mRNA_8004 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|129082
Unique NamemRNA_8004
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|129082 vs. uniprot
Match: A0A835YGV0_9STRA (TB2/DP1, HVA22 family-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGV0_9STRA)

HSP 1 Score: 537 bits (1384), Expect = 1.540e-193
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1
Query:    1 LLMTVTGKGGQCGLCDNITSLLLHLEDGSPDAIECSAICLWRFQRCIKTCERIKRALSESSHYPCVAAGMCPASDAYGEVNQCSYSWKQRSCLPEGPCYMKLRFPRPSCQLKPGFLEFNHYTQALRRNTGALARAVRELPRCGEPGAHATFCVNEPTGTGWAAMVVSYALVSVVGVWQSVRAVETPGGDDDRQWLAFWIIMFGFFTLERFVDVLLSWAPHYYEAKLAAVLYLMFGRGADLVYRRVHRAFVSAQRL 765
            LLMTVTGKGGQCGLCDNITSLLLHLEDGSPDAIECSAICLWRFQRCIKTCERIKRALSESSHYPCVAAGMCPASDAYGEVNQCSYSWKQRSCLPEGPCYMKLRFPRPSCQLKPGFLEFNHYTQALRRNTGALARAVRELPRCGEPGAHATFCVNEPTGTGWAAMVVSYALVSVVGVWQSVRAVETPGGDDDRQWLAFWIIMFGFFTLERFVDVLLSWAPHYYEAKLAAVLYLMFGRGADLVYRRVHRAFVSAQRL
Sbjct:    1 LLMTVTGKGGQCGLCDNITSLLLHLEDGSPDAIECSAICLWRFQRCIKTCERIKRALSESSHYPCVAAGMCPASDAYGEVNQCSYSWKQRSCLPEGPCYMKLRFPRPSCQLKPGFLEFNHYTQALRRNTGALARAVRELPRCGEPGAHATFCVNEPTGTGWAAMVVSYALVSVVGVWQSVRAVETPGGDDDRQWLAFWIIMFGFFTLERFVDVLLSWAPHYYEAKLAAVLYLMFGRGADLVYRRVHRAFVSAQRL 255          
BLAST of jgi.p|Trimin1|129082 vs. uniprot
Match: A0A7S0V805_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V805_9CRYP)

HSP 1 Score: 220 bits (561), Expect = 4.120e-65
Identity = 109/249 (43.78%), Postives = 148/249 (59.44%), Query Frame = 1
Query:   19 GKGGQCGLCDNITSLLLHLE-DGSPDAIECSAICLWRFQRCIKTCERIKRALSESSHYPCVAAGMCPASDAYGEVNQCSYSWKQRSCLPEGPCYMKLRFPRPSCQLKPGFLEFNHYTQALRRNTGALARAVRELPRCGEPGAHATFCVNEPTGTGWAAMVVSYALVSVVGVWQSVRAVETPGGDDDRQWLAFWIIMFGFFTLERFVDVLLSWAPHYYEAKLAAVLYLMFGRGADLVYRRVHRAFVSAQR 762
            G G  C LCD + + +L  E DGS   ++C+A+C W   +C+  C ++  A+  S  +PCVAAG CPA D +G + +C Y +   SC P   C  K     P CQL  G+ ++      +  N GALA A+  +P+CGEPGAHA  CVNEPTG G  A  ++Y L +   + +S+ A+ETPGGDDDRQWL+FW+I       E   DVLLSW P+YYEAKL  V +L+   G+D +YR VH  F  A +
Sbjct:   79 GDGAACTLCDRVMNTMLSGESDGSVQDVDCNALC-WSLSKCVNMCTKLVAAIHTSGRFPCVAAGYCPAMDEFGALPRCKYRFPA-SCSPSNICSFKF----PKCQLSDGYKKWRKMNAMISENVGALAGALGRMPKCGEPGAHALLCVNEPTGLGLWAKRMAYLLAAWAAI-KSIEAIETPGGDDDRQWLSFWVIYLAMTVFESVSDVLLSWLPNYYEAKLVFVGWLVLFHGSDWLYRSVHSLFKRANK 320          
BLAST of jgi.p|Trimin1|129082 vs. uniprot
Match: A0A7S4UTK0_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UTK0_GUITH)

HSP 1 Score: 217 bits (552), Expect = 2.030e-62
Identity = 113/256 (44.14%), Postives = 152/256 (59.38%), Query Frame = 1
Query:    1 LLMTVTGKG--GQCGLCDNITSLLLHLEDGSPDAIE----CSAICLWRFQRCIKTCERIKRALSESSHYPCVAAGMCPASDAYGEVNQCSYSWKQRSCLPEGPCYMKLRFPRPSCQLKPGFLEFNHYTQALRRNTGALARAVRELPRCGEPGAHATFCVNEPTGTGWAAMVVSYALVSVVGVWQSVRAVETPGGDDDRQWLAFWIIMFGFFTLERFVDVLLSWAPHYYEAKLAAVLYLMFG-RGADLVYRRVHRAF 747
            L  T+ G+G   +C LCD + + +L   D + +A+E    C  +C ++F+RC+  CE++ ++++ SS +PC A G CP  D +GE  QC Y      C P   C +K R P P C+LK G+ ++  Y   L  N GALA AV++LP+CGE GA   FCVNE TG       + Y LV VVG + S+RA+ET GGDDDRQWL FW+I F F  +ERF  VLLS  P YYE KL  V++L     GA   Y  +HR F
Sbjct:   45 LWQTILGRGKEARCSLCDEVVNHILDFGD-TKEALEDNGFCEDLCPFKFRRCVDMCEKLIKSITTSSKFPCEAIGACPELDEFGEEIQCKYQMGS-GCTPSHMCKLKARLPMPRCELKDGYKQWKKYKMVLFENVGALAEAVKKLPKCGEEGASEVFCVNEATGFSLICEYLGYFLVFVVGSFNSIRAIETKGGDDDRQWLTFWVIYFIFSMVERFSSVLLSRLPVYYEVKLLLVIWLFPPFYGARWCYVTIHRTF 298          
BLAST of jgi.p|Trimin1|129082 vs. uniprot
Match: A0A7S0I128_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0I128_9CRYP)

HSP 1 Score: 215 bits (548), Expect = 1.540e-61
Identity = 109/252 (43.25%), Postives = 149/252 (59.13%), Query Frame = 1
Query:   19 GKGGQCGLCDNITSLLLHLEDGSPDAIE----CSAICLWRFQRCIKTCERIKRALSESSHYPCVAAGMCPASDAYGEVNQCSYSWKQRSCLPEGPCYMKLRFPRPSCQLKPGFLEFNHYTQALRRNTGALARAVRELPRCGEPGAHATFCVNEPTGTGWAAMVVSYALVSVVGVWQSVRAVETPGGDDDRQWLAFWIIMFGFFTLERFVDVLLSWAPHYYEAKLAAVLYLMFG-RGADLVYRRVHRAFVSAQ 759
            GK  +C LCD + + +L   D + DA+E    C  +C ++F++C++ C+ + ++++ SS +PC A G CP  D YGE  +C Y      C P   C +K R P P C+LK G+ ++  Y   L  N GALA AV+ LP+CGE GA   FCVNE TG       + Y +V V+G + S+RA+ET GGDDDRQWL FW+I F F  +ERF  VLLS  P YYE KL  V++L     GA   Y  +HR F  A+
Sbjct:  102 GKEARCNLCDEVVNHILDFGD-TRDALEDNGFCENLCPFKFRKCVEMCQSLVQSITTSSKFPCEAIGACPELDEYGEEVECKYQMGS-GCTPSHMCKLKARLPIPRCELKNGYKQWKKYRMVLFENVGALAEAVKRLPKCGEEGASEVFCVNEATGLSLVCEYLGYFMVFVIGSFNSIRAIETKGGDDDRQWLTFWVIYFLFSMVERFSSVLLSRLPVYYEIKLLVVIWLFPPFYGARWCYVTIHRIFTGAR 351          
BLAST of jgi.p|Trimin1|129082 vs. uniprot
Match: A0A7S0J7X7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J7X7_9EUKA)

HSP 1 Score: 195 bits (496), Expect = 8.440e-58
Identity = 105/256 (41.02%), Postives = 149/256 (58.20%), Query Frame = 1
Query:   19 GKGGQCGLCDNITSLLL---HLEDGSPDA-IECSAICLWRFQRCIKTCERIKRALSESSHYPCVAAGMCPASDAYGEVNQCSYSWKQRSCLPEGPCYMKLRFPRPSCQLKPGFLEFNHYTQALRRNTGALARAVRELPRCGEPGAHATFCVNEPTGTG----WAAMVVSYALVSVVGVWQSVRAVETPGGDDDRQWLAFWIIMFGFFTLERFVDVLLSWAPHYYEAKLAAVLYLMFGRGADLVYRRVHRAFVSAQR 762
            G    CGLCD +  ++L    LE  S    I+CS++C +RF++C +TCE I  A++ S+ +PCVA G+CPA+D +GEV+ C +S++   C P   C  K     P C+L+ G  ++   ++ L  N  A  +A+R   RC EPGA   +C+ E TG G    W  MV+ +     +G+  ++ A+ETPGG DDRQWL FW+IM      E+F DVLLSW P YYE K   +L+LMF  GAD++YR   R      R
Sbjct:   44 GNDASCGLCDKLVGVVLKQMELETMSEGGDIDCSSLC-FRFKKCTRTCETITGAMANSTGFPCVAVGICPAADEFGEVS-CRWSYRSMGCEPTRSCEYKF----PKCELRSGLKKWKQVSRLLSDNVRAFDQALRFRRRCSEPGA-GPYCIREATGLGRLANWGGMVLIF-----IGLGLAIHAIETPGGADDRQWLTFWMIMVLMCIAEQFTDVLLSWMPVYYEIKFLLLLWLMFYHGADMLYRGARRGLKKLSR 287          
BLAST of jgi.p|Trimin1|129082 vs. uniprot
Match: A0A7S3NJ17_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJ17_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.040e-41
Identity = 103/277 (37.18%), Postives = 143/277 (51.62%), Query Frame = 1
Query:   34 CGLCDNITSLLLHLEDGSPDAIECSAIC---LWRFQRCIKTCERIKRALSESSHYPCVAAGMCPASDAYGEVN----QCSYSWKQRSCLPEGPCYM------KLRF-------------PRPSCQLKPGFLEFNHYTQALRRNTGALARAVRELPRCGEPGAHATFCVNEPT-------GTGWAAMV---------VSYALVSVVGVWQSVRAVETPGGDDDRQWLAFWIIMFGFFTLER-FVDVLLSWAPHYYEAKLAAVLYLMFGRGADLVYRRV 735
            C LCD+  SLLL  +  SP+ + C A+C   +    RC+  CERI  A+S SSHYPC+AAG+C   +  G V+     CSY  K RSC P   C M       LR+              R  C+  PG   +  Y  ++ R+  ALA A+   P CGEPGAH  FCV + +        +GW + +         +S  LV + G+++S+RAVETPGG D +Q L FW I+   + LER    +LLS    YY AKL+ V++L+   G+   Y R+
Sbjct:  121 CELCDSFLSLLLKFDSVSPEDVSCHALCPGVMLNKDRCVAHCERIVSAISTSSHYPCMAAGLCQHEET-GRVSILTLDCSYDEKARSCSPSSLCRMTKTHFFSLRWWKGVLALHAFRPRARTRCEPHPGLARWASYQSSVARHGRALASALVNQPLCGEPGAHPVFCVRDVSVNYFQDHQSGWHSYLAHFDLACDRLSVLLVVIFGLYRSIRAVETPGGADAKQHLTFWCIVTISYALERNLARILLSRLSFYYVAKLSVVIWLVLFEGSATCYHRL 396          
BLAST of jgi.p|Trimin1|129082 vs. uniprot
Match: A0A0M0JZG6_9EUKA (Receptor expression-enhancing protein 5-like protein (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JZG6_9EUKA)

HSP 1 Score: 157 bits (398), Expect = 3.530e-40
Identity = 97/248 (39.11%), Postives = 134/248 (54.03%), Query Frame = 1
Query:   25 GGQCGLCDNITSLLLH------LEDGSPDAIECSAICL---WRFQRCIKTCERIKRALSESSHYPCVAAGMCPASDAYGEVNQCSYSWKQRSCLPEGPCYMKLRFPRPSCQLKPGFLEFNHYTQALRRNTGALARAVRELPRCGEPGAHATFCVNEPTGTGWAAMVVSYALVSVVGVWQSVRAVETPGGDDDRQWLAFWIIMFGFFTLERFVDVLLSWAPHYYEAKLAAVLYLMFGRGADLVYRRVHR 741
            G +C LC  +  ++L       L DG+   I+C  ICL   ++ Q CI TC +I  A+  S+ +PC  AG CPA D +G+V   S +     C P+  C+ +  FP   CQLKPG   +   T  +    GAL  A R+ P           C+ +P GTG  A  V   L  V G+W S+ A+E+PGGDDDRQWL FW+I       E F D+LLS  P YYE KL+ +++L+F +GAD +YR + R
Sbjct:   47 GAKCELCTVLVGIMLAKLDVTALNDGT---IDCQTICLGLPFKAQ-CIGTCGKIIGAMENSTAFPCNGAGFCPAVDEFGQV---SCTGGPLGCTPKTACFYQ--FPG-GCQLKPGVASWRRMTHLVSTEIGALGAAFRQRPPLCSQAKPNQPCILDPEGTGMLANYVGLGLY-VYGLWCSLLAIESPGGDDDRQWLTFWLIALLLTFTEGFYDLLLSRLPIYYELKLSFLIWLIFRKGADEIYRELRR 283          
BLAST of jgi.p|Trimin1|129082 vs. uniprot
Match: A0A7S4KQS6_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KQS6_GUITH)

HSP 1 Score: 134 bits (336), Expect = 3.980e-35
Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 1
Query:   19 GKGGQCGLCDNITSLLLHLE-DGSPDAIECSAICLWRFQRCIKTCERIKRALSESSHYPCVAAGMCPASDAYGEVNQCSYSWKQRSCLPEGPCYMKLRFPRPSCQLKPGFLEFNHYTQALRRNTGALARAVRELPRCGEPGAHATFCVNEP 468
            G+G  C LCD + +++L  E +G    I+C A+C +  +RCI  C+++ +ALSESS +PCVAAG CP  D +GEV +C Y +   SC P   C  K     P CQL  G+ ++    + +  N GA A A+ + P+CGEPGAH +FC+NEP
Sbjct:   63 GEGAMCTLCDKVMTMMLSGEAEGGLSDIDCRAMC-FGLKRCITICDKLVKALSESSKFPCVAAGYCPQIDEFGEVPKCKYHFPA-SCEPSNMCTYKF----PGCQLSDGYKKWRKMNKMMSENVGAPANALGKAPKCGEPGAHPSFCINEP 207          
BLAST of jgi.p|Trimin1|129082 vs. uniprot
Match: A0A7S4QNW1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QNW1_9STRA)

HSP 1 Score: 139 bits (350), Expect = 6.150e-34
Identity = 85/249 (34.14%), Postives = 130/249 (52.21%), Query Frame = 1
Query:   34 CGLCDNITSLLLHLEDGSPDAIECSAICLWRFQRCIKTCERIKRALSESSHYPCVAAGMCPA-----------SDAYGEVNQCSYSWKQRSCLPEGPCYMKLRFPRPSCQLKPGFLEFNHYTQALRRNTGALARAVRELPRCGEP-GAHATFCVNEPTGTGWAAMVVSYALVSVVGVWQSVRAVETPGGDDDRQWLAFWIIMFGFFTLERFVDVLLSWA-PHYYEAKLAAVLYLMFGRGADLVYRRVHR 741
            C LCD +   L+   +   D I CS IC +R +RC+  CE +K     +  +PCV+AG CPA            D    V +C  +  Q  C P   C   ++  R  C+LKPG  ++    +    +  A+A A+   P C E  GA   FC+ +P G  + A +++  LV  VGV++S++A+ TPG DDD Q L FW+++    ++E +  V+LS   P Y+ AK   V +L+F  GA+ +YRR+ R
Sbjct:   89 CQLCDRVMEDLMEATEDVQD-IPCSIIC-FRMKRCVDMCEGLKEVQESAQEFPCVSAGYCPAPDDDEYAVERGGDNVDGVPECRMNNFQ--CGPASHCQRVMKGLRLRCELKPGIKKWVQMRRHALGSAVAVASAMMTWPHCSEENGAETQFCIADPRGYAYVAHLITMFLVFGVGVYRSLKALMTPGSDDDAQCLTFWLVVAVLSSIEGYAKVILSQNFPPYFYAKCLFVAWLLFNDGAEKIYRRLIR 333          
BLAST of jgi.p|Trimin1|129082 vs. uniprot
Match: A0A6T8HR41_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8HR41_HEMAN)

HSP 1 Score: 134 bits (338), Expect = 7.370e-34
Identity = 63/117 (53.85%), Postives = 81/117 (69.23%), Query Frame = 1
Query:  388 GALARAVRELPRCGEPGAHATFCVNEPTGTGWAAMVVSYALVSVVGVWQSVRAVETPGGDDDRQWLAFWIIMFGFFTLERFVDVLLSWAPHYYEAKLAAVLYLMFGRGADLVYRRVH 738
            GALA A+  +P+CGEPGAHA  CVNEPTG G  A   +Y L +   + +S+ A+ETPGGDDDRQWL+FW+I       E   DVLLSW P+YYEAKL  +++L+   G+D +YR VH
Sbjct:    2 GALAGALGRMPKCGEPGAHALLCVNEPTGLGLWAKRTAYLLAAWAAI-KSIEAIETPGGDDDRQWLSFWVIYLAMTVFESVSDVLLSWLPNYYEAKLVFLVWLVLFHGSDWLYRSVH 117          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|129082 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YGV0_9STRA1.540e-193100.00TB2/DP1, HVA22 family-domain-containing protein (F... [more]
A0A7S0V805_9CRYP4.120e-6543.78Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S4UTK0_GUITH2.030e-6244.14Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S0I128_9CRYP1.540e-6143.25Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S0J7X7_9EUKA8.440e-5841.02Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A7S3NJ17_9STRA1.040e-4137.18Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
A0A0M0JZG6_9EUKA3.530e-4039.11Receptor expression-enhancing protein 5-like prote... [more]
A0A7S4KQS6_GUITH3.980e-3543.05Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A7S4QNW1_9STRA6.150e-3434.14Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6T8HR41_HEMAN7.370e-3453.85Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_94contigContig_94:526421..528939 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|129082|gw1.94.5.1
BRITEko00000,ko04147
KEGG koko:K17279
Descriptionendoplasmic reticulum tubular network membrane organization
COG categoryU
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5052@1|root,KOG1725@2759|Eukaryota
Evalue1.51e-25
Seed ortholog55529.EKX46265
Hectar predicted targeting categoryother localisation
TranscriptId129404
TrackFilteredModels1
ProteinId129082
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|129082gene_8004Tribonema minus UTEX_B_3156 geneContig_94 526421..528939 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|129082Trimin1|129082|gw1.94.5.1Tribonema minus UTEX_B_3156 polypeptideContig_94 526421..528939 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8004_3exon_8004_3Tribonema minus UTEX_B_3156 exonContig_94 526421..526568 -
exon_8004_2exon_8004_2Tribonema minus UTEX_B_3156 exonContig_94 527580..527939 -
exon_8004_1exon_8004_1Tribonema minus UTEX_B_3156 exonContig_94 528683..528939 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8004CDS_8004Tribonema minus UTEX_B_3156 CDSContig_94 528683..528939 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8004 ID=mRNA_8004|Name=jgi.p|Trimin1|129082|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=765bp|location=Sequence derived from alignment at Contig_94:526421..528939- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTGCTGATGACGGTCACCGGCAAAGGCGGCCAGTGCGGCCTCTGCGACAA
CATCACGAGCCTGCTGCTGCACCTCGAGGACGGCTCGCCCGACGCCATAG
AGTGCTCTGCCATCTGCCTGTGGCGCTTCCAGAGGTGCATCAAGACGTGC
GAGCGCATCAAGCGCGCGCTGAGCGAGTCCTCGCACTACCCGTGCGTCGC
CGCGGGCATGTGCCCCGCGTCGGATGCGTACGGCGAGGTGAATCAGTGCT
CATACAGCTGGAAGCAGCGCTCTTGCCTCCCCGAGGGCCCCTGCTACATG
AAGCTGCGCTTCCCGCGCCCCTCGTGCCAACTCAAGCCCGGCTTCCTCGA
GTTCAACCACTACACGCAGGCGCTGCGGCGCAACACGGGCGCGCTCGCGC
GCGCGGTGCGCGAGCTGCCGCGCTGCGGTGAGCCGGGCGCGCACGCGACG
TTCTGCGTCAACGAGCCCACGGGCACGGGGTGGGCGGCGATGGTCGTCAG
CTACGCGCTCGTGTCGGTGGTCGGCGTGTGGCAGTCGGTCCGCGCCGTGG
AGACGCCCGGCGGCGACGACGACCGCCAGTGGCTCGCCTTCTGGATCATC
ATGTTCGGCTTCTTCACCCTCGAGCGCTTCGTGGACGTCCTCCTCAGCTG
GGCGCCGCACTACTACGAGGCCAAGCTCGCCGCCGTCCTGTACCTCATGT
TCGGCCGCGGCGCCGACCTCGTCTACCGCCGCGTCCACCGCGCCTTTGTC
AGCGCTCAGCGCCTG
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protein sequence of jgi.p|Trimin1|129082

>Trimin1|129082|gw1.94.5.1 ID=Trimin1|129082|gw1.94.5.1|Name=jgi.p|Trimin1|129082|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=255bp
LLMTVTGKGGQCGLCDNITSLLLHLEDGSPDAIECSAICLWRFQRCIKTC
ERIKRALSESSHYPCVAAGMCPASDAYGEVNQCSYSWKQRSCLPEGPCYM
KLRFPRPSCQLKPGFLEFNHYTQALRRNTGALARAVRELPRCGEPGAHAT
FCVNEPTGTGWAAMVVSYALVSVVGVWQSVRAVETPGGDDDRQWLAFWII
MFGFFTLERFVDVLLSWAPHYYEAKLAAVLYLMFGRGADLVYRRVHRAFV
SAQRL
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mRNA from alignment at Contig_94:526421..528939-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8004 ID=mRNA_8004|Name=jgi.p|Trimin1|129082|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2519bp|location=Sequence derived from alignment at Contig_94:526421..528939- (Tribonema minus UTEX_B_3156 )
CTGCTGATGACGGTCACCGGCAAAGGCGGCCAGTGCGGCCTCTGCGACAA CATCACGAGCCTGCTGCTGCACCTCGAGGACGGCTCGCCCGACGCCATAG AGTGCTCTGCCATCTGCCTGTGGCGCTTCCAGAGGTGCATCAAGACGTGC GAGCGCATCAAGCGCGCGCTGAGCGAGTCCTCGCACTACCCGTGCGTCGC CGCGGGCATGTGCCCCGCGTCGGATGCGTACGGCGAGGTGAATCAGTGCT CATACAGGTGAGCGAGCGATAAGGTGAAATAGTGCTCAGGTGAATCCGTG CTCAAGGTGAATCAGTGCTCATACAGGTGAATCAGTGCTCAGGTGGATCA GTGCCTATACAGGTGAGTGATCAATGACATGACTGCAGGGCGCGCTCGAC TTTAGAGGATGCTGTCCCTGGCAGGCCTCGCTGTGTCGCGCACGCACGCG CAAACAACATGCTTCTGGTGCTCGAAGCGTGGTGCAGTGACGTGTTGCGT CGGCATGGTCTGTCTGCAGCGGCTGTCAGTTTTGGGCCCCGTCACGGCAA GATGTGGCTTGCACTGTCTGCGTGCGCATGTCGCCCTGCAAATGCGCATG CAACAGGCGTGGCCTACAGTGCAGCGCAGCGGAGCTTGTAGTACTTGACG TTCAGTGACATGTCGCACCAGCTCCATGCAGATCCGAAGCGCAACAATGT CTTGCACCAGCGGCCACGCAGCAGCAGCGCCCAGCAGTACATCCCCCACC AGTCATGCAAACAGCCCCAACATCTTGTCTCAACAGCACGGCACACCAGC AGCACAGTAATAGGTGGCGGACGATCCATGTGTGCGCTCTCCCGCACCCC CTACCTCCGTCCCCTCCAGCGCGCGTCAGTCGACAGCTGTCCATAGGACC TCGTCAAGCAGCTGCCGAGATGGCACTCAATTGATGTCATCGTGCCAGAT GCGCCACACATCTTGCTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCAG CTGGAAGCAGCGCTCTTGCCTCCCCGAGGGCCCCTGCTACATGAAGCTGC GCTTCCCGCGCCCCTCGTGCCAACTCAAGCCCGGCTTCCTCGAGTTCAAC CACTACACGCAGGCGCTGCGGCGCAACACGGGCGCGCTCGCGCGCGCGGT GCGCGAGCTGCCGCGCTGCGGTGAGCCGGGCGCGCACGCGACGTTCTGCG TCAACGAGCCCACGGGCACGGGGTGGGCGGCGATGGTCGTCAGCTACGCG CTCGTGTCGGTGGTCGGCGTGTGGCAGTCGGTCCGCGCCGTGGAGACGCC CGGCGGCGACGACGACCGCCAGTGGCTCGCCTTCTGGATCATCATGTTCG GCTTCTTCACGTGAGAGGGGGCACCGCTTGACATGTTTTTTCGTGTGGGG TTGAGGTTAGGGTCAGGGGGTAGGGTTGAGGTTAGGGTTAGGGTTACGGT TAGGGTCACCAGTTGGAGACGCCCGGCGGCGACGACGACCGCCAGTGGAT CGCCTTCGGGATCATCATTCTGGGTCCTTCACGTGAGAGGGGGCACCAAT TTGAACATGCTGCGTAGGGTTGCTGCATAGGGTGGCTTGATGTCAAGGTT GTTGCCAGAATCTGGCATCATGTACCTTTGAAAGTTGCAGAGTGAGTGAA TGGTGGAGTGGCAAGCACGCGCAAAGGTGCACGCGGAATTGCCAGACACA CGTGTTCCCCAGTGACTCATCGCTATGTGTGCCATGGCTCAGCTACCGCC ATGCAGAACCCATGTCGGCAGTAGAGGCTACCGCTTTGAAATTGTGTAGC CGCATGAGTATGAGACAATTATGCACATGTGCTGCAGAGGTGGCCCCGGA TAAGTGCCCGTACTTTTCTATGTAGTCAATCCGTAGTGTTTGTCATCTAA CCCTTCGCACCCCCTGGCGATGCATCCGGGGGCTTGCCTTTGACGTCACC ATGTTGGCCGCTCACACGAGCGCCGTGGAGCCTCCTGTTGATGTACATCT GCCTGTTGAAGTAGACATGCCTTTGGTTTGCTTGCGTGCTCACGACACTT TAACATGCCCCGTGAGCAGACTGCACAAAAACGAGCGGGCACTGCCGCAA CCGGCAGATCAGCATCTGATGCCAACGTCGCTTGATCATCCCACCCCCTC ATTACCCGCCCTCCTCCTTCTAACGTGAGCTGTGTTGCTGAGCGGGCCCC TCTGTTTCGTCCGCCACCACTCCCCTATGTACCCGGGCAGTTGAAGTTCA TACTTCACTATGTGCTCGTAGTCCCCAGTCCCCTGGTCCCAAATGTGCCC CCTACCCCCACCCCATGCCTCACCCTGCCTCAATACCAGCCCCCCCCCCC TGCCCCCCCCCCCCCCCCCAGCCTCGAGCGCTTCGTGGACGTCCTCCTCA GCTGGGCGCCGCACTACTACGAGGCCAAGCTCGCCGCCGTCCTGTACCTC ATGTTCGGCCGCGGCGCCGACCTCGTCTACCGCCGCGTCCACCGCGCCTT TGTCAGCGCTCAGCGCCTG
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Coding sequence (CDS) from alignment at Contig_94:526421..528939-

>mRNA_8004 ID=mRNA_8004|Name=jgi.p|Trimin1|129082|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=765bp|location=Sequence derived from alignment at Contig_94:526421..528939- (Tribonema minus UTEX_B_3156 )
CTGCTGATGACGGTCACCGGCAAAGGCGGCCAGTGCGGCCTCTGCGACAA
CATCACGAGCCTGCTGCTGCACCTCGAGGACGGCTCGCCCGACGCCATAG
AGTGCTCTGCCATCTGCCTGTGGCGCTTCCAGAGGTGCATCAAGACGTGC
GAGCGCATCAAGCGCGCGCTGAGCGAGTCCTCGCACTACCCGTGCGTCGC
CGCGGGCATGTGCCCCGCGTCGGATGCGTACGGCGAGGTGAATCAGTGCT
CATACAGCTGGAAGCAGCGCTCTTGCCTCCCCGAGGGCCCCTGCTACATG
AAGCTGCGCTTCCCGCGCCCCTCGTGCCAACTCAAGCCCGGCTTCCTCGA
GTTCAACCACTACACGCAGGCGCTGCGGCGCAACACGGGCGCGCTCGCGC
GCGCGGTGCGCGAGCTGCCGCGCTGCGGTGAGCCGGGCGCGCACGCGACG
TTCTGCGTCAACGAGCCCACGGGCACGGGGTGGGCGGCGATGGTCGTCAG
CTACGCGCTCGTGTCGGTGGTCGGCGTGTGGCAGTCGGTCCGCGCCGTGG
AGACGCCCGGCGGCGACGACGACCGCCAGTGGCTCGCCTTCTGGATCATC
ATGTTCGGCTTCTTCACCCTCGAGCGCTTCGTGGACGTCCTCCTCAGCTG
GGCGCCGCACTACTACGAGGCCAAGCTCGCCGCCGTCCTGTACCTCATGT
TCGGCCGCGGCGCCGACCTCGTCTACCGCCGCGTCCACCGCGCCTTTGTC
AGCGCTCAGCGCCTG
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