mRNA_7815 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|148843
Unique NamemRNA_7815
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|148843 vs. uniprot
Match: A0A836CF85_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF85_9STRA)

HSP 1 Score: 454 bits (1168), Expect = 8.890e-162
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1
Query:    1 EGLEPSTLTLTLVSSRHSLWGHLLWNASIRLAEMFDGGEVDLKGKTVLELGAGAGLPGLIAALCGASTVLITDYGTSVDHTLVEAIRRNIDALSPHVPKECLHAAPHVWGGSVQPLLDVLGEGHKFDVILLADLLFNRSEHRKLLQTCSTALAPGGTVWVTWGHHDPPKAPLDLKFFEIAAAPHSEGGFDFELEHLPPVQYVDLFEEHDGMDEARGVVYT 660
            EGLEPSTLTLTLVSSRHSLWGHLLWNASIRLAEMFDGGEVDLKGKTVLELGAGAGLPGLIAALCGASTVLITDYGTSVDHTLVEAIRRNIDALSPHVPKECLHAAPHVWGGSVQPLLDVLGEGHKFDVILLADLLFNRSEHRKLLQTCSTALAPGGTVWVTWGHHDPPKAPLDLKFFEIAAAPHSEGGFDFELEHLPPVQYVDLFEEHDGMDEARGVVYT
Sbjct:    1 EGLEPSTLTLTLVSSRHSLWGHLLWNASIRLAEMFDGGEVDLKGKTVLELGAGAGLPGLIAALCGASTVLITDYGTSVDHTLVEAIRRNIDALSPHVPKECLHAAPHVWGGSVQPLLDVLGEGHKFDVILLADLLFNRSEHRKLLQTCSTALAPGGTVWVTWGHHDPPKAPLDLKFFEIAAAPHSEGGFDFELEHLPPVQYVDLFEEHDGMDEARGVVYT 220          
BLAST of jgi.p|Trimin1|148843 vs. uniprot
Match: D7FPM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM1_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 4.630e-54
Identity = 122/314 (38.85%), Postives = 154/314 (49.04%), Query Frame = 1
Query:   13 PSTLTLTLVSSRHSLWGHLLWNASIRLAEMFDGGEVDLKGKTVLELGAGAGLPGLIAALCGASTVLITDYGTSVDHTLVEAIRRNIDALSPH-VPKECLHAAPHVWGGSVQPLLDVL-----------------------------------------------------------------------------------GEGHKFDVILLADLLFNRSEHRKLLQTCSTALAPGG---------------TVWVTWGHHDPPKAPLDLKFFEIAAAPHSEGGFDFELEHLPPVQYVDLFEEHDGMDEARGVVY 657
            PSTL L+LV+SRHSLWGH LWNA++ LA+M D  E D++GK VLELGAGAGLP LI AL GA+ V+I+DY TS D  L+  I+ NID + P  VP+  LHA  HVWG +V+ LL  L                                                                                   G+G  FDV+++ADLLFNRS+H +LL+TC   L   G               TVWV++ HHDP KA LD+KFFE+A     E GF      +  VQ  DLF E+DG+D+ RG V+
Sbjct:   57 PSTLKLSLVNSRHSLWGHRLWNAALLLADMVDKDEFDVRGKRVLELGAGAGLPALICALKGATKVVISDYATSTDAALMVPIQINIDRVQPEFVPEGTLHAVGHVWGQAVEDLLVPLRTGSSLSLRHENGGGSSSDGEKNASLGSGAAXXXXXXXXXXXXXXAGAPVQDTGTEEEVASVHGQGEGSPRSCHRARPIGGGGGDGEGFDVVIMADLLFNRSQHAQLLETCDRCLLGRGSXXXXXXXXXXXXXXTVWVSFSHHDPEKAELDMKFFELA----KEKGF--VATRIKTVQMRDLFVENDGLDDLRGQVH 364          
BLAST of jgi.p|Trimin1|148843 vs. uniprot
Match: K8Z697_NANGC (Nicotinamide n-methyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z697_NANGC)

HSP 1 Score: 167 bits (423), Expect = 7.600e-48
Identity = 94/183 (51.37%), Postives = 114/183 (62.30%), Query Frame = 1
Query:   13 PSTLTLTLVSSRHSLWGHLLWNASIRLAEMFDGGEVDLKGKTVLELGAGAGLPGLIAALCGASTVLITDYGTSVDHTLVEAIRRNIDAL--SPHVPKECLHAAPHVWGGSVQPLLDVLGEGH-----KFDVILLADLLFNRSEHRKLLQTCSTALAPGGTVWVTWGHHDPPKAPLDLKFFEIA 540
            P  L ++L+S RHSLWGH LWNA+  L EM D     ++GK  LELGAGA LP L+AAL GA  V+ +DY TS D  LV A++ NID L     +P + L A  +VWG  +  LL  L E       KF VIL ADL+FNRSEH+KLL TC T L   G V VT+ HHDP K  LD+ FF +A
Sbjct:   69 PLELEISLLSCRHSLWGHKLWNAAKVLGEMIDSRPSLVQGKYCLELGAGAALPSLLAALNGARRVVCSDYATSTDRVLVAAMQTNIDRLVAQAFLPHDVLRAVGYVWGQPINSLLAPLQEEKGGGVSKFQVILCADLIFNRSEHKKLLWTCKTCLEEDGEVLVTYSHHDPGKRALDMAFFALA 251          
BLAST of jgi.p|Trimin1|148843 vs. uniprot
Match: A0A1X2GH70_9FUNG (Uncharacterized protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GH70_9FUNG)

HSP 1 Score: 158 bits (399), Expect = 2.860e-44
Identity = 95/224 (42.41%), Postives = 132/224 (58.93%), Query Frame = 1
Query:   22 LTLTLVSSRHSLWGHLLWNASIRLAEMFDGGEVDLKGKTVLELGAGAGLPGLIAALCGASTVLITDYGTSVDHTLVEAIRRNIDA-LSPHVPKECLHAAPHVWGGSVQPLLDVLGEGHK-FDVILLADLLFNRSEHRKLLQTCSTALAPG-GTVWVTWGHHDPPKAPLDLKFFEIAAAPHSEG---------GFDFELEHLPPVQYVDLFEEHDGMDEARGVVY 657
            +T+ LV S H LW H LWNAS   A++FD     ++GKTVLELGAG  LP L+AAL GAS V++TDY    D  L++ I+ N+D  +  HVPK+ +     +WG +V PL  +L  GH  FDVI+L+DL+FN S+H  +L++C   L P  G V+V + HH P  A  DL FF +A  P SE          G+ F+ +H    +   +FEE  G ++ R  V+
Sbjct:   45 MTIQLVGS-HPLWAHHLWNASKVFADLFDKSPELVQGKTVLELGAGGALPSLVAALQGASKVVVTDYP---DQELLDNIQHNVDQNVIAHVPKDLVVVKGFIWGTAVDPLRQLLPAGHTTFDVIILSDLVFNHSQHHSMLKSCRELLTPKTGRVYVFYTHHRPHLAHRDLDFFTLAERPVSETEDPDDRDTLGYGFKADHFMIEKMHVMFEEDPGDEQVRSTVH 264          
BLAST of jgi.p|Trimin1|148843 vs. uniprot
Match: A0A1X2H5H3_SYNRA (Putative methyltransferase-domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H5H3_SYNRA)

HSP 1 Score: 151 bits (382), Expect = 8.800e-42
Identity = 93/224 (41.52%), Postives = 125/224 (55.80%), Query Frame = 1
Query:   19 TLTLTLVSSRHSLWGHLLWNASIRLAEMFDGGEVDLKGKTVLELGAGAGLPGLIAALCGASTVLITDYGTSVDHTLVEAIRRNIDALSPHVPKECLHAAPHVWGGSVQPLLDVLGEGHK-FDVILLADLLFNRSEHRKLLQTCSTALAPG-GTVWVTWGHHDPPKAPLDLKFFEIAAAPHSEG---------GFDFELEHLPPVQYVDLFEEHDGMDEARGVVY 657
            ++ + LV S H LW H LWNAS   A+ FD       GKTVLELGAG  LP ++AAL GAS V++TDY    D  LV+ ++ N+D   P + KE +H   +VWG S   L   L  G   +DVI+L+DL+FN S+H  +L+TC   L P  G V+V + HH P  A  DL+FF+IA  P+ E          G+ F  +H    +   +FEE  G  E R  V+
Sbjct:   41 SIKIRLVGS-HPLWAHHLWNASKVFADHFDQNSSICAGKTVLELGAGGALPSIVAALNGASQVVVTDYP---DKELVDNMQYNVDINLPALVKEHVHVEGYVWGTSTASLRKALPAGKTTYDVIILSDLVFNHSQHHAMLRTCRDLLTPSTGRVYVFYTHHRPHLAHRDLEFFQIAQRPYQEDVDPDDRELVGYSFHADHFLQKKMHVMFEEDPGDIETRATVH 260          
BLAST of jgi.p|Trimin1|148843 vs. uniprot
Match: A0A197JXY6_9FUNG (Protein N-terminal and lysine N-methyltransferase EFM7 n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JXY6_9FUNG)

HSP 1 Score: 147 bits (371), Expect = 7.360e-40
Identity = 99/248 (39.92%), Postives = 133/248 (53.63%), Query Frame = 1
Query:   10 EPSTLTLTLVSSRHSLWGHLLWNASIRLAEMFDGGEVDLKGKTVLELGAGAGLPGLIAALCGASTVLITDYGTSVDHTLVEAIRRNIDALSPHVPKEC-LHAAPHVWGGSVQPLLDVL--------------GEGHK--FDVILLADLLFNRSEHRKLLQTCSTALAPG-GTVWVTWGHHDPPKAPLDLKFFEIAAAPHSE--------------GGFDFELEHLPPVQYVDLFEEHDGMDEARGVVY 657
            EP  + L LV S H LW H LWNA+   A+  D       GK+VLE+GAGA LP  +AA+ GA+ V+ITDY    D+ L+  I+ N D + P + KE  +    ++WG + +PLL  L              G   K  FD I+L+DLLFN S+HR +L+TC   L PG G V+V + HH P  A  D KFFEIAAAP  +              GGF F++E +   +   +F E  G +E RG V+
Sbjct:   41 EPQEMKLRLVGS-HPLWAHHLWNAAKVFADWMDDHPQYTVGKSVLEIGAGAALPSFVAAVNGATKVVITDYP---DNDLIANIQYNADHIVPELTKEGKVIVQGYLWGSNTRPLLAHLNPTTNADTTNSTPSGTARKELFDTIILSDLLFNHSQHRSMLKTCKETLKPGTGRVFVFFTHHRPWLADADNKFFEIAAAPVIDPPEGDESSDDERDLGGFGFKVEKVVEHKMTPMFLEDPGSEEVRGTVH 284          
BLAST of jgi.p|Trimin1|148843 vs. uniprot
Match: A0A642UGT7_9ASCO (Protein N-terminal and lysine N-methyltransferase EFM7 n=1 Tax=Trichomonascus ciferrii TaxID=44093 RepID=A0A642UGT7_9ASCO)

HSP 1 Score: 145 bits (365), Expect = 2.300e-39
Identity = 93/222 (41.89%), Postives = 124/222 (55.86%), Query Frame = 1
Query:    1 EGLEPSTLTLTLVSSRHSLWGHLLWNASIRLAEMFDGG-EVDLKGKTVLELGAGAGLPGLIAALCGASTVLITDYGTSVDHTLVEAIRRNIDALSPHVPKECLHAAP-HVWGGSVQPLLDVLGE-GHKFDVILLADLLFNRSEHRKLLQTCSTALAPGGTVWVTWGHHDPPKAPLDLKFFEIAAAPHSEGGFDFELEHLPPVQYVDLFEEHDGMDEARGVVY 657
            E  EP  + + LV  +  LWGHLLWNA I   +  D   E  +KGKTVLELGA A LP L+AAL  A  V+ITDY    D  L++ I  N+D L     K    A   ++WG  V  LL+  G+ G KFD I+LADL+FN SEH KL++TC   L P G + V + HH P  A  DL+FFE A     +   +F+   +   +   +FE+ +G +  R +VY
Sbjct:   37 ESDEPKEVKVRLVG-KSPLWGHLLWNAGIVTTDFIDQNKEKYIKGKTVLELGAAAALPSLVAAL-SADNVVITDYP---DPDLMDNINYNVDMLKKSTSKPLNVATEGYIWGNDVSSLLNAKGQNGRKFDFIILADLIFNHSEHAKLIKTCDECLTPDGKILVVFTHHRPKLAHRDLQFFEDA-----QTQANFKSTQIIEEKRFPMFEKDEGSELVRSMVY 248          
BLAST of jgi.p|Trimin1|148843 vs. uniprot
Match: A0A8J6B3W3_9EUKA (Nicotinamide N-methyltransferase-like n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6B3W3_9EUKA)

HSP 1 Score: 142 bits (357), Expect = 3.160e-38
Identity = 88/208 (42.31%), Postives = 117/208 (56.25%), Query Frame = 1
Query:   37 VSSRHSLWGHLLWNASIRLAEMFDGGEVDLKGKTVLELGAGAGLPGLIAALCGASTVLITDYGTSVDHTLVEAIRRNIDALSPHVPKECLHAAPHVWGGSVQPLLDVLGEGHKFDVILLADLLFNRSEHRKLLQTCSTALAPGGTVWVTWGHHDPPKAPLDLKFFEIAA--APHSEGGFDFELEHLPPVQYVDLFEEHDGMDEARGVV 654
            ++  HSLWGH+LWNAS  +    D G +D++GK VLELG+GAGL  + + L GA+ V  TDY    D  L+E ++ NI+  +     + +H A   WG    PLL    +G  FDVI+L+DLLFN S+H  LL+TC   LAPGG V V +  H P     DL FF++A      S G   F +  L PV+   +FEE  G  E R  V
Sbjct:   42 LAPEHSLWGHVLWNASRVILNQMDEGIIDVRGKRVLELGSGAGLASIASCLNGAAAVYATDYP---DEELIERLQTNINRNTKDTACD-VHVAGFAWGSDTAPLL---ADG-LFDVIILSDLLFNHSQHGALLRTCRECLAPGGVVRVAFSSHRPWLQHKDLAFFDLAVDRTVVSNGECCFAVTELDPVRMPVMFEEDPGDIEIRRTV 241          
BLAST of jgi.p|Trimin1|148843 vs. uniprot
Match: A0A4V1IVC1_9FUNG (Uncharacterized protein n=2 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4V1IVC1_9FUNG)

HSP 1 Score: 142 bits (357), Expect = 1.010e-37
Identity = 87/223 (39.01%), Postives = 124/223 (55.61%), Query Frame = 1
Query:    1 EGLEPSTLTLTLVSSRHSLWGHLLWNASIRLAEMFDGGEVDLKGKTVLELGAGAGLPGLIAALCGASTVLITDYGTSVDHTLVEAIRRNIDALSPHVPKEC-LHAAPHVWGGSVQPLLDVLGEGHK---FDVILLADLLFNRSEHRKLLQTCSTALAPGGTVWVTWGHHDPPKAPLDLKFFEIAAAPHSEGGFDFELEHLPPVQYVDLFEEHDGMDEARGVVY 657
            +G EP+ L L LV   HSLW H LWNA + +A   D  +  + GKT LELGA AG P LIAA+ GA+  +ITDY    D  L++ I +N+D  +    +   +H   + WG  V PLL +L +      FD I +ADL+FN SEH+ +LQTC+ +LAPGG V+ T+ HH    A  + +F+++A          F    +   Q+  +F E  G +  RG V+
Sbjct:   39 QGGEPAQLRLNLVGG-HSLWAHHLWNAGLSMARYLDRHKSLVAGKTTLELGAAAGTPSLIAAINGAACTVITDYP---DQPLLDNIEKNVDENAGEAKQAGRVHTVGYKWGDDVTPLLALLPKTSPSPGFDHIFMADLIFNHSEHKHMLQTCAASLAPGGRVFTTFTHHIVKWAWRNDRFWDVATR------LGFVYVQIAEEQWEPMFPEDPGSEAVRGTVH 251          
BLAST of jgi.p|Trimin1|148843 vs. uniprot
Match: L8H439_ACACA (Nicotinamide nmethyltransferase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H439_ACACA)

HSP 1 Score: 140 bits (354), Expect = 1.560e-37
Identity = 89/214 (41.59%), Postives = 121/214 (56.54%), Query Frame = 1
Query:   28 LTLVSSRHSLWGHLLWNASIRLAEMFDGGEVDLKGKTVLELGAGAGLPGLIAALCGASTVLITDYGTSVDHTLVEAIRRNIDALSPHVPKE-CLHAAPHVWGGSVQPLLDVLGE--GHKFDVILLADLLFNRSEHRKLLQTCSTALAPGGTVWVTWGHHDPPKAPLDLKFFEIAAAPHSEGGFDFELEHLPPVQYVDLFEEHDGMDEARGVVYT 660
            L LV S H LW HLLWNA + LA+  D     L GKTVLELGAG  LP +IA   GA  V++TDY    +  L+  +  NI+A +    +E  ++   H+WG SV+PLL  L +    KFDV+++ADL+FN ++  +LLQT   AL   G V V++  H P  A LD +FF++A      GGF  E+EHL       +F    G +E R  V+ 
Sbjct:   57 LKLVGS-HPLWAHLLWNAGLVLADYLDANPSLLHGKTVLELGAGGSLPSIIAIKHGAKKVVVTDYP---EKELIVNVHENIEANTTAAERENVVNIQGHLWGTSVEPLLAALADVGETKFDVVIMADLIFNHNQQTQLLQTARAALKDDGKVLVSFSSHRPSVAHLDERFFDMARQ-EEHGGF--EVEHLFTEIRTPMFAVDFGSEEVRSTVHV 263          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|148843 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CF85_9STRA8.890e-162100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
D7FPM1_ECTSI4.630e-5438.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K8Z697_NANGC7.600e-4851.37Nicotinamide n-methyltransferase n=3 Tax=Monodopsi... [more]
A0A1X2GH70_9FUNG2.860e-4442.41Uncharacterized protein n=1 Tax=Hesseltinella vesi... [more]
A0A1X2H5H3_SYNRA8.800e-4241.52Putative methyltransferase-domain-containing prote... [more]
A0A197JXY6_9FUNG7.360e-4039.92Protein N-terminal and lysine N-methyltransferase ... [more]
A0A642UGT7_9ASCO2.300e-3941.89Protein N-terminal and lysine N-methyltransferase ... [more]
A0A8J6B3W3_9EUKA3.160e-3842.31Nicotinamide N-methyltransferase-like n=1 Tax=Carp... [more]
A0A4V1IVC1_9FUNG1.010e-3739.01Uncharacterized protein n=2 Tax=Caulochytrium prot... [more]
L8H439_ACACA1.560e-3741.59Nicotinamide nmethyltransferase n=1 Tax=Acanthamoe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_37contigContig_37:131166..135060 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|148843|gw1.37.107.1
BRITEko00000,ko01000,ko03036
KEGG koko:K17878
EC2.1.1.1
GOsGO:0000183,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006325,GO:0006342,GO:0006355,GO:0006464,GO:0006479,GO:0006480,GO:0006766,GO:0006767,GO:0006769,GO:0006807,GO:0006996,GO:0008112,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009820,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016278,GO:0016279,GO:0016458,GO:0016740,GO:0016741,GO:0017144,GO:0018013,GO:0018022,GO:0018027,GO:0018193,GO:0018201,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031365,GO:0032259,GO:0034641,GO:0036211,GO:0040029,GO:0043170,GO:0043412,GO:0043414,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051186,GO:0051252,GO:0051253,GO:0051276,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0071885,GO:0072524,GO:0080090,GO:0140096,GO:1901360,GO:1901564,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
Preferred nameEFM7
Descriptionmethyltransferase activity
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG3897@1|root,KOG2920@2759|Eukaryota
Evalue7.59e-55
Seed ortholog2880.D7FPM1
Hectar predicted targeting categoryother localisation
TranscriptId149165
TrackFilteredModels1
ProteinId148843
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|148843gene_7815Tribonema minus UTEX_B_3156 geneContig_37 131166..135060 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|148843Trimin1|148843|gw1.37.107.1Tribonema minus UTEX_B_3156 polypeptideContig_37 131166..135060 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7815_1exon_7815_1Tribonema minus UTEX_B_3156 exonContig_37 131166..131248 +
exon_7815_2exon_7815_2Tribonema minus UTEX_B_3156 exonContig_37 132079..132179 +
exon_7815_3exon_7815_3Tribonema minus UTEX_B_3156 exonContig_37 133481..133513 +
exon_7815_4exon_7815_4Tribonema minus UTEX_B_3156 exonContig_37 134179..134374 +
exon_7815_5exon_7815_5Tribonema minus UTEX_B_3156 exonContig_37 134814..135060 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7815CDS_7815Tribonema minus UTEX_B_3156 CDSContig_37 131166..131248 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7815 ID=mRNA_7815|Name=jgi.p|Trimin1|148843|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=660bp|location=Sequence derived from alignment at Contig_37:131166..135060+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GAGGGATTGGAACCCAGCACGCTGACGCTGACACTGGTTTCGAGCCGGCA
CAGCTTATGGGGACACCTGCTCTGGAATGCCAGCATCCGACTGGCTGAAA
TGTTTGATGGCGGCGAAGTGGACCTGAAAGGGAAGACAGTGTTGGAGCTG
GGGGCGGGGGCTGGGTTGCCTGGACTGATTGCAGCGCTGTGTGGCGCGTC
AACAGTGCTCATCACAGACTACGGGACGTCGGTGGACCACACTCTGGTAG
AGGCAATTCGAAGAAACATAGACGCGCTGTCGCCGCATGTGCCCAAGGAG
TGTCTACATGCTGCGCCGCATGTATGGGGTGGCAGCGTTCAGCCACTACT
GGATGTCCTGGGCGAAGGGCACAAGTTTGATGTCATACTGCTCGCGGATC
TCTTGTTCAACAGATCCGAACACCGCAAGCTGTTGCAGACATGCAGCACA
GCACTCGCTCCCGGTGGCACAGTCTGGGTGACCTGGGGGCATCATGACCC
CCCCAAAGCGCCCCTGGATCTGAAGTTTTTCGAGATTGCCGCTGCGCCAC
ACAGCGAAGGGGGGTTTGACTTTGAGCTGGAGCACCTGCCTCCCGTTCAG
TATGTGGACCTATTTGAGGAACATGATGGCATGGACGAGGCGAGAGGCGT
GGTGTACACA
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protein sequence of jgi.p|Trimin1|148843

>Trimin1|148843|gw1.37.107.1 ID=Trimin1|148843|gw1.37.107.1|Name=jgi.p|Trimin1|148843|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=220bp
EGLEPSTLTLTLVSSRHSLWGHLLWNASIRLAEMFDGGEVDLKGKTVLEL
GAGAGLPGLIAALCGASTVLITDYGTSVDHTLVEAIRRNIDALSPHVPKE
CLHAAPHVWGGSVQPLLDVLGEGHKFDVILLADLLFNRSEHRKLLQTCST
ALAPGGTVWVTWGHHDPPKAPLDLKFFEIAAAPHSEGGFDFELEHLPPVQ
YVDLFEEHDGMDEARGVVYT
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mRNA from alignment at Contig_37:131166..135060+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7815 ID=mRNA_7815|Name=jgi.p|Trimin1|148843|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3895bp|location=Sequence derived from alignment at Contig_37:131166..135060+ (Tribonema minus UTEX_B_3156 )
GAGGGATTGGAACCCAGCACGCTGACGCTGACACTGGTTTCGAGCCGGCA CAGCTTATGGGGACACCTGCTCTGGAATGCCAGGTAACATGAACGCAGCT TGTCAGCCTCGATACTGTGGTGTGAACATGAAAACGCCTCACCTTATCAG GGCATTGATGGTGCTCTTGCGATGAGTACTGCTTCACTTGTCTGACTTTG AAGCCAGTCAGGCTGGTGAAGTCCCTGGAAGCTGTTAATTCGCAACATAA ACGTGATGTTTTCACTGAACCTTTTCAGTCACAGTCAAATATGCAAACGT GAAAATATCCCCTCCACCAACTCTGACGCATCTCCAGATGTACCCGCGTC AGCACAAAAAGCGTGACAGACCGTGTGCATTGGCGCAGCGACGGTCACTG TGAGTTATTCTAAAGGCGTTGGCAAGTTGGCACCGTTGCACATCCAATCA GAGTCCTGTGTGCCCCCAGGCTAAGTCTGTAACTATGCGCCCATGAGTGC ACGCAAGCATGTACGAGGACACAGGGTGTTGAAGAAAAGTTGTGTGTGTC ACCTCCGCAGCAAACGCAGTGCAGCTGAGCCATGTTGCCGTTCAACTGCA GTGTCTCCTGAGTTTGATTCACACATACTACATGGCGAGGCTGGGCCGCA AATGATCATTCAAGTATTGGTGTCGTGACTTGTTGCATTGATTTCTCCCA GGTCTCATTGCCTTTGCATGCGCTTCAGCGAAGCGACAGACTTCTGACTA GTCCCACGCTGCCTACGTACCCAACATGCAGCATGCAAATGATTATTGAC GACAAACTTCCACTTGACAGTGAACTGCCACGCACTTCTGTACTAAGATT GCAGCTGAACACTGCCTTGCCCTCGATCGGTCGGTGTATGCTGTTGTCAC TTTTGCACTGCAGCATCCGACTGGCTGAAATGTTTGATGGCGGCGAAGTG GACCTGAAAGGGAAGACAGTGTTGGAGCTGGGGGCGGGGGCTGGGTTGCC TGGACTGATTGCAGGTCAGCCTGTTGTCTACAATTACTATTCCACAATAG CTGTACTTCCAAGTAGACTTTTAACTAGCTCAAGCCAAATATGAAGTCGA ACTCCAGACGCAGCGGAACTCAGGTACCGTCTTGTCGATAATTAAGGACA CTGGACGGCTTTTTGGTTGGTTTTAACGCCAGCCAAAACATAGGACACCC TTTTGATTGCTTTACCACAAAGATGTCCACCCCTTATTTTATTGCTTCTG CAATACGATGTTCACCCCTCTTTATGTGCCACACAGATTACTATGTTCAC GATGAAGTTCACTCCGTCAAAGCAAAGCTGAACTTGCTCGTGCTGGAGCT GGGCCATGCGGCGCTGCTGTACGTTGCTGCGGGAACCTATTAGGCGCCAT TTACTAGCTCCGAACTCTGCTCTATGGAAACCTAGCACTTGAGGCTGCTG GGCCCGCGGACCCTGACAGAACTGGCGAGAGGGTTTTCTGCGGCGTTGTT GTCGACGAATCGACTTTGAAGAAGAACGAAGTGCATAGCAGTCGATCTCT GTACTCATCTTAACATGAGCCACCCCCTTTAATTAGCTCCGCAAAAAGGA CGTCCACCCCCCCTTCTTACGCGGAAACACAAAAGCCGTCCAGTGTCCTT ATTTATTGACAAGACGGTAAGCATGCAAGTAGGTGAATTCTGTCCATATG CTGCAGCACTCAAGTTTCTGCGTTGGTGCTGCTCACAATGATCTCTTGTC AACTTTGACAAGAATGCACTTGTATTTTGGCTATGACAGCATGCAACAGG AGGAGTCCGACAATCTGTGCATACCTTGGGAACAGGACTATTTGATGGCT GTGAAGCAGATTTCAGGGTTCTTGCGCTGAGTGCTTGCCTGAATTTACTG CCTCTTTGCACAGAAGGACTGCGAAATTAGCTGCTGCTTCGTATACTCTT CGAAGCACATACATAGCTACACTACCTCTTTGAAGTGGTTGCATGCCTGC ATTATCGGTTGCTGCATTGGTCAGCCACCGTAACCAGTAGGCGTCGTAGA AAAACCTGTGCCCCATGTGCTGTACCTCAAGTGCAACATTGAAGTACATT GAGCTCTTGCTGTAATATAGAAATGTTTCGCACTTCCGCATGTGAATACA TACATAGCTTGCGTTGTCGACGTGCTGCATTTATCAGCAGCCAGAAAACA GGGGCAGGCGTCGTATTAGACAGGTCACAAAATCTGTGCCTCACGAGCTA CTTCAAAGTGAAACATTAAAGTTTCATCGTTCGCTGCTGTCACGTCTGCT TCTCCCGCATTGCAGCGCTGTGTGGCGCGTCAACAGTGCTCATCACAGGT GAGTTGGCCACAACACAATTCAGATGCTTTGTTTGCCAAGCGCCAGCTGG TTAGTTGGGCGCATCGAAACCTAACCATGACCCTGACCCTAACTCTAACC CTAACCCTAAAATCAAAAGTGGTCATCACAGGCGAGGCAGTCACAACATA ATCAGCATGCATTGCCAAGTCTTACTGAGTTTGTTGACCGCTGCGATGTC CTCTAATTCGAATGAATCTGCGCGTAATCTCGACAATGTGTTTGAATACC CGATTGAATGAGGACTCAAATGCGTCACATGTGGGCATCGCGTAGCCCTT TGTCATTGGCTCACTATATATCACACTGAATAACATGCTGCTTGCAAGCA GGAGAGCCCGTTCTGGACCACATCATCTAGATGGGCTCCAGTGACCACAG CATGGGCAGCTGTGCTGTTTGGCTTTCCGTCCCTCGATGGTGTGCTGAAT AATTGTGAGTTTATGTGAGCACCAGATCTTGCTCAGTTCAACTTGAACTT ACCTCATTGGCAAGGCCGGAACTCACCTCGCCAATGAGTCCACAGCAGCG CTTTGCTATCGACACCACTTGATACGGCATTGCTCCTCATTGGCGCTTTT CATTCTGCCAAAACCTCAGGGTTTGGTTGAAACCTAACCTCAACTTCAAC TCTACTGCTGCAGACTACGGGACGTCGGTGGACCACACTCTGGTAGAGGC AATTCGAAGAAACATAGACGCGCTGTCGCCGCATGTGCCCAAGGAGTGTC TACATGCTGCGCCGCATGTATGGGGTGGCAGCGTTCAGCCACTACTGGAT GTCCTGGGCGAAGGGCACAAGTTTGATGTCATACTGCTCGCGGATCTCTT GTTCAACAGGTGAGTGAGAGGCAGCACACAACAGCTTGAAAGTGCGGCTG CTTGAACATGGTGCAGGGCAGTGTGCGTGCGCCCTGGTGTTGTCAACACA ATGCATCTTGATGTCGTGTCGGTGTTATGATTACAATGCATTTCAGTGTC ATACAGGTACCGATACGCATCTGCATCGACAAAAGCGGTGTCGTGCAGGT ATCGAGATGCGTTTTATCAGCAACACCGCAACTACTATTATGTACTTGGC ACACCGCAGGACTGTTGTTGCACAGGTTTCAGTTGTAATGTCAACTGAAG GGCCAAAGGTGGGGGTTTGCTGCTGGCATGTAGGCAACTTGTTCACTCAT TGCATCAACAAGCCATGCAGTGCTGCCAATGAGTCATCGCCATCAACAGA CAACTGCTGTTGATAATTCATTTTTGCTCACACGCTCCGCTTGTGCAGAT CCGAACACCGCAAGCTGTTGCAGACATGCAGCACAGCACTCGCTCCCGGT GGCACAGTCTGGGTGACCTGGGGGCATCATGACCCCCCCAAAGCGCCCCT GGATCTGAAGTTTTTCGAGATTGCCGCTGCGCCACACAGCGAAGGGGGGT TTGACTTTGAGCTGGAGCACCTGCCTCCCGTTCAGTATGTGGACCTATTT GAGGAACATGATGGCATGGACGAGGCGAGAGGCGTGGTGTACACA
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Coding sequence (CDS) from alignment at Contig_37:131166..135060+

>mRNA_7815 ID=mRNA_7815|Name=jgi.p|Trimin1|148843|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=660bp|location=Sequence derived from alignment at Contig_37:131166..135060+ (Tribonema minus UTEX_B_3156 )
GAGGGATTGGAACCCAGCACGCTGACGCTGACACTGGTTTCGAGCCGGCA
CAGCTTATGGGGACACCTGCTCTGGAATGCCAGCATCCGACTGGCTGAAA
TGTTTGATGGCGGCGAAGTGGACCTGAAAGGGAAGACAGTGTTGGAGCTG
GGGGCGGGGGCTGGGTTGCCTGGACTGATTGCAGCGCTGTGTGGCGCGTC
AACAGTGCTCATCACAGACTACGGGACGTCGGTGGACCACACTCTGGTAG
AGGCAATTCGAAGAAACATAGACGCGCTGTCGCCGCATGTGCCCAAGGAG
TGTCTACATGCTGCGCCGCATGTATGGGGTGGCAGCGTTCAGCCACTACT
GGATGTCCTGGGCGAAGGGCACAAGTTTGATGTCATACTGCTCGCGGATC
TCTTGTTCAACAGATCCGAACACCGCAAGCTGTTGCAGACATGCAGCACA
GCACTCGCTCCCGGTGGCACAGTCTGGGTGACCTGGGGGCATCATGACCC
CCCCAAAGCGCCCCTGGATCTGAAGTTTTTCGAGATTGCCGCTGCGCCAC
ACAGCGAAGGGGGGTTTGACTTTGAGCTGGAGCACCTGCCTCCCGTTCAG
TATGTGGACCTATTTGAGGAACATGATGGCATGGACGAGGCGAGAGGCGT
GGTGTACACA
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