mRNA_7231 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|348260
Unique Name	mRNA_7231
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|348260 vs. uniprot
Match: A0A835Z932_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z932_9STRA)

HSP 1 Score: 430 bits (1106), Expect = 8.500e-144
Identity = 473/473 (100.00%), Postives = 473/473 (100.00%), Query Frame = 1

Query:    1 MGCGFAMQVPGSRVRIVKLRPDMATEALARLIGPLVQRDDARVTISRDPTGRRKSQVTIEFTTAQEAVEAVQQLRGVVFDGAQLTVWRLDARDQPMDTPPGPSAANNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGEPADAGNXXXXXXXXXXXXXXXXXGXSAGAAVALGIGAGNNNPAPAAGVAGPIPAALPFAPLAAAAIGGGGVAGSFNFALGDPMHMELQRAAHIDRDAEIRRLKQRCQEQLAVAQQANDIAQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSQLEGEAGRRALEQQXXXXXXXXXXXXXXXXXXXXXXXXLKRARQLSANRPGSTVVTEAAREGGGGSDVAAKGQEWT 1419
            MGCGFAMQVPGSRVRIVKLRPDMATEALARLIGPLVQRDDARVTISRDPTGRRKSQVTIEFTTAQEAVEAVQQLRGVVFDGAQLTVWRLDARDQPMDTPPGPSAANNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGEPADAGNXXXXXXXXXXXXXXXXXGXSAGAAVALGIGAGNNNPAPAAGVAGPIPAALPFAPLAAAAIGGGGVAGSFNFALGDPMHMELQRAAHIDRDAEIRRLKQRCQEQLAVAQQANDIAQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSQLEGEAGRRALEQQXXXXXXXXXXXXXXXXXXXXXXXXLKRARQLSANRPGSTVVTEAAREGGGGSDVAAKGQEWT
Sbjct:    1 MGCGFAMQVPGSRVRIVKLRPDMATEALARLIGPLVQRDDARVTISRDPTGRRKSQVTIEFTTAQEAVEAVQQLRGVVFDGAQLTVWRLDARDQPMDTPPGPSAANNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGEPADAGNXXXXXXXXXXXXXXXXXGXSAGAAVALGIGAGNNNPAPAAGVAGPIPAALPFAPLAAAAIGGGGVAGSFNFALGDPMHMELQRAAHIDRDAEIRRLKQRCQEQLAVAQQANDIAQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSQLEGEAGRRALEQQXXXXXXXXXXXXXXXXXXXXXXXXLKRARQLSANRPGSTVVTEAAREGGGGSDVAAKGQEWT 473

[Close]

BLAST of jgi.p|Trimin1|348260 vs. uniprot
Match: A0A835ZB87_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB87_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 4.260e-10
Identity = 42/88 (47.73%), Postives = 51/88 (57.95%), Query Frame = 1

Query:   13 FAMQVPGSRVRIVKLRPDMATEALARLIGPLVQRDDARVTISRDPTGRRKSQVTIEFTTAQEAVEAVQQLRGVVFDGAQLTVWRLDAR 276
             + +V GSRV I  L+P    E L    G   QR  A V ISRD  G      TI F TAQEA+ A+Q L+ V FDGA+LT+ RLDA+
Sbjct:    1 MSSKVSGSRVHISGLQPYATEEQLGGRFGRFAQRGPAAVEISRDFKGDCDGSATIIFQTAQEAISAIQALKDVEFDGARLTMCRLDAQ 88

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348260 vs. uniprot

BLAST of jgi.p|Trimin1|348260 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835Z932_9STRA	8.500e-144	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZB87_9STRA	4.260e-10	47.73	RRM domain-containing protein n=1 Tax=Tribonema mi...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_21	contig	Contig_21:1242507..1251069 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|348260\|estExt_Genemark1.C_Ctg_210125
Hectar predicted targeting category	other localisation
TranscriptId	348582
Track	FilteredModels1
ProteinId	348260

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348260	gene_7231	Tribonema minus UTEX_B_3156	gene	Contig_21 1242507..1251069 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348260	Trimin1\|348260\|estExt_Genemark1.C_Ctg_210125	Tribonema minus UTEX_B_3156	polypeptide	Contig_21 1242606..1251069 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_7231_9	exon_7231_9	Tribonema minus UTEX_B_3156	exon	Contig_21 1242507..1242690 -
exon_7231_8	exon_7231_8	Tribonema minus UTEX_B_3156	exon	Contig_21 1242760..1242896 -
exon_7231_7	exon_7231_7	Tribonema minus UTEX_B_3156	exon	Contig_21 1243613..1244104 -
exon_7231_6	exon_7231_6	Tribonema minus UTEX_B_3156	exon	Contig_21 1245231..1245539 -
exon_7231_5	exon_7231_5	Tribonema minus UTEX_B_3156	exon	Contig_21 1246247..1246357 -
exon_7231_4	exon_7231_4	Tribonema minus UTEX_B_3156	exon	Contig_21 1247126..1247169 -
exon_7231_3	exon_7231_3	Tribonema minus UTEX_B_3156	exon	Contig_21 1248442..1248545 -
exon_7231_2	exon_7231_2	Tribonema minus UTEX_B_3156	exon	Contig_21 1249630..1249745 -
exon_7231_1	exon_7231_1	Tribonema minus UTEX_B_3156	exon	Contig_21 1251046..1251069 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_7231	UTR3_7231	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_21 1242507..1242605 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_7231	CDS_7231	Tribonema minus UTEX_B_3156	CDS	Contig_21 1251046..1251069 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_21:1242507..1251069-
coding sequence from alignment at Contig_21:1242507..1251069-

spliced messenger RNA

>mRNA_7231 ID=mRNA_7231|Name=jgi.p|Trimin1|348260|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1521bp|location=Sequence derived from alignment at Contig_21:1242507..1251069- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCTGCGGTTTCGCGATGCAGGTCCCAGGATCGCGAGTGCGCATAGT
GAAGCTGCGGCCGGACATGGCAACGGAGGCGCTCGCGCGGCTTATCGGAC
CTTTGGTGCAGCGTGATGATGCGCGGGTGACGATAAGCAGGGACCCTACC
GGCCGCCGCAAGAGCCAAGTGACCATCGAGTTCACTACGGCACAGGAGGC
CGTCGAAGCCGTACAGCAGCTGAGGGGCGTTGTCTTTGATGGAGCTCAAC
TGACAGTGTGGCGGCTGGATGCACGAGACCAACCCATGGACACCCCCCCT
GGCCCAAGTGCTGCCAACAACGGCAGTGGCGGCGACAACAGCGGCAGCGG
CAGCGGCAGCATGAGCGCTGCTGCTGCAAATGGTGCCTCTGCAGCGCAGA
GTGCGGGTGGCTCTGCATCAAGCACTACTGTCGCCGGCGGGCCTGCTGAT
GGCAGCGACAGCGGCGGCGACGGCGGCGGCAGCGGCGCCGGGTCCGACAA
TGACAGCGGCGGCGGCGACGCCGCCGTTGTCATTGTCGCCGCCGCTGCCG
CTGCTGTTCTACAGAGTGCGGGTGGCTCTGCGTCGAGCACCGCCGCACCT
CAAGGTGAGCCTGCCGATGCTGGCAACAATGGCAGTGCCGCCGCCGGCGC
CGCCGCCGCTGCCGGTGCGGCGGCGCCCGGCGGCAGTGCTGGGGCTGCAG
TGGCTTTGGGCATTGGTGCAGGCAACAACAACCCTGCCCCTGCCGCGGGC
GTTGCTGGTCCCATACCTGCGGCACTGCCATTTGCTCCTCTGGCAGCCGC
AGCAATTGGCGGTGGCGGCGTCGCAGGCAGCTTCAACTTTGCACTGGGCG
ACCCCATGCACATGGAGTTGCAGCGCGCGGCGCACATTGACAGAGACGCT
GAGATACGCAGGCTGAAGCAGAGGTGCCAGGAACAGCTGGCAGTGGCACA
GCAGGCCAACGACATTGCGCAGTCGGAGAGGGCGGCAGCACAGCAGGCGG
CGCAGCTCGTCGCTGCGCACGTTGCGCGGTTCGCCGTTCTAGATCAGCGG
GCTGACAGCGACAGAGCGCGCCTTGCGCAAGCCGATCGCGCATGTCAAGG
CAGTGAACAGGCGCTGGCGCAGGCGCAGCTCACGGTGGCTGGCCTGCTGG
ACAGTCACGTACGCGCCGAGAGAGCAGTGGCCGCCGGCTCGCAGCTAGAG
GGCGAAGCCGGCCGGCGCGCCCTGGAGCAGCAACGGGCTCATGAGGCCGC
CGCCGCTAGAGCGTCAGACGAGGCTCAGGCAGCCACCGATGCTGCCAGGC
GCGCTCTCAAGCGCGCGCGCCAGCTGTCTGCCAACAGGCCGGGGAGTACG
GTGGTGACGGAGGCGGCACGGGAAGGCGGCGGCGGAAGCGACGTAGCAGC
AAAGGGACAAGAGTGGACGTAGCAGCGGTAGTGGCGGCAGCTGTTGTTCT
TCATGCACAGCATCCTCGCTTCTCTTTGGTGCCTTAAGTGCGCTGGTAAC
ACTGGAAGCGGCAGTTGTGGC

protein sequence of jgi.p|Trimin1|348260

>Trimin1|348260|estExt_Genemark1.C_Ctg_210125 ID=Trimin1|348260|estExt_Genemark1.C_Ctg_210125|Name=jgi.p|Trimin1|348260|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=474bp
MGCGFAMQVPGSRVRIVKLRPDMATEALARLIGPLVQRDDARVTISRDPT
GRRKSQVTIEFTTAQEAVEAVQQLRGVVFDGAQLTVWRLDARDQPMDTPP
GPSAANNGSGGDNSGSGSGSMSAAAANGASAAQSAGGSASSTTVAGGPAD
GSDSGGDGGGSGAGSDNDSGGGDAAVVIVAAAAAAVLQSAGGSASSTAAP
QGEPADAGNNGSAAAGAAAAAGAAAPGGSAGAAVALGIGAGNNNPAPAAG
VAGPIPAALPFAPLAAAAIGGGGVAGSFNFALGDPMHMELQRAAHIDRDA
EIRRLKQRCQEQLAVAQQANDIAQSERAAAQQAAQLVAAHVARFAVLDQR
ADSDRARLAQADRACQGSEQALAQAQLTVAGLLDSHVRAERAVAAGSQLE
GEAGRRALEQQRAHEAAAARASDEAQAATDAARRALKRARQLSANRPGST
VVTEAAREGGGGSDVAAKGQEWT*

mRNA from alignment at Contig_21:1242507..1251069-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_7231 ID=mRNA_7231|Name=jgi.p|Trimin1|348260|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8563bp|location=Sequence derived from alignment at Contig_21:1242507..1251069- (Tribonema minus UTEX_B_3156 )
ATGGGCTGCGGTTTCGCGATGCAGGTAACTTTAAGCTCATCTTGCAATTT
TGGCTGCCCCTTGGACAGAAACACAAAGGCGACGGGACCTCGGGCGGCGA
CGGCAAAGGGAGAGGAGCAGCGGGCAGGGAGGCGCGCCAAGCAGCACTCC
TGTGGTCAGTACATAGCGCAGTACGCATGATGTGACGCTTTGTGTGCAAA
CGTACACTGTACTCCTCGATCGGAAGTCTCGGAGAAGGCAAATCGAACAC
ACACATTTACAGGCATTCCGCTTTATTCCGCATATGCTGGAGAAAGAACT
CGGGCCCTGACCACTCCTAGCAGCTTCATCTGTGCAATTTTGCGGTCAAC
TTTTGGTGTTTTAGTGCTGTGGCTGATGCTCTTGGCATCAGGGGATGAGA
AGGAGTACTGAATGTTTCCTCACCAAGTACTGCCAGGAAAGCTCAGGAGC
AATGTGGCTGTGGCGTACGCGTCCTCTGCAGCGCTGAGTGCAGCCTTGAT
CCTCAATAAATTGAATGATAAATATGTGTTTGGCGTCTACATCTAGCGGA
GGTGCTTGCATACATGCTGCCTACGTTCTCGGAAGCAAGCTTGGCAGAAG
GATGAGTTAGATTTGCTGGCTGACGTGCCTCAAGTCCTGACGAAGAGTGC
GGTTTGAAGATTATGGATGATTCCACAAAATGTGTAGACCCCGGCATTCA
AGAGCCACAGATTTGCTTCCTCGGCTACACGTGGACCGTGTATCTGCGCA
TCAAGGCGCATCAGTCGGTGTGTGCAAGCATCTGACATGCATGCATCTGG
CCAGTGAATTTGTGTGGCGCACCACAACGGGGCCGGCGCCAGCTGCACCA
ATGACATGCATTTGTCTCTATTGATCATTTTGCCTCGTCGGGCTCTGAGC
GCTGCTGCAAAAGTAATTTGCTCAAAGCGTGAGGCTTTGGCGCTCACGTC
ACTTGGCGCTCACCAGAAATACTCCGTTCTGCTCTGCCTCGCAGCCACAG
CGCCGGCAACTAAGGTTCACGCGGCAGTTGTTGATGCACGTCTCTGCGTC
ACCTGAACCGTACACATGTCACGTGCATACGCTTCAGTTGCACACGCATG
TGTTCCTTCGTATCGCAGACGCGCTCGCAATGCCACGTCAACAAGCGCAC
GCTTGCACGGCGTCCATGGCGGTTTGGATAGTCGCACCTGAGCCGATCCA
TGGTACAAACCTCTAAAAATGTGTAAATAGGGTTAGGGTTAGGGTTAGGG
TTAGGTGCAACCATCCAGGTGAGACCGGATGCAACCGTGCGTGTCTGGCG
CGCTTGCTTTTCGCGTGCATGCAGGTCCCAGGATCGCGAGTGCGCATAGT
GAAGCTGCGGCCGGACATGGCAACGGAGGCGCTCGCGCGGCTTATCGGAC
CTTTGGTGCAGCGTGATGATGCGCGGGTGACGATAAGCAGGTGATGATCA
GCAGCAGCAGTATCTATCAATCTTATCCTGGAGTGATATGTACCGCAATC
GCCGTTCACAAAAGTTGTACATGTGCAGTGCGAGGCAGTCGGCCAGTGCA
TGAGCCCTAACTGCATGTGTAACAGACCCTGCGGGGGTGGATTCCGGTGC
GTTCCTGGGGGCTGCATCTTATGAGCTTGTAGCAATGAGCCTATGCTGTA
CCGCTCTTGTCTCCAAACGCTTGTTGATTCAGGTGCCAAAATCAGGCACG
GCCATTGGACCTCTGCATGCACACACTACACCCGTTTCATGGTGTCAGCG
ACATTACGGGTGTTTTCTTATCGTTGAGTGTGAACTGCTGAGCAGTGGCA
CACCGCTTGGTCCATCAACTAGGGGGTAGGCCCGATGTGCGCCAGGGTGG
GGGGTGGGGGTGTGTGTGTGGGGGGGGGGGTCAGCACTTGACGCGAGCGT
GCGCGCGCGCGCGCGCGTGCGAAGACCGACATGCCTTATTAGTGACCGCA
AATGACCAGCGCGCAGGCGGATGGTGTAGCTGCATGAGGGTAAGCATGGG
GTGCGAAGATACGATGGGTCCTCGCGGTGGTCCCGCAGGTGGTTGGTAAG
CTGCGCAGGGGGTAGGTATTAGGTGGGGGGTAGGGAAGGGGGGGGGATTG
GGGTGGGGGGTGTTGGGGGGGGGAGCTGTAGCTGTAACAGAAGGCGTTCA
CGCATATCTGCTTTCAGTGTCATGGTCCAAGGCTCTGCGCGTTCTGACAG
GTGATCGAACAAGCGATTCCTACAGATGATGCAACTGTGCCTTCCCCTGT
TGCTGCAGCACGTTCACACGAGCATGTGTGCATGCCTGCGTCTCAGATCT
GTGTTCAAGTAGCGCACATCCAGGCACTACGATGCTGCACAGATGTCTCG
CATACACATCGCCTATGTTGGCTCAGTTGCCGGGCACGCACAACCAGTTG
GGGTGGAGTGCTTCTTTTCATGTAAACTGCGGCGTCAGTCTGCAATCACA
GCCATCTTCACCCACCAATGTACGTGCGCCTTATGTGAGTGGCACGATTG
TTGTCATCACGCTTGCCGTCTCAGGGACCCTACCGGCCGCCGCAAGAGCC
AAGTGACCATCGAGTTCACTACGGCACAGGAGGCCGTCGAAGCCGTACAG
CAGCTGAGGGGCGTTGTCTTTGATGGAGGTAAGACTTGTTGAGCGCATAC
ACGAGGTTTTATGAACATGTCGGTGCATTTGTTCGCTTTTGTCCAGATGA
GGACTTCATCGGAAGACGCCCTCTGCGCCCTGCGACAGCCATGTTGCAGT
TGAAGGTCATGCGCTTGTGCTCGTAAAACGCATGTGCGAGCAGCTGCTGG
CACGCACCACTGCCGCATACTGGGAAGCTCTTCCCTGTATTTGTAACAAA
AGGCGGTAGCAGCGCTCAAACATTGCCGCAAGTGCATTTGCATTACTCGG
CCGCGCTCAACAGCCCAAAGTAACAGTGCTCAGCTGACCTGTGTCAGTGT
TCACCTGATGTTTGACGACGGTTGCTGAGACCACTGCCAGCCCAACGCTC
AGTGGCAGCGCTCAACTCGACATCTCCACTCATAACAACATTGAACCTCT
GCAGCCAGCCCACCCTTCACTTATAACCGGATCTCCTTGTCCTAACCCTG
ACCCTAACCCTAACCCTAACCCTAACCCTAATTCTGGTCCTAACCCAAAC
CTTAGCCCTAATCCTAGCCCTAACCCCAATGCCACCCCGAGCCCCCAACC
CTAACCCTAACCGTAATCCTAACCCTACCCCTACCCCTAACCCCAACCCT
GACCCTATGTCGTAACCCTGACCTCACACCTGGATCAAATAAGATGCTCC
GTCGGCGTTTACTGATGCTCAGTCGGCACGCCGACACATGTGCAAATGGC
TGGCATCGCTCAGCCACTGCGTCGTGTGAGCGCTCAGGCATTCATATGGC
ACCTGCAGCGTACGACGGGGACGGTAACATACTAATGTATTAGTTGAAGA
TTGATTGTTGTCGGCTGCTCGACTTGACCCCGATCGTCACCTGTTCAATG
CTCATGAAATGCATATGGACGTATTGATGCATAGGGCAAGATACTTTTAC
CACTCAATGCGCTCAGCACGCCGCCTGTAGTCCCACGACCTCAAGGGAAG
AAGAATTGTTGCCACAGATTCACAAGATTGACAAACCTGTCACGTGCAGC
TTGCAACATTTCACGACATTCTGCCCTTGAAACAGGAGCATGCCATGATA
CTGGACACTCAGCTGCTGCGTGTGACGGCGTGTGACTGTGCGGTGACCTA
TTTGCTGCTGGTGCTGTAGGGATTAGGGTTTTAGAGGTCCCGTCCCTGAG
CCTTTCATTTTCCTGCCCCTGCTCATTGTTGTGCCCTGCATCAATGTTTT
CTGCCTCTACCTGTGCCCTGCATCAATGTTTTCTGCCTCTACCTGTGCAG
CTCAACTGACAGTGTGGCGGCTGGATGCACGAGACCAACCCATGGTGAGT
CCCATGATTTCACTTGAACATCAACCCAAGTTGAGGTCACTGACAGCCCA
TATGTCCTTTCCTACACCACGCTACCGTTTCTCTTTCTTGATGCGGCACG
AAGATGCCAGCAGTAGTGCTAAGACGACCGCCAGGCCGTTTGAGCGCCAC
TTCCAAACGTTGAAAACATTGCTGTAACTGTAGCTGCCCAGCCCTGTACT
TGCGTAGGGTGGAATGAGGCCTGCAATACTGGAGCACTAAGATTGCGGTT
GGGCAACATGGAGTGCCAAGGACCAGTTCACATTTGACGTGTTCATGGTA
GGCTGGAAGTGCTGTAGAGTGAATAGGACCGCATTTCCACAGGTATCATA
CCTGAAGGTCATGATTACAAGTGCAGCATTTTCAAGAGCTGAGGTTAGAC
CTTACGGTTACAATGATGGCTACTTGGACGTCACGACGGCTGCTGAACAT
TTTGTCTGTGTAAGCATTTGAGGGTAGTCAATTATAGTAGGCTTGTGCCA
TGGCCATGTACAGCATGGAGCTGCTTGGGTCGCCACAACGCACACCTGCA
TGCATTTCAGTTAAGGGCGTTCACAACAATGTGGCCATGTAGCGTTTGAT
GGCGGAACGCTTTTTCTCAAGCCAGGCATCAAATGGACCACAAAGTACGA
CATTACCCATGAAACGTTCCCGGCGATATATCATTCAGCTGCTGACTGTG
AAAGTTTCCCATATATGCTCGGTTCATCATGCAATGTCCTGATTGCGGTC
TGAATCGTGCAGGACACCCCCCCTGGCCCAAGTGCTGCCAACAACGGCAG
TGGCGGCGACAACAGCGGCAGCGGCAGCGGCAGCATGAGCGCTGCTGCTG
CAAATGGTGCCTCTGCAGCGCAGGTCAGTGCCTGTGTTACCACTGACTTG
CGTTGTAACACATTAAGCCATAGAAGGGCCTGAGGTACCCACCACACAAT
GCTGCCTCTCACTTCCCTCCCCTCCCCTATCCTTCGTATATAACGGTCGT
GTGTGCGTGCGTGTGGGTGTGGAAATGTATACATGCACCTTGCGCGGGAA
CATTCAGGTGTGTATGTGTGTGGGTGGGTGTGGGAATGTATGCATGCGCC
TTGCGCGGTAAAACTCAGAATATTATTCGCTCTCACGTCATCACACATAC
GACAATAGCTGCAGCAGGCTCACGTGATTTTGCAAATTCCATGCGCCACC
ACGCATTGAGAAGGCACTTGTGGACCAAAAGGTAGGCTTGCGATGGGGGG
CCACAACTGGAGCAAATTGACAGGCGAGTACATCTCGCCCGGTCACCAAT
TGTAGCTTGACTCGGCATGTGTTGGCGCCTATACACCATACACTGAGACT
GTATGACCGGTTAATGCATTGTGTGCGTACCGTGCAGCACATTGCTGGTG
TTGCCGCTCGACGGTCGTGACCGCAACCGTTGTAAGCCTCTGAGGAGCCT
CAAGGCTTGGAGCTATACAATCAACCCGATACCCCAACAGACCAGCCGCT
GCGGCACTCGTCAACATAAGGCACTTAAGACACTCGGGCATCTCTCACAT
GAACTGCTCCCTGACATAAGTGTGCTGCAGAGTGCGGGTGGCTCTGCATC
AAGCACTACTGTCGCCGGCGGGCCTGCTGATGGCAGCGACAGCGGCGGCG
ACGGCGGCGGCAGCGGCGCCGGGTCCGACAATGACAGCGGCGGCGGCGAC
GCCGCCGTTGTCATTGTCGCCGCCGCTGCCGCTGCTGTTCTACAGAGTGC
GGGTGGCTCTGCGTCGAGCACCGCCGCACCTCAAGGTGAGCCTGCCGATG
CTGGCAACAATGGCAGTGCCGCCGCCGGCGCCGCCGCCGCTGCCGGTGCG
GCGGCGCCCGGCGGCAGTGCTGGGGCTGCAGTGGCTTTGGTGAGCATTAA
CAGATACGATCGCCTCTGTCTTTAATTGAATCAGCATTGTTCTAGATAAA
GTGCAACTAACATGAAAGTTTGTGTAGGGTGGTGTGAGCGGAGCCCTTCT
GTCACTGACTACTGCAACTCGCTTCAAGCGCACCTATTATGAAATGGTGC
GCTACGTATCTATGCGCATGCTGACGGGATATGTAGGTGCGGACGTGCGA
TAGTGTACCATGCTGATCCTTCCATGCACCAAGAAGCACGATGAGATCTG
CACATGCACCGATGTGGTCATGGCAGTCGCATTTGCTGCTGCCACCGCAG
TCCATTGCATGCTAACCTCAAGGTCCCCTCAGTGATTATGGGAGTGGCAT
GTACAAATTGAGGCATTGCTTACAATAATATTCAAGTTCCCGCTTTTATG
TAACCCCTTCAGTGGCTGCGTCCCGCACTGTGCCAGTATTTAGTCCAGGA
TCCACATTAACGTTTGTCTGCAGTAATGTGTGCCTAGACCAACATGCATA
CACCTGCTGACAGCGCCTCGCGTGTTGGGTCACAATTGCACCAGAGTGGC
TGATGAGGGGCTTGTGGACATTACAATGATATTACGTTCATGTGTAACAA
GGCAGCCCTGAAAACTGCAGTTTGTGCACCGCAAAAGGTGCGGTGTCGCT
GCCTCAACATAGCTCCGGCAACATCAAGTCTTCAAGTGGTAGCAATGAAA
GACGTCAGCTACTTGCATGCCGGTGAGATTGCGCCGTTAAACAATGTCAT
GCCACAAGCTTTGAGACAACAAGGATGGCTCAAGCTCAGTCATTCGCCCT
CAAGAACCTCCAAGTGATCAAGTTTTGTCAGTAAATTCAGCTACCCATCG
GGCTTTGCTTGCAAATAGTGCTGTGTTGATGGCGCGATGCAGTGTGCGCT
TCCCCCCTGAATTTCATGGGGTAGAGCATCCACGCGGTGCTCTCATTTTC
TTACATCGCTTGTAGCTCGACGACATCACAAACACTTCGCAGTAGTGTCT
GAATGTGCGGTTCAACGATCGTGCCCCCGCGATGGCACGTGCTGCAAGTT
GGACAGGCACAGCTCACTGCGACGCACAAAAACCCCCTCTTGTCCCATCT
CCCTACTCCATGCAGGGCATTGGTGCAGGCAACAACAACCCTGCCCCTGC
CGCGGGCGTTGCTGGTCCCATACCTGCGGCACTGCCATTTGCTCCTCTGG
CAGCCGCAGCAATTGGCGGTGGCGGCGTCGCAGGCAGCTTCAACTTTGCA
CTGGGCGACCCCATGCACATGGAGTTGCAGCGCGCGGCGCACATTGACAG
AGACGCTGAGATACGCAGGCTGAAGCAGAGGTGCCAGGAACAGCTGGCAG
TGGCACAGCAGGCCAACGACATTGCGCAGTCGGAGAGGGCGGCAGCACAG
CAGGCGGCGCAGCTCGTCGCTGCGCACGTTGCGCGGTTCGCCGTTCTAGA
TCAGCGGGCTGACAGCGACAGAGCGCGCCTTGCGCAAGCCGATCGCGCAT
GTCAAGGCAGTGAACAGGCGCTGGCGCAGGCGCAGCTCACGGTGGCTGGC
CTGCTGGACAGTCACGTACGCGCCGAGAGAGCAGTGGCCGCCGGCTCGCA
GCTAGAGGTAAGCAGCAGCAGCGCTGCCAGTCATGGTGTGGATGGACGGG
TCACACTACGCCCATTGGCTGTTCAGTGGGTACAGTAAGCAGTGTCAGGT
GATGGTGCTGGCGAGAGCAGGGACCGGAGTGAAAGTTTTCTGCATGCGCG
GCACCACCAGCTCCAATTCGAGCACAGGACAAACTACAGTAGTGGGCAAG
TTGTTGTCGCAGCTGCAGTCAAGCAGGCCATGGAGCGCTGGTCGCTTTTG
CCAACTCCTGCTAGAGTTGGCATTGAGCTGTCACTGTTAGTCTGGCATCA
AATTCCTTACATGTGACAATTGTCATATTCTCATATCTGTTCACTACGCG
CATGTCTTGTTATTCTCATAGTTTTCCACTACATGCATGTCATATTCTCA
CATCTGTTTACTACATGCAGTCTTGTCAATCTCATATCTCTCCACTACAT
GCATGCCATATTCTCACATCTGTTCACTACATGCATGTCTCGTTAATCTC
ACATCTTTCCACTACATGCAAGTCTTGCTTGCAGGCTCAACGGCCGTCGG
GCGCGATCCTGCACAGCGCGGCTGCAGAGGCAGGCCCGCAAGCACTGGCC
GCCGCAGACGCGCACATGAATGGAGCCGTGGCAGGCGCTGTTGAGAGCTG
GGCGAGAGACCGTGATGCGCTCATATTAGCAGTGCAGCAGTTGCTGGCTG
TGAGTGACGCCCTGCGCGCCGAGGGCGAAGCCGGCCGGCGCGCCCTGGAG
CAGCAACGGGCTCATGAGGCCGCCGCCGCTAGAGCGTCAGACGAGGCTCA
GGCAGCCACCGATGCTGCCAGGCGCGCTCTCAAGCGCGCGCGCCAGCTGT
CTGCCAACAGGTGACATACTGTTGCGCAGATGGCAGCAGCTAGGCAACAC
TGGAAGCGGCAGTTGTGGCAGTAGCCTAGGCCGGGGAGTACGGTGGTGAC
GGAGGCGGCACGGGAAGGCGGCGGCGGAAGCGACGTAGCAGCAAAGGGAC
AAGAGTGGACGTAGCAGCGGTAGTGGCGGCAGCTGTTGTTCTTCATGCAC
AGCATCCTCGCTTCTCTTTGGTGCCTTAAGTGCGCTGGTAACACTGGAAG
CGGCAGTTGTGGC

Coding sequence (CDS) from alignment at Contig_21:1242507..1251069-

>mRNA_7231 ID=mRNA_7231|Name=jgi.p|Trimin1|348260|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1422bp|location=Sequence derived from alignment at Contig_21:1242507..1251069- (Tribonema minus UTEX_B_3156 )
ATGGGCTGCGGTTTCGCGATGCAGGTCCCAGGATCGCGAGTGCGCATAGT
GAAGCTGCGGCCGGACATGGCAACGGAGGCGCTCGCGCGGCTTATCGGAC
CTTTGGTGCAGCGTGATGATGCGCGGGTGACGATAAGCAGGGACCCTACC
GGCCGCCGCAAGAGCCAAGTGACCATCGAGTTCACTACGGCACAGGAGGC
CGTCGAAGCCGTACAGCAGCTGAGGGGCGTTGTCTTTGATGGAGCTCAAC
TGACAGTGTGGCGGCTGGATGCACGAGACCAACCCATGGACACCCCCCCT
GGCCCAAGTGCTGCCAACAACGGCAGTGGCGGCGACAACAGCGGCAGCGG
CAGCGGCAGCATGAGCGCTGCTGCTGCAAATGGTGCCTCTGCAGCGCAGA
GTGCGGGTGGCTCTGCATCAAGCACTACTGTCGCCGGCGGGCCTGCTGAT
GGCAGCGACAGCGGCGGCGACGGCGGCGGCAGCGGCGCCGGGTCCGACAA
TGACAGCGGCGGCGGCGACGCCGCCGTTGTCATTGTCGCCGCCGCTGCCG
CTGCTGTTCTACAGAGTGCGGGTGGCTCTGCGTCGAGCACCGCCGCACCT
CAAGGTGAGCCTGCCGATGCTGGCAACAATGGCAGTGCCGCCGCCGGCGC
CGCCGCCGCTGCCGGTGCGGCGGCGCCCGGCGGCAGTGCTGGGGCTGCAG
TGGCTTTGGGCATTGGTGCAGGCAACAACAACCCTGCCCCTGCCGCGGGC
GTTGCTGGTCCCATACCTGCGGCACTGCCATTTGCTCCTCTGGCAGCCGC
AGCAATTGGCGGTGGCGGCGTCGCAGGCAGCTTCAACTTTGCACTGGGCG
ACCCCATGCACATGGAGTTGCAGCGCGCGGCGCACATTGACAGAGACGCT
GAGATACGCAGGCTGAAGCAGAGGTGCCAGGAACAGCTGGCAGTGGCACA
GCAGGCCAACGACATTGCGCAGTCGGAGAGGGCGGCAGCACAGCAGGCGG
CGCAGCTCGTCGCTGCGCACGTTGCGCGGTTCGCCGTTCTAGATCAGCGG
GCTGACAGCGACAGAGCGCGCCTTGCGCAAGCCGATCGCGCATGTCAAGG
CAGTGAACAGGCGCTGGCGCAGGCGCAGCTCACGGTGGCTGGCCTGCTGG
ACAGTCACGTACGCGCCGAGAGAGCAGTGGCCGCCGGCTCGCAGCTAGAG
GGCGAAGCCGGCCGGCGCGCCCTGGAGCAGCAACGGGCTCATGAGGCCGC
CGCCGCTAGAGCGTCAGACGAGGCTCAGGCAGCCACCGATGCTGCCAGGC
GCGCTCTCAAGCGCGCGCGCCAGCTGTCTGCCAACAGGCCGGGGAGTACG
GTGGTGACGGAGGCGGCACGGGAAGGCGGCGGCGGAAGCGACGTAGCAGC
AAAGGGACAAGAGTGGACGTAG