EF L+F PFI+T +LPTV + W+ S ++ RDEQ+W +T++VQIYA + W I K +AW + P WPL++ F A W ++ E W +S I SA A+H+LWP+VS +G +P +Y ++ L++
Sbjct: 1318 EPQHTESAPSAWWIRTIGVINLLCMAAYLWWRITRSLKGVDHIIWAFIFLSAECIMAIGMIVGHSSRSFPAHREKVYMDDLTDIDEAIGA-LKVAVLIPTCGEKTAVMLKALFGNLQLRLWKSKNARRDTLRILVLDEKRREEVHKLVSLVYTLSEVVLDKTVREILMREGVAPISAKGFYEHFANGEHGQR--MYDDVNFIRGIEVVSEIDKLIAENDDNISRFS----PSVA-----ISRIKERARRASCFDRKE--------IQPGQKKVWNRNKYIPTIVYYSRIDAGQPRISPKAGNMNRAIFSFN-PQEEPLIGEAAVIVINDVRHELYPEFLQRTVPYFFTFDKPRRCYKWANIAFIQTPQRFHDRTDWNDPDPLGNQAATQFDIVNSGRDGAGGALSCGQGSVWRVQVLRDGIRPDGTKFVKKGMPEDQVGQQGGLGFRAEVLIEDTHTSIDLFRQGWKSVYVNFPNERLACCTLPPDTVKWRWKQVLRWHQGAVQLAMWKGWGYAVLGENWGTTFQKVFAFDAVSYFLQAFAGEILLIFPIVYGFTNSAPFNTWNIEFALYFFPFIITGVLPTVAALGWQKTPSAKVMRDEQIWFATSFVQIYAVMHAVWGTITRKDPSNAWECKCPVWPLYLHFVAITIAVCFNTADWAARSYEEPWVW--VSCIGSALFALHSLWPVVSFGLGVTMPEAFYTRVFGMLVV 2005
BLAST of jgi.p|Trimin1|349998 vs. uniprot
Match: A0A835YIK8_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIK8_9STRA) HSP 1 Score: 470 bits (1209), Expect = 1.570e-150 Identity = 281/649 (43.30%), Postives = 374/649 (57.63%), Query Frame = 1
Query: 484 RIKMTMDELVREDDSVGYNSRVAILLPTNGENLDVVMKAMLGCISLRGWDASVEKCISQRVVILDEKRRKGVLNMAAAVYALATIVRHPNVLSILQAEGVQAITAKGFYEWWKTGGGYARKHLYNDHFLNQACRLLEYMEEEAANEAVAMSVFGLEELPAGVKGKQDVKRNSKKTTQATANHMLQALNVGNVTIEPGYVQTFNTNVALPTFIYYTRRDAGTPKVSPKAGNMNAALFALDYPDMPPLIGNSTIVVVNDCRHQLQPEFLQRTIPYFFELDAD-GQRYRWAKVAFVQTPQRFQ-TNQQAD-DPLGNHAAVQYDVINHGKDGIGAVSSSGQGSLWRVAALK-GVDADGQQYADTQ--QRSLIGHR--LGFRSEMLIEDTHTSIEMFRAGWGSRYVNEP----GEHLSMCTHQPNSIAWRIKQVLRWHQGAVQLLFFKGIGFTCWGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVTGEPPFNTKVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTDDAWAVRAPTWPLFVVFAGEFAAIVGAMI-----WVSKEGFEKWAANLISIIVSASLAIHALWPMVSLQMGWQVPSLYYLKLMAWLII 2379
R ++TMDELV D G + +VAILLPT GE L V+++A+ G + LR W +S +C + RV+ILDEKRR V +A+ VY LA +V V IL+ E V A TA+ FYE + G R+H N L + E + SV L+ +A TI PG+ +T+ N LPT +Y++R DAG P+VSPKAGNMN A+F D LI + ++VVND RH LQPEFLQR +PYFF DA Y WA VAFVQTPQRF Q AD DPLGN AA Q+D++N G+DG V S GQGSLWRVAAL+ G+ DG +Y DT+ + LIG LGFRSE+LIEDTHTS+++ R GW S YV P GE L+ CT P+S+ WR+KQVLRWHQGAVQL G + G + + + R++A D TY LQA G +LL+ PI+YG T + PFN +F +F PF++TA LPT+ + W S R+ RDEQVW +TTYVQ+ A ++ W ++ + DAW P WPL+ +F AI AM+ W+ + W +S + + A+H+LWP+VS +G +P YY ++ LI+
Sbjct: 55 RERVTMDELVDSDPQTG-DLKVAILLPTAGEKLQVMLQALFGVLQLRLWSSSRARCDTLRVIILDEKRRWQVQQLASLVYTLAEVVLDKGVRDILRREEVPASTARAFYELFSDG---LRRHTMNTDNLMFVRGVAIVDEIDKLLHDSDGSVHRLDGTATTSLAPPXXXXXXXXXXXXXXVRARRASCFVQNTISPGFTKTWAKNARLPTLVYHSRTDAGMPRVSPKAGNMNCAIFRKDGKGET-LIAGAAVIVVNDARHALQPEFLQRALPYFFTRDARRAGAYVWADVAFVQTPQRFDDVPQWADPDPLGNQAATQFDIVNPGRDGASGVLSCGQGSLWRVAALRDGIRPDGSKYIDTKADREGLIGRTGGLGFRSEVLIEDTHTSLDLLRQGWRSVYVVSPASSKGEVLARCTLPPDSVTWRVKQVLRWHQGAVQLALSHGFAYVFGSGHWASPWQRVFALDAITYVLQAFAGQILLVFPIVYGFTNQSPFNALNLQFATYFFPFLITAALPTMAALGWLKTSSDRVMRDEQVWFATTYVQLQAVCNVIWCKLLRRDPADAWTATCPVWPLYA----QFLAIAAAMVANTGYWIQRGFTSPWVW--VSCMGAGLFALHSLWPLVSFGLGVTLPPAYYNRVFGMLIL 692
BLAST of jgi.p|Trimin1|349998 vs. uniprot
Match: A0A835YH70_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH70_9STRA) HSP 1 Score: 407 bits (1047), Expect = 2.030e-131 Identity = 197/318 (61.95%), Postives = 234/318 (73.58%), Query Frame = 1
Query: 1600 LIEDTHTSIEMFRAGWGSRYVNEPGEHLSMCTHQPNSIAWRIKQV-----------------------------------------------LRWHQGAVQLLFFKGIGFTCWGGKFPTIFHRIYAFDQATYYLQAIPGYMLLLMPIIYGVTGEPPFNTKVGEFFLFFTPFIVTAMLPTVISGSWRGVDSHRLTRDEQVWLSTTYVQIYAFLSMCWQQIRCKGTDDAWAVRAPTWPLFVVFAGEFAAIVGAMIWVSKEGFEKWAANLISIIVSASLAIHALWPMVSLQMGWQVPSLYYLKLMAWLIIGIFIVVIYYIS 2412
LIEDTHTSI+MFR GW SRYVNEPGE LS CTHQP+SIAWRIKQV LRWHQGAVQLLF+KGI +T +GGKFPT++HR+YAFDQATYYLQAIPGY+LLLMPIIYGVTGE PFNT V EFFLFFTP++V+AMLPT+ISG+WR VD+ RL RDEQVWLSTTYVQIYAFLSM W +RC+ ++AWAV+AP WPLF VFAGEFAA+ GA+ WV+ GF+ WA NLIS++ SA LA++ALWPMV+LQM W+ PS Y+LK++ W +G +V + Y+S
Sbjct: 1 LIEDTHTSIDMFRHGWTSRYVNEPGEQLSSCTHQPDSIAWRIKQVRAPPPPLLSLVVLQIEDSVRLSARCSSHTRTPARQHRVAHQAALLQVLRWHQGAVQLLFYKGISYTSFGGKFPTVWHRVYAFDQATYYLQAIPGYLLLLMPIIYGVTGESPFNTDVAEFFLFFTPYVVSAMLPTLISGAWRNVDADRLQRDEQVWLSTTYVQIYAFLSMLWTSLRCQKHENAWAVKAPVWPLFAVFAGEFAALGGALFWVAHFGFDNWAQNLISVVASALLAVYALWPMVALQMRWRAPSAYHLKVLVWAALGALVVGVDYLS 318 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349998 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8197 ID=mRNA_8197|Name=jgi.p|Trimin1|349998|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2768bp|location=Sequence derived from alignment at Contig_53:533962..540714+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCCACCTGCACAGCCCGTTCCCTCCTTCGGCACATCAGGAAGGCTGCTback to top protein sequence of jgi.p|Trimin1|349998 >Trimin1|349998|estExt_Genemark1.C_Ctg_530069 ID=Trimin1|349998|estExt_Genemark1.C_Ctg_530069|Name=jgi.p|Trimin1|349998|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=806bp MPPAQPVPSFGTSGRLLHHLEPSPRVTRAAMDYFGGVQQQVVVNDQPEQTback to top mRNA from alignment at Contig_53:533962..540714+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8197 ID=mRNA_8197|Name=jgi.p|Trimin1|349998|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6753bp|location=Sequence derived from alignment at Contig_53:533962..540714+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_53:533962..540714+ >mRNA_8197 ID=mRNA_8197|Name=jgi.p|Trimin1|349998|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2418bp|location=Sequence derived from alignment at Contig_53:533962..540714+ (Tribonema minus UTEX_B_3156 )back to top |