mRNA_7457 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: A0A835Z1H9_9STRA (SF3 helicase domain-containing protein (Fragment) n=6 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H9_9STRA) HSP 1 Score: 709 bits (1829), Expect = 4.540e-257 Identity = 356/366 (97.27%), Postives = 361/366 (98.63%), Query Frame = 1 Query: 16 KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLCPRVRKDMLTRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKAEPAIMQRIEIIPCDAKFRMPGDAKLPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEQPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNYRARREPALPPIKKRDMHEQMAAKGFAK 1113 KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATL PRVRKDMLTRAVNIDYNADSPRIP+VMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAG+ASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMP+IKAEPAIMQRIEIIPCDAKFR PGDAK PYDANDKTHFIKNTKLRENLPVEAFLA VVQAAKRWYEGGLGE+PACCKLACDAFAAENDTLQSWINDECELGPREG DPALILCSSAFSGYNNYRAR+EPALPPIKKRDMHEQMAAKGFAK Sbjct: 1 KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGSASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAGVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK 366
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: A0A835YS19_9STRA (D5_N domain-containing protein n=5 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS19_9STRA) HSP 1 Score: 716 bits (1849), Expect = 1.050e-250 Identity = 365/397 (91.94%), Postives = 373/397 (93.95%), Query Frame = 1 Query: 1 RESILKDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLCPRVRKDMLTRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKAEPAIMQRIEIIPCDAKFRMPGDAKLPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEQPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNYRARREPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNFKCVYAGLKSAGGF 1191 RE+ILKDVFST+RDEDFEKLLDVNKDIFSCQNGVVELATATL PRVRKDMLTRAVNIDYNADSPRIP+VMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLG SARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALR G +DAQMIKYISGGADISGRELFG QTSFSPTAVP ANTNEMP+IKAEPAIMQRIEIIPCDAKFR PGDAK PYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGE+PACCKLACDAFAAENDTLQSWINDECELGPREG DPALILCSSAFSGYNN RAR+EPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQ N KCVYAGLKSAGG+ Sbjct: 601 REAILKDVFSTIRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRAT---------GGRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNSRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQDNCKCVYAGLKSAGGY 988
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: A0A835Z1L1_9STRA (D5_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1L1_9STRA) HSP 1 Score: 202 bits (514), Expect = 1.120e-57 Identity = 143/388 (36.86%), Postives = 199/388 (51.29%), Query Frame = 1 Query: 34 VRDEDFEKLLDVNKDIFSCQNGVVELATATLCPRVRKDMLTRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKAEPAIMQRIEIIPCDAK----FRMPGDAKLPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEQPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNYRARREPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNFKCVYAGLKSAG 1185 VRD+ F LLD +KD+ S +GVV+L TATL PRVR D L A++ ++ + P + + + + D+TL+ RL RP LE + R++GYSITGH REEIIV +G A N KG++ LL VL ++Y AP+S + AGAASS M AL G R+ +DE+P D Q + ++GGA I REL+ Q SF N N ++ A ++RI P D + M G A D + H + + K++ NL AF + V AK+WYE GLG P CC +N + WI + CE+G EG L +S +N++ A R P I +M +GF R +Q K GLK AG Sbjct: 11 VRDKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLS--ERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGA-NSKGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEMPDEPLNDTQF-RLLAGGAGIPARELYSAQASFKNLCQIILNFNFPVQMRITHATLRRIMACPFDMQALPVVPMSGAA---LDPTNPRHILLDIKMKGNLSRAAFFSWAVAGAKKWYEEGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVG--EG------LMASTKMAWNDFCASR-PEGNNITNASFRVEMGRRGFHIAQATR---TQLRDKRCCHGLKIAG 379
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: A0A1L9GPG1_9BURK (SF3 helicase domain-containing protein n=1 Tax=Polynucleobacter sp. MWH-Adler-W8 TaxID=1819727 RepID=A0A1L9GPG1_9BURK) HSP 1 Score: 117 bits (293), Expect = 7.990e-25 Identity = 102/376 (27.13%), Postives = 175/376 (46.54%), Query Frame = 1 Query: 58 LLDVNKDIFSCQNGVVELATATLCPRVRKDMLTRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKAEP-AIMQRIEIIPCDAKFRMPGDAKLPYDANDKTHFIKNTKLRENLPVEA--FLAVVVQAAKRWYEGGLGEQPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNYRARREPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNFKCVYAGLK 1176 LL+ + + +NGVV+L T L ++T+ N +Y D+ + P+ ++ L ++ AL++ + R+LGY+ TG V EEI+V G A NGK ++ +++Q V G S L + + + S + L G R + L+E+ +G LD Q++K ++G IS R L+ ++ P+ W TN PV+K + I +R+ +IP KF A++ D N L E L EA LA ++Q A +WY+GGL P K + E+D L ++ + E D A + + + Y ++ R P+ K + +++ +G ++ N K Y G+K Sbjct: 462 LLNHDAYLLGVKNGVVDLKTGMLIQPNPTMLMTKQCNANYLTDT-QCPQWLKFLNEVFQG------NQALVDSIQRLLGYTFTGSVTEEIMVICYGFGA-NGKSVMSNVIQHVAGSYGKTGSPSLLKS-RRDDDSSPRSDIAGLAGYRYISLNEMQSGDRLDEQVVKLLAGREAISARALYKDHMTYKPSGKAWLKTNHKPVVKEDDDGIWRRLVVIPFGRKF-----AEVERDPN----------LEEKLTQEADGILAWIIQGAVKWYQGGLSICPTI-KQESTEYRTESDLLGHFLEERVEFD-----DAARAIETDVYFFYQSWC--RANGTNPLSKIRLTQKLKERGVRQLPS--------NGKRYYLGIK 797
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: A0A1Y1IMX7_KLENI (SF3 helicase domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMX7_KLENI) HSP 1 Score: 115 bits (289), Expect = 2.760e-24 Identity = 101/355 (28.45%), Postives = 160/355 (45.07%), Query Frame = 1 Query: 22 VFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLCPRVRKDMLTRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRI-LGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAV---SAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIK-AEPAIMQRIEIIPCDAKFRMPG--DAKLPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGG--------LGEQPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNYRAR 1041 V S + D + KL+D + D C NGV++L T L + TR+ + Y S + + D+ N + R L++ LGY++TGH EEI G + NGK ++ LQ+ G Y P S KA + GAASSH++AL+GAR+ DE +++ IK ++GG ++ RELF SF PT TN P I A+ +++R+ ++P +++ D P+ TH T L + E L VV+ + WY L PA A D + E D ++ ++ + C++GP A +L ++ +AR Sbjct: 516 VTSVLYDPEMIKLMDCDIDSVGCPNGVLDLRTGILSFAHPSQLCTRSTGVRYMGLSHNTDRFDAFVMDL-------FNSDESIVRWLQLFLGYALTGHTSEEIFCIWYGAGS-NGKSALKMALQKAFGS--YYTPMSKDCIIKAGGKRAEGAASSHLVALKGARLALCDESEESQVINSACIKEMTGGGAVTCRELFQKCESFVPTHANVLLTNHKPSIADADGGLLRRVSLLPFRNSYKVAEEVDPNDPHSKPQSTHL--KTWLESSEGAEECLVWVVRGSVEWYARQSANPAAKVLAPLPAPMAAAFDEYLREFDDMRMFLKEFCDIGPTFVAPSADLLARFNAEMNSDLKAR 858
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: UPI000AB7246B (Uncharacterized protein n=2 Tax=Croceicoccus mobilis TaxID=1703339 RepID=UPI000AB7246B) HSP 1 Score: 112 bits (279), Expect = 5.010e-23 Identity = 97/301 (32.23%), Postives = 142/301 (47.18%), Query Frame = 1 Query: 61 LDVNKDIFSCQNGVVELATATLCPRVRKDML-TRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKAEP-AIMQRIEIIPCDAKFRMPG-----DAKLPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGG---LGEQPACCKLACDAFAAENDTL 933 LD N + NGVV+L T L P R DML TR DY+ + P+ +Q L ++ A + + R LGY++TG EEIIVF +G A NGK I +++ +++G AP S L + G M L GAR+V ++ELPAG+ +D Q +K ++G IS REL+ +F P W TN P+IK + I +RI ++P KF +AKL + N ++ + L+ + A +R Y LGE A C +A A + L Sbjct: 450 LDANPMLLGVGNGVVDLTTGALVPN-RSDMLITRHCEADYDM-AATCPRWVQFLDEVFAGDQ------ATIHSVQRSLGYTLTGLNTEEIIVFCIGFGA-NGKSIFGNIVNRIIGGYSKVAPHSLLATRRRDDHGPRGDIAM-LEGARLVSVNELPAGMQMDEQAVKALAGREPISARELYEGFRTFDPRFTVWVRTNHRPIIKGDDDGIWRRIIVLPFRQKFEGASCDKHLEAKLWAERNGILRWMIEGARQYLATGNLSLSPTILAEQRQYRSDSDLLGEFLADCTIADPAGRVHDQEL 740
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: A0A257JK46_9PROT (SF3 helicase domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium PA3 TaxID=2015571 RepID=A0A257JK46_9PROT) HSP 1 Score: 110 bits (276), Expect = 7.270e-23 Identity = 103/377 (27.32%), Postives = 172/377 (45.62%), Query Frame = 1 Query: 61 LDVNKDIFSCQNGVVELATATLCPRVRKDMLTRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKAEP-AIMQRIEIIPCDAKFRMPGDAKLPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEQPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNYRARREPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNFKCVYAGLKSAGG 1188 LD + NGVV+L L P +TR D++ S + P ++ L + ++ LL LGY++TG+ EEI++F +G A NGK I +++ +LG AP L + + G + M L GAR+V ++ELPAG+ LD Q++K ++G IS R L ++ P PW TN P++K + I +RI I+P F +++ ++ LRE + LA +V+ A+R+ GL PA K + ++D L ++ EC A + + F + N+ ++ + P K+ +++ +GF D N K Y GL+++GG Sbjct: 195 LDAKPLLLGVGNGVVDLRRKRLLPNEPGYFITRYCYADFDP-SAQCPSWLRSLDAMFQGDTATIDAVQLL------LGYTLTGYSTEEIMIFCVGFGA-NGKSIFGNVVAAILGDYSRTAPSQLLASRRTDDHGPRNDMAM-LDGARLVSINELPAGMHLDEQVVKQLAGREPISARFLHKEYFTYEPRFTPWVRTNHKPIVKGDDEGIWRRIVILPFRRTFA----------PHEQDPHLEGKLLRER---DGILAWMVEGAQRYLREGLKLSPAM-KRELAQYRTDSDMLGEFLA-ECTAT----ATGARVEQKTLFLSWQNWC--KDNGVQPGSKKTFTQRLKERGFPPKDS--------NGKRYYQGLRTSGG 533
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: A0A3C1SNC0_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3C1SNC0_9GAMM) HSP 1 Score: 110 bits (276), Expect = 1.260e-22 Identity = 83/300 (27.67%), Postives = 142/300 (47.33%), Query Frame = 1 Query: 61 LDVNKDIFSCQNGVVELATATLCPRVRKDMLTRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKA-EPAIMQRIEIIPCDAKFRMPGDAKLPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEQPACCKLACDAFAAENDTLQSWINDEC 957 LD + + + +NG ++L+ TL R D+LT I Y D+ P + L+++ + L+ + R +GYS+TG VRE++++ G + NGK + ++++++LG + QA L A + + + G R+V E G + ++K ++GG I+ R +F +F PT W +TN P I+ + AI +RI +IP + KF +PG+ + D KL + +P +A V+ W GL P K A + E D L +W+ D C Sbjct: 444 LDKGRFLLNAKNGTIDLSAGTLRGHRRVDLLTHDTEIVYRPDAAA-PTWERFLSEVFDGDAD------LIRFVQRAVGYSLTGDVREQVLLICHGNGS-NGKSVFLNIVRKLLGKLALQAAPDLLMADRHRRHPTEQADLF---GKRLVVCQETAEGRRFNEALVKQLTGGDAITARRMFEDNWTFEPTHKLWLSTNHRPEIRGTDHAIWRRIRLIPFNVKFHIPGEGEPVKDTG------MEAKLTDEMP--GIMAWAVRGCLDWQREGL-RAPEAVKAATANYQQEQDVLAAWLADCC 723
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: A0A4P6JVW9_9CHLR (SF3 helicase domain-containing protein n=1 Tax=Ktedonosporobacter rubrisoli TaxID=2509675 RepID=A0A4P6JVW9_9CHLR) HSP 1 Score: 110 bits (275), Expect = 1.980e-22 Identity = 91/320 (28.44%), Postives = 145/320 (45.31%), Query Frame = 1 Query: 79 IFSCQNGVVELATATLCPRVRKDMLTRAVNIDYNADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAV-SAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKA-EPAIMQRIEIIPCDAKFRMPGDAKLPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEQPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNY 1032 + + +GV++L T L P +D + + P+ Q L +I P+R + A L+RL GYSITG E + L G RNGK + ++L++VLG T+ S GA + H+ L+G R++ +E G L+ IK+++GG++IS R+L G Q SF PT + TN P A + A +R +I D K R K Y+ + + K + LA +V+ RW + GL P+ L + + E D L ++I D C + P A + S ++ Y + Sbjct: 570 LLATPSGVLDLRTGQLRPGRPEDFIRTVCPTKWTGLETPCPRFEQFLQEIFEDKPDRTSVIAFLQRLF---GYSITGLTCEAVFPILFGEEGRNGKDTLLNVLREVLGPHAGAVSHDVFTSSDRFRSGGAPTPHLCDLQGKRLIWGNETRQGECLNVAQIKWLTGGSEISARQLHGEQFSFQPTHLMLLMTNYKPQADARDKAFWERACLI--DFKMRFVDRPKETYERKKDSTLLGRLKAERS----GILAWLVRGCLRWQQVGLNT-PSSVLLWTERYREEEDNLLAFIGDCCIVRP-----DAEVRASELYNAYKEW 874
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Match: A0A3D2VPM9_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3D2VPM9_9GAMM) HSP 1 Score: 107 bits (268), Expect = 1.060e-21 Identity = 92/320 (28.75%), Postives = 140/320 (43.75%), Query Frame = 1 Query: 61 LDVNKDIFSCQNGVVELATATLCPRVRKDMLTRAVNIDY--NADSPRIPKVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKA-EPAIMQRIEIIPCDAKFRMPGDAKLPYDANDKTHFIKNTKLRENLPVE--AFLAVVVQAAKRWYEGGLGEQPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCS 1005 LD + + NG V+L T L P R D+LT V I Y NA +P T L++ + R +GYS+TG VRE++++ G + NGK + ++L+++LG + QA L A K + + G R++ E G + ++K ++GG I R + F+PT W +TN P IK + AI +RI +IP + KF G+ + KN + L E LA V W GLG+ A + A + E D L +WI + C +G R A + S Sbjct: 219 LDKGHFLLNASNGTVDLTTGVLRPHERADLLTHDVEIPYLQNATAP----AWLAFLHSTFGGD-----ADLIQFVQRAVGYSLTGDVREQVLLICHGVGS-NGKSVFLNILRKLLGGLAIQAAPDLLMADKQRRHPTEQADLF---GKRIIVCQETGEGRRFNETLVKQLTGGDGIRARRMHEDFWEFNPTHKLWLSTNHKPEIKGTDYAIWRRIRLIPFNVKFTDDGEPR------------KNPDMERQLTAELPGILAWAVAGCLDWQRNGLGKAEAV-EAATANYQQEMDVLAAWIGECCVVGKRFEAKAADLYAS 512 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164352 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_7457 ID=mRNA_7457|Name=jgi.p|Trimin1|164352|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1194bp|location=Sequence derived from alignment at Contig_31:1071987..1073180- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CGCGAGTCCATCCTGAAGGACGTATTCAGCACCGTACGCGACGAGGATTTback to top protein sequence of jgi.p|Trimin1|164352 >Trimin1|164352|e_gw1.31.21.1 ID=Trimin1|164352|e_gw1.31.21.1|Name=jgi.p|Trimin1|164352|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=398bp RESILKDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLCPRVRKDMback to top mRNA from alignment at Contig_31:1071987..1073180- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_7457 ID=mRNA_7457|Name=jgi.p|Trimin1|164352|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1194bp|location=Sequence derived from alignment at Contig_31:1071987..1073180- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_31:1071987..1073180- >mRNA_7457 ID=mRNA_7457|Name=jgi.p|Trimin1|164352|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1194bp|location=Sequence derived from alignment at Contig_31:1071987..1073180- (Tribonema minus UTEX_B_3156 )back to top |