mRNA_7348 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|164369 vs. uniprot
Match: A0A836CEB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEB6_9STRA) HSP 1 Score: 787 bits (2033), Expect = 3.820e-287 Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 1 Query: 1 MGLSRKRPAHVAWEDTLGRWVCLQTSGQGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEPPLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACASPPSLGVLAARLVRAAXXXXXXXXXXXXXXXXXXXRHKRHLPSEVADAVLHFNQHAMGLAT 1236 MGLSRKRPAHVAWEDTLGRWVCLQTSGQGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEPPLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACASPPSLGVLAARLVRAAXXXXXXXXXXXXXXXXXXXRHKRHLPSEVADAVLHFNQHAMGLAT Sbjct: 1 MGLSRKRPAHVAWEDTLGRWVCLQTSGQGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEPPLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACASPPSLGVLAARLVRAAXXXXXXXXXXXXXXXXXXXRHKRHLPSEVADAVLHFNQHAMGLAT 412
BLAST of jgi.p|Trimin1|164369 vs. uniprot
Match: D7FP90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP90_ECTSI) HSP 1 Score: 484 bits (1245), Expect = 2.750e-167 Identity = 226/349 (64.76%), Postives = 274/349 (78.51%), Query Frame = 1 Query: 55 RWVCLQTSGQGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEPPLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATW-RAAAALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACASPPSLGVLAARLVRA 1098 +W L TSG PSPRSGHDVVVIG KAYLFGGCGGE DQI CLNDVY F+L+ H+W+ V V G+ PLPRASFGMCA P+P +++VAGGTGVEMDSLRAD+VE++ R W +++TDSEETPC+FYGQS+CTYG++LLLFGGSTG+HYTNDL+EYN T +W++L T+GR P+PRYKHQAV+VG MYVIGGGCFKPEQS ID++ LDL +L W+E G++PK+RVAHSC +DA T TI+LWGGFTSELSRLQDF+ HC TATW R A A V+G PPARAFH+A FF+ LYVFSGANGDVRYSDVWR+Q ++PPSL +L A +++ Sbjct: 36 QWTKLNTSGDSPSPRSGHDVVVIGHKAYLFGGCGGEQ-DQITCLNDVYVFNLELHRWSKVTVKGDAPLPRASFGMCAGPAPG-TLIVAGGTGVEMDSLRADVVEYNVPNRTWTQILTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYTNDLFEYNVRTNKWKRLVTSGRMPSPRYKHQAVVVGHKMYVIGGGCFKPEQSGIDLYCLDLRSLVWEETTMKGELPKARVAHSCSFDAETDTIYLWGGFTSELSRLQDFFGFHCPTATWVRMAEEPTQAPVAG------GATDLVGAPPARAFHSAAFFQGGLYVFSGANGDVRYSDVWRFQVRSTPPSLSMLVAHKIKS 376
BLAST of jgi.p|Trimin1|164369 vs. uniprot
Match: D7FP81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP81_ECTSI) HSP 1 Score: 475 bits (1223), Expect = 3.950e-164 Identity = 234/394 (59.39%), Postives = 282/394 (71.57%), Query Frame = 1 Query: 46 TLGRWVCLQTSGQGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEPPLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAW--DEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACASPPSLGVLAARLVRAAXXXXXXXXXXXXXXXXXXXRHKRHLPSEVADAVLHFNQHA 1221 T+GRWV LQTSG+ PSPRSGHDV VIG KAYLFGGCGG+ DQI CLND+Y FDL H+W G+ RASFGMC P+P +++VAGGTGVEMDSLRAD+VE++TRTR W V+TDSEETPC+FYGQS+CTYG++LLLFGGSTG+HY+NDL+EYN + RWRKLTTTGRKP+PRYKHQAV VG MYVIGGGCFKPEQS+ID++ LDL TL W DE GD+PK+RVAHSC +D G I+LWGGFT ELSRL DFY +C++A WR V+ G PPARAFH+A F + ALY+FSGANGD+RY+DVWRYQ SPPSL VLA++++ + K +P EV + V H N++A Sbjct: 28 TMGRWVRLQTSGRPPSPRSGHDVAVIGNKAYLFGGCGGDE-DQITCLNDMYVFDLQLHRWERAVPKGDSIHARASFGMCQGPTPG-TVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKLTTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRL------VMEG----------GDASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPSLAVLASKVL----------LEESGLNTNLELKFKNKVPDEVIEGVKHMNEYA 393
BLAST of jgi.p|Trimin1|164369 vs. uniprot
Match: A0A836CQE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQE2_9STRA) HSP 1 Score: 455 bits (1170), Expect = 6.410e-156 Identity = 233/390 (59.74%), Postives = 282/390 (72.31%), Query Frame = 1 Query: 55 RWVCLQTSGQGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEP-PLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACASPPSLGVLAARLVRAAXXXXXXXXXXXXXXXXXXXRHKRHLPSEVADAVLHFNQHA 1221 +WV LQTSG PSPRSGHDV V+G K YLFGGCGGE ND I CLND+YTFDLD+H+W V G+ P RASFGMCA P+ + +I+VAGGTGVEMDSLR+D++EFDTRT+ W ++ D E+ P RFYGQ++C YG LLLFGGSTG+HYTNDL+EYN TT WRKL TTG++P+PRYKHQAV+VG +MYVIGGGCFKPEQ+ ID++RLDL TL WD A G+VP++RVAHSC +D T TI+LWGGFT ELSRLQDF+ A W A P + XXXXXXXXX P ARAFH+A F + ALYVFSGANGDVRY+DVWR++ ++PP+LGVLAAR + + +P EV D VL+ N+ A Sbjct: 29 QWVKLQTSGTVPSPRSGHDVAVVGSKVYLFGGCGGE-NDAINCLNDMYTFDLDSHRWETVTAKGDSVPSARASFGMCAGPAAN-TIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEW--AEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARALLHTRSGVQHMMCL-----------ETFVPQEVLDGVLNMNESA 403
BLAST of jgi.p|Trimin1|164369 vs. uniprot
Match: A0A835ZFC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC9_9STRA) HSP 1 Score: 435 bits (1118), Expect = 7.190e-148 Identity = 231/397 (58.19%), Postives = 275/397 (69.27%), Query Frame = 1 Query: 55 RWVCLQTSGQGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEP-PLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVSGVVXXXXXXXXXXXL----PPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACASPPSLGVLAARLVRAAXXXXXXXXXXXXXXXXXXXRHKRHLPSEVADAVLHFNQHAMGL 1230 RWV LQ G PSPRSGHDV V+G K YLFGGCGGE ND I CLND+YTFDLD H W + GE P RASF MC+ P ++++VAGGTGVEMDSLR+DI++FDTRTR W ++ D ++ P +FYGQ++C YG+ LLLFGGSTG+HYTNDL+EYN T WRKL T GR+P+PRYKHQAV+VG MYVIGGGCFKPEQS ID++ L+L TL W + ++G VP++RVAHSC +D T TI+LWGGFT ELSRLQDFY H T W P XXXXXXXXXXX P ARAFH+A F++ ALYVFSGANGDVRY+DVWRY+ +SPP+LGVLA R + + LP EV DAVL N+ A L Sbjct: 34 RWVKLQVCGTVPSPRSGHDVAVVGNKLYLFGGCGGE-NDAINCLNDMYTFDLDRHVWELIPHRGEEMPTARASFAMCSGPD-EKTLIVAGGTGVEMDSLRSDILQFDTRTRRWIKLHRDGDDAPSKFYGQTVCRYGDVLLLFGGSTGLHYTNDLFEYNVVTNCWRKLVTQGRRPSPRYKHQAVVVGDFMYVIGGGCFKPEQSAIDMYCLNLRTLVWAQPRSAGAVPRARVAHSCSFDPETCTIYLWGGFTGELSRLQDFYAYHAPTGEWTEIRTAPPXXXXXXXXXXXXXXXXXXXXXVAPYARAFHSAVFYKGALYVFSGANGDVRYNDVWRYRMRSSPPALGVLAGRALLHSRLGVQQMMALEAL-----------LPHEVLDAVLTMNESASRL 417
BLAST of jgi.p|Trimin1|164369 vs. uniprot
Match: A0A835Z314_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z314_9STRA) HSP 1 Score: 354 bits (908), Expect = 2.880e-116 Identity = 194/422 (45.97%), Postives = 233/422 (55.21%), Query Frame = 1 Query: 10 SRKRPAHVA--WEDTLGRWVCLQTSGQGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEPPLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACASPPSLGVLAARLVRAAXXXXXXXXXXXXXXXXXXXR------------HKRHLPSEVADAVLHFNQHAMGLA 1233 S+KR A A W TLGRWVCL+TSG+GP PRSGH VV G A+LFGGCG D++A LND Y+F+L+THQW V VN EPP R+SF MCA P RSI VAGGTG + DSL DIVEFDT R W RVV D +TP YGQS C YG SL+LFGG++G+ Y N G F P+ S +DV+ L+L TL W V TSG+ P+SRVAH+C +D T TI +WGGF+S L RLQDF+ LHC TATW + PP RAFHAACF + ALY+F GA+GD RY+DVWRY SPPSLGVLAAR +RA + LP+EVA A+ FN++A L+ Sbjct: 5 SKKRAAVSAPTWGSTLGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVV-DVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETS--------------------NQPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQLRATEGDDEKPVKPRKNHLSDNAATASRKCISQSAGNSVQLPAEVASALCGFNKYATSLS 405
BLAST of jgi.p|Trimin1|164369 vs. uniprot
Match: A0A836CLJ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ1_9STRA) HSP 1 Score: 319 bits (817), Expect = 4.320e-101 Identity = 162/340 (47.65%), Postives = 215/340 (63.24%), Query Frame = 1 Query: 88 PSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNG-EPPLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTG-TIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACA-SPPSLGVLAARLVRA 1098 PSPRSGH V ++G KAYLFGGCG + + CLND+++FD++T +W V G E P R S MCA +++GG G + D LR+D+ F T TR W +++ E P GQS C + +++L FGGSTG+ Y+N L++YN T RW++L T G +PTPRYKHQA I G+SMYVIGGGCFKP IDVHRLDL T+ W +VAT G VP +RVAH+C YD+ G +++WGGFT+ L L++FY L +T TW A AL + P AR+FH + F ++YVFSG+NG ++SDVWRYQ +PP L LAAR + A Sbjct: 76 PSPRSGHTVCLVGGKAYLFGGCGRSAGVEDKCLNDLHSFDVETLRWERVETRGAEQPAVRRSAAMCALDDGR--FLLSGGAGDDPDHLRSDLYLFVTHTRVWTKLLEGPEAKPFCLCGQSACLWQDTILFFGGSTGLEYSNALHQYNLKTNRWQQLATLGPRPTPRYKHQAFIHGSSMYVIGGGCFKPLCEDIDVHRLDLTTMTWRQVATRGSVPMARVAHTCAYDSSEGGAVYMWGGFTAGLQCLRNFYRLSLDTHTWTAIPALRTELS----------------PSARSFHGSIFSAGSVYVFSGSNGSEKFSDVWRYQQVRQTPPPLLTLAARALLA 397
BLAST of jgi.p|Trimin1|164369 vs. uniprot
Match: A0A7S2XVZ9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVZ9_9STRA) HSP 1 Score: 300 bits (769), Expect = 2.390e-95 Identity = 151/348 (43.39%), Postives = 202/348 (58.05%), Query Frame = 1 Query: 49 LGRWVCLQTSGQGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEPPLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACASPPSLGVLAARLV 1092 L W + +G RSGH +VV K YLFGGCGGES ++ +CL+D FD T W+AV GEPP RASFGM P P +++VAGGTG +MD+ +DI E++ + WR ++ + C++YGQS+C Y +L FGGS G Y+N LY Y+ + + TTG+ P PRYK Q ++V S+ VIGGG ++P IDVH LDL TL W + TSG+VP+ RVAH+C YD T I+LWGGF L RL DF+ L T W +L P RAFH +C + + Y+F GA+GD R+SDVWR++ +PPSL + A V Sbjct: 30 LKTWQKVPCAGTITGGRSGHGMVVYQSKVYLFGGCGGESVEERSCLSDFLVFDFSTQSWSAVQTRGEPPHARASFGMSRGPDPG-TLIVAGGTGQDMDTF-SDIYEYNISSSTWRLLIKGEKANFCKYYGQSICEYKGNLFFFGGSRGRTYSNVLYRYDCAQEEGAAVPTTGKAPCPRYKQQMMVVKDSLLVIGGGNYRPPTHQIDVHELDLLTLNWSQWKTSGNVPQGRVAHTCTYDENTHQIYLWGGFNVVLHRLNDFHVLDIATRKWSTIISL-----------------DNQSPRPRAFHCSCLHDGSFYIFGGADGDFRHSDVWRFRTNVTPPSLMSICAGTV 358
BLAST of jgi.p|Trimin1|164369 vs. uniprot
Match: A0A836CI07_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI07_9STRA) HSP 1 Score: 258 bits (658), Expect = 2.310e-79 Identity = 134/345 (38.84%), Postives = 185/345 (53.62%), Query Frame = 1 Query: 58 WVCLQTSGQGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEPPLPRASFGMCARPSPHRSIVVAG--GTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACASPPSLGVLAAR 1086 W +Q +G+GP RSGH VVIG YLFGG +A ND+Y ++ T +W + G P PRA+F +CA P P + +V G G G ++ D+ +DT W+R+ ++ P + YG S C Y LL++GGS+G HY + + +YN W L T G P+ RYKH ++G SMY+IGGG FKP Q +ID+++ + W V G VP R AH C +DA +G I+ +GGF ++R D T R+ A +PPARAFHAA ++ ALYV GA+GDVRY DVWR+ +PP+ VLAAR Sbjct: 7 WTRIQATGEGPLSRSGHGAVVIGDMVYLFGGYR-----DVATQNDLYRLNMRTLEWTHILSKGAWPSPRATFAICAGPEPTQFTIVGGAEGDGGTAGTVSCDVWVYDTTIHEWKRL---TKACPNKVYGASACWYDGRLLVYGGSSGSHYYDGVVQYNPRKDTWHTLITYGDPPSARYKHACGVMGDSMYIIGGGAFKPPQDSIDMYKFNFRNFEWSAVEAEGKVPPGRTAHCCWFDATSGIIYTFGGFDKRMTRQSDLSEYDTLTHNRRSIHA-------------------NNVPPARAFHAAVLYDGALYVLGGADGDVRYGDVWRFAFTTTPPTCQVLAAR 324
BLAST of jgi.p|Trimin1|164369 vs. uniprot
Match: A0A7S2V4S9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4S9_9STRA) HSP 1 Score: 256 bits (654), Expect = 3.590e-78 Identity = 140/359 (39.00%), Postives = 203/359 (56.55%), Query Frame = 1 Query: 10 SRKRPAHVAWEDT--LGRWVCLQTSGQGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEPPLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACASPPSLGVLA 1080 +++ A A ED L W ++ G+ P RSGH + +IG Y+FGGCGG + D AC+ D D+ T W V +GE P PRASF M P SI+V+GGTG ++ L D+ EF+ T W R+++D ++YGQS+C + + FGGS G YTN L ++ T G P RYKHQA++VG++M+VIGGG ++P +DV++L++ T+ W V T+G +PK RVAH YD + I++WGGFTS L RL DF++L ++ W + +G + P RAFH A F++ ++Y+F GA+G R+ D+W+YQ SP SL LA Sbjct: 9 AKRDSATSAPEDNNKLNCWKVVKFQGEHPGARSGHGLAIIGHYLYIFGGCGGPT-DGGACMADFMRMDMKTLTWQNVRSHGENPSPRASFAMVGVPE-RSSIIVSGGTGDDL--LCDDLFEFNIPTGHWCRILSDGNNF-AKYYGQSVCVFRSHVYFFGGSKGTQYTNQLXXXXXXXXXXSEVQTRGTVPDARYKHQALMVGSNMFVIGGGNYRPVNENLDVYKLNMITMEWSCVHTTGCIPKGRVAHVAEYDRLSNKIYVWGGFTSTLHRLHDFFSLALDSMEWECLSEK-----NGWMEKNDRQMKSGPCP--RAFHGAFFYDSSMYIFGGADGQNRHEDMWKYQLRCSPLSLLDLA 355 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164369 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_7348 ID=mRNA_7348|Name=jgi.p|Trimin1|164369|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1239bp|location=Sequence derived from alignment at Contig_31:5116..9602+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGGGCTGAGCAGGAAGCGGCCCGCTCATGTGGCCTGGGAGGACACCCTback to top protein sequence of jgi.p|Trimin1|164369 >Trimin1|164369|e_gw1.31.97.1 ID=Trimin1|164369|e_gw1.31.97.1|Name=jgi.p|Trimin1|164369|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=413bp MGLSRKRPAHVAWEDTLGRWVCLQTSGQGPSPRSGHDVVVIGRKAYLFGGback to top mRNA from alignment at Contig_31:5116..9602+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_7348 ID=mRNA_7348|Name=jgi.p|Trimin1|164369|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4487bp|location=Sequence derived from alignment at Contig_31:5116..9602+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_31:5116..9602+ >mRNA_7348 ID=mRNA_7348|Name=jgi.p|Trimin1|164369|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1239bp|location=Sequence derived from alignment at Contig_31:5116..9602+ (Tribonema minus UTEX_B_3156 )back to top |