mRNA_8190 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|167786 vs. uniprot
Match: A0A835YPU4_9STRA (Sec1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU4_9STRA) HSP 1 Score: 1196 bits (3093), Expect = 0.000e+0 Identity = 610/610 (100.00%), Postives = 610/610 (100.00%), Query Frame = 1 Query: 1 MLSLCSSIAVFLCRVCRECVRQRLLKDVLGVADVTEAWRVMILDDHATKVVSSIVGMYDITEASASAMVEDINKPRQPFKDMDAVYILDPCDQSVDKLKADFPNKKEALYKRVHLYFLEPVPDVVMESIRGCPELLRRVKSFKEINLDFVLSEVQTFHLGMGVEPGMPSLFRTLYGPGTGGSSVLSVAAQRLVTLCSTLREFPYVRYSGTSPRAEAVARDFQNKMNMFIAGASDWSFHGQDSTSERGRSTLLVMDRADDPLTPLMHDFTYQCLVQEVLPVTNGRIEMDSKNAAAAGQPPAKKEALLNEADELWVELRHEHVAKVLTELDRRFKEVLRDNSEAAALVKGGGRQMTLEQMANATRGLPEFQARCGHCEKPLTKKLSQHINMAQSCSTKISTMDLLNIGALEQTMALGTDELGKKRNRRDLLDGWTSDGEAKPGLLEILSAPRTLQELKMRLLAIFIITQKGITASEKEELYSAAQLSYTDRQVLANLGNLGVHTGEPDRDAIAGKTGGFSFGRKSTPKGSGEDEHEFSHMRYTCPAKPIIEKLILDELPIEDHPSVLPLPEGKAQRRDTSTSSSTAATGGKSARRQVKDRGAGSITVCMIRL 1830 MLSLCSSIAVFLCRVCRECVRQRLLKDVLGVADVTEAWRVMILDDHATKVVSSIVGMYDITEASASAMVEDINKPRQPFKDMDAVYILDPCDQSVDKLKADFPNKKEALYKRVHLYFLEPVPDVVMESIRGCPELLRRVKSFKEINLDFVLSEVQTFHLGMGVEPGMPSLFRTLYGPGTGGSSVLSVAAQRLVTLCSTLREFPYVRYSGTSPRAEAVARDFQNKMNMFIAGASDWSFHGQDSTSERGRSTLLVMDRADDPLTPLMHDFTYQCLVQEVLPVTNGRIEMDSKNAAAAGQPPAKKEALLNEADELWVELRHEHVAKVLTELDRRFKEVLRDNSEAAALVKGGGRQMTLEQMANATRGLPEFQARCGHCEKPLTKKLSQHINMAQSCSTKISTMDLLNIGALEQTMALGTDELGKKRNRRDLLDGWTSDGEAKPGLLEILSAPRTLQELKMRLLAIFIITQKGITASEKEELYSAAQLSYTDRQVLANLGNLGVHTGEPDRDAIAGKTGGFSFGRKSTPKGSGEDEHEFSHMRYTCPAKPIIEKLILDELPIEDHPSVLPLPEGKAQRRDTSTSSSTAATGGKSARRQVKDRGAGSITVCMIRL Sbjct: 1 MLSLCSSIAVFLCRVCRECVRQRLLKDVLGVADVTEAWRVMILDDHATKVVSSIVGMYDITEASASAMVEDINKPRQPFKDMDAVYILDPCDQSVDKLKADFPNKKEALYKRVHLYFLEPVPDVVMESIRGCPELLRRVKSFKEINLDFVLSEVQTFHLGMGVEPGMPSLFRTLYGPGTGGSSVLSVAAQRLVTLCSTLREFPYVRYSGTSPRAEAVARDFQNKMNMFIAGASDWSFHGQDSTSERGRSTLLVMDRADDPLTPLMHDFTYQCLVQEVLPVTNGRIEMDSKNAAAAGQPPAKKEALLNEADELWVELRHEHVAKVLTELDRRFKEVLRDNSEAAALVKGGGRQMTLEQMANATRGLPEFQARCGHCEKPLTKKLSQHINMAQSCSTKISTMDLLNIGALEQTMALGTDELGKKRNRRDLLDGWTSDGEAKPGLLEILSAPRTLQELKMRLLAIFIITQKGITASEKEELYSAAQLSYTDRQVLANLGNLGVHTGEPDRDAIAGKTGGFSFGRKSTPKGSGEDEHEFSHMRYTCPAKPIIEKLILDELPIEDHPSVLPLPEGKAQRRDTSTSSSTAATGGKSARRQVKDRGAGSITVCMIRL 610
BLAST of jgi.p|Trimin1|167786 vs. uniprot
Match: A0A6H5L5U1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5U1_9PHAE) HSP 1 Score: 484 bits (1245), Expect = 2.570e-159 Identity = 271/584 (46.40%), Postives = 383/584 (65.58%), Query Frame = 1 Query: 49 RECVRQRLLKDVLGV--------ADVTEAWRVMILDDHATKVVSSIVGMYDITEASASAMVEDINKPRQPFKDMDAVYILDPCDQSVDKLKADFPNKKEALYKRVHLYFLEPVPDVVMESIRGCPELLRRVKSFKEINLDFVLSEVQTFHLGMGVEPGMPSL-----FRTLYGPGTGGSS---VLSVAAQRLVTLCSTLREFPYVRYSGTSP-RAEAVARDFQNKMNMFIAGASDWSFHGQDS-TSERGRSTLLVMDRADDPLTPLMHDFTYQCLVQEVLPVTNGRIEMDSKNAAAAGQPPAKKEALLNEADELWVELRHEHVAKVLTELDRRFKEVLRDNSEAAALVKGGGRQMTLEQMANATRGLPEFQARCGHCEKPLTKKLSQHINMAQSCSTKISTMDLLNIGALEQTMALGTDELGKKRNRRDLLDGWTSDG-EAKPGLLEILSAPRTLQELKMRLLAIFIITQKGITASEKEELYSAAQLSYTDRQVLANLGNLGVHTGEPDRDAIAGKTGGFSFGRKSTPKGSG------------EDEHEFSHMRYTCPAKPIIEKLILDELPIEDHPSVLPLPE 1707 RE VRQ LL DV+ + ++AWRVM+LD AT+V+SS++GMYDI E + +VED++K RQPF++M+ VY++ P +SV+ +K DF + +ALY +VHL+FLE VP +++SI+ CP L+ R+K+FKEIN+DF++ E+Q++HL MG G + FR LYG G G +S V++ AQRLVTLC+TL EFP+VR++ R E VA FQ M ++ + W+F GQDS S+ GR+TLL++DRADDPL+PLMH+FTYQCLV+++L + +GR+ ++ G+ KKEALL ++D LW E RH+H+ KVLT+L RF++++ N+ AAALVKG GRQM++EQMA ATRGLPEFQ L+KK+SQH+ ++Q C K+ +LL GALEQTMALGTDELG+ R +D+L+GW +G + +PGLLEIL A RT +E+K+RL+ IF +TQ T+ EK + AAQL+ T L L L G + G GGFS S KG+ E+ ++F+HMRY P K + K++ L + PS+LP+P+ Sbjct: 119 RETVRQVLLSDVVRMDGGGKGARGAGSDAWRVMVLDARATRVISSVLGMYDIMEGHVT-VVEDLHKARQPFREMEGVYLVAPTAESVEAIKRDFSSPADALYSKVHLFFLERVPPDLLQSIKQCPTLVSRLKTFKEINMDFLVPEMQSYHLDMGSLSGAGEVEAAAHFRELYG-GRGQASAGRVMASIAQRLVTLCATLGEFPHVRFAADGGGRTEGVATTFQANMEELVSNSPTWTFRGQDSRASDGGRATLLLLDRADDPLSPLMHEFTYQCLVEDLLGIKDGRVTYTTET----GKGKQKKEALLTDSDALWAEFRHKHIGKVLTDLGNRFRDLVASNAGAAALVKGEGRQMSVEQMAKATRGLPEFQE--------LSKKMSQHVRLSQDCMDKLERKNLLQAGALEQTMALGTDELGRSRKCKDILEGWVIEGSDVQPGLLEILKASRTPEEMKLRLVGIFNVTQTKATSDEKARVVRAAQLASTSVPTLTGLERLAAAAG------VGGGVGGFSD-PSSAKKGNKLFKSLGFGASKQEETNDFTHMRYKTPLKETLAKMLSGTLSFDAFPSLLPMPQ 681
BLAST of jgi.p|Trimin1|167786 vs. uniprot
Match: A0A448YUW2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUW2_9STRA) HSP 1 Score: 341 bits (875), Expect = 2.060e-104 Identity = 218/564 (38.65%), Postives = 319/564 (56.56%), Query Frame = 1 Query: 52 ECVRQRLLKDVLGVADVTE-AWRVMILDDHATKVVSSIVGMYDITEASASAMVEDINKPRQPFKDMDAVYILDPCDQSVDKLKADFPNKKEALY-KRVHLYFLEPVPDVVMESIRGCPELLRRVKSFKEINLDFVLSEVQTFHLGMGVEPGMPSLFRTLYGPGTGGSSVLSVAAQRLVTLCSTLREFPYVRYSGTSPRAEAVARDFQNKMNMFIAGASDWSFHGQDS----TSERGRSTLLVMDRADDPLTPLMHDFTYQCLVQEVLPVTNGRI--EMDSKNAAAAGQPPAKKE---ALLNEADELWVELRHEHVAKVLTELDRRFKEVLRDNSEAAALVKGGGRQMTLEQMANATRGLPEFQARCGHCEKPLTKKLSQHINMAQSCSTKISTMDLLNIGALEQTMALGTDELGKKRNRRDLLDGWTSDGEAKPGLLEILSAPRTLQELKMRLLAIFIITQKGITASEKEELYSAAQLSYTDRQVLANLGNLGVHTGEPDRDAIAG-KTGGFSFGRKSTPKGSGED-EHEFSHMRYTCPAKPIIEKLILDELPIEDHPSVLPLP 1704 E V +R +DV A W+V+I+D+ KVVSS VGMYDI E S +VE + K R PFK M AVYI+ P S+ +L D+ +KK+ LY V LYFL PVP + ME ++ C +L++R+K+ EIN+DF++ E + F L M + SLF+ G G +V +AQ+LVTLC+TL E+PY+RY S +A F+ KM+ F+ W +HG + SER RSTLL++DR++D LTPLMHDF YQ +V ++L V +I + DSK + P KKE LLNE D+LWVELR +HVAKV+ L R E+ ++ A MTL Q+A+A + LPE+Q +T KL QH+++A C + LL + LEQT+A G DE + D + +D L+ I ++RL+ I II+Q G+T+ +KE L AAQL + Q L +L +G+ T + + + K GGF G ++ D ++E++ RYT P K I++ L+ ++L +++PSV+P+P Sbjct: 114 EMVHKRFTEDVFNTAAKAHPGWKVLIVDEPGMKVVSSAVGMYDIMEQQVS-VVESLEKKRAPFKHMGAVYIISPTQDSIRRLLEDYEDKKKVLYGDAVFLYFLAPVPKIWMEDLKQCKQLVKRLKAMAEINVDFLVREQRAFVLDM--KDPFVSLFQ-----GNGMKAVELKSAQKLVTLCATLNEYPYIRYKQNSNICSGIASIFKMKMDEFVGNNPGWWYHGSGNCPSRNSERDRSTLLLLDRSNDCLTPLMHDFNYQAMVNDLLHVEGDKITYKADSK------ENPKKKEEKDVLLNEKDKLWVELRGDHVAKVIEILTNRISEIQNSSTSMVARKDKKSSNMTLAQLASALKDLPEYQE--------VTAKLYQHMHLAHECMDEFKKAGLLELSDLEQTLATGKDEDDRNTKLSDTISRCEAD------LIRIREPTD-----RLRLVLIAIISQNGLTSGDKERLLRAAQLGRPELQTLESLRKIGIKTMNNNPGSSSNEKKGGFLGGLRNRSSSIDSDADNEYTSSRYTPPLKRILKDLVTNQLSTQEYPSVIPMP 644
BLAST of jgi.p|Trimin1|167786 vs. uniprot
Match: W7TX74_9STRA (Sec1-like family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TX74_9STRA) HSP 1 Score: 336 bits (861), Expect = 1.000e-103 Identity = 202/560 (36.07%), Postives = 317/560 (56.61%), Query Frame = 1 Query: 49 RECVRQRLLKDVL-GVADVTEAWRVMILDDHATKVVSSIVGMYDITEASASAMVEDINKPRQPFKDMDAVYILDPCDQSVDKLKADFPNKKEALYKRVHLYFLEPVPDVVMESIRGCPELLRRVKSFKEINLDFVLSEVQTFHLGMGVEPGMPSLFRTLYGPGTGGSSVLSVAAQRLVTLCSTLREFPYVRYSGTSPRAEAVARDFQNKMNMFIAGASDWSFHGQDSTSERGRSTLLVMDRADDPLTPLMHDFTYQCLVQEVLPVTNGRIEMDSKNAAAAGQPPAKKEALLNEADELWVELRHEHVAKVLTELDRRFKEVLRDNSEAAALVK-GGGRQMTLEQMANATRGLPEFQARCGHCEKPLTKKLSQHINMAQSCSTKISTMDLLNIGALEQTMALGTDELGKKRNRRDLLDGWTSDGEAKPGLLEILSAPRTLQELKMRLLAIFIITQKGITASEKEELYSAAQLSYTDRQVLANLGNLGVHTGEPDRDAIAGKTGGFSFGRKSTPKGSGEDE-HEFSHMRYTCPAKPIIEKLILDELPIEDHPSVLPLP--EGK 1713 RE V++RL++DV+ A ++ W VM++DD A +VVS++VGMYD+ E + ++E ++K RQP +MD +Y++ P SV+ + DF N K+ Y VHL+FL V D++M+ + P L+RV++FKEIN++F+ +E +FHL M +P LF+ ++V +LV LC L E+P+VR++ S +A Q+ +N F+A DW +HGQ ++R R+TLL++DRA+DPLTPL+H+ T+Q +V E LPV + + S+ + +ALLNE+D LWVE RH+H+AKV+ ++ R KE + N+ A K G +M+ +++ + LPE+ + +T KL + ++ + +L I LEQT+A G D G+ +L S +L L + E KMRL+AIFII Q+GIT ++ +L AA L+ D+ L +L LGV+ + + + +G KST D+ E+S RY CP K +IE+ + EL E +PS+LP+P EGK Sbjct: 18 REVVQRRLMQDVIEAAAGLSRGWMVMVIDDAALRVVSALVGMYDVMEHRVT-LIELLSKDRQPLPEMDVIYLVTPTPDSVNLILKDFANPKKPRYGAVHLFFLSKVNDMLMQRLAAVPNFLQRVRTFKEINMNFLATEAFSFHLDM--PESLPGLFKA-----RPDAAVQEEVVNKLVALCVALNEYPHVRFNQKSVLGARLASLVQDGLNDFVAAQEDWWYHGQTGHTDRERATLLILDRAEDPLTPLLHEHTFQPMVHEFLPVEDDMVTFQSEGKGGGHET----KALLNESDALWVEFRHQHIAKVMEQIGERTKEYIHANAGAELTQKLGTDAKMSAQELGLILKQLPEY--------REMTGKLWMYYSLTTDLMARFQREGILEISELEQTLATGVDSDGRSVKEDKMLQSLES-------MLMGLESTGLSLENKMRLIAIFIIAQEGITEVDRRQLVGAAGLTREDQDALIHLEALGVNVQKTKNHSSS------LWGSKSTKAKRRTDQASEYSASRYVCPLKDLIEQTVQGELSTEAYPSILPMPSQEGK 544
BLAST of jgi.p|Trimin1|167786 vs. uniprot
Match: A0A1Z5K703_FISSO (Syntaxin-binding protein 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K703_FISSO) HSP 1 Score: 330 bits (845), Expect = 7.030e-101 Identity = 211/586 (36.01%), Postives = 336/586 (57.34%), Query Frame = 1 Query: 49 RECVRQRLLKDV-LGVADVTEAWRVMILDDHATKVVSSIVGMYDITEASASAMVEDINKPRQPFKDMDAVYILDPCDQSVDKLKADFPNKKEALYKRVHLYFLEPVPDVVMESIRGCPELLRRVKSFKEINLDFVLSEVQTFHLGMGVEPGMPSLFRTLYGPGTGGSSVLSVAAQRLVTLCSTLREFPYVRYSGTSPRAEAVARDFQNKMNMFIAGASDWSFHG---QDSTSERGRSTLLVMDRADDPLTPLMHDFTYQCLVQEVLPVTNGRIEMDSKNAAAAGQPPAKKEALLNEADELWVELRHEHVAKVLTELDRRFKEVLRDNSEAAALVKGGGRQMTLEQMANATRGLPEFQARCGHCEKPLTKKLSQHINMAQSCSTKISTMDLLNIGALEQTMALGTDELGKKRNRRDLLDGWTSDGEAKPGLLEILSAPRTLQELKMRLLAIFIITQKGITASEKEELYSAAQLSYTDRQVLANLGNLGVHTGEPDRDAIAGKTGGFS--FGRKSTPKGSGEDEHEFSHMRYTCPAKPIIEKLILDELPIEDHPSVLPLPEGKAQRRDTSTSSSTAAT--GGKSARRQ 1782 R V++R+L+DV + ++ W+V+ILDD + +V+SS VGMYDI E + +VE +NK R PF DM AVY+L+P S+ KL DF K V LYFL +PD +++ I+GC +LL+R+K+ EIN+DF+ E + F M F + Y + V +A RLVT+C TL E+P++RY +S + ++A F KM+ F+A +W +HG + + + + R TLL++DRADD LTPLMHDF YQ +V+++LP+ RI ++ + K+ LL+E D+LWVE+R H+A+V+ L R +E++ ++ +A K G MTL QMA A + LPE+ K + KL+QH+++A C + L+++ LEQT+A GTDE G DL+D +++ + +++ ++RL+ I I+Q G+ ++ L +AA+L+ D + L +L LG+ + A K GG + FGR S+ +GED+ E++ RY K ++E L L +E++PSV+P+PE A +++ AAT G +SAR++ Sbjct: 28 RSLVQERILEDVFVSASNKYPGWKVLILDDLSMRVISSAVGMYDIMERKIT-IVESLNKKRAPFPDMGAVYVLEPSSDSISKLLQDFEKGKVLYGNAVFLYFLGRLPDNLLDQIKGCKQLLKRLKALSEINIDFLAKEERAFSFDMR------DCFGSFYLRKAANAEVRKIA-DRLVTVCGTLNEYPHIRYKQSSTMSSSLAHIFHRKMDDFVAQNPNWWYHGGPKKGAGAAKERGTLLLLDRADDALTPLMHDFYYQSMVRDLLPMDGDRITFKDESVDDPNKTE-DKDVLLDEKDKLWVEIRGFHIAQVIHTLSERIREMVNSSAGSAFGGKSKG-DMTLAQMAAAMKALPEY--------KEVMSKLTQHMHIAHECMDALKKDKLMDLANLEQTLATGTDEDGNAPKLPDLIDAAE----------DLIMNMKNVKD-RLRLILIITISQGGLRQQDRRRLMNAAELTRKDMRTLNSLEVLGLSLFA----SPAEKKGGLASLFGRGSS---AGEDDEEYAATRYKPRIKAVLESLANGTLSLEEYPSVMPMPESAAAASKRGSTARGAATRRGVESARKK 577
BLAST of jgi.p|Trimin1|167786 vs. uniprot
Match: A0A7S4AKE7_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AKE7_9STRA) HSP 1 Score: 331 bits (849), Expect = 1.780e-100 Identity = 212/563 (37.66%), Postives = 323/563 (57.37%), Query Frame = 1 Query: 52 ECVRQRLLKDVLG-VADVTEAWRVMILDDHATKVVSSIVGMYDITEASASAMVEDINKPRQPFKDMDAVYILDPCDQSVDKLKADFPNKKEALY-KRVHLYFLEPVPDVVMESIRGCPELLRRVKSFKEINLDFVLSEVQTFHLGMGVEPGMPSLFRTLYGPGTGGSSVLSVAAQRLVTLCSTLREFPYVRYSGTSPRAEAVARDFQNKMNMFIAGASDWSFHGQDS----TSERGRSTLLVMDRADDPLTPLMHDFTYQCLVQEVLPVTNGRIEMDSKNAAAAGQPPAK--KEALLNEADELWVELRHEHVAKVLTELDRRFKEVLRDNSEAAALVKGGGRQMTLEQMANATRGLPEFQARCGHCEKPLTKKLSQHINMAQSCSTKISTMDLLNIGALEQTMALGTDELGKKRNRRDLLDGWTSDGEAKPGLLEILSAPRTLQELKMRLLAIFIITQKGITASEKEELYSAAQLSYTDRQVLANLGNLGVHT-GEPDRDAIAG--KTGGFSFG-RKSTPKGSGEDEHEFSHMRYTCPAKPIIEKLILDELPIEDHPSVLPLP 1704 E V +R +DV A W+V+I+D+ A KVVS+ VGMYDI E S +VE + K R PFKDM A+YIL P S+ +L D+ +K LY V LYFL V +M+ ++ C +L++R+K+ EIN+DF++ E + F L M +P S FR G+G SV A++LVTLC+TL E+PY+RY S +A F+ KM+ F++ W + G + +ER RSTLL++DR+ D LTPL+HDF YQ +V ++L + +I + A P K K+ LLNE D+LWVE+R +HVAKV+ L R +EV+ + + ++V + M+L Q+A+A + LPE+ + +T KL+QH+++A C K + L ++G LEQT+A G DE + + +D + LL L +P+ ++RL+ I II+Q G+T KE L AA+ + VL +L ++G+ + + AI K GGF G R T E+E+E++ RY P K I++ L+ ++L I+D+PSV+P+P Sbjct: 121 EIVHKRFTEDVFNSAAKAHPGWKVLIVDEPAMKVVSAAVGMYDIMEQQVS-IVESLEKVRAPFKDMAAIYILSPTQDSIKRLLDDYSDKTTVLYGNAVFLYFLGSVSQEMMQQLKQCKQLIKRLKAMAEINVDFLIQEQRAFILDMN-DP-FASFFR-----GSGRKSVELKTAEKLVTLCATLFEYPYIRYKQDSKVCSRIASIFKKKMDQFVSANPSWWYQGSGNCPTRNAERDRSTLLLLDRSSDCLTPLLHDFNYQAMVNDLLDIKGDKI---TYKADVPDNPKKKEDKDVLLNEKDKLWVEMRGDHVAKVIEVLTERIQEVM---NSSTSMVARKDKNMSLAQLASAMKDLPEY--------REVTSKLNQHMHIAHGCMDKFTKAGLYDLGDLEQTLATGKDEDDEYTKLSETID------RCEDTLLN-LKSPKD----RLRLVLIAIISQGGLTTENKESLLQAAKFGRKELAVLDSLIHIGIQSVNDNPSPAITKEPKKGGFLGGFRSRTASQDSEEENEYTSSRYVPPLKKILKDLVTNQLSIDDYPSVIPMP 650
BLAST of jgi.p|Trimin1|167786 vs. uniprot
Match: K0QZ50_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZ50_THAOC) HSP 1 Score: 315 bits (807), Expect = 2.720e-95 Identity = 193/573 (33.68%), Postives = 324/573 (56.54%), Query Frame = 1 Query: 49 RECVRQRLLKDVLGVADVTEA--WRVMILDDHATKVVSSIVGMYDITEASASAMVEDINKPRQPFKDMDAVYILDPCDQSVDKLKADFP----NKKEALY-KRVHLYFLEPVPDVVMESIRGCPELLRRVKSFKEINLDFVLSEVQTFHLGMGVEPGMPSLFRTLY--GPGTGGSSVLSVAAQRLVTLCSTLREFPYVRYSGTSPRAEAVARDFQNKMNMFIAGASDWSFHGQDSTSERGRSTLLVMDRADDPLTPLMHDFTYQCLVQEVLPVTNGRIEMDSKNAAAA----GQPPAKKEALLNEADELWVELRHEHVAKVLTELDRRFKEVLRDNSEAAALV--KGGGRQMTLEQMANATRGLPEFQARCGHCEKPLTKKLSQHINMAQSCSTKISTMDLLNIGALEQTMALGTDELGKKRNRRDLLDGWTSDGEAKPGLLEILSAPRTLQELKMRLLAIFIITQKGITA-SEKEELYSAAQLSYTDRQVLANLGNLGVHTGEPD-RDAIAGKTGGFSFGRKSTPKGSGEDEHEFSHMRYTCPAKPIIEKLILDELPIEDHPSVLPLPEGKA 1716 R+ V+ LL DV + V W V+++D A +V+SS +GMY++ E + + +VED+ K R PF+D +Y+++P S+D++ D+ NKK LY V LYFL P+PD + I+ C EL++RVK +E+N+DF+ E FH M P +++ LY TG S + +LVT+C+TL E+P+VR+ + +++A FQ K+N F+ W F+G + RSTLL++DR DD L+PL+H+ TY+ +V ++LP+ + +I DS A + G+ + +ALLN+ DE+WVEL+ +H+A+V+ L + ++++ ++S +AL K G+ +++ QMA A + LPE+ + + KLSQH+ +A C + LL + LEQT+A G + G+ + LL G + R +++R+LAI I++Q+G+++ S+ ++L + A LS + L NL LG + D +++ + GG +K++ E+E E+S RY CP K I++ L +E++PSV+PLP+ A Sbjct: 26 RDIVKSHLLDDVFQKSSVKNGNQWMVLVVDPEALRVISSSIGMYNLMEHNVT-IVEDLMKRRAPFRDQAVLYLVEPNRSSIDRIVNDWTPSKENKKGPLYGNSVFLYFLGPLPDELFGLIKQCKELVKRVKVLQEVNVDFLTKESGAFHFDMK-PPRFQNIYSELYVRRSSTGLSPLHDRMMSKLVTVCATLNEYPHVRFPSNNELCKSLANLFQQKINEFLGSNKSWWFNGDGTNPNTERSTLLILDRKDDCLSPLVHELTYEAMVNDLLPIDDEKITYDSVTAGTSKEGTGETTTRMDALLNDNDEVWVELKGKHIAEVIQTLSTKIRDIV-NSSTGSALSGSKASGKALSINQMAKALKALPEY--------REIMSKLSQHMQIAHQCMDAFNKQGLLELTELEQTLATGKTDEGRTPKLKALL-----------GQVVEEFRKRNDSAMRLRILAIAIVSQRGLSSQSDLKKLLNEANLSEDEISALRNLEKLGCPLVQKDGQNSKYARIGG----KKASSFSEAENESEYSSSRYACPLKSILQDATSGNLSVEEYPSVMPLPDDNA 572
BLAST of jgi.p|Trimin1|167786 vs. uniprot
Match: B8C595_THAPS (Syntaxin-interacting protein unc-18 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C595_THAPS) HSP 1 Score: 311 bits (797), Expect = 2.320e-94 Identity = 188/553 (34.00%), Postives = 310/553 (56.06%), Query Frame = 1 Query: 118 VMILDDHATKVVSSIVGMYDITEASASAMVEDINKPRQPFKDMDAVYILDPCDQSVDKLKADFP----NKKEALYKRV-HLYFLEPVPDVVMESIRGCPELLRRVKSFKEINLDFVLSEVQTFHLGMGVEPGMPSLFRTLYGPGTGGSSVLSVAAQ-RLVTLCSTLREFPYVRYSGTSPRAEAVARDFQNKMNMFIAGASDWSFHGQDSTSERGRSTLLVMDRADDPLTPLMHDFTYQCLVQEVLPVTNGRIEMDSKNAAAAGQPPA----KKEALLNEADELWVELRHEHVAKVLTELDRRFKEVLRDNSEAAALVKGGGRQ-MTLEQMANATRGLPEFQARCGHCEKPLTKKLSQHINMAQSCSTKISTMDLLNIGALEQTMALGTDELGKKRNRRDLLDGWTSDGEAKPGLLEILSAPRTLQELKMRLLAIFIITQKGITA-SEKEELYSAAQLSYTDRQVLANLGNLGVHTGEPDRDAIAGKTGGFSFGRKSTPKGSGEDEHEFSHMRYTCPAKPIIEKLILDELPIEDHPSVLPLPEGKAQRRDTSTS 1740 V+++D + +V+SS +GMY++ E S +VED+ K R PF+D +Y ++P ++S++++ D+ +KK LY V LYFL +PD + I+GC EL++RVK KE+NLDF+ E FH M S++ LY ++ L+ +LVT+C+TL E+P+VR+ + + +A FQ KMN F+ +W ++G R+TLL++DR DD L+PLMH+FTY+ +V ++LP+ + RI DS NA A + A K +ALLN+ DE+WVELR +H+A V+ L + +E++ +S +A ++ +++ QMA A + LPE+ + + KLSQH+ +A C + LL + LEQT+A G + G+ + LL + +P L +++RLLAI I++Q+G+++ S+ ++L + A LS + L NL +G + D + K + + G E E E+S RY C K I+E+ +L +E++PSV+PLP+ +A T++S Sbjct: 2 VLVVDPESLRVISSSIGMYNLMEHHVS-IVEDLTKGRAPFRDQAVLYFVEPTEESLNRIIEDWTPKKGSKKGPLYGDVVFLYFLGRLPDELFAKIKGCKELVKRVKVLKEVNLDFLTKEADAFHFDMKDA----SIYSELYLSDPRSTTALNERMMSKLVTVCATLNEYPHVRFPAKNALCKNLAFVFQQKMNEFVGSNREWWYNGDGIHPNSERATLLILDRKDDCLSPLMHEFTYEAMVNDLLPIDDDRITYDSVNAGTAKEGSAEATTKMDALLNDNDEVWVELRGKHIADVIQTLSAKIREIVNSSSGSAFNSSSKSKKSLSISQMAKALKALPEY--------REIMSKLSQHMQIAHQCMDAFNAQGLLGLSDLEQTLATGKTDEGRTPKLKHLLGQVVEEFRKQPNSL-----------MRLRLLAIVIVSQRGLSSDSDLQKLLNEANLSGKELGALQNLEKMGCPLVQRKADGKSAKLVSYLKSKGVNSFGQSESESEYSSSRYVCLLKSIMEEATSGKLSVEEYPSVMPLPDAEAMLAPTASS 530
BLAST of jgi.p|Trimin1|167786 vs. uniprot
Match: A0A7S1BZR1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BZR1_9STRA) HSP 1 Score: 316 bits (809), Expect = 2.380e-94 Identity = 209/613 (34.09%), Postives = 327/613 (53.34%), Query Frame = 1 Query: 49 RECVRQRLLKDVLGVADV---TEAWRVMILDDHATKVVSSIVGMYDITEASASAMVEDINKPRQPFKDMDAVYILDPCDQSVDKLKADF--PNKKEALYKRVHLYFLEPVPDVVMESIRGCPELLRRVKSFKEINLDFVLSEVQTFHLGMGVEPGMPSLFRTLYGPG----------TGGSSVLSVA----AQRLVTLCSTLREFPYVRYSGTSPRAEA------VARDFQNKMNMFIAGASDWSFHGQDSTSERGRSTLLVMDRADDPLTPLMHDFTYQCLVQEVLPVTNGRIEMDSKNAAAAGQPPAKKEALLNEADELWVELRHEHVAKVLTELDRRFKEVLRDNSEAAALVKGGGRQMTLEQMANATRGLPEFQARCGHCEKPLTKKLSQHINMAQSCSTKISTMDLLNIGALEQTMALGTDELGKKRNRRDLLDGWTSDGEAKPGLLEILSAPRTLQELK-MRLLAIFIITQKGITASEKEELYSAAQLSYTDRQVLANLGNLGVHTGEPDRDAIAGKTGGFSFGRKSTPKGSGEDEHEFSHMRYTCPAKPIIEKLILDELPIEDHPSVLPLPEGKAQRRDTSTSSSTAATGGKSARRQVKDRGAGSI 1809 +E V RLL V+ E+W V+I DD A +++S++ GMYDI E + +VE ++K R PF+DM A+Y++ P ++SVD++ ADF P A Y+ V L FL VPD ++ I+ C LL ++K F EIN+DF+ +E F P+ F +Y G S+ LS RLV++C+TL E+P++RY +++ +A F+++++ F+A +W +HG SER R LL+++RA+DPL+PL+H+FTY+ +V ++L + + A + +E LLN+ DE WVE R H+A+V L R KE L +NS AAL + G+ M+L QM+ A + LPE+ + + KLSQHI+++ C + +L I +EQTM G E G K ++D+L L E+L+ R + +L +RL++I+I++Q GI A +KEEL+ A LS T R +AN LGV ++ + F + KG + E++ RY C K ++E+L+ + L E +PS+LP+P G SS AA +SAR + + G I Sbjct: 153 KELVCDRLLTGVIEACYAKCPVESWMVLICDDPALRIISAVAGMYDIMERKVT-LVEGLSKRRAPFRDMAAIYLVRPTEESVDRIIADFEQPIGGTAPYRSVFLSFLSRVPDELVAKIKKCKPLLAKIKGFGEINVDFLATEATAFSFDE------PTFFHRIYSQNGSQRSPRPNQLGFSAPLSPVHVEIVDRLVSVCATLNEYPHIRYKADDIKSQRTGICPKIALLFKDRLDQFVASNPEWWYHGGPGHSERDRGVLLIVERAEDPLSPLVHEFTYRAMVHDLLEMAGEKYTYTPTTQKNASE----REVLLNDNDECWVEFRDNHIAEVTEMLSGRTKEYLSNNS-GAALARNAGKNMSLGQMSEALKQLPEY--------REIISKLSQHIHISSQCMDEFKKQNLKGIAEVEQTMVTGERENGNKV-KKDVL------------LKELLAELRKVDQLMALRLISIYIVSQGGILAKDKEELFRVAGLSKTQRNAVANFELLGVKLERQEKKKLE-----RLFSSRVIAKGRNDMNSEYAISRYKCYLKEVMEELVNNTLSFEKYPSILPMPVG---------GSSGAAASARSARTRHANHSTGPI 718
BLAST of jgi.p|Trimin1|167786 vs. uniprot
Match: A0A1E7FLM4_9STRA (Sec1-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FLM4_9STRA) HSP 1 Score: 311 bits (796), Expect = 6.350e-93 Identity = 209/598 (34.95%), Postives = 332/598 (55.52%), Query Frame = 1 Query: 52 ECVRQRLLKDVL-GVADVTEAWRVMILDDHATKVVSSIVGMYDITEASASAMVEDINKPRQPFKDMDAVYILDPCDQSVDKLKADFPNKKEALY-KRVHLYFLEPVPDVVMESIRGCPELLRRVKSFKEINLDFVLSEVQTFHLGMGVEPGMPSLFRTLYGPGTGGSSVLSVAAQRLVTLCSTLREFPYVRYSGTSPRAEAVARDFQNKMNMFIAGASDWSFHGQDS----TSERGRSTLLVMDRADDPLTPLMHDFTYQCLVQEVLPVTNGRIEMDSKNAAAAGQPPAK--KEALLNEADELWVELRHEHVAKVLTELDRRFKEVLRDNSEAAALVKGGGRQMTLEQMANATRGLPEFQARCGHCEKPLTKKLSQHINMAQSCSTKISTMDLLNIGALEQTMALGTDELGKKRNRRDLLDGWTSDGEAKPGLLEILSAPRTLQELKMRLLAIFIITQKGITASEKEELYSAAQLSYTDRQVLANLGNLGVHT-GEPDRDAIAGKTGGFSF-GRKSTPKGSGEDEH--EFSHMRYTCPAKPIIEKLILDELPIEDHPSVLPLPEGKAQRRD--TSTSSSTAATGGKSARRQVKDRGAG 1803 E VR+R DV A+ W+V+I+D+ KV+S+ VGMYDI E S +VE + + R PFKDM A+YIL P ++SV KL D+ +K + LY V LYFL P+P +M I+ C +L++R+K+ E+N+DF++ E ++F L M +P SL R G G S A++LVTLC+TL E+PY+R+ S ++A F+ KM+ ++ W +HG + SER RSTLL++DR+ D LTPLMHDFTYQ +V ++L + +I + A + P K K+ LLN+ D+LWVE+R H+A+V+ L R ++V+ ++S +AL K G M+L Q+A+A + LPE+ + + KL QH+++A C K + + LL++ +EQT+A G D+ + + + + L+ I + ++RL+ I I+Q G++ +K+ L AAQL + Q L +L + + + A K G F GR S E++ RY P K I++ L+ ++L +++PSV+P+P A TS++ S+ GG S + K + +G Sbjct: 105 EVVRKRFTDDVFQSAANAHPGWKVLIVDEPGMKVISAAVGMYDIMEQQVS-IVESLERKRAPFKDMAAIYILAPTNESVQKLLDDYADKTKILYGPAVFLYFLGPIPKQLMHQIKQCKQLVKRLKAVAEVNVDFLMREQRSFVLDMN-DP-FASLIR-----GGGMSPTEMKMAEKLVTLCATLNEYPYIRFKQKSKVCSSLADLFKMKMDEYVGSNPAWWYHGSGNCPAKNSERDRSTLLLLDRSSDCLTPLMHDFTYQSMVNDLLTIEGDKI---TYKAESQENPSIKEDKDVLLNDKDKLWVEMRGNHIAQVIEVLSGRIQDVV-NSSTNSALRKKSGSNMSLSQLASAMKELPEY--------REVMSKLGQHMHIAHDCMDKFNKLGLLDLSDVEQTLATGKDDDDRTVKTAETIS------RCESALIRIQDP-----DDRLRLMLIATISQGGLSRGDKDRLLRAAQLGRKELQTLESLSKIAMDSINNNAASPTAAKDGKKGFLGRSSXXXXXXXXXXXSEYASSRYVPPLKGILKALVSNQLDFQEYPSVIPMPASSASSSVGVTSSARSSRKKGGASTDKWGKSKSSG 671 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167786 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8190 ID=mRNA_8190|Name=jgi.p|Trimin1|167786|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1833bp|location=Sequence derived from alignment at Contig_53:486327..495143- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTGAGTTTGTGTTCTTCTATTGCTGTTTTTTTGTGTCGTGTCTGCAGback to top protein sequence of jgi.p|Trimin1|167786 >Trimin1|167786|e_gw1.53.84.1 ID=Trimin1|167786|e_gw1.53.84.1|Name=jgi.p|Trimin1|167786|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=611bp MLSLCSSIAVFLCRVCRECVRQRLLKDVLGVADVTEAWRVMILDDHATKVback to top mRNA from alignment at Contig_53:486327..495143- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8190 ID=mRNA_8190|Name=jgi.p|Trimin1|167786|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8817bp|location=Sequence derived from alignment at Contig_53:486327..495143- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_53:486327..495143- >mRNA_8190 ID=mRNA_8190|Name=jgi.p|Trimin1|167786|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1833bp|location=Sequence derived from alignment at Contig_53:486327..495143- (Tribonema minus UTEX_B_3156 )back to top |