mRNA_814 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157114 vs. uniprot
Match: A0A835Z442_9STRA (Glycosyl transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z442_9STRA) HSP 1 Score: 585 bits (1507), Expect = 1.820e-211 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 1 Query: 1 MIYLIDVVSYNGEPVLEARLEYLSERVDELVIVESKCTHSGTPKPCYFGEKFSDILQKFPNITYLQIDSFPPLIPDVWMKKHAADAYMRGGLGAWFRENYQRDFALPYIQKKYAGKQYIVMCSDVDEIPSLDVVNTLKANYASLSTPIYFHQRFYMYNLNWETDEFWSKAFVINDTGLTPEHSLSDIRTAPPKRVFPSAGWHLSFCLAKHDLIRKIQSFAHTEFNKDKFTSEAHVEKCLANGSDIFSRQHVRITRTATTDDLPEPIKKFHEKIMFAQRY 837 MIYLIDVVSYNGEPVLEARLEYLSERVDELVIVESKCTHSGTPKPCYFGEKFSDILQKFPNITYLQIDSFPPLIPDVWMKKHAADAYMRGGLGAWFRENYQRDFALPYIQKKYAGKQYIVMCSDVDEIPSLDVVNTLKANYASLSTPIYFHQRFYMYNLNWETDEFWSKAFVINDTGLTPEHSLSDIRTAPPKRVFPSAGWHLSFCLAKHDLIRKIQSFAHTEFNKDKFTSEAHVEKCLANGSDIFSRQHVRITRTATTDDLPEPIKKFHEKIMFAQRY Sbjct: 1 MIYLIDVVSYNGEPVLEARLEYLSERVDELVIVESKCTHSGTPKPCYFGEKFSDILQKFPNITYLQIDSFPPLIPDVWMKKHAADAYMRGGLGAWFRENYQRDFALPYIQKKYAGKQYIVMCSDVDEIPSLDVVNTLKANYASLSTPIYFHQRFYMYNLNWETDEFWSKAFVINDTGLTPEHSLSDIRTAPPKRVFPSAGWHLSFCLAKHDLIRKIQSFAHTEFNKDKFTSEAHVEKCLANGSDIFSRQHVRITRTATTDDLPEPIKKFHEKIMFAQRY 279
BLAST of jgi.p|Trimin1|157114 vs. uniprot
Match: A0A835Z6R3_9STRA (Glycosyl transferase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6R3_9STRA) HSP 1 Score: 245 bits (625), Expect = 2.230e-77 Identity = 124/279 (44.44%), Postives = 177/279 (63.44%), Query Frame = 1 Query: 10 LIDVVSYNGEPVLEARLEYLSERVDELVIVESKCTHSGTPKPCYFGEKFSDILQKFPNITYLQIDSFPPLIPDVWMKKHA-ADAYMRGG-LGAWFRENYQRDFALPYIQKKYAGKQYIVMCSDVDEIPSLDVVNTLKAN-YASLSTPIYFHQRFYMYNLNWETDEFWSKAFVINDTGLTPEHSLSDIRTAPPKRVFPSAGWHLSFCLAKHDLIRKIQSFAHTEFNKDKFTSEAHVEKCLANGSDIFSRQHVRITRTATTDDLPEPIKKFHEKIMFAQRY 837 LIDV +NGEP+LE RLEYL + VDE V+VESK T SG K ++ D L + P +T L++D PP+ + W ++ + + ++M G + WFRE +QRD+ YI KYA + YIV+CSDVDEIP +++ +LK + L TPIY H MYN+ W+TDE W +AFVIN G S+ ++R A P RV P+ GWH S+ L DL RKIQ+F+H E+NK ++T AH ++CL +G D+ R ++ A T +PE KF+EK++F Q++ Sbjct: 3 LIDVFCFNGEPILELRLEYLQDVVDEFVLVESKYTFSGKVKDTFY----CDDLVQHPKVTVLRLDYAPPVADEEWCRERSGSSSFMEEGCMDHWFREQHQRDYPKSYIVNKYADEDYIVVCSDVDEIPRKELLVSLKQHGNGQLHTPIYLHMAMLMYNMGWQTDEQWLRAFVINKEGFCNAASVDEMRRAEPYRVAPNGGWHCSYFLNSRDLARKIQAFSHQEYNKPEYTDTAHCQRCLLSGKDVLGRGELK----AYTGQVPELFIKFNEKMLFLQKF 273
BLAST of jgi.p|Trimin1|157114 vs. uniprot
Match: A0A835ZIL3_9STRA (Glycosyltransferase family 17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIL3_9STRA) HSP 1 Score: 197 bits (500), Expect = 1.930e-57 Identity = 97/235 (41.28%), Postives = 137/235 (58.30%), Query Frame = 1 Query: 145 GEKFSDILQKFPNITYLQIDSFPPLIPDVWMKKHAADA---YMRGGLGAWFRENYQRDFALPYIQKKYAGKQYIVMCSDVDEIPSLDVVNTLKAN-YASLSTPIYFHQRFYMYNLNWETDEFWSKAFVINDTGLTPEHSLSDIRTAPPKRVFPSAGWHLSFCLAKHDLIRKIQSFAHTEFNKDKFTSEAHVEKCLANGSDIFSRQHVRITRTATTDDLPEPIKKFHEKIMFAQRY 837 G S+ L P +T L+++ P + W + A A YM G + W+RE +QRD YI+ KYA ++YIV+CSDVDEIP + + +LK + Y L PI+ H + MYN+ W+TDE W +AFVIN S+ ++R A P RV P+ GWH S L+ L RK+QSF+H EFNK ++T AHV KCL+ G D+ R ++PE + FH+K++F QRY Sbjct: 131 GCLLSEALPVHPKLTVLKLEDAPAVADHKWTLQRRASASSSYMEGSMDHWYREKHQRDHPHSYIKNKYASREYIVVCSDVDEIPRKEFLISLKQHCYGQLRDPIHLHMKMLMYNMKWQTDEQWMRAFVINKVSFCAATSIDELRRADPGRVAPNGGWHCSSFLSTAQLTRKLQSFSHQEFNKPEYTDAAHVRKCLSEGKDVLKRGG---DLRKYAGEVPEVFRSFHKKMLFLQRY 362
BLAST of jgi.p|Trimin1|157114 vs. uniprot
Match: A0A6C0DQX5_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DQX5_9ZZZZ) HSP 1 Score: 147 bits (372), Expect = 1.720e-39 Identity = 92/281 (32.74%), Postives = 139/281 (49.47%), Query Frame = 1 Query: 1 MIYLIDVVSYNGEPVLEARLEYLSERVDELVIVESKCTHSGTPKPCYFGEKFSDILQKFPNITYLQIDSFPPLIPDVWMKKHAADAYMRGGLGAWFRENYQRDFALPYIQKKYAGKQYIVMCSDVDEIPSLDVVNTLKAN-YASLSTPI-YFHQRFYMYNLNWETDEFWSKAFVINDTGLTPEHSLSDIRTAPPKRVFPSA-GWHLSFCLAKHDLIRKIQSFAHTEFNKDKFTSEAHVEKCLANGSDIFSRQHVRITRTATTDDLPEPIKKFHEKIM-FAQ 831 M+ ID + +NGEP+++ RL Y+ + VD I ES+ TH G K F E + + + I P +G +W EN QR++A+P I AGK+YIV D DEIP + VV K Y + S+ + Y Q+ + YN NW + W++AF +N+ L + R P + GWHLS+ ++K D++RKI SFAHTE+N K + A++E C+ G D+F R + LPE +K ++ FA+ Sbjct: 1 MVRWIDSILFNGEPIIQLRLSYMYKTVDTFYICESRYTHQGKRKDVLFTESLKAWFEPYMDKIVFVIQEEVP----------------KGS--SWDIENSQRNYAVPKILSDNAGKEYIVSVCDCDEIPDISVVKEYKERLYETTSSGVCYMIQKLFYYNFNWYVVD-WNRAFFMNNVLLEKTREVQIFRNRIPTQFTEFVCGWHLSYFMSKEDILRKIVSFAHTEYNLPKHKNIAYIESCIEKGYDVFQRHEI-----CRFQHLPEFVKSLPKEFQTFAE 257
BLAST of jgi.p|Trimin1|157114 vs. uniprot
Match: A0A3G5AHS7_9VIRU (Uncharacterized protein n=1 Tax=Sylvanvirus sp. TaxID=2487774 RepID=A0A3G5AHS7_9VIRU) HSP 1 Score: 144 bits (364), Expect = 2.600e-35 Identity = 97/274 (35.40%), Postives = 138/274 (50.36%), Query Frame = 1 Query: 4 IYLIDVVSYNGEPVLEARLEYLSERVDELVIVESKCTHSGTPKPCYFGEKFSDILQKFPN-ITYLQIDSFPPL------IPDVWMKK---HAADAYMRGGLGAWFRENYQRDFALPYIQKKYAG----KQYIVMCSDVDEIPSLDVVNTLKAN---YASL-STP---IYFHQRFYMYNLNWETDEFWSKAFVINDTGLTPEHSLSDIR------TAPPKRVFPSAGWHLSFCLAKHDLIRKIQSFAHTEFNKDKFTSEAHVEKCLANGSDIFSR 744 I L D V YNGEP++E RL+ L VD+ I E++ T SG KP + EK + +++ N I +L I+ FP + + + K H D + +WFRENYQRD+ +Q+K ++ + DVDEIP ++ LK Y L TP +Y FY YN NW+ W F T + S SD R R ++GWHLS+ + K DL+RKI SFAH EF++D+F S + ++ CL G D+F R Sbjct: 440 IALFDCVPYNGEPIVEERLKQLYPYVDKFYITEARYTFSGIRKPELYVEKNRHVFERYMNKIEFLVIEQFPDIETSERNMIETRAKMNQIHCVD------IESWFRENYQRDYVQQILQQKQQEGLICDPFVCVVCDVDEIPRAAILQDLKKPEYYYDRLCKTPRQTLYLQMDFYYYNWNWKKKSPWMHPFCTT----TIQESFSDKRWNAHFHARSLDRTILNSGWHLSYFMPKEDLVRKITSFAHREFDQDQFKSSSWLDVCLCAGKDLFGR 703
BLAST of jgi.p|Trimin1|157114 vs. uniprot
Match: UPI001BC3C213 (Uncharacterized protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=UPI001BC3C213) HSP 1 Score: 112 bits (279), Expect = 1.380e-25 Identity = 82/243 (33.74%), Postives = 119/243 (48.97%), Query Frame = 1 Query: 28 YNGEPVLEARLEYLSERVDELVIVESKCTHSGTPKPCYFGEKFSDILQKFPNITYLQID-SFPPLIPDVWMKKHAADAYMRGGLGAWFRENYQRDFALPYIQKKYAGKQYIVMCSDVDEIPSLDVVNTLKANYASLSTPIYFHQRFYMYNLNWETDEFWSKAFVINDTGLTPE---HSLSDIRTAPPKRVFPSAGWHLSFCLAKHDLIRKIQSFAHTEFNKDKFTSEAHVEKCLANGSDIFSR 744 +N +LE RL+ L + VD VI ES TH+G PKP YF E S I YL + S L + + K+ + AW EN QR+ AL I + A +++ SD+DEIP V+ + ++LS + FH +Y N DE W ++ E +L D R P+ AGWH S+ + +KIQSFAHTEFNK+++ + ++ K + G DIF+R Sbjct: 10 FNELDLLEFRLKLLHDVVDHFVIAESNLTHAGKPKPYYFEEAKSRFAPWQQKIIYLPVQQSTEGLDFNTTITKYTPTS------AAWQLENGQRN-ALQQINSQLADDDKVLL-SDLDEIPDPGVLKRTTISTSALSLSMIFH--YYFLNCQNVGDEHWWNGSIVCSGKQFKELGPQTLRDNRNNYPR--VKKAGWHFSYLGGVEKIKQKIQSFAHTEFNKEEYLQDENIIKAMLEGKDIFNR 240
BLAST of jgi.p|Trimin1|157114 vs. uniprot
Match: A0A1W6BBV6_9PROT (Uncharacterized protein n=1 Tax=Candidatus Pelagibacter sp. RS39 TaxID=1977864 RepID=A0A1W6BBV6_9PROT) HSP 1 Score: 109 bits (272), Expect = 8.340e-25 Identity = 79/261 (30.27%), Postives = 126/261 (48.28%), Query Frame = 1 Query: 10 LIDVVSYNGEP-VLEARLEYLSERVDELVIVESKCTHSGTPKPCY-FG-EKFSDILQKFPNITYLQIDSFPPLIPDVWMKKHAADAYMRGGLGAWFRENYQRDFALPYIQKKYAGKQYIVMCSDVDEIPSLDVVNTL---KANYASLSTPIYFHQRFYMYNL---NWETDEFWSKAFVINDTGLT-------PEHSLSDIRTAPPKRVFPSAGWHLSFCLAKHDLIRKIQSFAHTEFNKDKFTSEAHVEKCLANGSDIFSR 744 +ID YN E +LE RL L + +D+ VI+E++ HSG K Y F E F +K I YL+++ FP G W RENY R++ L ++ + + YI++ SD+DEIP+L+ +N + K Y + + ++ +F + N NW + ++ N L P + L I+ + GWH SF + D+ +KI+SFAH+EFNK KFT + + + + D+F R Sbjct: 3 IIDCFLYNNEDLILELRLNLLDKHIDKFVIIEARYNHSGVIKENYNFNIENFKKFKEK---IIYLKLEDFP------------------NGFNNWERENYHRNYILKALENTHQ-EDYIII-SDIDEIPNLEEINQVLIDKRKYTAFKQKMIYY-KFNLLNASEPNWYGSKMCKLKYLKNPQWLRNQKVKNYPFYRLDKIKW----NIVDKGGWHFSFVMPLEDVSKKIKSFAHSEFNKKKFTDINQISEKINSHKDLFDR 235
BLAST of jgi.p|Trimin1|157114 vs. uniprot
Match: A0A6C0BAU9_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0BAU9_9ZZZZ) HSP 1 Score: 108 bits (269), Expect = 2.630e-24 Identity = 71/258 (27.52%), Postives = 124/258 (48.06%), Query Frame = 1 Query: 13 IDVVSYNGEPVLEARLEYLSERVDELVIVESKCTHSGTPKPCYFGEKFSDILQKFPNITYLQIDSFPPLIPDVWMKKHAADAYMRGGLGAWFRENYQRDFALPYIQKKYAGKQYIVMCSDVDEIPSLDVVNTLKANYASLSTPIYFHQ-RFYMYNLNWETD-EFWSKAFVINDTGLTPEHSLSDIRTAP-------PKRVFPSAGWHLSFCLAKHDLIRKIQSFAHTEFNKDKFTSEAHVEKCLANGSDIFSRQHVRI 759 ID +NG+ + + RLEYL + +D IVES+ T+SG K + + +D + + ++ P + L AW E YQR+ + + + + G +++ D DE+ ++ + L T +YF Q FY YN D + W+ F+I+ L SL++IR P PS GWH S+ + D+ RKIQSF+HT+ ++++ T+ + + + G DIF R+++++ Sbjct: 3 IDTFMFNGDWITKLRLEYLYDYIDFFYIVESRYTYSGKRKEQLYVDIHNDWFLPYSQKVKIIVNERPAV------------------LNAWEEEAYQRNLIVGSVLRDFPGSDFLLAVCDCDEVYDFSMLPPKEELGHVLKTYVYFPQMNFYYYNFTHIIDGDLWTNPFIIHSDMLKSYPSLTEIRVNKCMGGKLLPTIRMPS-GWHFSYFSSLSDMRRKIQSFSHTDLDREENTNLLTIARRVQEGKDIFGRENLKL 241
BLAST of jgi.p|Trimin1|157114 vs. uniprot
Match: A0A402CWI2_9BACT (Uncharacterized protein n=2 Tax=Capsulimonas corticalis TaxID=2219043 RepID=A0A402CWI2_9BACT) HSP 1 Score: 109 bits (273), Expect = 1.060e-23 Identity = 80/269 (29.74%), Postives = 117/269 (43.49%), Query Frame = 1 Query: 28 YNGEPVLEARLEYLSERVDELVIVESKCTHSGTPKPCYFGEKFSDILQKFPNITYLQIDSFPPLIPDVWMKKHAADAYMRGGLGAWFRENYQRDFALPYIQKKYAGKQYIVMCSDVDEIPSLDVVNTLKANYASL------STPIYFHQRFYMYNLNWETDEFWSKAFVINDTGLTPEHSLSDIRTAPPKRVFPSAGWHLSFCLAKHDLIRKIQSFAHTEFNKDKFTSEAHVEKCLANGSDIFSRQHVRITRTATTDDLPEPIKKFHEK 816 +N +LE RL L VD ++VE+ T SG PKP YF E + FP I ++ ID FP + G W RENY R ++ ++ +VM SD+DEIP + V A YA T F Q Y +N+ +E W + + L + + A V + GWH S+ + K+ AHTEF++ F EAH+E+C+A G+D+F R T + P I + E+ Sbjct: 9 FNELDILEIRLAELMPVVDRFLLVEATETFSGKPKPLYF-EVNKERFAGFP-IEHVIIDKFPDDLQ-----------------GPWARENYPRHLMRERLELSGLSQEDVVMLSDLDEIPRAEAV----ARYARTLQREVPGTVYVFEQHLSYYFVNYRVNEPWYGTRMARWQDIADMQRLRESQGA----VIRNGGWHFSYAGGVQAIREKVAGSAHTEFDRPAFLDEAHIERCMAAGTDLFGRGGEGFTCVPLDETFPAAIARNRER 250
BLAST of jgi.p|Trimin1|157114 vs. uniprot
Match: A0A812ZXC4_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812ZXC4_SYMMI) HSP 1 Score: 103 bits (258), Expect = 4.180e-23 Identity = 67/232 (28.88%), Postives = 114/232 (49.14%), Query Frame = 1 Query: 184 ITYLQIDSFPPLIPD-------VWMKKHAADAYMRGGLGAWFRENYQRDFALPYIQKKYAGKQYIVMCSDVDEIPSLDVVNTLKAN--YASLSTPIYFHQRFYM--YNLNWETDEFWSKAFVINDTGLTPEHSL--SDIRTAPPKRVFPSAGWHLSFCLAKHDLIRKIQSFAHTEFNKDKFTSEAHVEKCLANGSDIFSRQHVRITRT--ATTDDL-PEPIKKFHEKIMFAQ 831 IT+L +D PP D WMK + DA+ W +++QR F +I + + + +C+D DEIPS ++V + + Y ++ T H YM YN +W W+ AF I + L S + T + GWHLS+ L++ D++RK++SF H E++ +F ++ HV +CL G D++ R V++ D L P+ +++ + +M Q Sbjct: 4 ITFLVVDEVPPRPADFIDTQLHAWMKSVSYDAF-------WV-DHFQRAFVRDFIDR---NSKTVYICTDADEIPSRELVASFRDEWMYDAVFTRKTIHIAMYMFYYNFHWAMPSMWTHAFAIGTERYLAQRDLVQSRVITDMEEVELVRGGWHLSYFLSREDIVRKVESFPHREYDLAEFKTDEHVTECLQMGKDMYKRDDVQLIPVDLEVNDHLWPQGWREYQQYVMRLQ 224 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157114 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_814 ID=mRNA_814|Name=jgi.p|Trimin1|157114|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=840bp|location=Sequence derived from alignment at Contig_2:1508194..1509033+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGATTTATTTAATTGATGTCGTTTCTTACAATGGCGAACCAGTCCTGGAback to top protein sequence of jgi.p|Trimin1|157114 >Trimin1|157114|e_gw1.2.43.1 ID=Trimin1|157114|e_gw1.2.43.1|Name=jgi.p|Trimin1|157114|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=280bp MIYLIDVVSYNGEPVLEARLEYLSERVDELVIVESKCTHSGTPKPCYFGEback to top mRNA from alignment at Contig_2:1508194..1509033+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_814 ID=mRNA_814|Name=jgi.p|Trimin1|157114|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=840bp|location=Sequence derived from alignment at Contig_2:1508194..1509033+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_2:1508194..1509033+ >mRNA_814 ID=mRNA_814|Name=jgi.p|Trimin1|157114|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=840bp|location=Sequence derived from alignment at Contig_2:1508194..1509033+ (Tribonema minus UTEX_B_3156 )back to top |