mRNA_793 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|157181
Unique NamemRNA_793
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: A0A836CH74_9STRA (FirrV-1-A48 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH74_9STRA)

HSP 1 Score: 653 bits (1685), Expect = 2.190e-237
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 1
Query:    1 MCLLIIYKRHSIRRVIGLGSVGLPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLACPKFADGIQRVKTVKSTAEDICLEPNTVVFTSKQDVINRNIVNMKRALQRSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVAATDMTQMAYSSYSEYVNDPDRFNFLGSVKSAHT 945
            MCLLIIYKRHSIRRVIGLGSVGLPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLACPKFADGIQRVKTVKSTAEDICLEPNTVVFTSKQDVINRNIVNMKRALQRSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVAATDMTQMAYSSYSEYVNDPDRFNFLGSVKSAHT
Sbjct:    1 MCLLIIYKRHSIRRVIGLGSVGLPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLACPKFADGIQRVKTVKSTAEDICLEPNTVVFTSKQDVINRNIVNMKRALQRSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVAATDMTQMAYSSYSEYVNDPDRFNFLGSVKSAHT 315          
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: A0A835Z8B2_9STRA (Putative cysteine protease n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8B2_9STRA)

HSP 1 Score: 384 bits (985), Expect = 1.760e-130
Identity = 176/314 (56.05%), Postives = 234/314 (74.52%), Query Frame = 1
Query:    1 MCLLIIYKRHSIRRVIGLGSVGLPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLACPKFADGIQRVKTVKSTAEDICLEPNTVVFTSKQDVINRNIVNMKRALQRSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVAATDMTQMAYSSYSEYVNDPDRFNFLGSVKSAH 942
            + LL I +R     V       LP+YFKW+E++L+PVRNQ+GCA+CW++SVCDM++D++NL++GG +G N LS QYL+SC+ GH GC+ G SPE  YDLPQLT+ GIPLE  FPY A+DT  C    +G+ RV+TVK+T  D+C++P TV    +Q VI+ NIV MK+AL   PIVGTLRVH D+Y YDG +IY VTPGS  IGYHAV +VG+A+   N  EPGF + YWV +SSWG++WGA+ G + GF YVKMG NEADIESRAS C+V +P+ +KDA+AATD+  M Y+SY++YV DP+R +F+G++   H
Sbjct:   20 LTLLYINRRRIYTAVAAAAPDDLPTYFKWKERFLVPVRNQKGCAACWALSVCDMMSDTINLRSGGQWGRNHLSPQYLISCWSGHEGCNTGGSPEGTYDLPQLTDAGIPLEEEFPYVATDTAPCKAITEGVLRVRTVKNTGRDLCIDPATVPENVRQQVIDANIVRMKKALLNGPIVGTLRVHEDLYKYDGLAIYQVTPGSRQIGYHAVEVVGWANEEVNFAEPGFDDAYWVVRSSWGDNWGAR-GIRYGFAYVKMGCNEADIESRASVCEVEMPESVKDAIAATDIDTMRYTSYTQYVEDPERSHFVGAMVKNH 332          
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: A0A835YX55_9STRA (Putative cysteine protease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX55_9STRA)

HSP 1 Score: 307 bits (786), Expect = 3.410e-100
Identity = 153/308 (49.68%), Postives = 198/308 (64.29%), Query Frame = 1
Query:   19 YKRHSIRRVIGLGSVGLPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLACPKFADGIQRVKTVKSTAEDICLEPNTVVFTSKQDVINRNIVNMKRAL-QRSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVAATDMTQMAYSSYSEYVNDPDRFNFLGSVKSA 939
            Y+  S    +      LPSY K++EK+LMPVR+QR CA+CWS SV DM+AD+LN +T GA+G  PLS+QYLLSC   H GC++G SPE+VYDLPQLT+ G PL++  PY+  +T  C      + RV+TV +TA  +C +P+  +  ++   I RN+ NMKRAL Q  PIVGTLRV  D+Y Y G  I+   P S   GYHAV IVG+ D N N  EPGF   YW+ +SSWG  WG   G + G+ YV MG N ADIESRAS C V  P  L++    T  +   Y SY  YV+DP+R NF+G +K+A
Sbjct:   27 YRSASFATPVADDGAPLPSYLKYKEKFLMPVRDQRCCAACWSFSVADMMADTLNAQTAGAFGKRPLSAQYLLSCSSAHRGCEVGGSPEDVYDLPQLTDAGCPLDADLPYEGKET-PCRPLPPDVLRVRTVPNTAVSLCDDPDRALPGTRAATIRRNVRNMKRALLQYGPIVGTLRVTGDLYAYRGDGIFRGDPASKFYGYHAVEIVGWCDENVNWAEPGFDGAYWIVRSSWGFDWGVPKGMRYGWAYVTMGENCADIESRASVCRVEFPMALEEVRRRTPTSAARYESYEHYVDDPERENFIGGLKTA 333          
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: A0A836CER7_9STRA (FirrV-1-A48 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CER7_9STRA)

HSP 1 Score: 295 bits (756), Expect = 8.790e-96
Identity = 147/308 (47.73%), Postives = 199/308 (64.61%), Query Frame = 1
Query:   13 IIYKRHSIRRVIGLGSVGLPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLACPKFADGIQRVKTVKSTAEDICLEPNTVVFTSKQDVINRNIVNMKRALQR-SPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGF-SEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVAATDMTQMAYSSYSEYVNDPDRFNFLGSV 930
            I Y+  S   +I L +  LPSY K++E+WLMPVR+Q  CA+CWS SV DM+AD+LN+ T G YG  PLS+QYLLSC + H GCD+G SPE VY+LPQ+T+ G PL++  PY+   T  C +      RV+T+K+TA D+C +P+  +  ++   I RN+ NMKRAL    PIVGT+RV  D+Y Y    IY   P S L+GYHA+ I+G+     N  EPGF S  +W+ +SSWG  WG   G   GF +++MG N  DIESRAS C V  P EL      T +T++ Y SY++Y +DP+R NF+ +V
Sbjct:   18 IAYRVSSRASIIPL-TAALPSYLKYKERWLMPVRDQGPCAACWSYSVVDMMADTLNVWTAGGYGKRPLSAQYLLSCSKAHEGCDVGGSPEAVYNLPQMTDVGCPLDADLPYEGKVT-ECKQLPPDAFRVRTIKNTAVDLCDDPSLALPGTRGATIKRNVENMKRALMAYGPIVGTIRVTEDLYAYKADGIYRGDPTSKLVGYHAIEIIGWCCEAVNIREPGFDSPAFWICRSSWGVYWGVPPGVSSGFAFIEMGANVCDIESRASVCRVNFPKELAAIAKKTPLTEVRYESYTDYADDPERQNFIDAV 323          
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: A0A836CC90_9STRA (Pept_C1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC90_9STRA)

HSP 1 Score: 272 bits (696), Expect = 2.300e-86
Identity = 146/311 (46.95%), Postives = 189/311 (60.77%), Query Frame = 1
Query:   34 IRRVIGLG-SVGLPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGHL-GCDIGDSPENVYDLPQLTEQG--IPLESAFPYQASD---TLACPKFADGIQRVKTVKSTAEDICLEPNTVVFTSKQDVINRNIVNMKRALQR-SPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVAATDMTQMAYSSYSEYVNDPDRFNFLGSVKSAH 942
            I R+ G   S  LPSYFK+ E  L P R+Q GCASCW+ +VCDM AD+LNL+T GA+G+ PLS QYLLSC  G    C+ G  PE   + P  T +G  IPLES  PY+A +     +  + + G  RV+    ++  +C +P+  +   +   + RN+ NMKRA+ R  P+VGTLRV  D+Y+Y    IY   P S  +GYHAVLIVG+ DA  N+ EPGF   YWV KSSWG  WG  +G + G+ YV MG N A++ESRAS    V+PD   +A      T  AY SY +Y  DPDR NFLG+V  AH
Sbjct:   39 IPRLFGASASEPLPSYFKYHEALLNPPRDQLGCASCWAFAVCDMAADALNLRTEGAWGVRPLSPQYLLSCAPGLTQSCEEGGIPEEALESPAATSEGGGIPLESEVPYRADEGPCAASSARPSPGGVRVRIAPGSSLSLCDDPSLALPGMRGATVKRNVANMKRAIMRHGPVVGTLRVTEDLYDYAASEIYRQDPASAFVGYHAVLIVGWCDARVNSAEPGFDGAYWVIKSSWGQHWGVPEGVRSGYAYVAMGENIAEVESRASVATAVLPDGFAEAEGWQKRT--AYWSYDDYARDPDRDNFLGAVARAH 347          
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: B5LWL5_9PHYC (Putative cysteine protease n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWL5_9PHYC)

HSP 1 Score: 192 bits (488), Expect = 3.650e-55
Identity = 118/292 (40.41%), Postives = 164/292 (56.16%), Query Frame = 1
Query:   67 LPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGH--LGCDIGDSPENVYDLPQLTEQGIPLESAFPYQAS---DTLAC-PKFADGIQRVKTVKSTAEDICLEPNTVVFTS--KQDVINRNIVNMKRAL-QRSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSE--GYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVAATDMTQMAYSSYSEYVNDPDR 909
            LPSY K++E+ L PV +Q  CASCWSISV  MLAD +++ TGG      LS Q ++SC+ GH  L C  G  PE  Y    + E GI ++  +PY+ S   D   C P    G  R+    S+   +C++P     +S  ++ VI+ NI NMK+ L    P V T+ V+ ++Y+YDG S+Y     S  +G H+V+ VGY D   N  EPGF    GYWV ++SW + W  +     G+ Y++ G N   IESRASR  VV  DE+ +   A  + +  Y SY+ YVNDPDR
Sbjct:   60 LPSYLKYKERLLTPVVDQGKCASCWSISVVQMLADRVSVYTGGKVRKR-LSVQEMISCWDGHDGLACSKGGVPEEAYQY--IVENGIGMDEDYPYEQSNSDDIRPCVPSRLKG-PRLYVQGSSVRSLCIDPYEYEQSSGERRGVIDMNICNMKKELLMNGPFVCTIMVYQNLYDYDGLSVYQGHDDSEFVGGHSVVCVGYCDEGINGVEPGFDVPGGYWVIRNSW-SDWPLKSPASEGYFYIQKGSNVCGIESRASRALVVPTDEILNNTVAN-LNESRYVSYTSYVNDPDR 345          
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: Q6XM39_9PHYC (FirrV-1-A48 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM39_9PHYC)

HSP 1 Score: 191 bits (485), Expect = 1.350e-54
Identity = 120/310 (38.71%), Postives = 168/310 (54.19%), Query Frame = 1
Query:   46 IGLGSVG---LPSYFKWREKWLMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGH--LGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLA---CPKFADGIQRVKTVKSTAEDICLEPNTVVFTSK--QDVINRNIVNMKRALQ-RSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSE--GYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVVPDELKDAVA--ATDMTQMAYSSYSEYVNDPDRFNFLGSV 930
            I LG V    LPSY K++E+ L P  +Q  CASCWSISV  MLAD +++ T G   L  LS Q ++SC+ GH  L C  G  PE  Y    + E GI L   +PY+ + +     C +      R+  +  +   +CL+P  +   S+  Q VI+ NI NMK  L    P V T+ V+ ++Y+YDG S+Y    G+  +G H+V  +GY D   N  EPGF    GYWV K+SW + W       +G+ Y+K G N   IESRAS   +V PD+ +D  A    D+ +  Y +YS YVNDP+R  ++  V
Sbjct:   54 IDLGQVATSDLPSYLKYKERLLAPSIDQGSCASCWSISVVQMLADRVSVSTNGKIKLK-LSVQEMISCWDGHDGLACSKGGVPEKAYQY--IIENGIGLAEDYPYEQNHSTVIGGCDRQRLDGYRLYILPDSVRSLCLDPYQLPQGSREYQKVIDTNIRNMKHELLLHGPFVCTIMVYQNLYDYDGLSVYEGHEGTEFVGGHSVTCIGYCDEGINGEEPGFDVPGGYWVIKNSW-SDWPLHSPASQGYFYIKKGSNVCGIESRASSA-LVDPDQGEDIRANIIADLNESRYMTYSSYVNDPERQLYVTRV 358          
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: Q54IS1_DICDI (Pept_C1 domain-containing protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54IS1_DICDI)

HSP 1 Score: 108 bits (269), Expect = 1.330e-23
Identity = 83/265 (31.32%), Postives = 125/265 (47.17%), Query Frame = 1
Query:   55 GSVGLPSYFKWREKW---LMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSC-YRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASD--TLACPKFADGIQRVKTVKSTAEDICL---EPNTVVFTSKQDVINRNIVNMKRALQRSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYA-DANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRASRCDVVV 819
            GS+  P+ F  R +W   + P+ NQ  C SCW+ S  ++L+D L + +        LS Q L++C   G+ GC  G  P+  ++  +L  +G+P +S  PY A +    +C +            S +ED  L   +P T+   S    I  NI      L   PIVGT+ V+ D  +Y    +Y +TPGS L+G HA+ IVG+  D  +  +       YW+  +SWG  WG Q     GF ++ M      I S AS  +  V
Sbjct:   86 GSI--PTSFDSRVQWPDCIHPILNQEQCGSCWAFSSSEVLSDRLCIASNNKTNPGALSPQTLVACDVYGNDGCS-GGIPQLAWEYMEL--KGLPTDSCVPYTAGNGTVYSCQRSC----------SDSEDYSLYRAKPFTLKTCSSVQCIQENI------LAYGPIVGTMEVYEDFMSYS-SGVYVMTPGSSLLGGHAIKIVGWGFDQTSQLN-------YWIVANSWGADWGQQ-----GFFFISM--ETCSISSDASAAEARV 314          
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: F1A5T9_DICPU (Pept_C1 domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A5T9_DICPU)

HSP 1 Score: 106 bits (265), Expect = 1.650e-23
Identity = 81/250 (32.40%), Postives = 125/250 (50.00%), Query Frame = 1
Query:   58 SVG-LPSYFKWREKW---LMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSC-YRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLACPKFADGIQRVKTVKSTAEDICL---EPNTVVFTSKQDVINRNIVNMKRALQRSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGFIYV---KMGVN 774
            SVG +P  F  R +W   + P+ NQ  C SCW+ S  ++L+D L + + G  G+  LS Q L+SC   G+ GC+ G  P+  ++  +L   GIP    FPY + +        DG   VK      E   L   +P T+   +  + I ++I+         PI GT+ V+ D  +Y    +YT+TPGS L+G HA+ IVG+    A+      ++ YW+  +SWG SWG       GF ++   + G+N
Sbjct:   27 SVGSIPQSFDARTQWPNCIHPILNQEQCGSCWAFSASEVLSDRLCIASNGKTGV-VLSPQALVSCDIFGNQGCN-GGIPQLAWEYMEL--HGIPTYGCFPYTSGNG------TDG-SCVKNSCVDNEQYTLYRAKPLTLKTCASVECIQQDIMKF------GPIQGTMEVYSDFMSYT-SGVYTMTPGSSLLGGHAIKIVGWGFDQAS------NQNYWIVANSWGPSWGID-----GFFWIAFDQCGIN 247          
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Match: D3BV74_POLPP (Pept_C1 domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BV74_POLPP)

HSP 1 Score: 107 bits (266), Expect = 3.380e-23
Identity = 76/258 (29.46%), Postives = 122/258 (47.29%), Query Frame = 1
Query:   46 IGLGSVGLPSYFKWREKW---LMPVRNQRGCASCWSISVCDMLADSLNLKTGGAYGLNPLSSQYLLSC-YRGHLGCDIGDSPENVYDLPQLTEQGIPLESAFPYQASDTLA--CPKFADGIQRVKTVKSTAEDICLEPNTVVFTSKQDVINRNIVNMKRALQRSPIVGTLRVHHDVYNYDGKSIYTVTPGSPLIGYHAVLIVGYADANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGFIYVKMGVNEADIESRAS 801
            + +  V +P+ F  R  W   +  V NQ  C SCW+ +  + L+D L + + GA  +  LS Q L+SC    + GC+ G  P+  ++  +L   GIP +S FPY + +  A  C K      + +  K        +  T+   S    I  N+          PI GT+ V+ D  +Y    +Y +TPGS L+G HA+ IVG+   + +  +      YW+ ++SWG+ WG       GF +++ G N   I+  AS
Sbjct:   74 VSVSKVAVPNSFDSRTNWPGCVHAVLNQGQCGSCWAFAASESLSDRLCIASQGAINVT-LSPQALVSCDIEFNQGCN-GGIPQMAWEYLEL--HGIPTDSCFPYTSGNGTAPDCQKECSDGSKYQLYKG-------KTFTLKTCSSVAAIQANV------FAYGPIEGTMDVYQDFMSYT-SGVYVMTPGSKLLGGHAIKIVGWGTDSTSGLD------YWIVQNSWGSDWGMN-----GFFWIQRGTNMCGIDRDAS 302          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157181 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CH74_9STRA2.190e-237100.00FirrV-1-A48 n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A835Z8B2_9STRA1.760e-13056.05Putative cysteine protease n=2 Tax=Tribonema minus... [more]
A0A835YX55_9STRA3.410e-10049.68Putative cysteine protease n=1 Tax=Tribonema minus... [more]
A0A836CER7_9STRA8.790e-9647.73FirrV-1-A48 n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A836CC90_9STRA2.300e-8646.95Pept_C1 domain-containing protein n=1 Tax=Tribonem... [more]
B5LWL5_9PHYC3.650e-5540.41Putative cysteine protease n=1 Tax=Feldmannia spec... [more]
Q6XM39_9PHYC1.350e-5438.71FirrV-1-A48 n=1 Tax=Feldmannia irregularis virus a... [more]
Q54IS1_DICDI1.330e-2331.32Pept_C1 domain-containing protein n=1 Tax=Dictyost... [more]
F1A5T9_DICPU1.650e-2332.40Pept_C1 domain-containing protein n=1 Tax=Dictyost... [more]
D3BV74_POLPP3.380e-2329.46Pept_C1 domain-containing protein n=1 Tax=Polyspho... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_2contigContig_2:1452357..1453304 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|157181|e_gw1.2.300.1
BRITEko00000,ko00001,ko00536,ko01000,ko01002,ko03110,ko04147
KEGG Pathwayko04140,ko04142,ko04210,ko04612,ko04621,ko04924,map04140,map04142,map04210,map04612,map04621,map04924
KEGG koko:K01363
EC3.4.22.1
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0005198,GO:0005201,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005604,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0006810,GO:0007155,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009966,GO:0009967,GO:0010646,GO:0010647,GO:0016192,GO:0016197,GO:0016787,GO:0017147,GO:0019538,GO:0022610,GO:0023051,GO:0023056,GO:0030111,GO:0030177,GO:0030312,GO:0031012,GO:0033036,GO:0035592,GO:0035593,GO:0036094,GO:0042600,GO:0043170,GO:0043236,GO:0044238,GO:0044421,GO:0044424,GO:0044464,GO:0045184,GO:0046907,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050840,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060828,GO:0062023,GO:0065007,GO:0070011,GO:0071692,GO:0071704,GO:0071944,GO:0090263,GO:0097159,GO:0140096,GO:1901265,GO:1901363,GO:1901564
Preferred nameTINAGL1
Descriptionscavenger receptor activity
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG1544@1|root,KOG1544@2759|Eukaryota
Evalue5.64e-51
Seed ortholog2880.D8LPA7
Hectar predicted targeting categorymitochondrion
TranscriptId157503
TrackFilteredModels1
ProteinId157181
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157181gene_793Tribonema minus UTEX_B_3156 geneContig_2 1452357..1453304 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_793_1exon_793_1Tribonema minus UTEX_B_3156 exonContig_2 1452357..1453304 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_793CDS_793Tribonema minus UTEX_B_3156 CDSContig_2 1452357..1453304 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157181Trimin1|157181|e_gw1.2.300.1Tribonema minus UTEX_B_3156 polypeptideContig_2 1452357..1453304 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_793 ID=mRNA_793|Name=jgi.p|Trimin1|157181|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=948bp|location=Sequence derived from alignment at Contig_2:1452357..1453304+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTGCCTCCTAATCATTTATAAGCGACACAGCATTCGACGAGTGATAGG
CCTAGGCAGCGTAGGATTGCCATCTTACTTCAAATGGCGAGAAAAGTGGT
TAATGCCGGTCCGCAACCAACGTGGATGCGCATCGTGTTGGTCCATATCA
GTTTGTGACATGCTCGCTGATAGCCTCAACTTGAAAACTGGAGGGGCTTA
TGGACTCAATCCGCTCTCGAGTCAGTACCTGTTGAGTTGCTATCGCGGCC
ATTTGGGCTGTGATATCGGTGACTCACCTGAAAATGTGTACGATTTGCCC
CAGCTTACCGAGCAGGGCATCCCGCTGGAGTCAGCGTTTCCATATCAGGC
TAGCGACACGTTAGCATGTCCCAAGTTTGCAGATGGAATCCAAAGGGTGA
AAACCGTCAAAAGCACTGCAGAAGATATATGCTTGGAGCCGAACACTGTT
GTGTTTACATCGAAACAAGATGTGATCAATAGGAACATCGTTAACATGAA
GCGCGCTCTGCAACGATCCCCAATCGTTGGGACGTTGCGCGTTCACCATG
ATGTGTACAATTACGATGGCAAGTCGATTTATACAGTCACACCTGGCTCA
CCGTTAATTGGTTACCACGCGGTTTTAATCGTTGGCTATGCGGATGCAAA
TGCAAACACGCACGAACCCGGTTTCAGTGAGGGCTACTGGGTAGCTAAGT
CATCATGGGGCAATTCATGGGGGGCACAAGACGGCGACAAACGGGGTTTC
ATCTATGTTAAAATGGGTGTGAATGAGGCCGATATTGAGTCGCGGGCATC
TAGGTGTGACGTTGTCGTGCCTGATGAGCTAAAGGATGCTGTAGCAGCGA
CGGATATGACGCAAATGGCATACTCAAGTTACTCGGAATACGTCAATGAT
CCGGACCGCTTCAACTTTTTAGGCAGTGTAAAGAGTGCGCACACTTGA
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protein sequence of jgi.p|Trimin1|157181

>Trimin1|157181|e_gw1.2.300.1 ID=Trimin1|157181|e_gw1.2.300.1|Name=jgi.p|Trimin1|157181|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=316bp
MCLLIIYKRHSIRRVIGLGSVGLPSYFKWREKWLMPVRNQRGCASCWSIS
VCDMLADSLNLKTGGAYGLNPLSSQYLLSCYRGHLGCDIGDSPENVYDLP
QLTEQGIPLESAFPYQASDTLACPKFADGIQRVKTVKSTAEDICLEPNTV
VFTSKQDVINRNIVNMKRALQRSPIVGTLRVHHDVYNYDGKSIYTVTPGS
PLIGYHAVLIVGYADANANTHEPGFSEGYWVAKSSWGNSWGAQDGDKRGF
IYVKMGVNEADIESRASRCDVVVPDELKDAVAATDMTQMAYSSYSEYVND
PDRFNFLGSVKSAHT*
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mRNA from alignment at Contig_2:1452357..1453304+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_793 ID=mRNA_793|Name=jgi.p|Trimin1|157181|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=948bp|location=Sequence derived from alignment at Contig_2:1452357..1453304+ (Tribonema minus UTEX_B_3156 )
ATGTGCCTCCTAATCATTTATAAGCGACACAGCATTCGACGAGTGATAGG CCTAGGCAGCGTAGGATTGCCATCTTACTTCAAATGGCGAGAAAAGTGGT TAATGCCGGTCCGCAACCAACGTGGATGCGCATCGTGTTGGTCCATATCA GTTTGTGACATGCTCGCTGATAGCCTCAACTTGAAAACTGGAGGGGCTTA TGGACTCAATCCGCTCTCGAGTCAGTACCTGTTGAGTTGCTATCGCGGCC ATTTGGGCTGTGATATCGGTGACTCACCTGAAAATGTGTACGATTTGCCC CAGCTTACCGAGCAGGGCATCCCGCTGGAGTCAGCGTTTCCATATCAGGC TAGCGACACGTTAGCATGTCCCAAGTTTGCAGATGGAATCCAAAGGGTGA AAACCGTCAAAAGCACTGCAGAAGATATATGCTTGGAGCCGAACACTGTT GTGTTTACATCGAAACAAGATGTGATCAATAGGAACATCGTTAACATGAA GCGCGCTCTGCAACGATCCCCAATCGTTGGGACGTTGCGCGTTCACCATG ATGTGTACAATTACGATGGCAAGTCGATTTATACAGTCACACCTGGCTCA CCGTTAATTGGTTACCACGCGGTTTTAATCGTTGGCTATGCGGATGCAAA TGCAAACACGCACGAACCCGGTTTCAGTGAGGGCTACTGGGTAGCTAAGT CATCATGGGGCAATTCATGGGGGGCACAAGACGGCGACAAACGGGGTTTC ATCTATGTTAAAATGGGTGTGAATGAGGCCGATATTGAGTCGCGGGCATC TAGGTGTGACGTTGTCGTGCCTGATGAGCTAAAGGATGCTGTAGCAGCGA CGGATATGACGCAAATGGCATACTCAAGTTACTCGGAATACGTCAATGAT CCGGACCGCTTCAACTTTTTAGGCAGTGTAAAGAGTGCGCACACTTGA
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Coding sequence (CDS) from alignment at Contig_2:1452357..1453304+

>mRNA_793 ID=mRNA_793|Name=jgi.p|Trimin1|157181|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=948bp|location=Sequence derived from alignment at Contig_2:1452357..1453304+ (Tribonema minus UTEX_B_3156 )
ATGTGCCTCCTAATCATTTATAAGCGACACAGCATTCGACGAGTGATAGG
CCTAGGCAGCGTAGGATTGCCATCTTACTTCAAATGGCGAGAAAAGTGGT
TAATGCCGGTCCGCAACCAACGTGGATGCGCATCGTGTTGGTCCATATCA
GTTTGTGACATGCTCGCTGATAGCCTCAACTTGAAAACTGGAGGGGCTTA
TGGACTCAATCCGCTCTCGAGTCAGTACCTGTTGAGTTGCTATCGCGGCC
ATTTGGGCTGTGATATCGGTGACTCACCTGAAAATGTGTACGATTTGCCC
CAGCTTACCGAGCAGGGCATCCCGCTGGAGTCAGCGTTTCCATATCAGGC
TAGCGACACGTTAGCATGTCCCAAGTTTGCAGATGGAATCCAAAGGGTGA
AAACCGTCAAAAGCACTGCAGAAGATATATGCTTGGAGCCGAACACTGTT
GTGTTTACATCGAAACAAGATGTGATCAATAGGAACATCGTTAACATGAA
GCGCGCTCTGCAACGATCCCCAATCGTTGGGACGTTGCGCGTTCACCATG
ATGTGTACAATTACGATGGCAAGTCGATTTATACAGTCACACCTGGCTCA
CCGTTAATTGGTTACCACGCGGTTTTAATCGTTGGCTATGCGGATGCAAA
TGCAAACACGCACGAACCCGGTTTCAGTGAGGGCTACTGGGTAGCTAAGT
CATCATGGGGCAATTCATGGGGGGCACAAGACGGCGACAAACGGGGTTTC
ATCTATGTTAAAATGGGTGTGAATGAGGCCGATATTGAGTCGCGGGCATC
TAGGTGTGACGTTGTCGTGCCTGATGAGCTAAAGGATGCTGTAGCAGCGA
CGGATATGACGCAAATGGCATACTCAAGTTACTCGGAATACGTCAATGAT
CCGGACCGCTTCAACTTTTTAGGCAGTGTAAAGAGTGCGCACACTTGA
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