mRNA_793 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: A0A836CH74_9STRA (FirrV-1-A48 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH74_9STRA) HSP 1 Score: 653 bits (1685), Expect = 2.190e-237 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 1 Query: 1 MCLLIIYKRHSIRRVIGLGSVGLPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLACPKFADGIQRVKTVKSTAEDICLEPNTVVFTSKQDVINRNIVNMKRALQRSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVAATDMTQMAYSSYSEYVNDPDRFNFLGSVKSAHT 945 MCLLIIYKRHSIRRVIGLGSVGLPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLACPKFADGIQRVKTVKSTAEDICLEPNTVVFTSKQDVINRNIVNMKRALQRSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVAATDMTQMAYSSYSEYVNDPDRFNFLGSVKSAHT Sbjct: 1 MCLLIIYKRHSIRRVIGLGSVGLPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLACPKFADGIQRVKTVKSTAEDICLEPNTVVFTSKQDVINRNIVNMKRALQRSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVAATDMTQMAYSSYSEYVNDPDRFNFLGSVKSAHT 315
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: A0A835Z8B2_9STRA (Putative cysteine protease n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8B2_9STRA) HSP 1 Score: 384 bits (985), Expect = 1.760e-130 Identity = 176/314 (56.05%), Postives = 234/314 (74.52%), Query Frame = 1 Query: 1 MCLLIIYKRHSIRRVIGLGSVGLPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLACPKFADGIQRVKTVKSTAEDICLEPNTVVFTSKQDVINRNIVNMKRALQRSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVAATDMTQMAYSSYSEYVNDPDRFNFLGSVKSAH 942 + LL I +R V LP+YFKW+E++L+PVRNQ+GCA+CW++SVCDM++D++NL++GG +G N LS QYL+SC+ GH GC+ G SPE YDLPQLT+ GIPLE FPY A+DT C +G+ RV+TVK+T D+C++P TV +Q VI+ NIV MK+AL PIVGTLRVH D+Y YDG +IY VTPGS IGYHAV +VG+A+ N EPGF + YWV +SSWG++WGA+ G + GF YVKMG NEADIESRAS C+V +P+ +KDA+AATD+ M Y+SY++YV DP+R +F+G++ H Sbjct: 20 LTLLYINRRRIYTAVAAAAPDDLPTYFKWKERFLVPVRNQKGCAACWALSVCDMMSDTINLRSGGQWGRNHLSPQYLISCWSGHEGCNTGGSPEGTYDLPQLTDAGIPLEEEFPYVATDTAPCKAITEGVLRVRTVKNTGRDLCIDPATVPENVRQQVIDANIVRMKKALLNGPIVGTLRVHEDLYKYDGLAIYQVTPGSRQIGYHAVEVVGWANEEVNFAEPGFDDAYWVVRSSWGDNWGAR-GIRYGFAYVKMGCNEADIESRASVCEVEMPESVKDAIAATDIDTMRYTSYTQYVEDPERSHFVGAMVKNH 332
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: A0A835YX55_9STRA (Putative cysteine protease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX55_9STRA) HSP 1 Score: 307 bits (786), Expect = 3.410e-100 Identity = 153/308 (49.68%), Postives = 198/308 (64.29%), Query Frame = 1 Query: 19 YKRHSIRRVIGLGSVGLPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLACPKFADGIQRVKTVKSTAEDICLEPNTVVFTSKQDVINRNIVNMKRAL-QRSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVAATDMTQMAYSSYSEYVNDPDRFNFLGSVKSA 939 Y+ S + LPSY K++EK+LMPVR+QR CA+CWS SV DM+AD+LN +T GA+G PLS+QYLLSC H GC++G SPE+VYDLPQLT+ G PL++ PY+ +T C + RV+TV +TA +C +P+ + ++ I RN+ NMKRAL Q PIVGTLRV D+Y Y G I+ P S GYHAV IVG+ D N N EPGF YW+ +SSWG WG G + G+ YV MG N ADIESRAS C V P L++ T + Y SY YV+DP+R NF+G +K+A Sbjct: 27 YRSASFATPVADDGAPLPSYLKYKEKFLMPVRDQRCCAACWSFSVADMMADTLNAQTAGAFGKRPLSAQYLLSCSSAHRGCEVGGSPEDVYDLPQLTDAGCPLDADLPYEGKET-PCRPLPPDVLRVRTVPNTAVSLCDDPDRALPGTRAATIRRNVRNMKRALLQYGPIVGTLRVTGDLYAYRGDGIFRGDPASKFYGYHAVEIVGWCDENVNWAEPGFDGAYWIVRSSWGFDWGVPKGMRYGWAYVTMGENCADIESRASVCRVEFPMALEEVRRRTPTSAARYESYEHYVDDPERENFIGGLKTA 333
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: A0A836CER7_9STRA (FirrV-1-A48 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CER7_9STRA) HSP 1 Score: 295 bits (756), Expect = 8.790e-96 Identity = 147/308 (47.73%), Postives = 199/308 (64.61%), Query Frame = 1 Query: 13 IIYKRHSIRRVIGLGSVGLPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLACPKFADGIQRVKTVKSTAEDICLEPNTVVFTSKQDVINRNIVNMKRALQR-SPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGF-SEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVAATDMTQMAYSSYSEYVNDPDRFNFLGSV 930 I Y+ S +I L + LPSY K++E+WLMPVR+Q CA+CWS SV DM+AD+LN+ T G YG PLS+QYLLSC + H GCD+G SPE VY+LPQ+T+ G PL++ PY+ T C + RV+T+K+TA D+C +P+ + ++ I RN+ NMKRAL PIVGT+RV D+Y Y IY P S L+GYHA+ I+G+ N EPGF S +W+ +SSWG WG G GF +++MG N DIESRAS C V P EL T +T++ Y SY++Y +DP+R NF+ +V Sbjct: 18 IAYRVSSRASIIPL-TAALPSYLKYKERWLMPVRDQGPCAACWSYSVVDMMADTLNVWTAGGYGKRPLSAQYLLSCSKAHEGCDVGGSPEAVYNLPQMTDVGCPLDADLPYEGKVT-ECKQLPPDAFRVRTIKNTAVDLCDDPSLALPGTRGATIKRNVENMKRALMAYGPIVGTIRVTEDLYAYKADGIYRGDPTSKLVGYHAIEIIGWCCEAVNIREPGFDSPAFWICRSSWGVYWGVPPGVSSGFAFIEMGANVCDIESRASVCRVNFPKELAAIAKKTPLTEVRYESYTDYADDPERQNFIDAV 323
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: A0A836CC90_9STRA (Pept_C1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC90_9STRA) HSP 1 Score: 272 bits (696), Expect = 2.300e-86 Identity = 146/311 (46.95%), Postives = 189/311 (60.77%), Query Frame = 1 Query: 34 IRRVIGLG-SVGLPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGHL-GCDIGDSPENVYDLPQLTEQG--IPLESAFPYQASD---TLACPKFADGIQRVKTVKSTAEDICLEPNTVVFTSKQDVINRNIVNMKRALQR-SPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVAATDMTQMAYSSYSEYVNDPDRFNFLGSVKSAH 942 I R+ G S LPSYFK+ E L P R+Q GCASCW+ +VCDM AD+LNL+T GA+G+ PLS QYLLSC G C+ G PE + P T +G IPLES PY+A + + + + G RV+ ++ +C +P+ + + + RN+ NMKRA+ R P+VGTLRV D+Y+Y IY P S +GYHAVLIVG+ DA N+ EPGF YWV KSSWG WG +G + G+ YV MG N A++ESRAS V+PD +A T AY SY +Y DPDR NFLG+V AH Sbjct: 39 IPRLFGASASEPLPSYFKYHEALLNPPRDQLGCASCWAFAVCDMAADALNLRTEGAWGVRPLSPQYLLSCAPGLTQSCEEGGIPEEALESPAATSEGGGIPLESEVPYRADEGPCAASSARPSPGGVRVRIAPGSSLSLCDDPSLALPGMRGATVKRNVANMKRAIMRHGPVVGTLRVTEDLYDYAASEIYRQDPASAFVGYHAVLIVGWCDARVNSAEPGFDGAYWVIKSSWGQHWGVPEGVRSGYAYVAMGENIAEVESRASVATAVLPDGFAEAEGWQKRT--AYWSYDDYARDPDRDNFLGAVARAH 347
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: B5LWL5_9PHYC (Putative cysteine protease n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWL5_9PHYC) HSP 1 Score: 192 bits (488), Expect = 3.650e-55 Identity = 118/292 (40.41%), Postives = 164/292 (56.16%), Query Frame = 1 Query: 67 LPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGH--LGCDIGDSPENVYDLPQLTEQGIPLESAFPYQAS---DTLAC-PKFADGIQRVKTVKSTAEDICLEPNTVVFTS--KQDVINRNIVNMKRAL-QRSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSE--GYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVAATDMTQMAYSSYSEYVNDPDR 909 LPSY K++E+ L PV +Q CASCWSISV MLAD +++ TGG LS Q ++SC+ GH L C G PE Y + E GI ++ +PY+ S D C P G R+ S+ +C++P +S ++ VI+ NI NMK+ L P V T+ V+ ++Y+YDG S+Y S +G H+V+ VGY D N EPGF GYWV ++SW + W + G+ Y++ G N IESRASR VV DE+ + A + + Y SY+ YVNDPDR Sbjct: 60 LPSYLKYKERLLTPVVDQGKCASCWSISVVQMLADRVSVYTGGKVRKR-LSVQEMISCWDGHDGLACSKGGVPEEAYQY--IVENGIGMDEDYPYEQSNSDDIRPCVPSRLKG-PRLYVQGSSVRSLCIDPYEYEQSSGERRGVIDMNICNMKKELLMNGPFVCTIMVYQNLYDYDGLSVYQGHDDSEFVGGHSVVCVGYCDEGINGVEPGFDVPGGYWVIRNSW-SDWPLKSPASEGYFYIQKGSNVCGIESRASRALVVPTDEILNNTVAN-LNESRYVSYTSYVNDPDR 345
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: Q6XM39_9PHYC (FirrV-1-A48 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM39_9PHYC) HSP 1 Score: 191 bits (485), Expect = 1.350e-54 Identity = 120/310 (38.71%), Postives = 168/310 (54.19%), Query Frame = 1 Query: 46 IGLGSVG---LPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGH--LGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLA---CPKFADGIQRVKTVKSTAEDICLEPNTVVFTSK--QDVINRNIVNMKRALQ-RSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSE--GYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVA--ATDMTQMAYSSYSEYVNDPDRFNFLGSV 930 I LG V LPSY K++E+ L P +Q CASCWSISV MLAD +++ T G L LS Q ++SC+ GH L C G PE Y + E GI L +PY+ + + C + R+ + + +CL+P + S+ Q VI+ NI NMK L P V T+ V+ ++Y+YDG S+Y G+ +G H+V +GY D N EPGF GYWV K+SW + W +G+ Y+K G N IESRAS +V PD+ +D A D+ + Y +YS YVNDP+R ++ V Sbjct: 54 IDLGQVATSDLPSYLKYKERLLAPSIDQGSCASCWSISVVQMLADRVSVSTNGKIKLK-LSVQEMISCWDGHDGLACSKGGVPEKAYQY--IIENGIGLAEDYPYEQNHSTVIGGCDRQRLDGYRLYILPDSVRSLCLDPYQLPQGSREYQKVIDTNIRNMKHELLLHGPFVCTIMVYQNLYDYDGLSVYEGHEGTEFVGGHSVTCIGYCDEGINGEEPGFDVPGGYWVIKNSW-SDWPLHSPASQGYFYIKKGSNVCGIESRASSA-LVDPDQGEDIRANIIADLNESRYMTYSSYVNDPERQLYVTRV 358
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: Q54IS1_DICDI (Pept_C1 domain-containing protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54IS1_DICDI) HSP 1 Score: 108 bits (269), Expect = 1.330e-23 Identity = 83/265 (31.32%), Postives = 125/265 (47.17%), Query Frame = 1 Query: 55 GSVGLPSYFKWREKW---LMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSC-YRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASD--TLACPKFADGIQRVKTVKSTAEDICL---EPNTVVFTSKQDVINRNIVNMKRALQRSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYA-DANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVV 819 GS+ P+ F R +W + P+ NQ C SCW+ S ++L+D L + + LS Q L++C G+ GC G P+ ++ +L +G+P +S PY A + +C + S +ED L +P T+ S I NI L PIVGT+ V+ D +Y +Y +TPGS L+G HA+ IVG+ D + + YW+ +SWG WG Q GF ++ M I S AS + V Sbjct: 86 GSI--PTSFDSRVQWPDCIHPILNQEQCGSCWAFSSSEVLSDRLCIASNNKTNPGALSPQTLVACDVYGNDGCS-GGIPQLAWEYMEL--KGLPTDSCVPYTAGNGTVYSCQRSC----------SDSEDYSLYRAKPFTLKTCSSVQCIQENI------LAYGPIVGTMEVYEDFMSYS-SGVYVMTPGSSLLGGHAIKIVGWGFDQTSQLN-------YWIVANSWGADWGQQ-----GFFFISM--ETCSISSDASAAEARV 314
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: F1A5T9_DICPU (Pept_C1 domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A5T9_DICPU) HSP 1 Score: 106 bits (265), Expect = 1.650e-23 Identity = 81/250 (32.40%), Postives = 125/250 (50.00%), Query Frame = 1 Query: 58 SVG-LPSYFKWREKW---LMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSC-YRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLACPKFADGIQRVKTVKSTAEDICL---EPNTVVFTSKQDVINRNIVNMKRALQRSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGFIYV---KMGVN 774 SVG +P F R +W + P+ NQ C SCW+ S ++L+D L + + G G+ LS Q L+SC G+ GC+ G P+ ++ +L GIP FPY + + DG VK E L +P T+ + + I ++I+ PI GT+ V+ D +Y +YT+TPGS L+G HA+ IVG+ A+ ++ YW+ +SWG SWG GF ++ + G+N Sbjct: 27 SVGSIPQSFDARTQWPNCIHPILNQEQCGSCWAFSASEVLSDRLCIASNGKTGV-VLSPQALVSCDIFGNQGCN-GGIPQLAWEYMEL--HGIPTYGCFPYTSGNG------TDG-SCVKNSCVDNEQYTLYRAKPLTLKTCASVECIQQDIMKF------GPIQGTMEVYSDFMSYT-SGVYTMTPGSSLLGGHAIKIVGWGFDQAS------NQNYWIVANSWGPSWGID-----GFFWIAFDQCGIN 247
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: D3BV74_POLPP (Pept_C1 domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BV74_POLPP) HSP 1 Score: 107 bits (266), Expect = 3.380e-23 Identity = 76/258 (29.46%), Postives = 122/258 (47.29%), Query Frame = 1 Query: 46 IGLGSVGLPSYFKWREKW---LMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSC-YRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLA--CPKFADGIQRVKTVKSTAEDICLEPNTVVFTSKQDVINRNIVNMKRALQRSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRAS 801 + + V +P+ F R W + V NQ C SCW+ + + L+D L + + GA + LS Q L+SC + GC+ G P+ ++ +L GIP +S FPY + + A C K + + K + T+ S I N+ PI GT+ V+ D +Y +Y +TPGS L+G HA+ IVG+ + + + YW+ ++SWG+ WG GF +++ G N I+ AS Sbjct: 74 VSVSKVAVPNSFDSRTNWPGCVHAVLNQGQCGSCWAFAASESLSDRLCIASQGAINVT-LSPQALVSCDIEFNQGCN-GGIPQMAWEYLEL--HGIPTDSCFPYTSGNGTAPDCQKECSDGSKYQLYKG-------KTFTLKTCSSVAAIQANV------FAYGPIEGTMDVYQDFMSYT-SGVYVMTPGSKLLGGHAIKIVGWGTDSTSGLD------YWIVQNSWGSDWGMN-----GFFWIQRGTNMCGIDRDAS 302 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_793 ID=mRNA_793|Name=jgi.p|Trimin1|157181|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=948bp|location=Sequence derived from alignment at Contig_2:1452357..1453304+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTGCCTCCTAATCATTTATAAGCGACACAGCATTCGACGAGTGATAGGback to top protein sequence of jgi.p|Trimin1|157181 >Trimin1|157181|e_gw1.2.300.1 ID=Trimin1|157181|e_gw1.2.300.1|Name=jgi.p|Trimin1|157181|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=316bp MCLLIIYKRHSIRRVIGLGSVGLPSYFKWREKWLMPVRNQRGCASCWSISback to top mRNA from alignment at Contig_2:1452357..1453304+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_793 ID=mRNA_793|Name=jgi.p|Trimin1|157181|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=948bp|location=Sequence derived from alignment at Contig_2:1452357..1453304+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_2:1452357..1453304+ >mRNA_793 ID=mRNA_793|Name=jgi.p|Trimin1|157181|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=948bp|location=Sequence derived from alignment at Contig_2:1452357..1453304+ (Tribonema minus UTEX_B_3156 )back to top |