mRNA_7988 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|351605 vs. uniprot
Match: A0A835YHH1_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHH1_9STRA) HSP 1 Score: 736 bits (1900), Expect = 3.020e-263 Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 1
Query: 1 MKGATWDDLLWKIKILVTIDFLAVAILVPLLSSYFRELNISTEKYGLMSSAYSLSQLVGGLLLGALSDHVVSRRTILLVSFLGSAVSYWLVGVSHSFALLLLSRVVVGLVKQTMTVCTAMLAEHMHGSEEKGGNRAQQMGRLSACATGAFVVGPIVGSFLYRRHKLLPPLASAALFLLNCALVLXXXXXXXXXXXXXXXXXXXXXXXXXXKRVTLRQRAFALARDLRSSCSLRPCFTVVAAKLANSFLAFAMDRSLVVESYALGYLRSYSTLVMLGAQVYLVGRLARSTSESTLAACAMAAIAAAAALEAAPIGLHAYLALALPLRLAAQGLLSTCLQTLFTRRMPRADLGAALGAMGVLQSASGVLAPLYGGALLRGAGARGRAAAAGAHYLAFAALWVAAEAWAGCSDGSGDGXXXXXXXXXXXXXXXXXXXXXXSVDGVVVAVNGGGVGRGGAGDRVKVE 1389
MKGATWDDLLWKIKILVTIDFLAVAILVPLLSSYFRELNISTEKYGLMSSAYSLSQLVGGLLLGALSDHVVSRRTILLVSFLGSAVSYWLVGVSHSFALLLLSRVVVGLVKQTMTVCTAMLAEHMHGSEEKGGNRAQQMGRLSACATGAFVVGPIVGSFLYRRHKLLPPLASAALFLLNCALVLXXXXXXXXXXXXXXXXXXXXXXXXXXKRVTLRQRAFALARDLRSSCSLRPCFTVVAAKLANSFLAFAMDRSLVVESYALGYLRSYSTLVMLGAQVYLVGRLARSTSESTLAACAMAAIAAAAALEAAPIGLHAYLALALPLRLAAQGLLSTCLQTLFTRRMPRADLGAALGAMGVLQSASGVLAPLYGGALLRGAGARGRAAAAGAHYLAFAALWVAAEAWAGCSDGSGDGXXXXXXXXXXXXXXXXXXXXXXSVDGVVVAVNGGGVGRGGAGDRVKVE
Sbjct: 1 MKGATWDDLLWKIKILVTIDFLAVAILVPLLSSYFRELNISTEKYGLMSSAYSLSQLVGGLLLGALSDHVVSRRTILLVSFLGSAVSYWLVGVSHSFALLLLSRVVVGLVKQTMTVCTAMLAEHMHGSEEKGGNRAQQMGRLSACATGAFVVGPIVGSFLYRRHKLLPPLASAALFLLNCALVLXXXXXXXXXXXXXXXXXXXXXXXXXXKRVTLRQRAFALARDLRSSCSLRPCFTVVAAKLANSFLAFAMDRSLVVESYALGYLRSYSTLVMLGAQVYLVGRLARSTSESTLAACAMAAIAAAAALEAAPIGLHAYLALALPLRLAAQGLLSTCLQTLFTRRMPRADLGAALGAMGVLQSASGVLAPLYGGALLRGAGARGRAAAAGAHYLAFAALWVAAEAWAGCSDGSGDGXXXXXXXXXXXXXXXXXXXXXXSVDGVVVAVNGGGVGRGGAGDRVKVE 463
BLAST of jgi.p|Trimin1|351605 vs. uniprot
Match: D8LQC9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQC9_ECTSI) HSP 1 Score: 269 bits (688), Expect = 8.800e-80 Identity = 191/446 (42.83%), Postives = 251/446 (56.28%), Query Frame = 1
Query: 37 IKILVTIDFLAVAILVPLLSSYFRELNISTEKYGLMSSAYSLSQLVGGLLLGALSDHVVSRRTILLVSFLGSAVSYWLVGVSHSFALLLLSRVVVGLVKQTMTVCTAMLAEHMHGSEEKGGNRAQQMGRLSACATGAFVVGPIVGSFLYRRHKLLPPLASAALFLLNCALVLXXXXXXXXXXXXXXXXXXXXXXXXXXKRV--------TLRQRAFAL------------------------ARDLRSSCSLRPCFTVVAAKLANSFLAFAM---------DRSLVVESYALGYLRSYSTLVMLGAQVYLVGRLARSTSESTLAACAMAAIAAAAALEAAP--IGLHAYLALALPLRLAAQGLLSTCLQTLFTRRMPRADLGAALGAMGVLQSASGVLAPLYGGALLRGAGARGRAAAAGAHYLAFAALWVAAEAWAGCSDGSGDG 1245
+K+L+ +D L+V ++VPLLSSYFR+LNISTE+YGLM SAYSLSQ+VGGL+LGALSD +SRRT+LL+SFLGSA+SY +G+S S +LL+ RVVVGLVKQT+T+ TA+++EH E R+ ++ +L A T A +VG GS LY++ K PPL + ALFLLN AL L XXX V TL AL + + +C P ++AAKL FL A+ + V S +LGY+ SY+ + Q+Y+VGRLA SE+ L A ++A +A E AP IG YLAL +P R A G L CLQ++FT+R+P+ DLGAALG + VL SASGV+AP YGG L+ G R AHY AF LW E G + G+G
Sbjct: 43 VKVLLFVDMLSVDLVVPLLSSYFRDLNISTEQYGLMFSAYSLSQIVGGLVLGALSDRALSRRTVLLISFLGSALSYGTIGLSSSLTMLLVGRVVVGLVKQTVTISTAIVSEHTAKEE-----RSAEISKLGAAMTFASIVGSACGSLLYQKRKTFPPLVACALFLLNAALALILLPSGNGREVGGWTDAAAGAKKXXXXIVNGSDNKDDTLTTATPALDGGVGKSAERGEDSSSFSSATRRFLANFKKACRSGPTLRILAAKLIFGFLFRALGSQNFVGYYEERFGVASASLGYMSSYTAGLSFFVQLYVVGRLASLASETHLVAMSLAVVALMNLAEGAPSIIGFWGYLALLIPARTVAHGTLQACLQSMFTQRVPQGDLGAALGVLNVLSSASGVVAPAYGGKLIGYLGILARPTVNAAHYAAFFVLWWVMEVARGRAPAEGEG 483
BLAST of jgi.p|Trimin1|351605 vs. uniprot
Match: A0A6H5K2J0_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J0_9PHAE) HSP 1 Score: 217 bits (552), Expect = 5.940e-60 Identity = 174/451 (38.58%), Postives = 227/451 (50.33%), Query Frame = 1
Query: 124 TEKYGLMSSAYSLSQLVGGLLLGALSDHVVSRRTILLVSFLGSAVSYWLVGVSHSFALLLLSRVVVGLVKQ----------------------------------TMTVCTAMLAEHMHGSEEKGGNRAQQMGRLSACATGAFVVGPIVGSFLYRRHKLLPPLASAALFLLNCALVLXXXXXXXXXXXXXXXXXXXXXXXXXXKRV--------TLRQRAFAL------------------------ARDLRSSCSLRPCFTVVAAKLANSFLAFAM---------DRSLVVESYALGYLRSYSTLVMLGAQVYLVGRLARSTSESTLAACAMAAIAAAAALEAAP--IGLHAYLALALPLRLAAQGLLSTCLQTLFTRRMPRADLGAALGAMGVLQSASGVLAPLYGGALLRGAGARGRAAAAGAHYLAFAALWVAAEAWAGCSDGSGDG 1245
TE+YGLMSSAYSLSQ+VGGL+LGALSD +SRR++LL+SFLGSA+SY +G+S S +LL+ RVVVGLVKQ T T+ TA+++EH E R+ ++ +L+A T + +VG GSFLY+R K LPPL + ALFLLN AL L XXXX TL AL + + +CS P ++AAKL F A+ + V S + GY+ SY+ + Q+Y+VGRLA SE+ L A ++A +A E AP IG YLAL +P R A G L CLQ++FT+R+P+ DLGAALG + VL SASGV+AP YGG L+ G R AHY AF LW E G + G+G
Sbjct: 39 TEQYGLMSSAYSLSQIVGGLVLGALSDRALSRRSVLLISFLGSALSYGTIGLSSSLTMLLVGRVVVGLVKQVDAWVRLLLNTRNYRLTCHHLPVIRLACALIPTQTQTISTAIVSEHTAKEE-----RSAELSKLTAAMTFSSIVGTACGSFLYQRSKTLPPLVACALFLLNAALALILLPSGNGREVGSWTDAAAGAKXXXXXXXXXXXXXXXTLTTATPALDGGAGKSAGRGMDSSSSSSATRRFLANFKKACSSGPTLRILAAKLIFDFFFRALGSQNFVGYYEERFGVASASRGYMSSYTAGLSFLVQLYVVGRLASLGSETHLVAMSLAVVAFMNFAEGAPSIIGFWGYLALLIPARTVAHGTLQACLQSMFTQRVPQGDLGAALGVLNVLSSASGVVAPAYGGKLIGYLGILARPTVNAAHYAAFFVLWWVMEVARGGAPAEGEG 484
BLAST of jgi.p|Trimin1|351605 vs. uniprot
Match: A0A7S3Y4E4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4E4_HETAK) HSP 1 Score: 201 bits (512), Expect = 2.310e-54 Identity = 156/424 (36.79%), Postives = 231/424 (54.48%), Query Frame = 1
Query: 13 TWDDLLWKIKILVTIDFLAVAILVPLLSSYFRELNISTEKYGLMSSAYSLSQLVGGLLLGALSDHVVSRRTILLVSFLGSAVSYWLVGVSHSFALLLLSRVVVGLVKQTMTVCTAMLAEHMHGSEEKGGNRAQQMGRLSACATGAFVVGPIVGSFLYRRHKLLPPLASAALFLLNCALVLXXXXXXXXXXXXXXXXXXXXXXXXXXKRVTLRQRAFALARD------------LRSSCSLRPCFTVVAAKLANSFLAFAM---DRSLVVESYAL-----GYLRSYSTLVMLGAQVYLVGRLARSTSESTLAACAMAAIAAAAALEAAP-IGLHAYLALALPLRLAAQGLLSTCLQTLFTRRMPRADLGAALGAMGVLQSASGVLAPLYGGALLRGA---GARGRAAAAGAHYLAFAALWVAAEA 1212
T L+ I++L ID L VA+L+PLL +YF+ + Y L S Y+ +Q++ GL L +D +SR+ +LLVSFLGSAVSY++VG + S +L+L+R++VGLVKQTMT+ TA++A+ G R +++GRL ++ AF+VGP +GSFLYR L P L ++++F+ N +LVL +R R R+ + D +++CS VV +LA +FLA ++ D E + L GY++SY V+L Q++LV +AR E+ L A+ + AA EA+P +G YL L +PL+ LL CL++LFT +P +LGAALG + VLQ+A GV+AP+YGG + A R A G HY A A + A A
Sbjct: 35 TSKRLMKLIELLEFIDLLGVAVLIPLLPAYFKSVGCGLGVYSLSRSVYNGAQVLSGLALSMQTDSKLSRKKLLLVSFLGSAVSYFMVGFAKSCTVLILTRLLVGLVKQTMTISTAIIADC-----SDRGRRVKELGRLGGASSLAFIVGPCIGSFLYRLSPLYPCLLASSVFIFN-SLVLSCLVPNGDVLNRSEEPEDMDG-----QRPRSRSRSVSKPLDPDATWWHTFCYNFKTTCSEPTVAWVVFVRLAFAFLARSLNANDMGYYEERFGLDLAHIGYIKSYQNAVVLLVQLFLVAPIARRADEAELTTLALGGLVAAHLFEASPSVGKWEYLTLCVPLKGLGTALLRVCLESLFTEAVPPGNLGAALGLLNVLQAAVGVVAPVYGGWVFAQADRMAVHRRPAVVGLHYAALTAFYAAVAA 447
BLAST of jgi.p|Trimin1|351605 vs. uniprot
Match: A0A6U6ADD0_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A6U6ADD0_GUITH) HSP 1 Score: 168 bits (426), Expect = 1.070e-42 Identity = 142/387 (36.69%), Postives = 207/387 (53.49%), Query Frame = 1
Query: 37 IKILVTIDFLAVAILVPLLSSYFRELNISTEKYGLMSSAYSLSQLVGGLLLGALSDHVVSRRTILLVSFLGSAVSYWLVGVSHSFAL---LLLSRVVVGLVKQTMTVCTAMLAEHMHGSEEKGGNRAQQMGRLSACATGAFVVGPIVGSFLYRR-HKLLPPLASAALFLLNCALVLXXXXXXXXXXXXXXXXXXXXXXXXXX-----KRVTLRQRAFALARDLRSSCSLRPCFTVVAAKLANSFLAFA---MDRSLVVESYAL-----GYLRSYSTLVMLGAQVYLVGRLARSTSESTLAACAMAAIAAAAALEAAPIGLHAYLALALPLRLAAQGLLSTCLQTLFTRRMPRADLGAALGAMGVLQSASGVLAPLYGGALLRGAGAR 1146
+K+ V +D + V + VPLL Y+REL + TE GL++S Y +SQ+V G++LG +SDH+ R+ ILL+SFLGSAVSY L G+S+ +L L+LSR +VGLVKQTMT+ A+ S +R + + L ACAT AF+VGP +G L + +K +P A+AALF+LN +V XXXXXXXXX ++ +R + + +R ++ K NS A V E Y L GYL SY +LV L +Q YLV +++ E A + LE + Y AL +P+R + L+S +TLFT +P+++ +A G +G+L++ + V PLYGG L G R
Sbjct: 24 LKLAVFLDMVGVGLYVPLLPFYWRELGVKTELLGLVASVYQISQIVSGVVLGYVSDHMSGRKNILLLSFLGSAVSYALAGLSYQNSLISTLVLSRFIVGLVKQTMTISRAITT-----SLTTDEDRTRSLSHLRACATLAFLVGPTMGGLLSKTFNKAVPAYAAAALFVLNALMVQIVLPNDISSHAHPAKEKXXXXXXXXXXXXXXRKTLVRSNSTGAVQGIRDLLEKEGLGSLTLIKFLNSVFVAACHVFSSKYVTEKYELEPHHMGYLSSYQSLVSLASQTYLVAAISKRFGEERTLQAAFLVSCMVSVLEGFSQHILIYAAL-IPIRTLSGDLISQMFETLFTSIVPKSEAASAFGTLGLLKAIARVGGPLYGGLLFAHVGTR 404
BLAST of jgi.p|Trimin1|351605 vs. uniprot
Match: A0A482SLV8_9ARCH (MFS transporter n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SLV8_9ARCH) HSP 1 Score: 164 bits (416), Expect = 1.940e-41 Identity = 140/401 (34.91%), Postives = 212/401 (52.87%), Query Frame = 1
Query: 25 LLWKIKILVTIDFLAVAILVPLLSSYFRELNISTEKYGLMSSAYSLSQLVGGLLLGALSDHVVSRRTILLVSFLGSAVSYWLVGVSHSFALLLLSRVVVGLVKQTMTVCTAMLAEHMHGSEEKGGNRAQQMGRLSACATGAFVVGPIVGSFLYRRHKLLPPLASAALFLLNCALV-LXXXXXXXXXXXXXXXXXXXXXXXXXXKRVTLR---QRAFALARDLRSSCSL-RPCFTVVAAKLANSFLAFAMDRSLVVESYALGYLRSYSTLVMLGAQVYLVG-RLARSTSESTLAACAMAAIAAAAALEAAPIGLHAYLALALPLRLAAQGLLSTCLQTLFTRRMPRADLGAALGAMGVLQSASGVLAPLYGGALLRGAGA---RGRAAAAGAHYLAFAALWV 1200
L+W +K+LV IDF AVA+++P+LSSYFR+ +S + YGL++S Y+ +QL+G L+LG LSD+ S++ ILL+SF GS +SY +VG+ ++ +LL SRVVVGLVKQTMT T M+AE +E+ R+ +MG+L+A ++ +FV+GP +G LY+ + +LP + A+F LN L L K V+L+ Q A+ L L R + A +++S L + VE+Y LG+L S +T++ L +Q LVG L E + A I A +E+ + +L +L T + + +P ++LG L + ++ S V APLYG L G +G AAA L ALWV
Sbjct: 4 LIW-LKVLVFIDFFAVALVLPILSSYFRDAGLSVQSYGLITSLYATAQLLGSLVLGVLSDYT-SKKGILLLSFAGSGLSYVMVGLGKNYIVLLASRVVVGLVKQTMTTTTLMIAEL---TEDNHAQRSIEMGQLAAISSFSFVIGPSIGGILYKYNSMLPASLAFAMFGLNFVLCYLVIPSDSESAVDSKQTKQDSIRAPFSFKLVSLQSLPQYAYTLLTSPGGIIFLFRQLISFTQASMSSSHLLNYYEERFGVETYDLGFLTSATTMMSLVSQSCLVGFALKLCKHEVIVIAVCFVVIGLANVIESINDDRYVIFVCSLLPSTLVSSVLDTASKAMLINSIPASNLGTMLSSANMVTSIVWVFAPLYGSYTLTALGDIRYKGLLAAAHDGVLVLIALWV 399
BLAST of jgi.p|Trimin1|351605 vs. uniprot
Match: A0A4D9CTX3_9STRA (MFS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTX3_9STRA) HSP 1 Score: 153 bits (386), Expect = 3.570e-36 Identity = 131/430 (30.47%), Postives = 202/430 (46.98%), Query Frame = 1
Query: 19 DDLLWKIKILVTIDFLAVAILVPLLSSYFRELNISTEKYGLMSSAYSLSQLVGGLLLGALSDHVVSRRTILLVSFLGSAVSYWLVGVSHSFALLLLSRVVVGLVKQTMTVCTAMLAEHMHGSEEKGGNRAQQMGRLSACATGAFVVGPIVGSFLYRRHKLLPPLASAALFLLNCALVLXXXXXXXXXXXXXXXXXXXXXXXXXX--------------KRVTLRQRAFALARDLRSSCSLRPCFTVVAAKLANSFLAFAM---------DRSLVVESYALGYLRSYSTLVMLGAQVYLVGRLARSTSESTLAACAMAAIAAAAALEAAPIGLH------------AYLALALPLRLAAQGLLSTCLQTLFTRRMPRADLGAALGAMGVLQSASGVLAPLYGGALLRGAGARGRAAAAGAHYLAFAAL-WV 1200
D + +K +V +DFLAVA +VPLL Y E+ +SSAYSL+QLVGG+LLG +SD +++R+TIL+ S LGSA +Y +VG S S LL+LSR+VVGLVKQTMT+ TA++++ R + M L+A T ++++GP +G +L+ LPPL +A +F L + L K + + F L + R + + +V+ +L SF ++ + ++S+ + YL SY + AQ +LV + R + S A +A + +G+ +L L P +A L LQ ++T +P GAALG+M LQS + APLYGG + + G R HY+ A + W+
Sbjct: 24 DTVSLYLKFIVALDFLAVATVVPLLPQYLARTGCCNEQLAFISSAYSLAQLVGGVLLGWVSDGIMTRKTILMTSLLGSAAAYGMVGASSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSR----RTKHMSHLTAAVTVSWILGPALGGYLFWLSPRLPPLVAAFIFTLAALVCLIGVPNHPDRGPPGYSPLSTSISSPDLLGMIGQGNGSQYKPKSKSFQAFLFTLKNNFREAFNDPTIIRIVSIRLLYSFTIISLMPTNFIGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVRHHTFSEEATARVAIV----------LGVFLKYSEVLNRDRLVFLFLTTPAIVAIFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKIAAPLYGGEIFQRVGHERRPEIIFFHYVVLATVVWL 439
BLAST of jgi.p|Trimin1|351605 vs. uniprot
Match: A0A6V2QNS2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2QNS2_9STRA) HSP 1 Score: 150 bits (378), Expect = 9.360e-36 Identity = 132/372 (35.48%), Postives = 191/372 (51.34%), Query Frame = 1
Query: 34 KIKILVTIDFLAVAILVPLLSSYFRELNI-STEKYGLMSSAYSLSQLVGGLLLGALSDH-VVSRRTILLVSFLGSAVSYWLVGVSHSFALLLLSRVVVGLVKQTMTVCTAMLAEHMHGSEEKGGNRAQQMGRLSACATGAFVVGPIVGSFLYRR-HKLLPPLASAALFLLNCALVLXXXXXXXXXXXXXXXXXXXXXXXXXXKRVTLRQRAFALARDLRSSCSLRPCFTVVAAKLANSFL----AFAMDRSLVVESYAL-----GYLRSYSTLVMLGAQVYLVGRLARSTSESTLAACAMAAIAAAAALEAAPIGLHAYLALALPLRLAAQGLLSTCLQTLFTRRMPRADLGAALGAMGVLQSASGVLAPLY 1113
+ +LV ID AVA++VPLL Y+R + S + L+SS +S SQ+ GGL++GALSD +SRR L +SF GSA SY L+ V L+ SRV+VGLVKQTMTV TA+LA H E RA Q+GRL+A +T A++VGP VG+ LY+ H P + + LF+LN + XXX + T + + +LRS S + ++V + L N ++ ++A S E Y + GYL SY + AQ LV L R AAC A + A L ++ + P+ + LL+ L++L T+ P+ +G+ L A+ VLQ+A+ V P Y
Sbjct: 56 SLPLLVMIDMFAVALVVPLLHQYYRTAGVTSANQRELLSSLFSSSQICGGLIIGALSDAGFLSRRNTLFLSFAGSAASYALI-VRGGLPSLVCSRVLVGLVKQTMTVTTALLARHTTAEE-----RAHQIGRLNASSTVAWIVGPSVGALLYKHIHHSAPAIVACCLFVLNSIIA--------AVFLPREEHNKNNSTSXXXTKSTAASKFTSFTSNLRSCFSSKSLASIVTSLLINYWVTRATSYASMASYYEEMYGIEPHQRGYLSSYQQFLSFLAQSMLVRPLLRFAGGERRAACLAALALSFATFSEIWSSLPIFVGVLCPIMSISVALLALSLRSLLTQVAPKDSIGSVLAALDVLQNAAAVTVPFY 413
BLAST of jgi.p|Trimin1|351605 vs. uniprot
Match: A0A7S3TJ13_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TJ13_9SPIT) HSP 1 Score: 149 bits (375), Expect = 1.100e-35 Identity = 125/378 (33.07%), Postives = 186/378 (49.21%), Query Frame = 1
Query: 49 VTIDFLAVAILVPLLSSYFRELNISTEKYGLMSSAYSLSQLVGGLLLGALSDHVVSRRTILLVSFLGSAVSYWLVGVSHSFALLLLSRVVVGLVKQTMTVCTAMLAEHMHGSEEKGGNRAQQMGRLSACATGAFVVGPIVGSFLYRRH-KLLPPLASAALFLLNCALVLXXXXXXXXXXXXXXXXXXXXXXXXXXKRVTLRQRAFALARDLRSSCSLRPCFTVVAAKLANSFLAFAMDRSLVVESYALGYLRSYSTLVMLGAQVYLVGRLARSTSESTLAACAMAAIAAAAALEAAPIGLHAYLALALPLRLAAQGLLSTCLQTLFTRRMPRADLGAALGAMGVLQSASGVLAPLYGGALLRGAGARGRAAAAGAHYL 1179
V +D+ VA++VP L F EL + E YG +SSAY+ SQL+GG+++G L D + R+ L +SFLG+ +SY VGVS S L++SRVVVGL KQT+T TA++ S +R Q +GRL++ T +F+VG G L +R+ + P +A LF LN LV R +L + AL R L F + + + S + + V G L SY+ ++ L + LVG+L ES L + A A++E + Y + LP+ + TCL ++F++ +P D+G AL + V SA V+APLYGG ++ G + A AHYL
Sbjct: 35 VYLDYCGVALVVPNLIFRFTELGGTPESYGFLSSAYAASQLIGGVIIGFLGDRRLGRKRALQLSFLGAGISYLTVGVSDSLFFLVVSRVVVGLTKQTLTCSTAIVT-----SLSDEASRTQALGRLTSITTFSFIVGQSAGGLLTQRYGRRAPCFVAATLFALNLCLV--EMLLPAVRIATRTQAPKERVYNHDRLRASLHRSKEAL-RGAGGRMLLLRLFYGLLMRSSYSMHSLYESQEWAVSPAISGTLASYNQILSLVIEWALVGKLVDRIPESRLLCICLVLSALNASMEYQHRYFYIYAGVHLPISAVVGRISRTCLSSIFSKAVPIEDIGVALSVLDVCNSAINVIAPLYGGLVIGKLGVAAQPLVASAHYL 404
BLAST of jgi.p|Trimin1|351605 vs. uniprot
Match: A0A7S4J471_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J471_9STRA) HSP 1 Score: 146 bits (368), Expect = 9.000e-35 Identity = 154/369 (41.73%), Postives = 208/369 (56.37%), Query Frame = 1
Query: 55 IDFLAVAILVPLLSSYFRELNISTEKYG-LMSSAYSLSQLVGGLLLGALSDHV-VSRRTILLVSFLGSAVSYWLVGVSHSFALLLLSRVVVGLVKQTMTVCTAMLAEHMHGSEEKGGNRAQQMGRLSACATGAFVVGPIVGSFLYRR-HKLLPPLASAALFLLN---CALVLXXXXXXXXXXXXXXXXXXXXXXXXXXKRVTLRQRAFA-LARDLRSSCSLRPCFTVVAAKLANSFLAFAMDRSLV---------VESYALGYLRSYSTLVMLGAQVYLVGRLARSTSESTLAACAMAAIAAAAALEAAPIGLHAYLALALPLRLAAQGLLSTCLQTLFTRRMPRADLGAALGAMGVLQSASGVLAPLY 1113
ID AV+++VPLL Y+R +S+ + L+SS YS SQ+VGGL+LG L+D +SRRT+L VSF GSA SY L+ V F L++SRVVVGLVKQTMTV TA++A H E R MGRLSA T A++VGP VG+ LY+ P + ++ LF+LN A L XXXXXXXXXXXXXXXXXXXXXXX FA A +L+S +VVA+ L S++ A + + +E + GYL SY L+ Q +V L + AACA A + A A L+ + + P+ + +L L++L T+ P+ +G+ L A+ VLQSA+ V P Y
Sbjct: 5 IDMFAVSLVVPLLHQYYRTAGVSSARQRELLSSLYSSSQIVGGLILGGLTDGGWMSRRTVLFVSFAGSAASYGLI-VRGGFRELVVSRVVVGLVKQTMTVTTALMARHTTAEE-----RPTHMGRLSASTTVAWIVGPSVGALLYKHVDPSAPAVCASLLFVLNSIVAAAFLPRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKFASFASNLKSCFGSANLGSVVASLLLFSWVTRATSYASMGSYYEELYGIEPHQRGYLSSYQQLLNFTVQSTMVRPLLKMAGGERRAACAGAVLLALATFLELRADLYLFAGVICPIVAVSVSMLGLSLRSLVTQVAPKESIGSVLAALDVLQSAANVTTPFY 367 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351605 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_7988 ID=mRNA_7988|Name=jgi.p|Trimin1|351605|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1738bp|location=Sequence derived from alignment at Contig_94:408241..411847+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAAGGGCGCCACGTGGGATGACCTGCTGTGGAAGATCAAGATCCTGGTback to top protein sequence of jgi.p|Trimin1|351605 >Trimin1|351605|estExt_Genemark1.C_Ctg_940077 ID=Trimin1|351605|estExt_Genemark1.C_Ctg_940077|Name=jgi.p|Trimin1|351605|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=464bp MKGATWDDLLWKIKILVTIDFLAVAILVPLLSSYFRELNISTEKYGLMSSback to top mRNA from alignment at Contig_94:408241..411847+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_7988 ID=mRNA_7988|Name=jgi.p|Trimin1|351605|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3607bp|location=Sequence derived from alignment at Contig_94:408241..411847+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_94:408241..411847+ >mRNA_7988 ID=mRNA_7988|Name=jgi.p|Trimin1|351605|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1392bp|location=Sequence derived from alignment at Contig_94:408241..411847+ (Tribonema minus UTEX_B_3156 )back to top |