mRNA_780 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|156919 vs. uniprot
Match: A0A835Z4S2_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4S2_9STRA) HSP 1 Score: 429 bits (1102), Expect = 5.800e-152 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1
Query: 1 MRTTPAEILDVDCGCGCSTVSIASNYSAASVTGIDTNGYSVAIAAIDHPTIKWVHGNTTAMPFHDASFDMVNLDHVISCKTLADIKTTLLEAGRVLRHGGVITILDTSDCATLPEYTYAVDHIKFILEHAGFACVEWAVDQIPGTAMITAWRTVGTPIPVKLAVPHKYFARAKKANLLGMSPFEVVAFVIQFVLAYAWSQVIMDLLRMWLKF 636
MRTTPAEILDVDCGCGCSTVSIASNYSAASVTGIDTNGYSVAIAAIDHPTIKWVHGNTTAMPFHDASFDMVNLDHVISCKTLADIKTTLLEAGRVLRHGGVITILDTSDCATLPEYTYAVDHIKFILEHAGFACVEWAVDQIPGTAMITAWRTVGTPIPVKLAVPHKYFARAKKANLLGMSPFEVVAFVIQFVLAYAWSQVIMDLLRMWLKF
Sbjct: 1 MRTTPAEILDVDCGCGCSTVSIASNYSAASVTGIDTNGYSVAIAAIDHPTIKWVHGNTTAMPFHDASFDMVNLDHVISCKTLADIKTTLLEAGRVLRHGGVITILDTSDCATLPEYTYAVDHIKFILEHAGFACVEWAVDQIPGTAMITAWRTVGTPIPVKLAVPHKYFARAKKANLLGMSPFEVVAFVIQFVLAYAWSQVIMDLLRMWLKF 212
BLAST of jgi.p|Trimin1|156919 vs. uniprot
Match: A0A835YWG9_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWG9_9STRA) HSP 1 Score: 116 bits (291), Expect = 4.070e-29 Identity = 72/208 (34.62%), Postives = 116/208 (55.77%), Query Frame = 1
Query: 1 MRTTPAEILDVDCGCGCSTVSIASNYSAASVTGIDTNGYSVAIAAIDHPTIKWVHGNTTAMPFHDASFDMVNLDHVISCKTLADIKTTLLEAGRVLRHGGVITILDTSDCATLPEYTYAVDHIKFILEHAGFACVEWAVDQIPGTAMITAWRTVGTPIPVKLAVPHKYFARAKKANLLGMSPFEVVAFVIQFVLAYAWSQVIMDLLRM 624
M + P ++LDV G G ST + ++ A VT +D + +S+A +++D H + ++PF DA FD+VNL ++++ + + E RV RH GVI +LD + + +K+ILEHAG+A V VD T M+TAWRTVG PI V++AV + KK L FE+++ ++Q A W+ VI++L+++
Sbjct: 1 MNSCPYDVLDVGAGLGASTHMLTRSFPEARVTAVDVDSHSLAASSVD--IFLRCHADAQSLPFEDACFDLVNLAYIVNEIPVDAAALIMAECARVTRHTGVIAMLDRK-----AKSGFTAKDLKYILEHAGYAVVN--VDDSHDTRMVTAWRTVGAPIKVQVAVQAQ-----KKGGALWA--FELLSTILQLFAAVMWTLVILELIKL 192
BLAST of jgi.p|Trimin1|156919 vs. uniprot
Match: UPI0004E0D1E4 (demethylmenaquinone methyltransferase n=1 Tax=Salinicoccus luteus TaxID=367840 RepID=UPI0004E0D1E4) HSP 1 Score: 64.3 bits (155), Expect = 5.990e-9 Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 1
Query: 19 EILDVDCGCGCSTVSIASNYSAASVTGIDTNGYSVAIAA---IDHPTIKWVHGNTTAMPFHDASFDMVNLDHVISCKTLADIKTTLLEAGRVLRHGGVITILDTSD 327
+ILDV CG G T+ +A A V G+D + + +AA DH I+ + GN A+PF D SFD V + + L + + + E RVL+ GG + +L+TS+
Sbjct: 48 DILDVCCGTGDWTIQLAEEAPEAEVIGLDFSERMLEVAAEKTADHSNIELIQGNAMALPFDDGSFDYVTIG--FGLRNLPEYRKAIEEFHRVLKPGGALVVLETSN 151
BLAST of jgi.p|Trimin1|156919 vs. uniprot
Match: UPI0018921B57 (methyltransferase domain-containing protein n=1 Tax=Quadrisphaera sp. INWT6 TaxID=2596917 RepID=UPI0018921B57) HSP 1 Score: 64.7 bits (156), Expect = 6.370e-9 Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = 1
Query: 19 EILDVDCGCGCSTVSIASNYSAASVTGIDTN----GYSVAIAAIDHPTIKWVHGNTTAMPFHDASFDMVNLDHVISCKTLADIKTTLLEAGRVLRHGGVITILDTSDCAT 336
++LD+ CG G T +A + V G+D G + ++AA ++WV G+ A+P+ DASFD+V+ V+ + +AD L EA RVLR GG++ + D AT
Sbjct: 37 DLLDLGCGPGTITADLAQRVAPGRVVGLDAAAAVLGEAASLAAARGVDVEWVVGDALALPYGDASFDVVHAHQVL--QHVADPVAVLREAARVLRPGGLLAVRDVDYAAT 144
BLAST of jgi.p|Trimin1|156919 vs. uniprot
Match: A0A5C8ZD56_9ACTN (Methyltransferase domain-containing protein n=2 Tax=Quadrisphaera sp. DD2A TaxID=2593304 RepID=A0A5C8ZD56_9ACTN) HSP 1 Score: 62.4 bits (150), Expect = 4.060e-8 Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 1
Query: 19 EILDVDCGCGCSTVSIASNYSAASVTGIDTNG----YSVAIAAIDHPTIKWVHGNTTAMPFHDASFDMVNLDHVISCKTLADIKTTLLEAGRVLRHGGVITILDTSDCAT 336
++LD+ CG G T +A+ + V G+D + A+A ++WV G+ A+PF DASFD+V+ V+ + L D L EA RVLR GG++ + D AT
Sbjct: 37 DLLDLGCGPGTITADLAARVAPGRVVGLDAAAGVLEEAAALAERRGLAVEWVVGDALALPFEDASFDVVHAHQVL--QHLPDAVGALREAARVLRPGGLLAVRDVDYAAT 144
BLAST of jgi.p|Trimin1|156919 vs. uniprot
Match: A0A316A7L1_9ACTN (Methyltransferase family protein n=1 Tax=Quadrisphaera granulorum TaxID=317664 RepID=A0A316A7L1_9ACTN) HSP 1 Score: 62.4 bits (150), Expect = 4.160e-8 Identity = 40/110 (36.36%), Postives = 59/110 (53.64%), Query Frame = 1
Query: 19 EILDVDCGCGCSTVSIASNYSAASVTGIDTNG----YSVAIAAIDHPTIKWVHGNTTAMPFHDASFDMVNLDHVISCKTLADIKTTLLEAGRVLRHGGVITILDTSDCAT 336
++LD+ CG G TV +A + V G+D + A+A ++WV G+ A+PF DASFD+V+ V+ + +AD L E RVLR GGV+ + D AT
Sbjct: 37 DLLDLGCGPGTITVDLAERVAPGRVVGLDAAAGVLEEASALAERRGAAVEWVTGDALALPFADASFDVVHAHQVL--QHVADPVGVLREMARVLRPGGVLAVRDVDYAAT 144
BLAST of jgi.p|Trimin1|156919 vs. uniprot
Match: M7PA95_9BACL (Demethylmenaquinone methyltransferase n=6 Tax=Bhargavaea TaxID=941338 RepID=M7PA95_9BACL) HSP 1 Score: 61.6 bits (148), Expect = 5.390e-8 Identity = 48/121 (39.67%), Postives = 66/121 (54.55%), Query Frame = 1
Query: 7 TTPAEILDVDCGCGCSTVSIA-SNYSAASVTGID--TNGYSVAIAAIDHPT-IKWVHGNTTAMPFHDASFDMVNLDHVISCKTLADIKTTLLEAGRVLRHGGVITILDTSDCATLPEYTYA 357
T A LDV CG G T+++A + + VTG+D N SVA + T I++V GN +PF D SFD V + + + D++ TL E RVL+ GG+I L+TS TLP Y A
Sbjct: 46 TKGASALDVCCGTGDWTIALADATGPSGKVTGLDFSANMLSVAKEKTEGRTNIRFVEGNAMDLPFPDNSFDYVTVG--FGLRNVPDLRKTLFEMHRVLKPGGMIACLETSQ-PTLPGYRQA 163
BLAST of jgi.p|Trimin1|156919 vs. uniprot
Match: A0A135WAR3_9BACL (Demethylmenaquinone methyltransferase n=1 Tax=Sporosarcina sp. HYO08 TaxID=1759557 RepID=A0A135WAR3_9BACL) HSP 1 Score: 59.7 bits (143), Expect = 2.600e-7 Identity = 47/131 (35.88%), Postives = 64/131 (48.85%), Query Frame = 1
Query: 16 AEILDVDCGCGCSTVSIASNYSA-ASVTGIDTNGYSVAIA---AIDHPTIKWVHGNTTAMPFHDASFDMVNLDHVISCKTLADIKTTLLEAGRVLRHGGVITILDTSDCATLPEYTYAVD-HIKFILEHAG 393
A LDV CG T+++A A VTG+D + +A D+P I V GN +PF D SFD V + + +AD T L E RVL+ GG+I L+TS +P Y + KFI+ G
Sbjct: 49 ASALDVCCGTADWTIALAEAVGADGHVTGLDFSEGMLATGREKTADYPNITLVQGNAMQLPFPDHSFDYVTIG--FGLRNVADYLTVLKEMNRVLKPGGMIACLETSQ-TKIPGYRQLFKFYFKFIMPVLG 176
BLAST of jgi.p|Trimin1|156919 vs. uniprot
Match: UPI00037596E8 (demethylmenaquinone methyltransferase n=1 Tax=Salinicoccus albus TaxID=418756 RepID=UPI00037596E8) HSP 1 Score: 58.9 bits (141), Expect = 5.100e-7 Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 1
Query: 19 EILDVDCGCGCSTVSIASNYSAASVTGIDTNGYSVAIA---AIDHPTIKWVHGNTTAMPFHDASFDMVNLDHVISCKTLADIKTTLLEAGRVLRHGGVITILDTSD 327
++LDV CG G ++ +A A VTG+D + + IA H I+ + GN MPF D FD V + + L K+ + E RVL+ GGV+ IL+TS+
Sbjct: 48 QVLDVCCGTGDWSIQLAEKAPGAQVTGLDFSENMLEIAKDKTKHHKNIELLQGNAMDMPFEDGLFDFVTIG--FGLRNLPGYKSAIDEFYRVLKPGGVLVILETSN 151
BLAST of jgi.p|Trimin1|156919 vs. uniprot
Match: A0A377FUG2_9BACL (Demethylmenaquinone methyltransferase n=30 Tax=Bacillales Family XII. Incertae Sedis TaxID=539742 RepID=A0A377FUG2_9BACL) HSP 1 Score: 58.5 bits (140), Expect = 6.850e-7 Identity = 39/107 (36.45%), Postives = 56/107 (52.34%), Query Frame = 1
Query: 16 AEILDVDCGCGCSTVSIASNYSAASVT-GIDTNGYSVAIA---AIDHPTIKWVHGNTTAMPFHDASFDMVNLDHVISCKTLADIKTTLLEAGRVLRHGGVITILDTS 324
A+ LDV CG T+ +A+ V G+D + +A+ D PTI+ +HGN A+PF D SFD V + + + D T L E RVL+ GG + L+TS
Sbjct: 51 AKCLDVCCGTADWTIQLAAAAGNTGVVKGLDFSENMLAVGNEKVADMPTIELIHGNAMALPFGDDSFDYVTIG--FGLRNVPDYMTVLREMHRVLKPGGTVVCLETS 155 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156919 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_780 ID=mRNA_780|Name=jgi.p|Trimin1|156919|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=639bp|location=Sequence derived from alignment at Contig_2:1407026..1407664- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGGACCACGCCTGCGGAGATTCTGGATGTGGACTGCGGCTGCGGATGback to top protein sequence of jgi.p|Trimin1|156919 >Trimin1|156919|e_gw1.2.241.1 ID=Trimin1|156919|e_gw1.2.241.1|Name=jgi.p|Trimin1|156919|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=213bp MRTTPAEILDVDCGCGCSTVSIASNYSAASVTGIDTNGYSVAIAAIDHPTback to top mRNA from alignment at Contig_2:1407026..1407664- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_780 ID=mRNA_780|Name=jgi.p|Trimin1|156919|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=639bp|location=Sequence derived from alignment at Contig_2:1407026..1407664- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_2:1407026..1407664- >mRNA_780 ID=mRNA_780|Name=jgi.p|Trimin1|156919|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=639bp|location=Sequence derived from alignment at Contig_2:1407026..1407664- (Tribonema minus UTEX_B_3156 )back to top |