mRNA_7932 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|138834
Unique NamemRNA_7932
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|138834 vs. uniprot
Match: A0A836C806_9STRA (VPS9 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C806_9STRA)

HSP 1 Score: 747 bits (1928), Expect = 1.690e-271
Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 1
Query:    1 PERRAALQAEARKTRVQWIEDARRISPDDAESEAREAIAGTCSDLARALPCALTLHDFLRVLGGDVPDAEVLSDILLPFALSEDGADSAKGDGPLPTHRPNRSSYDTLLDKLKHRLASEVVNNLEQFVFRFIELSRQQPPLQPPPSPHDSSTPTVAAAALRPQQHVAKIHAFLQRTAKTMREHMLWRGESEPQWADTVESLERLVMYKLYDVTFRLAADDARDAATALRLQSLSFVGFEHLDMAPLVSGAGASHADLDWSAPRAHLLRLDGLRSPGDKLACVLACFDAVADVLRRALGADDEDGSSXXXXXXXXXXXXXXREPGADELLPALIYLVKSTNPPRLASNLEYLQTFAAPERLVAGRASYALTQLASALHFLENADAGALSMDPEEFERRLGESR 1206
            PERRAALQAEARKTRVQWIEDARRISPDDAESEAREAIAGTCSDLARALPCALTLHDFLRVLGGDVPDAEVLSDILLPFALSEDGADSAKGDGPLPTHRPNRSSYDTLLDKLKHRLASEVVNNLEQFVFRFIELSRQQPPLQPPPSPHDSSTPTVAAAALRPQQHVAKIHAFLQRTAKTMREHMLWRGESEPQWADTVESLERLVMYKLYDVTFRLAADDARDAATALRLQSLSFVGFEHLDMAPLVSGAGASHADLDWSAPRAHLLRLDGLRSPGDKLACVLACFDAVADVLRRALGADDEDGSSXXXXXXXXXXXXXXREPGADELLPALIYLVKSTNPPRLASNLEYLQTFAAPERLVAGRASYALTQLASALHFLENADAGALSMDPEEFERRLGESR
Sbjct:    1 PERRAALQAEARKTRVQWIEDARRISPDDAESEAREAIAGTCSDLARALPCALTLHDFLRVLGGDVPDAEVLSDILLPFALSEDGADSAKGDGPLPTHRPNRSSYDTLLDKLKHRLASEVVNNLEQFVFRFIELSRQQPPLQPPPSPHDSSTPTVAAAALRPQQHVAKIHAFLQRTAKTMREHMLWRGESEPQWADTVESLERLVMYKLYDVTFRLAADDARDAATALRLQSLSFVGFEHLDMAPLVSGAGASHADLDWSAPRAHLLRLDGLRSPGDKLACVLACFDAVADVLRRALGADDEDGSSXXXXXXXXXXXXXXREPGADELLPALIYLVKSTNPPRLASNLEYLQTFAAPERLVAGRASYALTQLASALHFLENADAGALSMDPEEFERRLGESR 402          
BLAST of jgi.p|Trimin1|138834 vs. uniprot
Match: D8LL30_ECTSI (VPS9 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL30_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 4.340e-61
Identity = 168/447 (37.58%), Postives = 224/447 (50.11%), Query Frame = 1
Query:    7 RRAALQAEARKTRVQWIEDARRISPDDAESEARE------AIAGTCSD--LARALPCALTLHDFLRVLGGDVPDAEV--LSDILLPFALSE-DGADSAKGDGPLPTHRPNRSSYDTLLDKLKHRLASEVVNNLEQFVFRFIELSRQQPPLQPPPSPHDSSTPT------VAAAALRPQQHV-------------------------------AKIHAFLQRTAKTMREHMLWRGESEPQWADTVESLERLVMYKLYDVTFRLAADDARDAATALRLQSLSFVGFEHLDMAPLVSGAGASHADLDWSAPRAHLLRLDGLRSPGDKLACVLACFDAVADVL---RRALGADDEDGSSXXXXXXXXXXXXXXREPGADELLPALIYLVKSTNPPRLASNLEYLQTFAAPERLVAGRASYALTQLASALHFLENADAGALSMDPEEFERRL 1194
            RR  L AEAR+ RV W+E+AR I  DD    AR+      A +G  ++  L R  P A+  HDFL  L GD  ++    +S IL PF + + D  D    D P+P +R     +D  LDKL+H  A+EVV +L+QFV  F     + PP    P P  ++  +      V   A+R  +                                   +HAFL R    MRE  LWR E+E QW DT ESLER+VM+K++D  + LAAD  RD++ + RL+SL F+  EHL + PLV         L W+   A LL++  +R PGD L C++ C   VA +L   R A GA                       PGAD+ LPALI LVK  NPP L S LE++Q+F  P +L++  A Y LTQL SA+ FLE  DA  LS+   +FER L
Sbjct:   27 RRTELLAEARRKRVAWVEEARGI--DDGVDGARKRREDEAAASGRKAEGELERLFPSAVKFHDFLTGLAGDRDESPAGDMSAILQPFMIEDVDIGD----DRPIPAYREGSVPFDVFLDKLRHPRAAEVVKSLQQFVAAF-RARVEAPPALASPGPRGATAGSSNAFVGVPVPAVRNGREADTSPNGSAGATANXXXXXXXXXSGVTAVTMSGMMHAFLGRVEAQMRESALWRRETEAQWEDTRESLERIVMHKVFDQAYGLAADPGRDSSISTRLRSLGFLTEEHLGVPPLVDAQ--EDGALTWADAEAQLLKMSRMRCPGDMLRCIVKCTRIVAGLLTGDRAAGGA----------------------LPGADDFLPALILLVKRANPPGLHSTLEFVQSFRDPSKLLS-EAGYVLTQLVSAVCFLEEVDASVLSIAHGDFERGL 441          
BLAST of jgi.p|Trimin1|138834 vs. uniprot
Match: A0A482RZ75_9ARCH (VPS9 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZ75_9ARCH)

HSP 1 Score: 151 bits (381), Expect = 7.200e-38
Identity = 127/413 (30.75%), Postives = 207/413 (50.12%), Query Frame = 1
Query:   31 ARKTRVQWIEDARRISPDDAESEAREA-IAGTCSDLARALPCALTLHDFLRVLGGDVPDAEVLSDILLPFALSEDGADSAKGDGPLPTHRPNRSSYDTLLDKLKHRLASEVVNNLEQFVFRFIELSRQQPPLQPPPSPHDSSTPTVAAAAL-----RPQQHVAKIHA-----FLQRTAKTMREHMLWRGESEPQWADTVESLERLVMYKLYDVTFRLAADDA-RDAATALRLQSLSFVGFEHLDMAPL------VSGAGASHAD--LDWSAPRAHLLR-LDGLRSPGDKLACVLACFDAVADVLRRALGADDEDGSSXXXXXXXXXXXXXXREPGADELLPALIYLVKSTNPPRLASNLEYLQTFAAPERLVAGRASYALTQLASALHFLENADAGALSMDPEEFERRLGESR 1206
            ARK+R+ W+   R    D  E++   + IA + +  + +LP A  +   L  L   V D  ++    L   + ED  ++A  +        N SSYD  L KL H  A  VV +++QFV + I   R Q  ++   S  D+    + AA+L     R  +  AKI A     FL   A  MR ++LW  +++ ++    E+ E+ +  KL++  F + ++D  ++  T  R+ SLSF+  EHLD+         +S + ++H D  L   +P    L+ L+  +SP DK+ C+  C  ++A +LR  L  D+                     PGADELLP +I  +K  NPP L S +++LQ +  PE+L  G   Y LT   SA++FL++ +A AL+++PEEF+R + +S+
Sbjct:   24 ARKSRLFWVLQGR----DGLENKLSPSPIASSKAASSSSLPAAHAIQQVLDYLTDAVGDGNLIDVESLVLGMEEDVDETALLEAYKHPDNTNLSSYDLFLKKLIHPHAGPVVKSMQQFVAQQIAKIRDQR-MKATASTMDNINNILKAASLGKQNERDSEESAKIWANNIFKFLDHVADLMRTNILWAADTDGEFQIARENSEKFIFIKLHNHIFGVDSEDYHQNQQTQERIASLSFISAEHLDIKSFRVANSFLSPSSSTHTDPLLPILSPAVKFLQDLESAKSPADKMQCIRKCSASIAQILRD-LRTDNN-------------------LPGADELLPTMILTLKLCNPPMLHSQIKFLQRYTRPEKLT-GEGGYLLTNFVSAVYFLDHVNAQALTIEPEEFDRAIAQSK 410          
BLAST of jgi.p|Trimin1|138834 vs. uniprot
Match: A0A7S2W9D2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9D2_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.660e-34
Identity = 133/418 (31.82%), Postives = 195/418 (46.65%), Query Frame = 1
Query:    7 RRAALQAEARKTRVQWIEDARRISPDDAESEARE-------AIAGTCSDLARALPCALTLHDFLRVLGGDVPDAEVLSDILLPFALSEDGADSAKGDGPLPTH--RPNRSSYDTLLDKLKHRLASEVVNNLEQFVFRFIELSRQQPPLQPPPSPHDSSTPTVAAAALRPQQHVAKIHAFLQRTAKTMREHMLWRGESEPQWADTVESLERLVMYKLYDVTFRLAADDA-RDAATALRLQSLSFVGFEHLDMAPLVS------GAGASHADLD--WSAPRAHLLRLDGLRSPGDKLACVLACFDAVADVLRRALGADDEDGSSXXXXXXXXXXXXXXREPGADELLPALIYLVKSTNPPRLASNLEYLQTFAAPERLVAGRASYALTQLASALHFLENADAGALSMDPEEFERRLGESR 1206
            R+ +L  EAR+ R+ W+E AR  S   A+  A         A     +    ALP +  L  FL     D  +AE+++D           A + + D P+PTH   P+ +SY  LL+KLKH  A+EVV  +E+F+         Q   Q   S  D+ST                I AFL+R    MRE  LW  E++ QW  +  S+E  +  KL+ V F  + +   +D     RL+SL+F+   HLD+  L        G  ++ A  D  W      L ++     P  K+  V+ C  ++A VL  A+                       + PGAD+ LPA+I +VK  NP RL SNL ++QTFA   RL++  A Y  T L+SA+ FL++ DA AL++  EEFE  +  S+
Sbjct:   57 RKESLLIEARRKRISWVEAARDGSGLGADGHASHWHRVDPAAKMLESTKAGSALPSSPALVQFLADQL-DPTEAEIVAD-----------AHAVQSDIPIPTHDSMPDATSYQVLLEKLKHPSAAEVVKMMERFI--------DQMERQGVSSLDDAST---------------TISAFLERLHAQMRESPLWLSETDAQWDSSKVSVESFLFRKLHHVFFPSSPEAVEQDRDLERRLRSLAFIDAAHLDIKSLQQEYQSSMGQPSNEAREDEMWQESITCLRKMSAEYGPTAKIDQVVRCSKSIASVLTTAMRG---------------------KLPGADDFLPAMILVVKKANPSRLHSNLTFIQTFAPQHRLLS-EAGYIFTHLSSAVAFLQDVDANALTITSEEFEAGIQRSQ 417          
BLAST of jgi.p|Trimin1|138834 vs. uniprot
Match: A0A830HVP8_9CHLO (VPS9 domain-containing protein n=3 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HVP8_9CHLO)

HSP 1 Score: 128 bits (321), Expect = 1.170e-29
Identity = 92/286 (32.17%), Postives = 140/286 (48.95%), Query Frame = 1
Query:  310 SYDTLLDKLKHRLASEVVNNLEQFVFRFIELSRQQPPLQPPPSPHDSSTPTVAAAALRPQQHVAKIHAFLQRTAKTMREHMLWRGESEPQWADTVESLERLVMYKLYDVTFRLAADDAR-DAATALRLQSLSFVGFEHLDMAPLVSGAGASHADLDWSAPRAHLLRLDGLRSPGDKLACVLACFDAVADVLRRALGADDEDGSSXXXXXXXXXXXXXXREPGADELLPALIYLVKSTNPPRLASNLEYLQTFAAPERLVAGRASYALTQLASALHFLENADAGALS 1164
            ++ + L+K++   AS++V+ ++ F+  F                  + TP  A  + R Q        FL+ T    R H+LWR  S        E+LE+ +M KLY +TF ++ DD R DAA A + Q+L+F+  EHLD+ P          +  W   +  L + D  ++P DKL C L C   ++++LR A     E G+                 PGAD+  P L+Y+V    PPR+ SNLE++  F A  RLV+  A Y LT L SA+HF+E   + AL+
Sbjct:   29 TFASFLEKMRKPAASDLVSAIKHFIAAF-----------------HTGTPDPARDSRRLQD-------FLRTTEAAFRAHILWRNASADDLEAAGEALEKYIMTKLYPLTFAVSPDDTRRDAAIARKFQALAFLKPEHLDIPP------EHRVEASWLLAQKELCKCDSYKAPRDKLVCALNCCRIISNLLRVAA----EQGAP----------------PGADDFFPVLVYVVVRAAPPRIVSNLEFIARFRAENRLVS-EAEYFLTNLMSAVHFIETMRSEALT 263          
BLAST of jgi.p|Trimin1|138834 vs. uniprot
Match: C1MX54_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MX54_MICPC)

HSP 1 Score: 123 bits (309), Expect = 2.260e-27
Identity = 95/297 (31.99%), Postives = 139/297 (46.80%), Query Frame = 1
Query:  310 SYDTLLDKLKHRLASEVVNNLEQFVFRFIELSRQQPPLQPPPSPHDSSTPTVAAAALRPQQHVAKIHAFLQRTAKTMREHMLWRGESEPQWADTVESLERLVMYKLYDVTFRLAADD-ARDAATALRLQSL-SFVGFEHLDMAPLVSGAGASHADLDWSAPRAHLLRLDGLRSPGDKLACVLACFDAVADVLRRALGADDEDGSSXXXXXXXXXXXXXXREPGADELLPALIYLVKSTNPPRLASNLEYLQTFAAPERLVAGRASYALTQLASALHFLENADAGALS-MDPEEFERR 1191
            ++ + L+K++H  ASE+V +++ F+  F +                      AA A       A++  FL+ T +  R H  WRG S+ +   + E LE+ +M KLY  TF +A DD A D     R+ +L SFV  EHLD+          H+D  WS  R  L +++  ++P DKL CVL     V ++L    G                        PGAD+ LPALIY+V  +NP  L SN  ++  F    RL A  A+Y  T L SA  FL + DA A + ++ E F+ R
Sbjct:   16 TFQSFLEKMRHPSASELVKSIKGFIASFDD----------------------AAVARDSDADGARVQEFLRETERAFRGHPAWRGASQEELDASGEGLEKYLMTKLYPKTFAVAPDDVAADDFLGARVAALASFVRPEHLDIPTRF------HSDASWSLARNELCKMNNFKAPRDKLVCVLNTCRIVNNLLNATHGPTSP--------------------PGADDFLPALIYVVLRSNPAALESNARFISRFRLESRL-ASEAAYFFTNLQSATRFLSSCDASAFTGLEKEAFDAR 263          
BLAST of jgi.p|Trimin1|138834 vs. uniprot
Match: A0A5P1FBU5_ASPOF (VPS9 domain-containing protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FBU5_ASPOF)

HSP 1 Score: 122 bits (305), Expect = 2.610e-27
Identity = 94/322 (29.19%), Postives = 144/322 (44.72%), Query Frame = 1
Query:  247 EDGADSAKGDGPLPTHRPNRSSYDTLLDKLKHRLASEVVNNLEQFVFRFIELSRQQPPLQPPPSPHDSSTPTVAAAALRPQQHVAKIHAFLQRTAKTMREHMLWRGESEPQWADTVESLERLVMYKLYDVTFRLAADDARDAATALRLQSL--SFVGFEHLDMAPLVSGAGASHADLDWSAPRAHLLRLDGLRSPGDKLACVLACFDAVADVLRRALGADDEDGSSXXXXXXXXXXXXXXREPGADELLPALIYLVKSTNPPRLASNLEYLQTFAAPERLVAGRASYALTQLASALHFLENADAGALSMDPEEFERRLGESR 1206
            E+ + S+    PL  H          LD+++H  AS+ V +++ F+   + LS + P                      P++  A +  FL +     R HMLW G SE +     E LE+ VM KL++  F    +D           SL   F+  E+LD+ P      A   +  W   +  L +++  ++P DKL C+L C   + ++L     A  ED                   PGAD+ LP LIY+    NPP+L SNL Y+Q + +  RLV+   SY  T   S   F+ N DA +LSMD EEF++++  +R
Sbjct:    2 ENSSSSSNSSAPLAWH--------DFLDRMRHPSASDFVKSIKSFI---VSLSNKAPD---------------------PEKDSAAVQEFLAKMEGAFRAHMLWAGCSEEELESAGEGLEKYVMTKLFNRVFASLPEDVLSDEELFEKISLLQQFIRPENLDIKP------AFQNETSWLLAQKELQKINLYKAPRDKLICILNCCKVINNLLLNVSIASHED------------------PPGADDFLPVLIYVTIKANPPQLHSNLLYIQRYRSQSRLVS-EVSYYFTNFLSVESFIWNVDAASLSMDEEEFQKKMESAR 266          
BLAST of jgi.p|Trimin1|138834 vs. uniprot
Match: A0A4D9D3E4_9STRA (VPS9 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3E4_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.280e-26
Identity = 127/443 (28.67%), Postives = 195/443 (44.02%), Query Frame = 1
Query:    7 RRAALQAEARKTRVQWIEDARRISPDDAE-------------SEAREAIAGTCSD---LARALPCALTLHDFLRVLGGDVPDAEVLSD--ILLPFALSEDGAD------SAKGDGPLPTHRPNRS---SYDTLLDKLKHRLASEVVNNLEQFVFRFIELSRQQP--PLQPPPSPHDSSTPTVAAAALRPQ-QHVAKIHAFLQRTAKTMREHMLWRGES------------EPQWADTVESLERLVMYKLYDVTFRLAADDA---RDAATALRLQSLSFVGFEHLDMAPLVSGAGASHA----DLDWSAPRAHLLRLDGLRSPGDKLACVLACFDAVADVL--RRALGADDEDGSSXXXXXXXXXXXXXXREPGADELLPALIYLVKSTNPPRLASNLEYLQTFAAPERLVAGRASYALTQLASALHFLENADAGALSMDPEEF 1182
            RR  L  EAR+ R+ W+++   +  D  E              + + ++AG   +   LA  LP A     FL  + G+     V  D  +L   + ++DG         A+   PLP    + S   SYD  +  L H  ++E+V ++++FV  FI+   ++   P + PPSP   S+P       RPQ +H   +HAF+      + ++ +W G                 W +  E LE+ ++ KL+   F  A        +A    R+QSL+F+G EHL++  L+S +  S A     L++S   AH       ++P D +A +L C  A+   L   R  GA                       PGADE LPA+I  VK +NP  L   +  +Q +  P RL     +Y  T + SA+HFLE ADA  L+M PE F
Sbjct:   10 RRHDLLLEARRQRLSWLQNEDYVEMDVVEVFLAKQQEEQQQHGKEQGSLAGLFQEVPGLANVLPAAREYVGFLNEVAGEDDRDAVAYDPNVLQALSAAQDGETWWLEEAEAEPATPLPDESLDPSTPLSYDGFIRLLMHPGSAEIVKSMQRFVSAFIQSQERRKGLPARAPPSP---SSP-------RPQGEH---LHAFIDSLRGELCKNKVWSGRLTAGGGSRASGSWSAAWEEVREHLEKFLVIKLHRYLFTEAETQVLVKEEARWRARVQSLAFLGPEHLEVRSLLSSSSVSAALAPAILEFSRVPAH-------KAPADIMAGLLRCSQALTQALVSSRVAGAG---------------------LPGADEFLPAMILTVKESNPKNLRRAIHAVQRYRHPSRLQVAEPAYVFTNVLSAIHFLETADASQLNMTPESF 411          
BLAST of jgi.p|Trimin1|138834 vs. uniprot
Match: D8R0M8_SELML (VPS9 domain-containing protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R0M8_SELML)

HSP 1 Score: 119 bits (298), Expect = 5.110e-26
Identity = 88/303 (29.04%), Postives = 138/303 (45.54%), Query Frame = 1
Query:  304 RSSYDTLLDKLKHRLASEVVNNLEQFVFRFIELSRQQPPLQPPPSPHDSSTPTVAAAALRPQQHVAKIHAFLQRTAKTMREHMLWRGESEPQWADTVESLERLVMYKLYDVTFR-LAADDARDAATALRLQSLS-FVGFEHLDMAPLVSGAGASHADLDWSAPRAHLLRLDGLRSPGDKLACVLACFDAVADVLRRALGADDEDGSSXXXXXXXXXXXXXXREPGADELLPALIYLVKSTNPPRLASNLEYLQTFAAPERLVAGRASYALTQLASALHFLENADAGALSMDPEEFERRLGESR 1206
            + ++   L+++KH  A+++V +++ F+  F+             SP D            P    A    FL  T    R H LW G +E +  +  E LE+ VM K++   +  L +D  +D   + ++  L  F+  EHLD+            +  W      L +++  ++P DKL C+L C   + ++L  A                          PGA+E LPALIY+V   NPP+L SNL++++ +    RLVA  ASY  T L S   F+E  DA +LSMD  EFE R+  +R
Sbjct:   13 QQTFHDFLERMKHPSAADLVRSIKSFIVNFMS------------SPID------------PAMDSASAQDFLSTTEVAFRAHPLWAGATEEELENAAEGLEKYVMTKIFTRAYSPLPSDSLKDQELSDKISLLQHFIKPEHLDLPQSFQN------EASWLIAEKELQKINSYKAPRDKLVCILNCCRVINNLLLMAKSGTP---------------------PGAEEFLPALIYVVIKANPPQLHSNLQFIERYRHSSRLVA-EASYFYTSLVSVESFIEKLDAKSLSMDEAEFEERMQNAR 263          
BLAST of jgi.p|Trimin1|138834 vs. uniprot
Match: UPI001F5CEE48 (vacuolar protein sorting-associated protein 9A-like isoform X1 n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5CEE48)

HSP 1 Score: 117 bits (292), Expect = 6.630e-26
Identity = 81/246 (32.93%), Postives = 124/246 (50.41%), Query Frame = 1
Query:  463 VAAAALRPQQHVAKIHAFLQRTAKTMREHMLWRGESEPQWADTVESLERLVMYKLYDVTFRLAADDAR-DAATALRLQSLS-FVGFEHLDMAPLVSGAGASHADLDWSAPRAHLLRLDGLRSPGDKLACVLACFDAVADVLRRALGADDEDGSSXXXXXXXXXXXXXXREPGADELLPALIYLVKSTNPPRLASNLEYLQTFAAPERLVAGRASYALTQLASALHFLENADAGALSMDPEEFERRL 1194
            +A+ +L  +   A++ AF        REH LW   +  +    +E LE+ +M KL+D TF  +A+DA  DA  + R+  L  FV  EHLD+  ++      H +  W      L +++  +SP +KL CV++C   + ++L  A  ++D   S                  GADE LP LIY+    NPPRL SNL+++Q F    +LV+    Y LT L SA  F+ N D  +LSM+  EF+  +
Sbjct:   36 LASLSLDAEVDGARVQAFYAAMEAAFREHPLWANATHQEIDHALEGLEKYIMTKLFDRTFAASAEDAAADAEVSERIGLLQRFVRPEHLDIPKVL------HNEASWLLAVKELQKINSFKSPREKLLCVMSCCQVINNLLLNASMSNDRTPS------------------GADEFLPILIYITIKANPPRLHSNLKFVQLFRRETKLVS-EVEYYLTNLISAKMFIVNVDGHSLSMEDNEFQMHM 256          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|138834 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C806_9STRA1.690e-271100.00VPS9 domain-containing protein (Fragment) n=1 Tax=... [more]
D8LL30_ECTSI4.340e-6137.58VPS9 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A482RZ75_9ARCH7.200e-3830.75VPS9 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S2W9D2_9STRA2.660e-3431.82Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A830HVP8_9CHLO1.170e-2932.17VPS9 domain-containing protein n=3 Tax=Pycnococcus... [more]
C1MX54_MICPC2.260e-2731.99Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A5P1FBU5_ASPOF2.610e-2729.19VPS9 domain-containing protein n=1 Tax=Asparagus o... [more]
A0A4D9D3E4_9STRA1.280e-2628.67VPS9 domain-containing protein n=3 Tax=Monodopsida... [more]
D8R0M8_SELML5.110e-2629.04VPS9 domain-containing protein n=4 Tax=Selaginella... [more]
UPI001F5CEE486.630e-2632.93vacuolar protein sorting-associated protein 9A-lik... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_94contigContig_94:109656..110903 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|138834|gw1.94.57.1
BRITEko00000,ko04131
KEGG koko:K20131
GOsGO:0000011,GO:0003674,GO:0005085,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006605,GO:0006623,GO:0006810,GO:0006886,GO:0006892,GO:0006895,GO:0006996,GO:0007033,GO:0007034,GO:0008104,GO:0008150,GO:0009987,GO:0015031,GO:0015833,GO:0016043,GO:0016192,GO:0016197,GO:0016482,GO:0019899,GO:0032182,GO:0032509,GO:0032511,GO:0033036,GO:0033365,GO:0034613,GO:0036010,GO:0042886,GO:0043130,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0045324,GO:0046907,GO:0048193,GO:0048308,GO:0051020,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0065007,GO:0065009,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0098772
Preferred nameVPS9
Descriptionguanyl-nucleotide exchange factor activity
COG categoryGM
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0666@1|root,KOG2319@2759|Eukaryota
Evalue7.12e-62
Seed ortholog2880.D8LL30
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionVacuolar sorting protein 9
Ec32 orthologEc-26_003520.1
TranscriptId139156
TrackFilteredModels1
ProteinId138834
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|138834gene_7932Tribonema minus UTEX_B_3156 geneContig_94 109656..110903 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|138834Trimin1|138834|gw1.94.57.1Tribonema minus UTEX_B_3156 polypeptideContig_94 109656..110903 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7932_2exon_7932_2Tribonema minus UTEX_B_3156 exonContig_94 109656..110663 -
exon_7932_1exon_7932_1Tribonema minus UTEX_B_3156 exonContig_94 110706..110903 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7932CDS_7932Tribonema minus UTEX_B_3156 CDSContig_94 110706..110903 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7932 ID=mRNA_7932|Name=jgi.p|Trimin1|138834|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1206bp|location=Sequence derived from alignment at Contig_94:109656..110903- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CCAGAGAGACGTGCAGCTCTGCAGGCGGAGGCCCGCAAGACCCGCGTACA
GTGGATCGAGGATGCGAGGCGTATTTCTCCAGACGACGCGGAGTCAGAGG
CGCGAGAGGCTATAGCTGGTACCTGCAGCGATCTTGCAAGAGCGCTGCCC
TGCGCACTCACACTGCACGACTTCCTGAGAGTTTTGGGCGGCGATGTCCC
TGATGCCGAAGTGCTCTCCGACATCCTGCTACCGTTTGCTCTGAGCGAAG
ACGGTGCAGATTCTGCTAAGGGTGATGGGCCTCTCCCCACTCACAGACCG
AATCGAAGCTCATACGACACTCTGCTGGATAAGTTGAAACACCGGCTGGC
ATCCGAGGTCGTCAACAACCTGGAGCAGTTCGTCTTCCGGTTCATCGAGC
TCAGCAGGCAGCAGCCGCCGCTGCAGCCACCGCCATCACCACATGACAGC
AGCACACCCACCGTTGCTGCCGCGGCACTGCGACCGCAGCAGCACGTGGC
GAAAATCCACGCGTTCCTCCAGCGCACCGCCAAGACCATGCGCGAGCACA
TGCTGTGGCGCGGCGAGAGCGAGCCGCAGTGGGCAGACACTGTGGAGAGC
CTGGAGAGGCTCGTCATGTACAAACTCTACGACGTGACCTTCAGGCTCGC
CGCCGACGACGCGCGCGACGCGGCCACGGCGCTGCGCCTCCAGTCCCTCT
CCTTTGTGGGGTTTGAGCACCTGGACATGGCGCCGCTGGTCAGCGGCGCC
GGCGCCAGCCACGCCGACCTCGACTGGAGCGCGCCGCGCGCGCACCTGCT
GCGCCTCGACGGCCTGCGCTCCCCCGGCGACAAGCTCGCGTGCGTGCTGG
CGTGCTTCGACGCGGTGGCGGACGTGCTGCGGCGCGCGCTGGGCGCTGAT
GATGAGGACGGCAGCAGCGGCAGCGGCGGCGGCGGCAGCGGCAGCGGCGG
CGGCGGCGGCCGCGAGCCCGGCGCCGACGAGCTGCTGCCCGCGCTCATCT
ACCTCGTCAAGAGCACCAACCCGCCGCGCCTGGCCAGCAACCTGGAGTAC
CTGCAGACGTTCGCAGCGCCGGAGCGGCTCGTCGCGGGGCGCGCGAGCTA
CGCGCTCACGCAGCTGGCGTCCGCGCTGCACTTCCTGGAGAACGCGGACG
CGGGCGCGCTGTCCATGGACCCCGAGGAGTTTGAGCGGCGCCTCGGCGAG
AGCCGG
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protein sequence of jgi.p|Trimin1|138834

>Trimin1|138834|gw1.94.57.1 ID=Trimin1|138834|gw1.94.57.1|Name=jgi.p|Trimin1|138834|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=402bp
PERRAALQAEARKTRVQWIEDARRISPDDAESEAREAIAGTCSDLARALP
CALTLHDFLRVLGGDVPDAEVLSDILLPFALSEDGADSAKGDGPLPTHRP
NRSSYDTLLDKLKHRLASEVVNNLEQFVFRFIELSRQQPPLQPPPSPHDS
STPTVAAAALRPQQHVAKIHAFLQRTAKTMREHMLWRGESEPQWADTVES
LERLVMYKLYDVTFRLAADDARDAATALRLQSLSFVGFEHLDMAPLVSGA
GASHADLDWSAPRAHLLRLDGLRSPGDKLACVLACFDAVADVLRRALGAD
DEDGSSGSGGGGSGSGGGGGREPGADELLPALIYLVKSTNPPRLASNLEY
LQTFAAPERLVAGRASYALTQLASALHFLENADAGALSMDPEEFERRLGE
SR
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mRNA from alignment at Contig_94:109656..110903-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7932 ID=mRNA_7932|Name=jgi.p|Trimin1|138834|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1248bp|location=Sequence derived from alignment at Contig_94:109656..110903- (Tribonema minus UTEX_B_3156 )
CCAGAGAGACGTGCAGCTCTGCAGGCGGAGGCCCGCAAGACCCGCGTACA GTGGATCGAGGATGCGAGGCGTATTTCTCCAGACGACGCGGAGTCAGAGG CGCGAGAGGCTATAGCTGGTACCTGCAGCGATCTTGCAAGAGCGCTGCCC TGCGCACTCACACTGCACGACTTCCTGAGAGTTTTGGGCGGCGATGTCGT AGTCGAGCGCCAACATCAGCACAATCAGCAGCGGCAGCAGCCTGATGCCG AAGTGCTCTCCGACATCCTGCTACCGTTTGCTCTGAGCGAAGACGGTGCA GATTCTGCTAAGGGTGATGGGCCTCTCCCCACTCACAGACCGAATCGAAG CTCATACGACACTCTGCTGGATAAGTTGAAACACCGGCTGGCATCCGAGG TCGTCAACAACCTGGAGCAGTTCGTCTTCCGGTTCATCGAGCTCAGCAGG CAGCAGCCGCCGCTGCAGCCACCGCCATCACCACATGACAGCAGCACACC CACCGTTGCTGCCGCGGCACTGCGACCGCAGCAGCACGTGGCGAAAATCC ACGCGTTCCTCCAGCGCACCGCCAAGACCATGCGCGAGCACATGCTGTGG CGCGGCGAGAGCGAGCCGCAGTGGGCAGACACTGTGGAGAGCCTGGAGAG GCTCGTCATGTACAAACTCTACGACGTGACCTTCAGGCTCGCCGCCGACG ACGCGCGCGACGCGGCCACGGCGCTGCGCCTCCAGTCCCTCTCCTTTGTG GGGTTTGAGCACCTGGACATGGCGCCGCTGGTCAGCGGCGCCGGCGCCAG CCACGCCGACCTCGACTGGAGCGCGCCGCGCGCGCACCTGCTGCGCCTCG ACGGCCTGCGCTCCCCCGGCGACAAGCTCGCGTGCGTGCTGGCGTGCTTC GACGCGGTGGCGGACGTGCTGCGGCGCGCGCTGGGCGCTGATGATGAGGA CGGCAGCAGCGGCAGCGGCGGCGGCGGCAGCGGCAGCGGCGGCGGCGGCG GCCGCGAGCCCGGCGCCGACGAGCTGCTGCCCGCGCTCATCTACCTCGTC AAGAGCACCAACCCGCCGCGCCTGGCCAGCAACCTGGAGTACCTGCAGAC GTTCGCAGCGCCGGAGCGGCTCGTCGCGGGGCGCGCGAGCTACGCGCTCA CGCAGCTGGCGTCCGCGCTGCACTTCCTGGAGAACGCGGACGCGGGCGCG CTGTCCATGGACCCCGAGGAGTTTGAGCGGCGCCTCGGCGAGAGCCGG
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Coding sequence (CDS) from alignment at Contig_94:109656..110903-

>mRNA_7932 ID=mRNA_7932|Name=jgi.p|Trimin1|138834|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1206bp|location=Sequence derived from alignment at Contig_94:109656..110903- (Tribonema minus UTEX_B_3156 )
CCAGAGAGACGTGCAGCTCTGCAGGCGGAGGCCCGCAAGACCCGCGTACA
GTGGATCGAGGATGCGAGGCGTATTTCTCCAGACGACGCGGAGTCAGAGG
CGCGAGAGGCTATAGCTGGTACCTGCAGCGATCTTGCAAGAGCGCTGCCC
TGCGCACTCACACTGCACGACTTCCTGAGAGTTTTGGGCGGCGATGTCCC
TGATGCCGAAGTGCTCTCCGACATCCTGCTACCGTTTGCTCTGAGCGAAG
ACGGTGCAGATTCTGCTAAGGGTGATGGGCCTCTCCCCACTCACAGACCG
AATCGAAGCTCATACGACACTCTGCTGGATAAGTTGAAACACCGGCTGGC
ATCCGAGGTCGTCAACAACCTGGAGCAGTTCGTCTTCCGGTTCATCGAGC
TCAGCAGGCAGCAGCCGCCGCTGCAGCCACCGCCATCACCACATGACAGC
AGCACACCCACCGTTGCTGCCGCGGCACTGCGACCGCAGCAGCACGTGGC
GAAAATCCACGCGTTCCTCCAGCGCACCGCCAAGACCATGCGCGAGCACA
TGCTGTGGCGCGGCGAGAGCGAGCCGCAGTGGGCAGACACTGTGGAGAGC
CTGGAGAGGCTCGTCATGTACAAACTCTACGACGTGACCTTCAGGCTCGC
CGCCGACGACGCGCGCGACGCGGCCACGGCGCTGCGCCTCCAGTCCCTCT
CCTTTGTGGGGTTTGAGCACCTGGACATGGCGCCGCTGGTCAGCGGCGCC
GGCGCCAGCCACGCCGACCTCGACTGGAGCGCGCCGCGCGCGCACCTGCT
GCGCCTCGACGGCCTGCGCTCCCCCGGCGACAAGCTCGCGTGCGTGCTGG
CGTGCTTCGACGCGGTGGCGGACGTGCTGCGGCGCGCGCTGGGCGCTGAT
GATGAGGACGGCAGCAGCGGCAGCGGCGGCGGCGGCAGCGGCAGCGGCGG
CGGCGGCGGCCGCGAGCCCGGCGCCGACGAGCTGCTGCCCGCGCTCATCT
ACCTCGTCAAGAGCACCAACCCGCCGCGCCTGGCCAGCAACCTGGAGTAC
CTGCAGACGTTCGCAGCGCCGGAGCGGCTCGTCGCGGGGCGCGCGAGCTA
CGCGCTCACGCAGCTGGCGTCCGCGCTGCACTTCCTGGAGAACGCGGACG
CGGGCGCGCTGTCCATGGACCCCGAGGAGTTTGAGCGGCGCCTCGGCGAG
AGCCGG
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