mRNA_7987 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351604
Unique NamemRNA_7987
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|351604 vs. uniprot
Match: A0A835YH08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH08_9STRA)

HSP 1 Score: 578 bits (1489), Expect = 6.050e-206
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 1
Query:    1 MTAGDASGKKKQGVSGAGGNGSRQAHTGSADLTASSSSPRELNADEPTKIPEISDPEMSLTEDERLSLWEQLCSLEPAMQRALEAEDFSTAELLRDRISLLKAQDPYFALRESFETSLARDDYYSAAKCKLQLDRLGPPAALLERVSRGYNDVEMGPSVRAAVEAAQSALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVYSTRSEAVTHGVRVAVRAQYFPEQSDPARRQFVFVYRVRVTNESRATVQLAARRWLIRTLDAKTGRTAQQEVRGPGVVGQQPVLEPGQSFEYSSACPVVRGXXXXXXXXXXXXXXXXAALRVLGRMEGAFTMVTGAVGERGFEAKIEPFHLILPASFQQ 1086
            MTAGDASGKKKQGVSGAGGNGSRQAHTGSADLTASSSSPRELNADEPTKIPEISDPEMSLTEDERLSLWEQLCSLEPAMQRALEAEDFSTAELLRDRISLLKAQDPYFALRESFETSLARDDYYSAAKCKLQLDRLGPPAALLERVSRGYNDVEMGPSVRAAVEAAQSALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVYSTRSEAVTHGVRVAVRAQYFPEQSDPARRQFVFVYRVRVTNESRATVQLAARRWLIRTLDAKTGRTAQQEVRGPGVVGQQPVLEPGQSFEYSSACPVVRGXXXXXXXXXXXXXXXXAALRVLGRMEGAFTMVTGAVGERGFEAKIEPFHLILPASFQQ
Sbjct:    1 MTAGDASGKKKQGVSGAGGNGSRQAHTGSADLTASSSSPRELNADEPTKIPEISDPEMSLTEDERLSLWEQLCSLEPAMQRALEAEDFSTAELLRDRISLLKAQDPYFALRESFETSLARDDYYSAAKCKLQLDRLGPPAALLERVSRGYNDVEMGPSVRAAVEAAQSALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVYSTRSEAVTHGVRVAVRAQYFPEQSDPARRQFVFVYRVRVTNESRATVQLAARRWLIRTLDAKTGRTAQQEVRGPGVVGQQPVLEPGQSFEYSSACPVVRGXXXXXXXXXXXXXXXXAALRVLGRMEGAFTMVTGAVGERGFEAKIEPFHLILPASFQQ 362          
BLAST of jgi.p|Trimin1|351604 vs. uniprot
Match: A0A835ZBY5_9STRA (ApaG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBY5_9STRA)

HSP 1 Score: 356 bits (913), Expect = 6.390e-119
Identity = 221/318 (69.50%), Postives = 255/318 (80.19%), Query Frame = 1
Query:  124 LNADEPTKIPEISDPEMSLTEDERLSLWEQLCSLEPAMQRALEAEDFSTAELLRDRISLLKAQDPYFALRESFETSLARDDYYSAAKCKLQLDRLGPPAALLERVSRGYNDVEMGPSVRAAVEAAQSALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVYSTRSEAVTHGVRVAVRAQYFPEQSDPARRQFVFVYRVRVTNESRATVQLAARRWLIRTLDAKTGRTAQQEVRGPGVVGQQPVLEPGQSFEYSSACPVVRGXXXXXXXXXXXXXXXXAALRVLGRMEGAFTMVTGAVGERGFEAKIEPFHLILPAS 1077
            LN DEP ++PEI  PE+S+T +ER+ LWE++C+ EP +Q A+E +DF TAE LR+RI+ LKAQDPYFALRE+ +++LAR+DYYSAAK KLQLD+LGPP  +LE V+ G   V+M P++  AV AAQ    XXXXXXXXXXXXXXXXXXXXXXXXXXX    VYSTRSE  THGVRV VRAQYFPEQSDPA+ QFVFVYRVRVTN SRATVQLAARRW IRT +AKTG+TA QEV+GPGVVGQQPVLEPGQSFEYSSACPV +                  ++RVL RMEGAFTMVTGAVGERGFEAKI+PF+LILP S
Sbjct:   27 LNGDEPIQLPEIVAPELSMTAEERVVLWEEICASEPRLQLAIEEQDFGTAEQLRNRITALKAQDPYFALREAIDSALAREDYYSAAKFKLQLDKLGPPQTILESVANGSRRVDMSPTINQAVSAAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----VYSTRSETETHGVRVEVRAQYFPEQSDPAKAQFVFVYRVRVTNASRATVQLAARRWHIRTANAKTGKTAVQEVKGPGVVGQQPVLEPGQSFEYSSACPVFQRPRD--------------SVRVLARMEGAFTMVTGAVGERGFEAKIDPFYLILPES 326          
BLAST of jgi.p|Trimin1|351604 vs. uniprot
Match: H6WBA4_VAULI (ApaG domain-containing protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA4_VAULI)

HSP 1 Score: 238 bits (606), Expect = 1.460e-72
Identity = 140/321 (43.61%), Postives = 191/321 (59.50%), Query Frame = 1
Query:  112 SPRELNA-DEPTKIPEISDPEMSLTEDERLSLWEQLCSLEPAMQRALEAEDFSTAELLRDRISLLKAQDPYFALRESFETSLARDDYYSAAKCKLQLDRLGPPAALLERVSRGYNDVEMGPSVRAAVEAAQSALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVYSTRSEAVTHGVRVAVRAQYFPEQSDPARRQFVFVYRVRVTNESRATVQLAARRWLIRTLDAKTGRTAQQEVRGPGVVGQQPVLEPGQSFEYSSACPVVRGXXXXXXXXXXXXXXXXAALRVLGRMEGAFTMVTGAVGERGFEAKIEPFHLILP 1071
            SP +L A D P K+PEI  PEM +T  ERLSLWEQ+  LEP ++ A+E+ +   AELL+ +IS LKA +PYF L E  + +L + D+  AAK KLQ+D++G P   L+ V     +V+   +V+ AV +A  +                                IVYS +S   T+ V V V +QYF EQS+P + +++F+YRV +TN S  TVQL +R+W IRT++  T +T  QEV GPGVVGQQP+LEPGQ FEY+SACP+ +                   +RVLGRMEG + MVTG+ G+  F+AKI PF+LILP
Sbjct:   25 SPEKLIAYDTPIKLPEIEVPEMKMTSVERLSLWEQINVLEPELKNAVESGEKDYAELLKSKISDLKASEPYFTLHEKMKMALEKSDFSGAAKYKLQMDKIGVPKEFLDGVKNKTRNVDGSETVKQAVTSALMS-------KEASEAANQTEVQNSGTFVSEDGEQIVYSAKSMTSTNRVDVEVVSQYFREQSNPTKHRYIFLYRVAITNNSPFTVQLVSRKWQIRTINPNTNKTEVQEVSGPGVVGQQPILEPGQIFEYNSACPITQKPKDN--------------IRVLGRMEGCYLMVTGSNGQHYFQAKINPFYLILP 324          
BLAST of jgi.p|Trimin1|351604 vs. uniprot
Match: D7FX50_ECTSI (ApaG domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX50_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 7.580e-50
Identity = 112/310 (36.13%), Postives = 169/310 (54.52%), Query Frame = 1
Query:  145 KIPEISDPEMSLTEDERLSLWEQLCSLEPAMQRALEAEDFSTAELLRDRISLLKAQDPYFALRESFETSLARDDYYSAAKCKLQLDRLG-PPAALLERVSRGYNDVEMGPSVRAAVEAAQSALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVYSTRSEAVTHGVRVAVRAQYFPEQSDPARRQFVFVYRVRVTNESRATVQLAARRWLIRTLDAKTGRTAQQEVRGPGVVGQQPVLEPGQSFEYSSACPVVRGXXXXXXXXXXXXXXXXAALRVLGRMEGAFTMVTGAVGERGFEAKIEPFHLILP 1071
            ++P +  PEM ++E+ER  LW  +   E    +     +   AE  R R   ++ +DPY AL++  + ++  +++   A+ +LQ+ ++G PP A ++  + G +                SA+A                                YS++S   T+G+RV VR+QY+PEQS+P + Q++FVY+V++TN+S  TVQL +R W I+ ++A     A Q V+GPGVVGQQPVLEPGQSFEYSSACP+                      +VLGRM+G++ +V GAVGE  FEAKI+PF+LILP
Sbjct:  147 QLPTVEVPEM-MSEEERTRLWMGVSRAELQAVKLERQGETEEAEKFRQRAKEMRYEDPYTALQDELDEAIKNEEFVKIARLRLQMTKIGVPPNAEMQARAEGKDP---------------SAVAEETMKRMPGMSRGSEKSSRSGRRSDGSTETDGYSSKSVTTTNGIRVEVRSQYYPEQSNPLKDQYIFVYKVKITNQSSQTVQLVSRTWEIKAIEATE---APQLVKGPGVVGQQPVLEPGQSFEYSSACPIT--------------CAPKEGYQVLGRMKGSYLIVMGAVGEAAFEAKIDPFYLILP 423          
BLAST of jgi.p|Trimin1|351604 vs. uniprot
Match: A0A7S0MN03_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MN03_9CRYP)

HSP 1 Score: 145 bits (367), Expect = 4.390e-37
Identity = 102/321 (31.78%), Postives = 156/321 (48.60%), Query Frame = 1
Query:  109 SSPRELNADEPTKIPEISDPEMSLTEDERLSLWEQLCSLEPAMQRALEAEDFSTAELLRDRISLLKAQDPYFALRESFETSLARDDYYSAAKCKLQLDRLGPPAALLERVSRGYNDVEMGPSVRAAVEAAQSALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVYSTRSEAVTHGVRVAVRAQYFPEQSDPARRQFVFVYRVRVTNESRATVQLAARRWLIRTLDAKTGRTAQQEVRGPGVVGQQPVLEPGQSFEYSSACPVVRGXXXXXXXXXXXXXXXXAALRVLGRMEGAFTMVTGAVGERGFEAKIEPFHLILP 1071
            S+ R+ +A +    P I + EMS  +++R++LW ++  +E  +Q A+++E++S A  +RDRI  LK +DPY A ++  E S+A + Y  AA+ + +++ +G P     + S     V  G S     +   S                                       S+  T GVRV   + Y PEQS P+  +F+F Y + + N    T QL +R W IRT  A  G T  +EV G GVVG+QPVLEPG++F Y+SACP+                      R LG MEG++ MV G +G+  F  ++ PF  +LP
Sbjct:   64 SAERDPSAQQTGSGPVIGEVEMS--KEDRITLWAEVEEMETKLQEAIDSEEYSQAATIRDRIKSLKLRDPYAAAKDYMERSIAEEKYEEAARWRNKMNEVGEPPQKPGKGSSSVPYVGEGASPTGGSDGVSS---------------------------------------SDITTLGVRVQATSFYIPEQSSPSDGRFIFGYNITIFNGGSKTCQLVSRNWQIRT--APLGLT--EEVSGSGVVGRQPVLEPGEAFMYTSACPLAVDAEYLARLPPH---------RSLGSMEGSYLMVAGPLGQEVFAVRVAPFGFVLP 330          
BLAST of jgi.p|Trimin1|351604 vs. uniprot
Match: A0A7S4PNH5_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PNH5_GUITH)

HSP 1 Score: 133 bits (334), Expect = 4.750e-32
Identity = 99/308 (32.14%), Postives = 140/308 (45.45%), Query Frame = 1
Query:  172 MSLTEDERLSLWEQLCSLEPAMQRALEAEDFSTAELLRDRISLLKAQDPYFALRESFETSLARDDYYSAAKCKLQLDRLGPPAALLERVSRGYNDVEMGPSVRAAVEAAQSALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVYSTRSEAVTHGVRVAVRAQYFPEQSDPARRQFVFVYRVRVTNESRATVQLAARRWLIRTL----DAKTGRTAQQEVRGPGVVGQQPVLEPGQSFEYSSACPVVRGXXXXXXXXXXXXXXXXAALRVLGRMEGAFTMVTGAVGERGFEAKIEPFHLILPASFQ 1083
            M L+EDER  LWE++  L+  M  A+  E++S A  LRD I+ LK+ DPY                        ++  +G P  L ++  +              ++A + ALA                              +     S+ VT GVR+     Y P+ S P+  +F+F Y V +TN +  T QL +R WLI+T     D+KT     Q V G GV+G+QPVL P +SF YSS CP+                      RVLG MEG++ MVTGAVG+ GF+A I+PF+ ILP   +
Sbjct:  103 MCLSEDERRLLWEKIEDLDSEMNVAVSEENYSRAAELRDEIARLKSTDPYSNAEXXXXXXXXXXXXXXXXXXXKKMKEVGKPPVLHKKEKK--------------LQALELALATPITQPADS---------------------LGIKANSDTVTRGVRIQTVGFYLPDPSSPSDGRFMFGYNVTITNLNNETCQLLSRTWLIKTRVTPSDSKT-----QVVSGSGVIGRQPVLGPNESFTYSSLCPLSLDESYLRNLPQD---------RVLGSMEGSYLMVTGAVGQTGFQAIIDPFYFILPVDVE 361          
BLAST of jgi.p|Trimin1|351604 vs. uniprot
Match: A0A1I2H6N1_9GAMM (Protein ApaG n=1 Tax=Fontimonas thermophila TaxID=1076937 RepID=A0A1I2H6N1_9GAMM)

HSP 1 Score: 117 bits (292), Expect = 1.780e-28
Identity = 66/150 (44.00%), Postives = 86/150 (57.33%), Query Frame = 1
Query:  622 SEAVTHGVRVAVRAQYFPEQSDPARRQFVFVYRVRVTNESRATVQLAARRWLIRTLDAKTGRTAQQEVRGPGVVGQQPVLEPGQSFEYSSACPVVRGXXXXXXXXXXXXXXXXAALRVLGRMEGAFTMVTGAVGERGFEAKIEPFHLILP 1071
            SE +T GVR+ VR +Y PEQSDPA  Q++F Y + + NE   TVQL +R W+I       G    +EVRGPGVVG QPVL+PG+ F+Y+SACP+                        +G M G F M+  A GE GF+A+I PF L +P
Sbjct:    2 SETLTRGVRIIVRPRYVPEQSDPAAGQYLFAYHITIRNEGEDTVQLLSRHWVI-----TNGEGRIEEVRGPGVVGYQPVLKPGEEFQYTSACPLDTP---------------------VGTMHGEFQMILPATGE-GFDARINPFRLAVP 124          
BLAST of jgi.p|Trimin1|351604 vs. uniprot
Match: A0A7V8XSG4_9BACT (Protein ApaG n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V8XSG4_9BACT)

HSP 1 Score: 114 bits (285), Expect = 2.040e-27
Identity = 68/150 (45.33%), Postives = 88/150 (58.67%), Query Frame = 1
Query:  622 SEAVTHGVRVAVRAQYFPEQSDPARRQFVFVYRVRVTNESRATVQLAARRWLIRTLDAKTGRTAQQEVRGPGVVGQQPVLEPGQSFEYSSACPVVRGXXXXXXXXXXXXXXXXAALRVLGRMEGAFTMVTGAVGERGFEAKIEPFHLILP 1071
            SEAVT GVRV V +Q+ PE+S+P+R Q+ F+Y + + NE   TVQL  R W+I       G  A +EVRGPGVVG+QP+L+PG+SFEY+S CP+                         G MEG + MVT   GER F+AK+ PF L  P
Sbjct:    6 SEAVTRGVRVQVESQFDPERSEPSRNQWFFLYSITIANEGPDTVQLLTRHWII-----TDGTGAVEEVRGPGVVGKQPILKPGESFEYTSGCPLATA---------------------FGLMEGTYQMVTEG-GER-FDAKVAPFTLSEP 127          
BLAST of jgi.p|Trimin1|351604 vs. uniprot
Match: A0A1F2TEQ0_9BACT (Protein ApaG n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21 TaxID=1797191 RepID=A0A1F2TEQ0_9BACT)

HSP 1 Score: 114 bits (284), Expect = 2.690e-27
Identity = 65/150 (43.33%), Postives = 88/150 (58.67%), Query Frame = 1
Query:  622 SEAVTHGVRVAVRAQYFPEQSDPARRQFVFVYRVRVTNESRATVQLAARRWLIRTLDAKTGRTAQQEVRGPGVVGQQPVLEPGQSFEYSSACPVVRGXXXXXXXXXXXXXXXXAALRVLGRMEGAFTMVTGAVGERGFEAKIEPFHLILP 1071
            SEA+T GVRV V+++Y PE+SDPA  Q+ F+Y + + NE  ATVQL  R W++       G    +E+RGPGVVG+QP+L+PG+SFEY+S CP+                         G MEG + M+T   GER F+AK+ PF L  P
Sbjct:    4 SEAITRGVRVKVQSEYAPERSDPANNQWFFLYTITIANEGTATVQLLTRHWIV-----TDGAGHIEEIRGPGVVGEQPILKPGESFEYTSGCPLETP---------------------FGMMEGTYQMITEG-GER-FDAKVAPFTLSEP 125          
BLAST of jgi.p|Trimin1|351604 vs. uniprot
Match: A0A7W1PC87_9BACT (Protein ApaG n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7W1PC87_9BACT)

HSP 1 Score: 112 bits (279), Expect = 1.440e-26
Identity = 67/150 (44.67%), Postives = 88/150 (58.67%), Query Frame = 1
Query:  622 SEAVTHGVRVAVRAQYFPEQSDPARRQFVFVYRVRVTNESRATVQLAARRWLIRTLDAKTGRTAQQEVRGPGVVGQQPVLEPGQSFEYSSACPVVRGXXXXXXXXXXXXXXXXAALRVLGRMEGAFTMVTGAVGERGFEAKIEPFHLILP 1071
            SEAVT GV V V ++Y PE+S+P R ++ F+Y VR++NE    VQL  R W+I       G    +EVRGPGVVG+QP+L+PG+SFEY+S CP+                         G MEG + MVTG+ GER F+AK+ PF L  P
Sbjct:    4 SEAVTRGVHVYVESEYAPERSEPTRNEWFFLYTVRISNEGAEVVQLLTRHWVI-----TDGTGHVEEVRGPGVVGKQPILKPGESFEYTSGCPLSTP---------------------FGVMEGTYQMVTGS-GER-FDAKVAPFTLSEP 125          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351604 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YH08_9STRA6.050e-206100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZBY5_9STRA6.390e-11969.50ApaG domain-containing protein n=1 Tax=Tribonema m... [more]
H6WBA4_VAULI1.460e-7243.61ApaG domain-containing protein n=1 Tax=Vaucheria l... [more]
D7FX50_ECTSI7.580e-5036.13ApaG domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S0MN03_9CRYP4.390e-3731.78Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S4PNH5_GUITH4.750e-3232.14Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A1I2H6N1_9GAMM1.780e-2844.00Protein ApaG n=1 Tax=Fontimonas thermophila TaxID=... [more]
A0A7V8XSG4_9BACT2.040e-2745.33Protein ApaG n=1 Tax=Acidobacteria bacterium TaxID... [more]
A0A1F2TEQ0_9BACT2.690e-2743.33Protein ApaG n=1 Tax=Acidobacteria bacterium RIFCS... [more]
A0A7W1PC87_9BACT1.440e-2644.67Protein ApaG n=1 Tax=Acidobacteria bacterium TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_94contigContig_94:405579..407698 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351604|estExt_Genemark1.C_Ctg_940076
BRITEko00000
KEGG koko:K06195
Descriptionmitochondrion morphogenesis
COG categoryP
Max annot lvl2759|Eukaryota
EggNOG OGsCOG2967@1|root,KOG4408@2759|Eukaryota
Evalue1.24e-50
Seed ortholog2880.D7FX50
Hectar predicted targeting categoryother localisation
TranscriptId351926
TrackFilteredModels1
ProteinId351604
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351604gene_7987Tribonema minus UTEX_B_3156 geneContig_94 405579..407698 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351604Trimin1|351604|estExt_Genemark1.C_Ctg_940076Tribonema minus UTEX_B_3156 polypeptideContig_94 405579..407698 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7987_3exon_7987_3Tribonema minus UTEX_B_3156 exonContig_94 405579..406141 -
exon_7987_2exon_7987_2Tribonema minus UTEX_B_3156 exonContig_94 406737..406888 -
exon_7987_1exon_7987_1Tribonema minus UTEX_B_3156 exonContig_94 407325..407698 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7987CDS_7987Tribonema minus UTEX_B_3156 CDSContig_94 407325..407698 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7987 ID=mRNA_7987|Name=jgi.p|Trimin1|351604|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1089bp|location=Sequence derived from alignment at Contig_94:405579..407698- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACTGCTGGCGATGCGAGCGGGAAGAAAAAGCAGGGCGTCAGCGGCGC
AGGGGGAAATGGCAGCAGACAAGCACACACCGGCTCCGCGGACCTCACCG
CATCGTCCTCGTCCCCGCGCGAGCTTAATGCTGACGAGCCGACTAAGATA
CCTGAGATTTCAGATCCTGAGATGTCGCTGACGGAGGACGAGAGGCTTTC
TCTATGGGAGCAACTCTGTAGCCTTGAGCCAGCGATGCAGAGGGCGCTGG
AAGCCGAGGACTTCAGCACCGCGGAGCTGCTGCGTGACAGGATATCTTTG
CTCAAGGCGCAGGATCCCTACTTCGCGCTTCGCGAGTCTTTCGAAACATC
GCTGGCACGCGACGACTACTACAGCGCGGCCAAGTGTAAGCTGCAGCTGG
ACAGGCTGGGACCCCCGGCAGCATTGCTGGAGCGCGTCAGTCGCGGCTAC
AACGACGTTGAAATGGGCCCCTCCGTCAGGGCCGCAGTGGAGGCCGCGCA
GTCGGCGCTTGCAGCAGCCGCCGCAGAGGCACACCACGGCCGCGCGCCCG
CGAGCAGCGCCAGCAGCGGCGGCAGCAGCGACAGCGACGGCGCCGCCGCC
GCGATCGTCTACTCGACGCGCAGCGAGGCAGTCACGCACGGCGTGCGCGT
CGCCGTGCGCGCGCAGTACTTCCCGGAGCAGAGCGACCCGGCGCGGCGCC
AGTTCGTCTTTGTGTACCGCGTGCGCGTGACCAACGAGTCGCGCGCGACG
GTGCAGCTCGCGGCGCGCCGCTGGCTCATCCGCACACTCGACGCGAAGAC
GGGCAGGACCGCGCAGCAGGAGGTGCGCGGCCCGGGGGTCGTCGGCCAGC
AGCCGGTGCTGGAGCCCGGCCAGAGCTTCGAGTACAGCAGCGCGTGCCCC
GTCGTGCGCGGCGGCGGCGGTGGCGGCGGCGGCAGCGGCGGCGGCGGCGG
CGGCGGCGGCGCCGCGTTGCGCGTGCTCGGGCGCATGGAGGGGGCTTTCA
CCATGGTCACGGGGGCAGTGGGGGAGCGCGGCTTTGAGGCGAAGATCGAG
CCTTTCCACCTCATTCTGCCCGCGAGTTTTCAGCAGTAG
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protein sequence of jgi.p|Trimin1|351604

>Trimin1|351604|estExt_Genemark1.C_Ctg_940076 ID=Trimin1|351604|estExt_Genemark1.C_Ctg_940076|Name=jgi.p|Trimin1|351604|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=363bp
MTAGDASGKKKQGVSGAGGNGSRQAHTGSADLTASSSSPRELNADEPTKI
PEISDPEMSLTEDERLSLWEQLCSLEPAMQRALEAEDFSTAELLRDRISL
LKAQDPYFALRESFETSLARDDYYSAAKCKLQLDRLGPPAALLERVSRGY
NDVEMGPSVRAAVEAAQSALAAAAAEAHHGRAPASSASSGGSSDSDGAAA
AIVYSTRSEAVTHGVRVAVRAQYFPEQSDPARRQFVFVYRVRVTNESRAT
VQLAARRWLIRTLDAKTGRTAQQEVRGPGVVGQQPVLEPGQSFEYSSACP
VVRGGGGGGGGSGGGGGGGGAALRVLGRMEGAFTMVTGAVGERGFEAKIE
PFHLILPASFQQ*
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mRNA from alignment at Contig_94:405579..407698-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7987 ID=mRNA_7987|Name=jgi.p|Trimin1|351604|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2120bp|location=Sequence derived from alignment at Contig_94:405579..407698- (Tribonema minus UTEX_B_3156 )
ATGACTGCTGGCGATGCGAGCGGGAAGAAAAAGCAGGGCGTCAGCGGCGC AGGGGGAAATGGCAGCAGACAAGCACACACCGGCTCCGCGGACCTCACCG CATCGTCCTCGTCCCCGCGCGAGCTTAATGCTGACGAGCCGACTAAGATA CCTGAGATTTCAGATCCTGAGATGTCGCTGACGGAGGACGAGAGGCTTTC TCTATGGGAGCAACTCTGTAGCCTTGAGCCAGCGATGCAGAGGGCGCTGG AAGCCGAGGACTTCAGCACCGCGGAGCTGCTGCGTGACAGGATATCTTTG CTCAAGGCGCAGGATCCCTACTTCGCGCTTCGCGAGTCTTTCGAAACATC GCTGGCACGCGACGACTACTACAGGTGCAGTGACTGAGGCTCGGTTCTCG TCGTTCTGTGCTGATGCGCTTGTGAGAAAATGCTGGTGTACGTGATCTGT GCTGTGCAGATAATTCGGTCGATCTTCGCTCATCCTGAAAAGAGCATTCA AAACCAGCAGTTGTCTGTGGTGCGCCGCTGCAGCGCAGCACACCCCACAC AGCTTGCTGCACCATCGCGCTCGAGGTGACCGTCACGTGCATACTGTACC CATGAAATTTGCTCATCAAGCCATGTTTTGGACGTGAGAAGTGCTGCAGT GATTGACGTCAAGTTCGTTTACCAACAAGTGAGCTTTGGACTGCACGAAT TCTGATGTGAAGCTCCTCTTGTTCAAAATGAGATTCGTTTTTGGACGTCA GCAGTGTTGCAGTACATCTTACACCGCGCGTCTCTCCTCGCCTTGCTAAT GGCTGCACAGCGCGGCCAAGTGTAAGCTGCAGCTGGACAGGCTGGGACCC CCGGCAGCATTGCTGGAGCGCGTCAGTCGCGGCTACAACGACGTTGAAAT GGGCCCCTCCGTCAGGGCCGCAGTGGAGGCCGCGCAGTCGGCGCTTGCAG CAGCCGCCGCAGGTCAGCAGCGAGCTTGCTTCACGATGATGCCGACGTGG CAAGTGCGTAGCGCCCAGTGTTATGTTCATGTGCGTTGCTGCGAGTCAAA CGTTCTCTCGCGACGTCGACCGCAGCAAGTGCCTGTTATGCTCATATTCC TTGCTGCGAGTCAAGTGCCCTCTCGCGAAGTCGACCGCAGCACTTGCCTA GCACCCTGTTCATGTCCCTCGCTGCGAGTCAAATGCCCTCAAGGAGTCGA CAACAGCATGTACGAACGCAGCTGAAGTTTGAAACCTCAAGGTTCTTGGC CACCAGCCCTGCGCATATACACTTCCAAGGCACTGAATTCACCTGCTCCA CCAGGAGTGATGCACCTTGTTGCTTCATTGTTTGGCTGTCGCCCCCGTGC CAAACTTCACGTTCACCGCAGTGGCATCATGGCTGTGCGCTCGCCAGCAC AGACCCCCTACACAGCAGCGCTGGCACCATCACCCCCAGGTCTGCTTCCC GCACAGCAGCGTCACCACCCGTGCACTTCAAAGCCCCCCCCCCACCTTCA GCCAAGCTGACCGCCGTCACTCACATGTGCGCCCTATCCTCGCTCCTCCG CCACCAGAGGCACACCACGGCCGCGCGCCCGCGAGCAGCGCCAGCAGCGG CGGCAGCAGCGACAGCGACGGCGCCGCCGCCGCGATCGTCTACTCGACGC GCAGCGAGGCAGTCACGCACGGCGTGCGCGTCGCCGTGCGCGCGCAGTAC TTCCCGGAGCAGAGCGACCCGGCGCGGCGCCAGTTCGTCTTTGTGTACCG CGTGCGCGTGACCAACGAGTCGCGCGCGACGGTGCAGCTCGCGGCGCGCC GCTGGCTCATCCGCACACTCGACGCGAAGACGGGCAGGACCGCGCAGCAG GAGGTGCGCGGCCCGGGGGTCGTCGGCCAGCAGCCGGTGCTGGAGCCCGG CCAGAGCTTCGAGTACAGCAGCGCGTGCCCCGTCGTGCGCGGCGGCGGCG GTGGCGGCGGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGCCGCGTTG CGCGTGCTCGGGCGCATGGAGGGGGCTTTCACCATGGTCACGGGGGCAGT GGGGGAGCGCGGCTTTGAGGCGAAGATCGAGCCTTTCCACCTCATTCTGC CCGCGAGTTTTCAGCAGTAG
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Coding sequence (CDS) from alignment at Contig_94:405579..407698-

>mRNA_7987 ID=mRNA_7987|Name=jgi.p|Trimin1|351604|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1089bp|location=Sequence derived from alignment at Contig_94:405579..407698- (Tribonema minus UTEX_B_3156 )
ATGACTGCTGGCGATGCGAGCGGGAAGAAAAAGCAGGGCGTCAGCGGCGC
AGGGGGAAATGGCAGCAGACAAGCACACACCGGCTCCGCGGACCTCACCG
CATCGTCCTCGTCCCCGCGCGAGCTTAATGCTGACGAGCCGACTAAGATA
CCTGAGATTTCAGATCCTGAGATGTCGCTGACGGAGGACGAGAGGCTTTC
TCTATGGGAGCAACTCTGTAGCCTTGAGCCAGCGATGCAGAGGGCGCTGG
AAGCCGAGGACTTCAGCACCGCGGAGCTGCTGCGTGACAGGATATCTTTG
CTCAAGGCGCAGGATCCCTACTTCGCGCTTCGCGAGTCTTTCGAAACATC
GCTGGCACGCGACGACTACTACAGCGCGGCCAAGTGTAAGCTGCAGCTGG
ACAGGCTGGGACCCCCGGCAGCATTGCTGGAGCGCGTCAGTCGCGGCTAC
AACGACGTTGAAATGGGCCCCTCCGTCAGGGCCGCAGTGGAGGCCGCGCA
GTCGGCGCTTGCAGCAGCCGCCGCAGAGGCACACCACGGCCGCGCGCCCG
CGAGCAGCGCCAGCAGCGGCGGCAGCAGCGACAGCGACGGCGCCGCCGCC
GCGATCGTCTACTCGACGCGCAGCGAGGCAGTCACGCACGGCGTGCGCGT
CGCCGTGCGCGCGCAGTACTTCCCGGAGCAGAGCGACCCGGCGCGGCGCC
AGTTCGTCTTTGTGTACCGCGTGCGCGTGACCAACGAGTCGCGCGCGACG
GTGCAGCTCGCGGCGCGCCGCTGGCTCATCCGCACACTCGACGCGAAGAC
GGGCAGGACCGCGCAGCAGGAGGTGCGCGGCCCGGGGGTCGTCGGCCAGC
AGCCGGTGCTGGAGCCCGGCCAGAGCTTCGAGTACAGCAGCGCGTGCCCC
GTCGTGCGCGGCGGCGGCGGTGGCGGCGGCGGCAGCGGCGGCGGCGGCGG
CGGCGGCGGCGCCGCGTTGCGCGTGCTCGGGCGCATGGAGGGGGCTTTCA
CCATGGTCACGGGGGCAGTGGGGGAGCGCGGCTTTGAGGCGAAGATCGAG
CCTTTCCACCTCATTCTGCCCGCGAGTTTTCAGCAGTAG
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