mRNA_7457 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|164352
Unique NamemRNA_7457
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: A0A835Z1H9_9STRA (SF3 helicase domain-containing protein (Fragment) n=6 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H9_9STRA)

HSP 1 Score: 709 bits (1829), Expect = 4.540e-257
Identity = 356/366 (97.27%), Postives = 361/366 (98.63%), Query Frame = 1
Query:   16 KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLCPRVRKDMLTRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKAEPAIMQRIEIIPCDAKFRMPGDAKLPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEQPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNYRARREPALPPIKKRDMHEQMAAKGFAK 1113
            KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATL PRVRKDMLTRAVNIDYNADSPRIP+VMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAG+ASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMP+IKAEPAIMQRIEIIPCDAKFR PGDAK PYDANDKTHFIKNTKLRENLPVEAFLA VVQAAKRWYEGGLGE+PACCKLACDAFAAENDTLQSWINDECELGPREG DPALILCSSAFSGYNNYRAR+EPALPPIKKRDMHEQMAAKGFAK
Sbjct:    1 KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGSASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAGVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK 366          
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: A0A835YS19_9STRA (D5_N domain-containing protein n=5 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS19_9STRA)

HSP 1 Score: 716 bits (1849), Expect = 1.050e-250
Identity = 365/397 (91.94%), Postives = 373/397 (93.95%), Query Frame = 1
Query:    1 RESILKDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLCPRVRKDMLTRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKAEPAIMQRIEIIPCDAKFRMPGDAKLPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEQPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNYRARREPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNFKCVYAGLKSAGGF 1191
            RE+ILKDVFST+RDEDFEKLLDVNKDIFSCQNGVVELATATL PRVRKDMLTRAVNIDYNADSPRIP+VMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLG SARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALR            G  +DAQMIKYISGGADISGRELFG QTSFSPTAVP ANTNEMP+IKAEPAIMQRIEIIPCDAKFR PGDAK PYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGE+PACCKLACDAFAAENDTLQSWINDECELGPREG DPALILCSSAFSGYNN RAR+EPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQ N KCVYAGLKSAGG+
Sbjct:  601 REAILKDVFSTIRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRAT---------GGRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNSRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQDNCKCVYAGLKSAGGY 988          
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: A0A835Z1L1_9STRA (D5_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1L1_9STRA)

HSP 1 Score: 202 bits (514), Expect = 1.120e-57
Identity = 143/388 (36.86%), Postives = 199/388 (51.29%), Query Frame = 1
Query:   34 VRDEDFEKLLDVNKDIFSCQNGVVELATATLCPRVRKDMLTRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKAEPAIMQRIEIIPCDAK----FRMPGDAKLPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEQPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNYRARREPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNFKCVYAGLKSAG 1185
            VRD+ F  LLD +KD+ S  +GVV+L TATL PRVR D L  A++  ++ + P +  + + + D+TL+   RL RP  LE + R++GYSITGH REEIIV  +G  A N KG++  LL  VL  ++Y AP+S +       AGAASS M AL G R+  +DE+P     D Q  + ++GGA I  REL+  Q SF        N N    ++   A ++RI   P D +      M G A    D  +  H + + K++ NL   AF +  V  AK+WYE GLG  P CC         +N  +  WI + CE+G  EG      L +S    +N++ A R P    I       +M  +GF      R   +Q   K    GLK AG
Sbjct:   11 VRDKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLS--ERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGA-NSKGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEMPDEPLNDTQF-RLLAGGAGIPARELYSAQASFKNLCQIILNFNFPVQMRITHATLRRIMACPFDMQALPVVPMSGAA---LDPTNPRHILLDIKMKGNLSRAAFFSWAVAGAKKWYEEGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVG--EG------LMASTKMAWNDFCASR-PEGNNITNASFRVEMGRRGFHIAQATR---TQLRDKRCCHGLKIAG 379          
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: A0A1L9GPG1_9BURK (SF3 helicase domain-containing protein n=1 Tax=Polynucleobacter sp. MWH-Adler-W8 TaxID=1819727 RepID=A0A1L9GPG1_9BURK)

HSP 1 Score: 117 bits (293), Expect = 7.990e-25
Identity = 102/376 (27.13%), Postives = 175/376 (46.54%), Query Frame = 1
Query:   58 LLDVNKDIFSCQNGVVELATATLCPRVRKDMLTRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKAEP-AIMQRIEIIPCDAKFRMPGDAKLPYDANDKTHFIKNTKLRENLPVEA--FLAVVVQAAKRWYEGGLGEQPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNYRARREPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNFKCVYAGLK 1176
            LL+ +  +   +NGVV+L T  L       ++T+  N +Y  D+ + P+ ++ L ++           AL++ + R+LGY+ TG V EEI+V   G  A NGK ++ +++Q V G        S L + +     +  S +  L G R + L+E+ +G  LD Q++K ++G   IS R L+    ++ P+   W  TN  PV+K +   I +R+ +IP   KF     A++  D N          L E L  EA   LA ++Q A +WY+GGL   P   K     +  E+D L  ++ +  E       D A  + +  +  Y ++   R     P+ K  + +++  +G  ++          N K  Y G+K
Sbjct:  462 LLNHDAYLLGVKNGVVDLKTGMLIQPNPTMLMTKQCNANYLTDT-QCPQWLKFLNEVFQG------NQALVDSIQRLLGYTFTGSVTEEIMVICYGFGA-NGKSVMSNVIQHVAGSYGKTGSPSLLKS-RRDDDSSPRSDIAGLAGYRYISLNEMQSGDRLDEQVVKLLAGREAISARALYKDHMTYKPSGKAWLKTNHKPVVKEDDDGIWRRLVVIPFGRKF-----AEVERDPN----------LEEKLTQEADGILAWIIQGAVKWYQGGLSICPTI-KQESTEYRTESDLLGHFLEERVEFD-----DAARAIETDVYFFYQSWC--RANGTNPLSKIRLTQKLKERGVRQLPS--------NGKRYYLGIK 797          
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: A0A1Y1IMX7_KLENI (SF3 helicase domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMX7_KLENI)

HSP 1 Score: 115 bits (289), Expect = 2.760e-24
Identity = 101/355 (28.45%), Postives = 160/355 (45.07%), Query Frame = 1
Query:   22 VFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLCPRVRKDMLTRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRI-LGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAV---SAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIK-AEPAIMQRIEIIPCDAKFRMPG--DAKLPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGG--------LGEQPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNYRAR 1041
            V S + D +  KL+D + D   C NGV++L T  L       + TR+  + Y   S    +    + D+        N    + R L++ LGY++TGH  EEI     G  + NGK  ++  LQ+  G   Y  P S     KA    + GAASSH++AL+GAR+   DE      +++  IK ++GG  ++ RELF    SF PT      TN  P I  A+  +++R+ ++P    +++    D   P+     TH    T L  +   E  L  VV+ +  WY           L   PA    A D +  E D ++ ++ + C++GP      A +L        ++ +AR
Sbjct:  516 VTSVLYDPEMIKLMDCDIDSVGCPNGVLDLRTGILSFAHPSQLCTRSTGVRYMGLSHNTDRFDAFVMDL-------FNSDESIVRWLQLFLGYALTGHTSEEIFCIWYGAGS-NGKSALKMALQKAFGS--YYTPMSKDCIIKAGGKRAEGAASSHLVALKGARLALCDESEESQVINSACIKEMTGGGAVTCRELFQKCESFVPTHANVLLTNHKPSIADADGGLLRRVSLLPFRNSYKVAEEVDPNDPHSKPQSTHL--KTWLESSEGAEECLVWVVRGSVEWYARQSANPAAKVLAPLPAPMAAAFDEYLREFDDMRMFLKEFCDIGPTFVAPSADLLARFNAEMNSDLKAR 858          
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: UPI000AB7246B (Uncharacterized protein n=2 Tax=Croceicoccus mobilis TaxID=1703339 RepID=UPI000AB7246B)

HSP 1 Score: 112 bits (279), Expect = 5.010e-23
Identity = 97/301 (32.23%), Postives = 142/301 (47.18%), Query Frame = 1
Query:   61 LDVNKDIFSCQNGVVELATATLCPRVRKDML-TRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKAEP-AIMQRIEIIPCDAKFRMPG-----DAKLPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGG---LGEQPACCKLACDAFAAENDTL 933
            LD N  +    NGVV+L T  L P  R DML TR    DY+  +   P+ +Q L ++           A +  + R LGY++TG   EEIIVF +G  A NGK I  +++ +++G     AP S L   +    G      M L GAR+V ++ELPAG+ +D Q +K ++G   IS REL+    +F P    W  TN  P+IK +   I +RI ++P   KF         +AKL  + N    ++     +        L+  + A +R Y      LGE  A C +A  A    +  L
Sbjct:  450 LDANPMLLGVGNGVVDLTTGALVPN-RSDMLITRHCEADYDM-AATCPRWVQFLDEVFAGDQ------ATIHSVQRSLGYTLTGLNTEEIIVFCIGFGA-NGKSIFGNIVNRIIGGYSKVAPHSLLATRRRDDHGPRGDIAM-LEGARLVSVNELPAGMQMDEQAVKALAGREPISARELYEGFRTFDPRFTVWVRTNHRPIIKGDDDGIWRRIIVLPFRQKFEGASCDKHLEAKLWAERNGILRWMIEGARQYLATGNLSLSPTILAEQRQYRSDSDLLGEFLADCTIADPAGRVHDQEL 740          
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: A0A257JK46_9PROT (SF3 helicase domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium PA3 TaxID=2015571 RepID=A0A257JK46_9PROT)

HSP 1 Score: 110 bits (276), Expect = 7.270e-23
Identity = 103/377 (27.32%), Postives = 172/377 (45.62%), Query Frame = 1
Query:   61 LDVNKDIFSCQNGVVELATATLCPRVRKDMLTRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKAEP-AIMQRIEIIPCDAKFRMPGDAKLPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEQPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNYRARREPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNFKCVYAGLKSAGG 1188
            LD    +    NGVV+L    L P      +TR    D++  S + P  ++ L  +       ++   LL      LGY++TG+  EEI++F +G  A NGK I  +++  +LG     AP   L + +    G  +   M L GAR+V ++ELPAG+ LD Q++K ++G   IS R L     ++ P   PW  TN  P++K +   I +RI I+P    F            +++   ++   LRE    +  LA +V+ A+R+   GL   PA  K     +  ++D L  ++  EC          A +   + F  + N+   ++  + P  K+   +++  +GF   D         N K  Y GL+++GG
Sbjct:  195 LDAKPLLLGVGNGVVDLRRKRLLPNEPGYFITRYCYADFDP-SAQCPSWLRSLDAMFQGDTATIDAVQLL------LGYTLTGYSTEEIMIFCVGFGA-NGKSIFGNVVAAILGDYSRTAPSQLLASRRTDDHGPRNDMAM-LDGARLVSINELPAGMHLDEQVVKQLAGREPISARFLHKEYFTYEPRFTPWVRTNHKPIVKGDDEGIWRRIVILPFRRTFA----------PHEQDPHLEGKLLRER---DGILAWMVEGAQRYLREGLKLSPAM-KRELAQYRTDSDMLGEFLA-ECTAT----ATGARVEQKTLFLSWQNWC--KDNGVQPGSKKTFTQRLKERGFPPKDS--------NGKRYYQGLRTSGG 533          
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: A0A3C1SNC0_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3C1SNC0_9GAMM)

HSP 1 Score: 110 bits (276), Expect = 1.260e-22
Identity = 83/300 (27.67%), Postives = 142/300 (47.33%), Query Frame = 1
Query:   61 LDVNKDIFSCQNGVVELATATLCPRVRKDMLTRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKA-EPAIMQRIEIIPCDAKFRMPGDAKLPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEQPACCKLACDAFAAENDTLQSWINDEC 957
            LD  + + + +NG ++L+  TL    R D+LT    I Y  D+   P   + L+++     +      L+  + R +GYS+TG VRE++++   G  + NGK +  ++++++LG +  QA    L A +        + +    G R+V   E   G   +  ++K ++GG  I+ R +F    +F PT   W +TN  P I+  + AI +RI +IP + KF +PG+ +   D           KL + +P    +A  V+    W   GL   P   K A   +  E D L +W+ D C
Sbjct:  444 LDKGRFLLNAKNGTIDLSAGTLRGHRRVDLLTHDTEIVYRPDAAA-PTWERFLSEVFDGDAD------LIRFVQRAVGYSLTGDVREQVLLICHGNGS-NGKSVFLNIVRKLLGKLALQAAPDLLMADRHRRHPTEQADLF---GKRLVVCQETAEGRRFNEALVKQLTGGDAITARRMFEDNWTFEPTHKLWLSTNHRPEIRGTDHAIWRRIRLIPFNVKFHIPGEGEPVKDTG------MEAKLTDEMP--GIMAWAVRGCLDWQREGL-RAPEAVKAATANYQQEQDVLAAWLADCC 723          
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: A0A4P6JVW9_9CHLR (SF3 helicase domain-containing protein n=1 Tax=Ktedonosporobacter rubrisoli TaxID=2509675 RepID=A0A4P6JVW9_9CHLR)

HSP 1 Score: 110 bits (275), Expect = 1.980e-22
Identity = 91/320 (28.44%), Postives = 145/320 (45.31%), Query Frame = 1
Query:   79 IFSCQNGVVELATATLCPRVRKDMLTRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAV-SAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKA-EPAIMQRIEIIPCDAKFRMPGDAKLPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEQPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNY 1032
            + +  +GV++L T  L P   +D +       +       P+  Q L +I    P+R +  A L+RL    GYSITG   E +   L G   RNGK  + ++L++VLG           T+     S GA + H+  L+G R++  +E   G  L+   IK+++GG++IS R+L G Q SF PT +    TN  P   A + A  +R  +I  D K R     K  Y+    +  +   K   +      LA +V+   RW + GL   P+   L  + +  E D L ++I D C + P      A +  S  ++ Y  +
Sbjct:  570 LLATPSGVLDLRTGQLRPGRPEDFIRTVCPTKWTGLETPCPRFEQFLQEIFEDKPDRTSVIAFLQRLF---GYSITGLTCEAVFPILFGEEGRNGKDTLLNVLREVLGPHAGAVSHDVFTSSDRFRSGGAPTPHLCDLQGKRLIWGNETRQGECLNVAQIKWLTGGSEISARQLHGEQFSFQPTHLMLLMTNYKPQADARDKAFWERACLI--DFKMRFVDRPKETYERKKDSTLLGRLKAERS----GILAWLVRGCLRWQQVGLNT-PSSVLLWTERYREEEDNLLAFIGDCCIVRP-----DAEVRASELYNAYKEW 874          
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: A0A3D2VPM9_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3D2VPM9_9GAMM)

HSP 1 Score: 107 bits (268), Expect = 1.060e-21
Identity = 92/320 (28.75%), Postives = 140/320 (43.75%), Query Frame = 1
Query:   61 LDVNKDIFSCQNGVVELATATLCPRVRKDMLTRAVNIDY--NADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKA-EPAIMQRIEIIPCDAKFRMPGDAKLPYDANDKTHFIKNTKLRENLPVE--AFLAVVVQAAKRWYEGGLGEQPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCS 1005
            LD    + +  NG V+L T  L P  R D+LT  V I Y  NA +P            T           L++ + R +GYS+TG VRE++++   G  + NGK +  ++L+++LG +  QA    L A K        + +    G R++   E   G   +  ++K ++GG  I  R +      F+PT   W +TN  P IK  + AI +RI +IP + KF   G+ +            KN  +   L  E    LA  V     W   GLG+  A  + A   +  E D L +WI + C +G R     A +  S
Sbjct:  219 LDKGHFLLNASNGTVDLTTGVLRPHERADLLTHDVEIPYLQNATAP----AWLAFLHSTFGGD-----ADLIQFVQRAVGYSLTGDVREQVLLICHGVGS-NGKSVFLNILRKLLGGLAIQAAPDLLMADKQRRHPTEQADLF---GKRIIVCQETGEGRRFNETLVKQLTGGDGIRARRMHEDFWEFNPTHKLWLSTNHKPEIKGTDYAIWRRIRLIPFNVKFTDDGEPR------------KNPDMERQLTAELPGILAWAVAGCLDWQRNGLGKAEAV-EAATANYQQEMDVLAAWIGECCVVGKRFEAKAADLYAS 512          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z1H9_9STRA4.540e-25797.27SF3 helicase domain-containing protein (Fragment) ... [more]
A0A835YS19_9STRA1.050e-25091.94D5_N domain-containing protein n=5 Tax=Tribonema m... [more]
A0A835Z1L1_9STRA1.120e-5736.86D5_N domain-containing protein n=1 Tax=Tribonema m... [more]
A0A1L9GPG1_9BURK7.990e-2527.13SF3 helicase domain-containing protein n=1 Tax=Pol... [more]
A0A1Y1IMX7_KLENI2.760e-2428.45SF3 helicase domain-containing protein n=1 Tax=Kle... [more]
UPI000AB7246B5.010e-2332.23Uncharacterized protein n=2 Tax=Croceicoccus mobil... [more]
A0A257JK46_9PROT7.270e-2327.32SF3 helicase domain-containing protein (Fragment) ... [more]
A0A3C1SNC0_9GAMM1.260e-2227.67SF3 helicase domain-containing protein n=1 Tax=Can... [more]
A0A4P6JVW9_9CHLR1.980e-2228.44SF3 helicase domain-containing protein n=1 Tax=Kte... [more]
A0A3D2VPM9_9GAMM1.060e-2128.75SF3 helicase domain-containing protein n=1 Tax=Can... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_31contigContig_31:1071987..1073180 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|164352|e_gw1.31.21.1
BRITEko00000
KEGG koko:K06919
DescriptionD5 N terminal like
COG categoryS
Max annot lvl1224|Proteobacteria
EggNOG OGsCOG3378@1|root,COG3378@2|Bacteria,1MV7I@1224|Proteobacteria,42YMP@68525|delta/epsilon subdivisions,2WUNJ@28221|Deltaproteobacteria,2MGFT@213115|Desulfovibrionales
Evalue9.95e-28
Seed ortholog573370.DMR_15020
Hectar predicted targeting categoryother localisation
TranscriptId164674
TrackFilteredModels1
ProteinId164352
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164352gene_7457Tribonema minus UTEX_B_3156 geneContig_31 1071987..1073180 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7457_1exon_7457_1Tribonema minus UTEX_B_3156 exonContig_31 1071987..1073180 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7457CDS_7457Tribonema minus UTEX_B_3156 CDSContig_31 1071987..1073180 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164352Trimin1|164352|e_gw1.31.21.1Tribonema minus UTEX_B_3156 polypeptideContig_31 1071987..1073180 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7457 ID=mRNA_7457|Name=jgi.p|Trimin1|164352|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1194bp|location=Sequence derived from alignment at Contig_31:1071987..1073180- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGCGAGTCCATCCTGAAGGACGTATTCAGCACCGTACGCGACGAGGATTT
TGAAAAGCTACTCGACGTCAACAAGGACATCTTCAGCTGCCAAAACGGCG
TGGTGGAGCTGGCCACTGCCACGCTTTGCCCGCGCGTGCGGAAGGACATG
CTGACCCGTGCAGTTAACATCGACTACAATGCTGACTCGCCGCGCATCCC
TAAAGTTATGCAGCTTCTGACCGACATCACCCTCGCCGCGCCGAATCGCC
TCAACCGCCCAGCGCTGCTGGAGCGTCTGCTGCGCATACTGGGTTACTCC
ATCACGGGCCACGTGCGCGAGGAGATCATCGTATTCCTTCTAGGCCGCAG
CGCGCGCAACGGCAAGGGCATCATCGAGAGCCTGCTGCAGCAGGTTCTCG
GCTGCATGTTCTACCAGGCGCCGCAGAGCTTTCTGACGGCATGCAAGGCG
GTGTCGGCGGGTGCCGCGTCTTCGCACATGATGGCGCTACGCGGTGCGCG
CGTGGTCCACCTCGACGAGCTACCGGCGGGCGTTGCGTTAGACGCGCAGA
TGATCAAGTACATCAGCGGCGGTGCCGACATCTCGGGGCGAGAGCTGTTT
GGCACGCAGACGTCGTTTAGCCCAACGGCAGTTCCGTGGGCCAACACCAA
CGAGATGCCAGTCATCAAGGCGGAGCCGGCGATAATGCAACGCATTGAGA
TCATCCCCTGCGATGCCAAGTTTCGCATGCCCGGGGATGCCAAGCTCCCC
TATGACGCCAATGATAAGACACACTTCATCAAGAACACCAAACTGCGCGA
AAACCTGCCCGTGGAGGCGTTCCTGGCAGTGGTGGTGCAGGCGGCCAAGA
GGTGGTACGAGGGTGGGCTGGGGGAGCAACCGGCTTGCTGCAAGCTGGCA
TGCGACGCTTTTGCCGCCGAAAACGACACGCTGCAAAGCTGGATCAACGA
CGAGTGTGAGCTGGGACCCAGGGAGGGCGTCGATCCGGCGCTCATCTTGT
GCAGCAGCGCGTTCAGCGGTTACAACAACTACCGCGCGCGCCGGGAGCCG
GCGCTACCGCCAATCAAGAAACGCGACATGCACGAGCAGATGGCGGCCAA
GGGGTTTGCCAAGATAGACGACTACAGGAAGGCGCACAGTCAGTACAATT
TCAAATGCGTGTACGCCGGGCTCAAGTCTGCGGGCGGCTTCTAG
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protein sequence of jgi.p|Trimin1|164352

>Trimin1|164352|e_gw1.31.21.1 ID=Trimin1|164352|e_gw1.31.21.1|Name=jgi.p|Trimin1|164352|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=398bp
RESILKDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLCPRVRKDM
LTRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYS
ITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKA
VSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELF
GTQTSFSPTAVPWANTNEMPVIKAEPAIMQRIEIIPCDAKFRMPGDAKLP
YDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEQPACCKLA
CDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNYRARREP
ALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNFKCVYAGLKSAGGF*
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mRNA from alignment at Contig_31:1071987..1073180-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7457 ID=mRNA_7457|Name=jgi.p|Trimin1|164352|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1194bp|location=Sequence derived from alignment at Contig_31:1071987..1073180- (Tribonema minus UTEX_B_3156 )
CGCGAGTCCATCCTGAAGGACGTATTCAGCACCGTACGCGACGAGGATTT TGAAAAGCTACTCGACGTCAACAAGGACATCTTCAGCTGCCAAAACGGCG TGGTGGAGCTGGCCACTGCCACGCTTTGCCCGCGCGTGCGGAAGGACATG CTGACCCGTGCAGTTAACATCGACTACAATGCTGACTCGCCGCGCATCCC TAAAGTTATGCAGCTTCTGACCGACATCACCCTCGCCGCGCCGAATCGCC TCAACCGCCCAGCGCTGCTGGAGCGTCTGCTGCGCATACTGGGTTACTCC ATCACGGGCCACGTGCGCGAGGAGATCATCGTATTCCTTCTAGGCCGCAG CGCGCGCAACGGCAAGGGCATCATCGAGAGCCTGCTGCAGCAGGTTCTCG GCTGCATGTTCTACCAGGCGCCGCAGAGCTTTCTGACGGCATGCAAGGCG GTGTCGGCGGGTGCCGCGTCTTCGCACATGATGGCGCTACGCGGTGCGCG CGTGGTCCACCTCGACGAGCTACCGGCGGGCGTTGCGTTAGACGCGCAGA TGATCAAGTACATCAGCGGCGGTGCCGACATCTCGGGGCGAGAGCTGTTT GGCACGCAGACGTCGTTTAGCCCAACGGCAGTTCCGTGGGCCAACACCAA CGAGATGCCAGTCATCAAGGCGGAGCCGGCGATAATGCAACGCATTGAGA TCATCCCCTGCGATGCCAAGTTTCGCATGCCCGGGGATGCCAAGCTCCCC TATGACGCCAATGATAAGACACACTTCATCAAGAACACCAAACTGCGCGA AAACCTGCCCGTGGAGGCGTTCCTGGCAGTGGTGGTGCAGGCGGCCAAGA GGTGGTACGAGGGTGGGCTGGGGGAGCAACCGGCTTGCTGCAAGCTGGCA TGCGACGCTTTTGCCGCCGAAAACGACACGCTGCAAAGCTGGATCAACGA CGAGTGTGAGCTGGGACCCAGGGAGGGCGTCGATCCGGCGCTCATCTTGT GCAGCAGCGCGTTCAGCGGTTACAACAACTACCGCGCGCGCCGGGAGCCG GCGCTACCGCCAATCAAGAAACGCGACATGCACGAGCAGATGGCGGCCAA GGGGTTTGCCAAGATAGACGACTACAGGAAGGCGCACAGTCAGTACAATT TCAAATGCGTGTACGCCGGGCTCAAGTCTGCGGGCGGCTTCTAG
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Coding sequence (CDS) from alignment at Contig_31:1071987..1073180-

>mRNA_7457 ID=mRNA_7457|Name=jgi.p|Trimin1|164352|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1194bp|location=Sequence derived from alignment at Contig_31:1071987..1073180- (Tribonema minus UTEX_B_3156 )
CGCGAGTCCATCCTGAAGGACGTATTCAGCACCGTACGCGACGAGGATTT
TGAAAAGCTACTCGACGTCAACAAGGACATCTTCAGCTGCCAAAACGGCG
TGGTGGAGCTGGCCACTGCCACGCTTTGCCCGCGCGTGCGGAAGGACATG
CTGACCCGTGCAGTTAACATCGACTACAATGCTGACTCGCCGCGCATCCC
TAAAGTTATGCAGCTTCTGACCGACATCACCCTCGCCGCGCCGAATCGCC
TCAACCGCCCAGCGCTGCTGGAGCGTCTGCTGCGCATACTGGGTTACTCC
ATCACGGGCCACGTGCGCGAGGAGATCATCGTATTCCTTCTAGGCCGCAG
CGCGCGCAACGGCAAGGGCATCATCGAGAGCCTGCTGCAGCAGGTTCTCG
GCTGCATGTTCTACCAGGCGCCGCAGAGCTTTCTGACGGCATGCAAGGCG
GTGTCGGCGGGTGCCGCGTCTTCGCACATGATGGCGCTACGCGGTGCGCG
CGTGGTCCACCTCGACGAGCTACCGGCGGGCGTTGCGTTAGACGCGCAGA
TGATCAAGTACATCAGCGGCGGTGCCGACATCTCGGGGCGAGAGCTGTTT
GGCACGCAGACGTCGTTTAGCCCAACGGCAGTTCCGTGGGCCAACACCAA
CGAGATGCCAGTCATCAAGGCGGAGCCGGCGATAATGCAACGCATTGAGA
TCATCCCCTGCGATGCCAAGTTTCGCATGCCCGGGGATGCCAAGCTCCCC
TATGACGCCAATGATAAGACACACTTCATCAAGAACACCAAACTGCGCGA
AAACCTGCCCGTGGAGGCGTTCCTGGCAGTGGTGGTGCAGGCGGCCAAGA
GGTGGTACGAGGGTGGGCTGGGGGAGCAACCGGCTTGCTGCAAGCTGGCA
TGCGACGCTTTTGCCGCCGAAAACGACACGCTGCAAAGCTGGATCAACGA
CGAGTGTGAGCTGGGACCCAGGGAGGGCGTCGATCCGGCGCTCATCTTGT
GCAGCAGCGCGTTCAGCGGTTACAACAACTACCGCGCGCGCCGGGAGCCG
GCGCTACCGCCAATCAAGAAACGCGACATGCACGAGCAGATGGCGGCCAA
GGGGTTTGCCAAGATAGACGACTACAGGAAGGCGCACAGTCAGTACAATT
TCAAATGCGTGTACGCCGGGCTCAAGTCTGCGGGCGGCTTCTAG
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