mRNA_8014 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|128766 vs. uniprot
Match: A0A836C8E3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E3_9STRA) HSP 1 Score: 518 bits (1333), Expect = 1.850e-185 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 1
Query: 1 LKLQRLGKGASSSVYMAVCVRTLAVVALKESPIRTAADRDAVRSELQALRTQRSPLMDRSFVGDDTASPHIVRFYGGVMLQERTAVLAVELVAGGSLQAFIDRGSPAPEPWLAHVAHSCLLALQTLHENGRTHRDIKPANCLITCEGDAKLADFGCASGDLGRRMVGTRRYLPPEVLKGEAVLPKSDVWSFGLTMAAAACADPPVAQAQNEFEQLQAAERVRTTIAQLHNISPQLRDFLSLCLVVNPSERASIAELLEHPFLQR 792
LKLQRLGKGASSSVYMAVCVRTLAVVALKESPIRTAADRDAVRSELQALRTQRSPLMDRSFVGDDTASPHIVRFYGGVMLQERTAVLAVELVAGGSLQAFIDRGSPAPEPWLAHVAHSCLLALQTLHENGRTHRDIKPANCLITCEGDAKLADFGCASGDLGRRMVGTRRYLPPEVLKGEAVLPKSDVWSFGLTMAAAACADPPVAQAQNEFEQLQAAERVRTTIAQLHNISPQLRDFLSLCLVVNPSERASIAELLEHPFLQR
Sbjct: 1 LKLQRLGKGASSSVYMAVCVRTLAVVALKESPIRTAADRDAVRSELQALRTQRSPLMDRSFVGDDTASPHIVRFYGGVMLQERTAVLAVELVAGGSLQAFIDRGSPAPEPWLAHVAHSCLLALQTLHENGRTHRDIKPANCLITCEGDAKLADFGCASGDLGRRMVGTRRYLPPEVLKGEAVLPKSDVWSFGLTMAAAACADPPVAQAQNEFEQLQAAERVRTTIAQLHNISPQLRDFLSLCLVVNPSERASIAELLEHPFLQR 264
BLAST of jgi.p|Trimin1|128766 vs. uniprot
Match: A0A835Z6W9_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6W9_9STRA) HSP 1 Score: 241 bits (616), Expect = 2.050e-77 Identity = 123/193 (63.73%), Postives = 144/193 (74.61%), Query Frame = 1
Query: 211 IVRFYGGVMLQERTAVLAVELVAGGSLQAFIDRGSPAPEPWLAHVAHSCLLALQTLHENGRTHRDIKPANCLITCEGDAKLADFGCASGDLGRRMVGTRRYLPPEVLKGEAVLPKSDVWSFGLTMAAAACADPPVAQAQNEFEQLQAAERVRTTIAQLHN-ISPQLRDFLSLCLVVNPSERASIAELLEHPFL 786
IV+FYG T LA+E V GGSLQA+IDR + APEPWLAH++H CLLALQ LH GR H D+KPAN L+T EGDAKLADFGCAS + R M+GTRRY+ PE LKGE V+P+SDVWSFGL MAAAA A+ PVAQA NEF+Q+ ERVR IA H +SP+LRDFL CL +P+ RA +A LL HPFL
Sbjct: 1 IVKFYGCYTPVAHTVCLAMEYVGGGSLQAWIDRHAAAPEPWLAHISHQCLLALQYLHSCGRAHCDVKPANVLVTREGDAKLADFGCASSSVARTMLGTRRYMAPERLKGEQVVPESDVWSFGLAMAAAALAECPVAQAHNEFDQVHEGERVRGFIAAQHGALSPELRDFLCACLEPDPAARAGVAALLRHPFL 193
BLAST of jgi.p|Trimin1|128766 vs. uniprot
Match: A0A485LGC3_9STRA (Aste57867_20998 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LGC3_9STRA) HSP 1 Score: 139 bits (350), Expect = 8.830e-34 Identity = 92/270 (34.07%), Postives = 142/270 (52.59%), Query Frame = 1
Query: 1 LKLQRLGKGASSSVYMAVCVRTLAVVALKESPIRTAADRDAVRSELQALRTQRSPLMDR--SFVGDDTASPHIVRFYGGVMLQERTAV-LAVELVAGGSLQAFIDRGSPAPEPWLAHVAHSCLLALQTLHENGRTHRDIKPANCLITCEGDAKLADFGCA-----SGDLGRRMVGTRRYLPPEVLKGEAVLPKSDVWSFGLTMAAAACADPPVAQAQNEFEQLQAAERVRTTIAQLHNISPQLRDFLSLCLVVNPSERASIAELLEHPFL 786
++++ +G+GAS VY AV + TL VVA+KE P+ R + EL AL + PL + S G SP+IV FY + + + + L +E + GSLQ + +G E +AH+A S L L+ +H N HRDIKP N L+ +G+ K++DFG A + + VGT Y+ PE + G +D+WSFGL + + A P+ Q+ F L + + S + RDF+ CL + P +R + +LL+HPF+
Sbjct: 314 VRVREVGRGASGIVYKAVHLPTLKVVAIKEIPVYGTNQRRQMVRELHALYSNLVPLDENKTSPGGVRLPSPYIVSFYDAYVDKHKNCISLVMEYMGVGSLQDVVLKGGCPSEQLVAHIATSVLRGLKHIHGNKMVHRDIKPHNLLMNHQGEIKISDFGLARTLNDNATQTKTFVGTLLYMAPERIAGNDYAYPADIWSFGLVLVSIALGRYPL-PTQDGFFGLVDSVANEGLLKLPEQFSEECRDFMDKCLAIEPEDRWTAEQLLDHPFI 582
BLAST of jgi.p|Trimin1|128766 vs. uniprot
Match: G4ZBN9_PHYSP (Protein kinase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZBN9_PHYSP) HSP 1 Score: 131 bits (330), Expect = 1.010e-31 Identity = 86/282 (30.50%), Postives = 140/282 (49.65%), Query Frame = 1
Query: 4 KLQRLGKGASSSVYMAVCVRTLAVVALKESPIRTAADRDAVRSELQALRTQRSPLMDRS-------FVGDDTA------SPHIVRFYGGVMLQERTAV-LAVELVAGGSLQAFIDRGSPAPEPWLAHVAHSCLLALQTLHENGRTHRDIKPANCLITCEGDAKLADFGCA-----SGDLGRRMVGTRRYLPPEVLKGEAVLPKSDVWSFGLTMAAAACADPPVAQAQNEFEQLQAAERVRTTIAQLHNISPQLRDFLSLCLVVNPSERASIAELLEHPFLQR 792
+++ +G+GAS VY A+ + TL VVA+K+ P+ R + EL AL + P+ D G T SP+IV FY + + + ++ + +E ++ GSLQ + RG E LA +A L L +H HRDIKP N L +G+ K++DFG A + + VGT Y+ PE + G +DVWSFGL + + A P+ F + + + + S + R F+ C++++P +R S +LL+HPF+++
Sbjct: 30 RVKEIGRGASGVVYKAIHIPTLKVVAVKDVPVYGRGQRRQMVRELHALYSNLVPMSDNDSPVPQHPVPGKSTTKPKAKPSPYIVSFYDAFVDRPKNSICMVMEYMSTGSLQDIVLRGGCQNEKVLARLATGVLHGLAHIHNKRMVHRDIKPHNLLTNRQGEVKISDFGLARTLNDNSTTTKTFVGTLLYMAPERIGGGDYSYPADVWSFGLALISVALGRYPLPTQDGFFGLVDSVANEQRLKLPAESFSEECRSFVDQCVLIDPEQRPSAEDLLQHPFIRK 311
BLAST of jgi.p|Trimin1|128766 vs. uniprot
Match: A0A1S3HCF9_LINUN (Non-specific serine/threonine protein kinase n=3 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HCF9_LINUN) HSP 1 Score: 130 bits (327), Expect = 3.440e-31 Identity = 94/268 (35.07%), Postives = 142/268 (52.99%), Query Frame = 1
Query: 4 KLQRLGKGASSSVYMAVCVRTLAVVALKESPIRTAADRDAVRSELQALRTQRSPLMDRSFVGDDTASPHIVRFYGGVMLQERTAVLAVELVAGGSLQAFIDRGSPAPEPWLAHVAHSCLLALQTLHENGRTHRDIKPANCLITCEGDAKLADFG-CA--SGDLGRR--MVGTRRYLPPEVLKGEAVLPKSDVWSFGLTMAAAACADPPVAQAQNEFEQLQA-AERVRTTIAQLHNISPQLRDFLSLCLVVNPSERASIAELLEHPFLQ 789
K++++G+GAS +VY+AV V T VA+K + ++ + +E+ +R + +P+IV + +L E V+ +E +AGGSL + + E ++ V+ CL AL+ LHEN HRDIK N L+ +G KL DFG CA S + +R MVGT ++ PEV+ + PK DVWS G+ +PP +N L A + I + H +SP +DFL CL V+ RAS +ELL+HPFL+
Sbjct: 241 KMEKIGQGASGTVYIAVEVATGREVAIKRMNLSQQPKKELIINEILVMR--------------ENKNPNIVNYLDSYLLGEELWVV-MEYLAGGSLTDVVTE-TCMDEGQISAVSRECLQALEFLHENQVIHRDIKSDNILLGMDGSVKLTDFGFCAQLSPEQNKRNTMVGTPYWMAPEVVTRKQYGPKVDVWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGKPEIKEKHKLSPIFQDFLDRCLEVDVERRASASELLKHPFLR 491
BLAST of jgi.p|Trimin1|128766 vs. uniprot
Match: A0A1V9ZXW4_9STRA (Dual specificity mitogen-activated protein kinase kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXW4_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.230e-30 Identity = 86/275 (31.27%), Postives = 136/275 (49.45%), Query Frame = 1
Query: 1 LKLQRLGKGASSSVYMAVCVRTLAVVALKESPIRTAADRDAVRSELQALRTQRSPLMD-RSFVGDDTA----SPHIVRFYGGVMLQERTAV-LAVELVAGGSLQAFIDRGSPAPEPWLAHVAHSCLLALQTLHENGRTHRDIKPANCLITCEGDAKLADFGCA-----SGDLGRRMVGTRRYLPPEVLKGEAVLPKSDVWSFGLTMAAAACADPPVAQAQNEFEQLQAAERVRTTIAQLHNISPQLRDFLSLCLVVNPSERASIAELLEHPFLQR 792
++++ +G+GAS V+ AV + TL VVA+K+ P+ R + EL AL +PL + RS + SP+IV FY + + + + L +E + GSLQ + G + E L +A+S L L +H N HRD+KP N L+ +G+ K++DFG A + + VGT Y+ PE + G +D+WSFGL + + A P+ F + S +DFL CL ++P ER + +LL H F+ +
Sbjct: 431 VRVREVGRGASGIVFKAVHIPTLKVVAIKDVPVYGKGQRRQMVRELHALYANLAPLTEPRSHTASSPSMRLPSPYIVSFYDAFVDKPKNCICLVMEYMGVGSLQDMVTHGGCSSEKILCRIANSVLRGLSHIHANRMVHRDVKPHNLLMNHQGEIKISDFGLARTLNENAMHTKTFVGTLLYMAPERISGSDYGCPADIWSFGLVLISVALGRYPLPTQDGFFGLFDSVVNEEFLKVPTDVFSRDFQDFLDKCLTIDPEERWTAEQLLNHRFVTK 705
BLAST of jgi.p|Trimin1|128766 vs. uniprot
Match: UPI001E1D72C1 (serine/threonine-protein kinase PAK 2-like isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D72C1) HSP 1 Score: 128 bits (322), Expect = 1.810e-30 Identity = 92/268 (34.33%), Postives = 142/268 (52.99%), Query Frame = 1
Query: 4 KLQRLGKGASSSVYMAVCVRTLAVVALKESPIRTAADRDAVRSELQALRTQRSPLMDRSFVGDDTASPHIVRFYGGVMLQERTAVLAVELVAGGSLQAFIDRGSPAPEPWLAHVAHSCLLALQTLHENGRTHRDIKPANCLITCEGDAKLADFG-CA--SGDLGRR--MVGTRRYLPPEVLKGEAVLPKSDVWSFGLTMAAAACADPPVAQAQNEFEQLQA-AERVRTTIAQLHNISPQLRDFLSLCLVVNPSERASIAELLEHPFLQ 789
K++++G+GAS +VY+A+ V T VA+K + ++ + +E+ +R ++P +IV F ++ E V+ +E +AGGSL + + E +A VA CL AL+ LHEN HRDIK N L+ +G KL DFG CA S + +R MVGT ++ PEV+ + P D+WS G+ +PP +N L A + I + H +SP +DFL CL V+ +RA+ +ELL+HPFL+
Sbjct: 246 KMEKIGQGASGTVYIAIEVATGREVAIKAMNLSQQPKKELIINEILVMREHQNP--------------NIVNFLDSYLVGEELWVV-MEYLAGGSLTDVVT-DTCMDEGQIAAVARECLQALEFLHENNVIHRDIKSDNILLGMDGSVKLTDFGFCAQLSPEQNKRSTMVGTPYWMAPEVVTRKQYGPTVDIWSLGIMCIEMIEGEPPYLN-ENPIRALYLIATNGKPEIKEKHTLSPVFQDFLDKCLEVDVEKRAAASELLKHPFLR 496
BLAST of jgi.p|Trimin1|128766 vs. uniprot
Match: A0A139ALL3_GONPJ (Pkinase-domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139ALL3_GONPJ) HSP 1 Score: 124 bits (311), Expect = 3.110e-30 Identity = 88/270 (32.59%), Postives = 140/270 (51.85%), Query Frame = 1
Query: 7 LQRLGKGASSSVYMAVCVRTLAVVALKESPIRTAADRDAVRSELQALRTQRSPLMDRSFVGDDTASPHIVRFYGGVMLQERTAVLAVELVAGGSLQAFIDRGSPAPEPWLAHVAHSCLLALQTLHENGRTHRDIKPANCLITCEGDAKLADFGCAS---GDLGRR--MVGTRRYLPPEVLKGEAVLPKSDVWSFGLTMAAAACADPPVAQAQNEFEQLQAAERVRTT----IAQLHNISPQLRDFLSLCLVVNPSERASIAELLEHPFLQ 789
+ +LG+G+ SVY A+ RT ++VALK P+ D ++ E+ +R DT SP++VRF+G ++ ++ VAG L + + R EP +A V L L+ LH + HRDIK N L+ G+AKLADFG A+ + +R ++GT ++ PEV++ +D+WS G+T+ A PP + ++A + T + S +RDFL+LCLV +PS+R S +LL+HPF++
Sbjct: 23 ISKLGEGSYGSVYKALHRRTGSLVALKIVPLDEG-DLASISKEIDMVR--------------DTRSPYLVRFHGSLVSGGNLYIVMECCVAGSVLDSMVLRKRTLSEPQIACVVRYVLQGLEYLHGLRKIHRDIKAGNILLDARGEAKLADFGVAAQLTDAVVKRNTVIGTPYWMAPEVIQEVGYGTSADIWSLGITVIEMAEGRPP----HHNVHPMRAIFMIPTKPPPKFENESHYSSNMRDFLALCLVKDPSKRPSATQLLQHPFVK 273
BLAST of jgi.p|Trimin1|128766 vs. uniprot
Match: A0A662XBM9_9STRA (Protein kinase domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XBM9_9STRA) HSP 1 Score: 128 bits (322), Expect = 3.170e-30 Identity = 94/274 (34.31%), Postives = 137/274 (50.00%), Query Frame = 1
Query: 4 KLQRLGKGASSSVYMAVCVRTLAVVALKESPIRTAADRDAVRSELQALRTQRSPL-MDRSF---VGDDTAS-PHIVRFYGGVMLQERTAVLAV-ELVAGGSLQAFIDRGSPAPEPWLAHVAHSCLLALQTLHENGRTHRDIKPANCLITCEGDAKLADFGCASGDLGRRMV------GTRRYLPPEVLKGEAVLPKSDVWSFGLTMAAAACADPPVAQAQNEFEQLQAAERVRTTIAQLHNISPQLRDFLSLCLVVNPSERASIAELLEHPFLQ 789
++++LGKGA +V++A+ + L +VA+KE + +R V+ EL AL +P+ +D G+ + P++V FYG + + AV V E + GS+Q +D E L H A C+ AL +H HRDIKPAN L+ GD K+ADFG A G L + GT Y+ PE + G SDVWS G+ + + A P + F L+ A T + S RDF+ L P+ER + AE L HPFL+
Sbjct: 182 RVKKLGKGAGGTVFLALYLPVLKLVAVKEVVVYQEEERHMVKRELHALHENLAPIDVDTGAFQAAGESSGPCPYLVAFYGAYLKPTKCAVSVVMEFMDMGSVQDLLDAAVTVSESVLRHAAFCCITALDHMHSQRMIHRDIKPANILMNRRGDFKVADFGLA-GTLAKSKSFFSTFNGTMMYMAPERISGTQYTCVSDVWSLGIVLFSLATGAYPFT-VDDGFFGLEEAICQDTLPPMPNRFSSSCRDFIKRMLSREPTERLTSAEGLAHPFLR 453
BLAST of jgi.p|Trimin1|128766 vs. uniprot
Match: K1QXI4_CRAGI (Non-specific serine/threonine protein kinase n=7 Tax=Crassostrea TaxID=6564 RepID=K1QXI4_CRAGI) HSP 1 Score: 127 bits (318), Expect = 6.440e-30 Identity = 91/268 (33.96%), Postives = 141/268 (52.61%), Query Frame = 1
Query: 4 KLQRLGKGASSSVYMAVCVRTLAVVALKESPIRTAADRDAVRSELQALRTQRSPLMDRSFVGDDTASPHIVRFYGGVMLQERTAVLAVELVAGGSLQAFIDRGSPAPEPWLAHVAHSCLLALQTLHENGRTHRDIKPANCLITCEGDAKLADFG-CA--SGDLGRR--MVGTRRYLPPEVLKGEAVLPKSDVWSFGLTMAAAACADPPVAQAQNEFEQLQA-AERVRTTIAQLHNISPQLRDFLSLCLVVNPSERASIAELLEHPFLQ 789
K++++G+GAS +VY+A+ V T VA+K + ++ + +E+ +R + +P+IV + ++ E V+ +E +AGGSL + + E +A V CL AL+ LHEN HRDIK N L+ +G KL DFG CA S + +R MVGT ++ PEV+ + PK D+WS G+ +PP +N L A + I + H +SP +D L CL V+ +RAS +ELL+HPFL+
Sbjct: 244 KMEKIGQGASGTVYIAIEVATGREVAIKTMNLSQQPKKELIINEILVMR--------------ENQNPNIVNYLDSYLVGEELWVV-MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHENQVIHRDIKSDNILLGMDGSVKLTDFGFCAQLSPEQSKRSTMVGTPYWMAPEVVTRKQYGPKVDIWSLGVMAIEMIEGEPPYLN-ENPLRALYLIATNGKPEIKEKHKLSPVFQDLLDKCLEVDVEKRASASELLKHPFLR 494 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|128766 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8014 ID=mRNA_8014|Name=jgi.p|Trimin1|128766|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=792bp|location=Sequence derived from alignment at Contig_94:575063..575979+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CTCAAGCTGCAGCGGCTAGGCAAGGGCGCCAGCAGCAGCGTATACATGGCback to top protein sequence of jgi.p|Trimin1|128766 >Trimin1|128766|gw1.94.2.1 ID=Trimin1|128766|gw1.94.2.1|Name=jgi.p|Trimin1|128766|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=264bp LKLQRLGKGASSSVYMAVCVRTLAVVALKESPIRTAADRDAVRSELQALRback to top mRNA from alignment at Contig_94:575063..575979+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8014 ID=mRNA_8014|Name=jgi.p|Trimin1|128766|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=917bp|location=Sequence derived from alignment at Contig_94:575063..575979+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_94:575063..575979+ >mRNA_8014 ID=mRNA_8014|Name=jgi.p|Trimin1|128766|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=792bp|location=Sequence derived from alignment at Contig_94:575063..575979+ (Tribonema minus UTEX_B_3156 )back to top |