mRNA_722 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|157152
Unique Name	mRNA_722
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|157152 vs. uniprot
Match: A0A835Z356_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z356_9STRA)

HSP 1 Score: 837 bits (2163), Expect = 1.190e-306
Identity = 421/421 (100.00%), Postives = 421/421 (100.00%), Query Frame = 1

Query:    1 PAKQAKSTRGKRGLLRTNRRKVLRGIPLLYEHAWLMDDDQFEEKRRNPCTPVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLRDALIADLNHEDSTCFIEAVGVDAGGRKVINSGSARVTSTTDHQSFKGSTVHTTSGDYKHQCLATAALKFATAKREQNLAYGGAISSYVKQGASLKIGVGTATYANLAYSNLRTLGRELLSRERREFAFARQRAKDRAIARLAREMGGADPEAAYKRHLHSGRVVEAGRVELQDRVKTMLDRKGVGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAVCVVVLTDEFRTTVRCCGCGEVLKQQDGSRIYGCPTVSDEDHCSIRFIDRDDNASVNIAMCGVNMLLGLPRPIHLQRERPPVAVDGVVEE 1263
            PAKQAKSTRGKRGLLRTNRRKVLRGIPLLYEHAWLMDDDQFEEKRRNPCTPVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLRDALIADLNHEDSTCFIEAVGVDAGGRKVINSGSARVTSTTDHQSFKGSTVHTTSGDYKHQCLATAALKFATAKREQNLAYGGAISSYVKQGASLKIGVGTATYANLAYSNLRTLGRELLSRERREFAFARQRAKDRAIARLAREMGGADPEAAYKRHLHSGRVVEAGRVELQDRVKTMLDRKGVGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAVCVVVLTDEFRTTVRCCGCGEVLKQQDGSRIYGCPTVSDEDHCSIRFIDRDDNASVNIAMCGVNMLLGLPRPIHLQRERPPVAVDGVVEE
Sbjct:    1 PAKQAKSTRGKRGLLRTNRRKVLRGIPLLYEHAWLMDDDQFEEKRRNPCTPVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLRDALIADLNHEDSTCFIEAVGVDAGGRKVINSGSARVTSTTDHQSFKGSTVHTTSGDYKHQCLATAALKFATAKREQNLAYGGAISSYVKQGASLKIGVGTATYANLAYSNLRTLGRELLSRERREFAFARQRAKDRAIARLAREMGGADPEAAYKRHLHSGRVVEAGRVELQDRVKTMLDRKGVGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAVCVVVLTDEFRTTVRCCGCGEVLKQQDGSRIYGCPTVSDEDHCSIRFIDRDDNASVNIAMCGVNMLLGLPRPIHLQRERPPVAVDGVVEE 421

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BLAST of jgi.p|Trimin1|157152 vs. uniprot
Match: A0A835Z611_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z611_9STRA)

HSP 1 Score: 793 bits (2047), Expect = 2.210e-284
Identity = 398/421 (94.54%), Postives = 408/421 (96.91%), Query Frame = 1

Query:    1 PAKQAKSTRGKRGLLRTNRRKVLRGIPLLYEHAWLMDDDQFEEKRRNPCTPVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLRDALIADLNHEDSTCFIEAVGVDAGGRKVINSGSARVTSTTDHQSFKGSTVHTTSGDYKHQCLATAALKFATAKREQNLAYGGAISSYVKQGASLKIGVGTATYANLAYSNLRTLGRELLSRERREFAFARQRAKDRAIARLAREMGGADPEAAYKRHLHSGRVVEAGRVELQDRVKTMLDRKGVGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAVCVVVLTDEFRTTVRCCGCGEVLKQQDGSRIYGCPTVSDEDHCSIRFIDRDDNASVNIAMCGVNMLLGLPRPIHLQRERPPVAVDGVVEE 1263
            PAKQ KSTRGKRG+LRTNRRKVLRGIPLLY+HAWLMDDD F+EKRRNP TPVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPL DALIADLN EDSTCFIEAVGVDAGGRKVINS SARVTSTTDHQSFKGSTVHTTSGDYKHQCLATAALKF TAKREQNLAYGGAISSYV+QGASLKIGVGTATYA+LAYSNLR L RELLSRERREFAFARQRAKDRAIAR+AREMGGADPEAAYKRHLHSG+VV A RVELQDRVKTMLDRKG GRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAA+CVVVLTDEFRTTVRCCGCGEVLKQQ+GSRIYGCPTV DEDHCSIRFIDRDDNASVNIAMCGV+MLLGLPRPIHLQRERPPVAVDGVVEE
Sbjct:  289 PAKQPKSTRGKRGVLRTNRRKVLRGIPLLYDHAWLMDDDHFKEKRRNPSTPVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLSDALIADLNREDSTCFIEAVGVDAGGRKVINSASARVTSTTDHQSFKGSTVHTTSGDYKHQCLATAALKFETAKREQNLAYGGAISSYVEQGASLKIGVGTATYADLAYSNLRALARELLSRERREFAFARQRAKDRAIARMAREMGGADPEAAYKRHLHSGKVVGAARVELQDRVKTMLDRKGEGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAICVVVLTDEFRTTVRCCGCGEVLKQQNGSRIYGCPTVLDEDHCSIRFIDRDDNASVNIAMCGVHMLLGLPRPIHLQRERPPVAVDGVVEE 709

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BLAST of jgi.p|Trimin1|157152 vs. uniprot
Match: A0A836CCX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCX3_9STRA)

HSP 1 Score: 286 bits (732), Expect = 4.950e-86
Identity = 177/414 (42.75%), Postives = 234/414 (56.52%), Query Frame = 1

Query:   25 RGKRGLLRTNRRKVLRGIPLLYEHAWLMDDDQFEEKRRNPCTPVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLRDALIADLNHEDSTCFIEAVGVDAGGRKVINSGSARVTSTTDHQSFKGSTVHTTSGDYKHQCLATAALKFATAKREQNLAYGGAISSYVKQGASLKIGVGTATYANLAYSNLRTLGRELLSRERREFAFARQRAKDRAIARLAREMGGADPEAAY----KRHLHSGRV-VEAGRVELQDRVKTMLDRKGVGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAVCVVVLTDEFRTTVRCCGCGEVLKQQDGSRIYGCPTVSDED-----HCSIRFIDRDDNASVNIAMCGVNMLLGLPRPIHLQRERPP 1236
            R +R ++        RG+ +L    W++DD  +E  +     P P +V  I SDG R H TL TL A    G  +LV++GYD I  T V G   RG+F+D APL + L+  L+  D  CF+EA+GVD G +++I     RVT  T+    KGS    +  +Y++Q LA  A +F   +RE N  Y  A+ SY +  AS +   G   ++   Y  L  +  E LS +RR FAFAR RA DRA+A LAR++ G DP+AA     +R    G+  V   R EL  +V+  L   G GRTWTRVVFFGN QFG G+AGPLPRK LL  L+ +C VVLTDE+ T+  C  CG  L Q  GSR++ C + +DED      CS+R++DRD     NIAM GV  L G  RP HL R  PP
Sbjct:  306 RARRAVIXXXXXXXRRGLRILRREGWVLDDSAYEAAKGGRRPP-PHLVRCITSDGERCHVTLQTLVAARPAGAAELVREGYDAIRGTCVVGRDRRGLFRDVAPLPEELLDCLDAGDHACFVEAIGVDPGQKQLITHVRTRVTRRTEAADLKGSDRCISGREYRYQNLALRAQRFERERREANAPYRLALESYARDEASARCPRGMELFSRTVYQGLDAVAGEHLSAQRRRFAFARARATDRALAHLARDIAGGDPDAAAERAERRRSAPGKAPVSPRRRELLAKVQERL-AGGRGRTWTRVVFFGNGQFGSGAAGPLPRKALLKKLSEICCVVLTDEYLTSKTCPCCGGRLAQVAGSRVFRCSSTTDEDSGAGGRCSVRYLDRDCAGGGNIAMIGVRRLQGRGRPAHLAR--PP 715

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BLAST of jgi.p|Trimin1|157152 vs. uniprot
Match: A0A835Z394_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z394_9STRA)

HSP 1 Score: 287 bits (735), Expect = 1.030e-85
Identity = 173/389 (44.47%), Postives = 234/389 (60.15%), Query Frame = 1

Query:   73 GIPLLYEHAWLMDDDQFEEKRRNPCTPVPFVVNNIKSDGVRVHTTLVTLGAEGA-PGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLRDALIADLNHEDSTCFIEAVGVDAGGRKVINSGSARVTSTTDHQSFKG-STVHTTSGDYKHQCLATAALKFATAKREQNLAYGGAISSYVKQGASLKIGVGTATYANLAYSNLRTLGRELLSRERREFAFARQRAKDRAIARLAREMGGADPEAAYKRHLHSGRVVEAGRVELQDRVKTMLDRKGVGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAVCVVVLTDEFRTTVRCCGCGEVLKQQDGSRIYGCPTVSDED---HCSIRFIDRDDNASVNIAMCGVNMLLGLPRPIHLQR 1224
            GI  L+   W ++DD  +   + P    P+ VNNI +DG++V+ TL T   +   PG   LVKKGY +I E +    HTRG+F  AA +   L++ +N +D  CF+E VGVD G + +  + +ARVTS +  + FK   T   ++ D++   L+ A   F   +R  N++Y  AI+     G S++   GTA YAN  ++N + +  E LS  RR  +F  +RAK R IAR+ARE+GG   EAA  R +  G   E  R  L  R++  L   G  RTWTRV FFGNAQFGHGS GPLPRK L+  +A +  VVL DEFRT++ CCGCG  L Q D SR+Y C + + E    +CS+RFIDRD NASVNI MCG+ MLLG+ RP+HL R
Sbjct:  432 GIRCLWGTGWTIEDDLSKHGNKKP----PWFVNNITTDGLQVNVTLATKVVDPVIPGVADLVKKGYTSIKEVYDPAIHTRGLFGSAAKMSGELLSAVNEKDPRCFVEIVGVDPGQKLLYKAAAARVTSNSSAEDFKNIETASRSASDHRFLSLSKAYTNFDKERRRDNMSYRTAIAEL--SGVSMRTPGGTAAYANTLHTNFKAMTEEKLSWGRRCKSFDAKRAKMREIARMAREIGGKSSEAAALRKV--GPESEE-RAALLSRMRDRL--AGNHRTWTRVAFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSMTCCGCGMNLVQVDSSRVYQCASCTPESVNQNCSVRFIDRDVNASVNIGMCGIRMLLGMSRPLHLCR 809

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BLAST of jgi.p|Trimin1|157152 vs. uniprot
Match: A0A835YYX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYX5_9STRA)

HSP 1 Score: 275 bits (702), Expect = 3.010e-81
Identity = 169/390 (43.33%), Postives = 233/390 (59.74%), Query Frame = 1

Query:   73 GIPLLYEHAWLMDDDQFEEKRRNPCTPVPFVVNNIKSDGVRVHTTLVTLGAEGA-PGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLRDALIADLNHEDSTCFIEAVGVDAGGRKVINSGSARVTSTTDHQSFKG-STVHTTSGDYKHQCLATAALKFATAKREQNLAYGGAISSYVKQGASLKIGVGTATYANLAYSNLRTLGRELLSRERREFAFARQRAKDRAIARLAREMGGADPEAAYKRHLH-SGRVVEAGRVELQDRVKTMLDRKGVGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAVCVVVLTDEFRTTVRCCGCGEVLKQQDGSRIYGCPTVSDEDH---CSIRFIDRDDNASVNIAMCGVNMLLGLPRPIHLQR 1224
            G+  L+   W   +D  E   + P    P+ VNNI +DG++V+ TL T   E   PG  +L++KGY +I + + A  HTRG+F  AA + D LI+ LN +D  CFIEAVGVD+G + +  + +AR++S T  + FK       ++ D+K   LA A   F   +R  N AY  AIS   +   S++   GTA Y +  +S+  TL  E LS +RR  +F  +RAK R I+R+A ++ G   EA+  R +    +  EA    ++D +       G  RTWTRVVFFGNA FGHGS GPLPRK L+  +A +  VVL DEFRT+  CCGCG+ L Q +GSR++ C + + E     CS+RFIDRD NASVNIA+CG+NMLLG+ RP HL R
Sbjct:  390 GLRCLWGQEWTFTEDLSEYGHKAP----PWFVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSAEDFKKIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLSE--VSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIAGRSAEASALRKIGPEPKEREALLTSMRDNLA------GDRRTWTRVVFFGNALFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDVNASVNIAICGINMLLGMARPPHLCR 767

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BLAST of jgi.p|Trimin1|157152 vs. uniprot
Match: A0A835YYB9_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB9_9STRA)

HSP 1 Score: 274 bits (701), Expect = 4.620e-81
Identity = 171/389 (43.96%), Postives = 231/389 (59.38%), Query Frame = 1

Query:   73 GIPLLYEHAWLMDDDQFEEKRRNPCTPVPFVVNNIKSDGVRVHTTLVTLGAEGA-PGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLRDALIADLNHEDSTCFIEAVGVDAGGRKVINSGSARVTSTTDHQSFKG-STVHTTSGDYKHQCLATAALKFATAKREQNLAYGGAISSYVKQGASLKIGVGTATYANLAYSNLRTLGRELLSRERREFAFARQRAKDRAIARLAREMGGADPEAAYKRHLHSGRVVEAGRVELQDRVKTMLDRKGVGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAVCVVVLTDEFRTTVRCCGCGEVLKQQDGSRIYGCPTVSDEDH---CSIRFIDRDDNASVNIAMCGVNMLLGLPRPIHLQR 1224
            GI  L+   W ++ D  E   + P    P+ VNNI +DG++V+ TL T       PG  +L++KGY +I + + A  HTRG+F  A  + D +I+ LN +D  CFIEAVGVD+G + +  + +ARV+S T  + FK       ++ D+K   L+ A  KF   +R  N  Y  AIS       S++   G A Y N+ +S+   +  E LS ERR  +F  +RAK R I+R+A ++ G   EAA  R +  G   E  R  L  R++  L   G  RTWTRVVFFGNAQFGHGS GPLPRK L+  +A +  VVL DEFRT+  CCGCG+ L Q +GSR++ C + + E     CS+RFIDRD NASVNIA+CG+NMLLG  RP HL R
Sbjct:  395 GIRCLWGQKWTIEGDLSEYGHKAP----PWFVNNITTDGLQVNVTLATKRVTAVIPGVAELIEKGYASIKDVYKADTHTRGLFGSAEKMSDQVISALNKKDRRCFIEAVGVDSGQKLLYTAAAARVSSDTSPEDFKKIQPAFRSASDHKFLSLSKAWRKFEGERRRDNTGYSDAISQL--SSVSMRTPGGAAAYTNMLHSHFIVMADEKLSWERRRKSFDAKRAKMREISRMAVQIAGRSAEAAALRKI--GPEPEE-REALLTRMRDNL--AGDRRTWTRVVFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDINASVNIAICGINMLLGRTRPPHLCR 772

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BLAST of jgi.p|Trimin1|157152 vs. uniprot
Match: A0A835ZC03_9STRA (OrfB_Zn_ribbon domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC03_9STRA)

HSP 1 Score: 217 bits (553), Expect = 1.770e-62
Identity = 146/393 (37.15%), Postives = 203/393 (51.65%), Query Frame = 1

Query:   73 GIPLLYEHAWLMDDDQFEEKRRNPCTPVPFVVNNIKSDGVRVHTTLVTLGAEGA-PGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLRDALIADLNHEDSTCFIEAVGVDAGGRKVINSGSARVTSTTDHQSFKG-STVHTTSGDYKHQCLATAALKFATAKREQNLAYGGAISSYVKQGASLKIGVGTATYANLAYSNLRTLGRELLSRERREFAFARQR----AKDRAIARLAREMGGADPEAAYKRHLHSGRVVEAGRVELQDRVKTMLDRKGVGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAVCVVVLTDEFRTTVRCCGCGEVLKQQDGSRIYGCPTVSDEDH---CSIRFIDRDDNASVNIAMCGVNMLLGLPRPIHLQR 1224
            GI  L+   W ++ D  E   + P    P++VNNI +DG++V+ TL T   E   PG  +L++KGY +I + + A  HTRG+F  A  + D +I+ LN +D  CFIEAVGVD+G + +  + +AR++S T  ++FK       ++ D+K   L+ A  KF                                             G   L  E ++F           +D   A   R++G   PE   +         EA    ++D +       G  RTWTRVVFFGNAQFGHGS GPLPRK L+  +A +  VVL +EFRT+  CCGCG+ L Q +GSR++ C + + E     CS+RFIDRD NASVNIA+CG+NMLLG  RP HL R
Sbjct:  114 GIRSLWGQRWTIEGDLREYGHKAP----PWLVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSINDVYKADTHTRGLFGSAEKMSDQVISALNKKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSSENFKKIQPAFRSASDHKFLSLSKAWRKFE--------------------------------------------GEAFLGEETQKFRCQEGEDAGDIEDGGTAAALRKIG---PEPEER---------EALLTRMRDNLA------GDRRTWTRVVFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMNEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDINASVNIAICGINMLLGRTRPQHLCR 440

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BLAST of jgi.p|Trimin1|157152 vs. uniprot
Match: A0A835ZC24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC24_9STRA)

HSP 1 Score: 219 bits (557), Expect = 1.440e-59
Identity = 146/387 (37.73%), Postives = 197/387 (50.90%), Query Frame = 1

Query:   25 RGKRGLLRTNRRKVLRGIPLLYEHAWLMDDDQFEEKRRNPCTPVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLRDALIADLNHEDSTCFIEAVGVDAGGRKVINSGSARVTSTTDHQSFKGSTVHTTSGDYKHQCLATAALKFATAKREQNLAYGGAISSYVKQGASLKIGVGTATYANLAYSNLRTLGRELLSRERREFAFARQRAKDRAIARLAREMGGADPEAAY-----KRHLHSGRVVEAGRVELQDRVKTMLDRKGVGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAVCVVVLTDEFRTTVRCCGCGEVLKQQDGSRIYGCPTVSDEDHCSIRFIDRDDNASVNIA 1170
            R +R +++T R+    G+ +L    W++DD  +E  +     P P +V  I SDG R H TL TL A    G  +LV++GYD I  T V G   RG+F+D APL + L+  L+  D  CF+EA+G                         KGS    +  +Y++Q LA  A +F   +RE N  Y  A+ +Y +  AS +   G   ++   Y  L  +  E LS +RR FAFAR RA DRA+A LAR++ G DP+AA      +R       V   R EL   V+  L   G GRTWTR+VFFGN QFG G+AG LPRK LL  LA +C VVLTDE+ T+          K  + S   G         CS+R++DRD     NIA
Sbjct:  497 RARRAVIKTGRKVRRSGLRILRREGWVLDDAAYEAAKGGRRPP-PHLVRCITSDGERCHVTLQTLVAARPAGAPELVREGYDAIRGTCVVGRDRRGLFRDVAPLPEELLDCLDAGDRACFVEAIGA---------------------ADLKGSDRCISGREYRYQSLALRAQRFERERREANAPYRLALENYARDEASARCPGGMELFSRTVYQGLDAVAGEQLSAQRRRFAFARARATDRALAHLARDIAGGDPDAAASRAERRRSAPGKSPVSPRRRELLANVRERL-AGGRGRTWTRIVFFGNGQFGSGAAGRLPRKALLKTLAEICCVVLTDEYLTS----------KTYEDSGAGG--------RCSVRYLDRDCAGGGNIA 842

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BLAST of jgi.p|Trimin1|157152 vs. uniprot
Match: A0A835ZIE4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIE4_9STRA)

HSP 1 Score: 190 bits (482), Expect = 4.640e-50
Identity = 113/294 (38.44%), Postives = 169/294 (57.48%), Query Frame = 1

Query:    1 PAKQAKSTRGKRGLLRTNRRKVLRGIPLLYEHAWLMDDDQFEEKRRNPCTPVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLRDALIADLNHEDSTCFIEAVGVDAGGRKVINSGSARVTSTTDHQSFKGSTVHTTSGDYKHQCLATAALKFATAKREQNLAYGGAISSYVKQGASLKIGVGTATYANLAYSNLRTLGRELLSRERREFAFARQRAKDRAIARLAREMGGADPEAAYKRHLHSGRVVEAGRVELQDRVKTMLDR 882
            P +  K  R KR +L+T +R+   GI  L+  AW++DD+++E ++  P    P +V +I +DGV  + TLVTL A GAPG   L K GYD+I       EH RG+FKD  PL   L+  L+ ED++CF+EAVG D GG+ +      RVTS +  +  +G+    TS +Y++  LA  A +F   +R  N  YG A+ +Y +  ASLK+           Y+N+  +  E LS ERR F FA+ RA+DRA+A +AR++ G DP+AA  R L+  +  +  + E+  + K +L R
Sbjct:  433 PGQPRKRARAKRAVLKTKKRRRRFGIRQLWREAWVLDDEEYERRKGGPA---PQLVRSITTDGVHCNVTLVTLDA-GAPGVAGLAKAGYDHIAPMADVTEHWRGVFKDIKPLSQELMDVLDEEDASCFVEAVGADPGGKVMCTHTRTRVTSHSVPEDLRGTDRMFTSSEYRYASLAKRAQRFEDERRRDNPGYGAAVGAYSQHNASLKV----------LYANISVVAAEKLSDERRHFRFAQFRARDRALAAVARDLAGGDPDAALARVLNPEKRAKMKKKEISQQRKELLAR 712

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BLAST of jgi.p|Trimin1|157152 vs. uniprot
Match: A0A836CFJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFJ9_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.270e-42
Identity = 118/291 (40.55%), Postives = 160/291 (54.98%), Query Frame = 1

Query:   73 GIPLLYEHAWLMDDDQFEEKRRNPCTPVPFVVNNIKSDGVRVHTTLVTLGAEGA-PGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLRDALIADLNHEDSTCFIEAVGVDAGGRKVINSGSARVTSTTDHQSFKG-STVHTTSGDYKHQCLATAALKFATAKREQNLAYGGAISSYVKQGASLKIGVGTATYANLAYSNLRTLGRELLSRERREFAFARQRAKDRAIARLAREMGGADPEAAYKRHLHSGRVVEAGRVELQDRVKTMLDRKGVGRTWTRVVFFGNAQFG 939
            GI  L+   W +++D  E   R P    P+ VNNI +DG++V+ TL T   E   PG  +L++KGY +I + + A  HTRG+F  AA + D LI+ LN +D  CFIEA GVDAG   +  + +AR++S T  + FK       ++ D+K   L+ A  KF   +R  N  Y  AIS     G S++   G A Y N  +S+  T+  E LS ERR  +F   RAK R I+R+A ++ G   EAA  R    G   E  R  L  R++  L   G  RTWTRVVFFGNAQFG
Sbjct:  532 GIRCLWGQQWTIEEDLSEHADRGP----PWFVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSIKDVYKADTHTRGLFGSAAKISDQLISALNAKDRRCFIEATGVDAGQILLYTAAAARISSDTSPEDFKKIQPAFRSASDHKFLSLSKAWRKFEGERRRDNTGYSDAISQL--SGVSMRTPGGAAAYTNTLHSHFITMAEEKLSWERRRKSFDANRAKMRDISRMAVQIAGRSAEAAALRKF--GPEPEE-REALLTRMRDNL--AGDRRTWTRVVFFGNAQFG 811

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|157152 vs. uniprot

BLAST of jgi.p|Trimin1|157152 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19


Match Name	E-value	Identity	Description
A0A835Z356_9STRA	1.190e-306	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z611_9STRA	2.210e-284	94.54	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CCX3_9STRA	4.950e-86	42.75	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z394_9STRA	1.030e-85	44.47	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YYX5_9STRA	3.010e-81	43.33	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YYB9_9STRA	4.620e-81	43.96	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835ZC03_9STRA	1.770e-62	37.15	OrfB_Zn_ribbon domain-containing protein n=1 Tax=T...	[more]
A0A835ZC24_9STRA	1.440e-59	37.73	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZIE4_9STRA	4.640e-50	38.44	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CFJ9_9STRA	1.270e-42	40.55	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_2	contig	Contig_2:1219254..1220519 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|157152\|e_gw1.2.338.1
Hectar predicted targeting category	other localisation
TranscriptId	157474
Track	FilteredModels1
ProteinId	157152

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|157152	gene_722	Tribonema minus UTEX_B_3156	gene	Contig_2 1219254..1220519 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_722_1	exon_722_1	Tribonema minus UTEX_B_3156	exon	Contig_2 1219254..1220519 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_722	CDS_722	Tribonema minus UTEX_B_3156	CDS	Contig_2 1219254..1220519 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|157152	Trimin1\|157152\|e_gw1.2.338.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_2 1219254..1220519 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_2:1219254..1220519-
coding sequence from alignment at Contig_2:1219254..1220519-

spliced messenger RNA

>mRNA_722 ID=mRNA_722|Name=jgi.p|Trimin1|157152|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1266bp|location=Sequence derived from alignment at Contig_2:1219254..1220519- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CCCGCAAAGCAAGCCAAATCAACTCGCGGAAAGAGAGGGCTGCTGCGGAC
CAATCGCAGGAAGGTTTTGCGTGGCATTCCGCTGCTCTATGAGCACGCGT
GGCTTATGGACGACGATCAATTCGAAGAGAAGCGACGCAATCCCTGTACA
CCCGTCCCGTTTGTCGTCAACAACATCAAAAGCGATGGCGTACGGGTGCA
CACGACCCTGGTCACGCTCGGAGCTGAAGGAGCGCCTGGACGAGACCAGC
TCGTCAAGAAGGGATACGACAACATCACAGAGACCTTCGTCGCAGGCGAG
CACACACGTGGCATCTTCAAGGATGCTGCGCCTCTCAGGGATGCGCTCAT
CGCGGACCTCAATCACGAGGACTCGACATGCTTCATCGAGGCGGTCGGAG
TTGACGCAGGAGGTCGCAAAGTGATCAACTCAGGTTCGGCGCGAGTGACC
TCCACGACAGATCATCAGAGCTTCAAGGGGAGTACCGTGCATACAACCTC
AGGCGACTACAAGCACCAGTGTCTGGCAACAGCAGCGCTGAAATTTGCGA
CGGCCAAGCGGGAGCAGAACCTGGCATACGGCGGGGCCATCAGCAGCTAC
GTCAAGCAGGGTGCCAGTCTCAAGATCGGCGTCGGAACCGCCACATATGC
CAACCTTGCGTACAGCAACCTGCGCACGTTGGGTAGAGAGCTGCTTTCAC
GCGAAAGGAGGGAGTTTGCGTTCGCGAGGCAGCGTGCGAAGGACCGGGCG
ATTGCGAGATTGGCGAGGGAGATGGGAGGCGCCGATCCGGAGGCGGCGTA
CAAGAGGCACCTTCACAGTGGCAGGGTTGTGGAGGCGGGGCGGGTGGAGC
TGCAAGACAGAGTAAAGACGATGTTAGATCGCAAGGGGGTGGGGAGAACT
TGGACTAGAGTAGTGTTTTTCGGGAATGCGCAGTTCGGCCACGGCAGTGC
CGGCCCGCTTCCCCGTAAGCGCCTTCTCTGGGTGCTTGCAGCAGTTTGTG
TGGTAGTGTTGACCGATGAGTTCAGAACTACGGTTAGATGCTGCGGCTGT
GGGGAGGTATTGAAACAGCAGGACGGATCTCGGATCTACGGTTGCCCTAC
CGTGTCAGACGAGGACCACTGCTCGATCAGATTCATCGACCGCGACGACA
ACGCTTCCGTGAACATCGCCATGTGCGGTGTGAACATGCTGCTGGGGCTA
CCGCGCCCTATCCACTTGCAGCGCGAGAGGCCTCCCGTCGCAGTCGATGG
TGTGGTTGAGGAGTGA

protein sequence of jgi.p|Trimin1|157152

>Trimin1|157152|e_gw1.2.338.1 ID=Trimin1|157152|e_gw1.2.338.1|Name=jgi.p|Trimin1|157152|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=422bp
PAKQAKSTRGKRGLLRTNRRKVLRGIPLLYEHAWLMDDDQFEEKRRNPCT
PVPFVVNNIKSDGVRVHTTLVTLGAEGAPGRDQLVKKGYDNITETFVAGE
HTRGIFKDAAPLRDALIADLNHEDSTCFIEAVGVDAGGRKVINSGSARVT
STTDHQSFKGSTVHTTSGDYKHQCLATAALKFATAKREQNLAYGGAISSY
VKQGASLKIGVGTATYANLAYSNLRTLGRELLSRERREFAFARQRAKDRA
IARLAREMGGADPEAAYKRHLHSGRVVEAGRVELQDRVKTMLDRKGVGRT
WTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAVCVVVLTDEFRTTVRCCGC
GEVLKQQDGSRIYGCPTVSDEDHCSIRFIDRDDNASVNIAMCGVNMLLGL
PRPIHLQRERPPVAVDGVVEE*

mRNA from alignment at Contig_2:1219254..1220519-

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_722 ID=mRNA_722|Name=jgi.p|Trimin1|157152|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1266bp|location=Sequence derived from alignment at Contig_2:1219254..1220519- (Tribonema minus UTEX_B_3156 )
CCCGCAAAGCAAGCCAAATCAACTCGCGGAAAGAGAGGGCTGCTGCGGAC
CAATCGCAGGAAGGTTTTGCGTGGCATTCCGCTGCTCTATGAGCACGCGT
GGCTTATGGACGACGATCAATTCGAAGAGAAGCGACGCAATCCCTGTACA
CCCGTCCCGTTTGTCGTCAACAACATCAAAAGCGATGGCGTACGGGTGCA
CACGACCCTGGTCACGCTCGGAGCTGAAGGAGCGCCTGGACGAGACCAGC
TCGTCAAGAAGGGATACGACAACATCACAGAGACCTTCGTCGCAGGCGAG
CACACACGTGGCATCTTCAAGGATGCTGCGCCTCTCAGGGATGCGCTCAT
CGCGGACCTCAATCACGAGGACTCGACATGCTTCATCGAGGCGGTCGGAG
TTGACGCAGGAGGTCGCAAAGTGATCAACTCAGGTTCGGCGCGAGTGACC
TCCACGACAGATCATCAGAGCTTCAAGGGGAGTACCGTGCATACAACCTC
AGGCGACTACAAGCACCAGTGTCTGGCAACAGCAGCGCTGAAATTTGCGA
CGGCCAAGCGGGAGCAGAACCTGGCATACGGCGGGGCCATCAGCAGCTAC
GTCAAGCAGGGTGCCAGTCTCAAGATCGGCGTCGGAACCGCCACATATGC
CAACCTTGCGTACAGCAACCTGCGCACGTTGGGTAGAGAGCTGCTTTCAC
GCGAAAGGAGGGAGTTTGCGTTCGCGAGGCAGCGTGCGAAGGACCGGGCG
ATTGCGAGATTGGCGAGGGAGATGGGAGGCGCCGATCCGGAGGCGGCGTA
CAAGAGGCACCTTCACAGTGGCAGGGTTGTGGAGGCGGGGCGGGTGGAGC
TGCAAGACAGAGTAAAGACGATGTTAGATCGCAAGGGGGTGGGGAGAACT
TGGACTAGAGTAGTGTTTTTCGGGAATGCGCAGTTCGGCCACGGCAGTGC
CGGCCCGCTTCCCCGTAAGCGCCTTCTCTGGGTGCTTGCAGCAGTTTGTG
TGGTAGTGTTGACCGATGAGTTCAGAACTACGGTTAGATGCTGCGGCTGT
GGGGAGGTATTGAAACAGCAGGACGGATCTCGGATCTACGGTTGCCCTAC
CGTGTCAGACGAGGACCACTGCTCGATCAGATTCATCGACCGCGACGACA
ACGCTTCCGTGAACATCGCCATGTGCGGTGTGAACATGCTGCTGGGGCTA
CCGCGCCCTATCCACTTGCAGCGCGAGAGGCCTCCCGTCGCAGTCGATGG
TGTGGTTGAGGAGTGA

Coding sequence (CDS) from alignment at Contig_2:1219254..1220519-

>mRNA_722 ID=mRNA_722|Name=jgi.p|Trimin1|157152|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1266bp|location=Sequence derived from alignment at Contig_2:1219254..1220519- (Tribonema minus UTEX_B_3156 )
CCCGCAAAGCAAGCCAAATCAACTCGCGGAAAGAGAGGGCTGCTGCGGAC
CAATCGCAGGAAGGTTTTGCGTGGCATTCCGCTGCTCTATGAGCACGCGT
GGCTTATGGACGACGATCAATTCGAAGAGAAGCGACGCAATCCCTGTACA
CCCGTCCCGTTTGTCGTCAACAACATCAAAAGCGATGGCGTACGGGTGCA
CACGACCCTGGTCACGCTCGGAGCTGAAGGAGCGCCTGGACGAGACCAGC
TCGTCAAGAAGGGATACGACAACATCACAGAGACCTTCGTCGCAGGCGAG
CACACACGTGGCATCTTCAAGGATGCTGCGCCTCTCAGGGATGCGCTCAT
CGCGGACCTCAATCACGAGGACTCGACATGCTTCATCGAGGCGGTCGGAG
TTGACGCAGGAGGTCGCAAAGTGATCAACTCAGGTTCGGCGCGAGTGACC
TCCACGACAGATCATCAGAGCTTCAAGGGGAGTACCGTGCATACAACCTC
AGGCGACTACAAGCACCAGTGTCTGGCAACAGCAGCGCTGAAATTTGCGA
CGGCCAAGCGGGAGCAGAACCTGGCATACGGCGGGGCCATCAGCAGCTAC
GTCAAGCAGGGTGCCAGTCTCAAGATCGGCGTCGGAACCGCCACATATGC
CAACCTTGCGTACAGCAACCTGCGCACGTTGGGTAGAGAGCTGCTTTCAC
GCGAAAGGAGGGAGTTTGCGTTCGCGAGGCAGCGTGCGAAGGACCGGGCG
ATTGCGAGATTGGCGAGGGAGATGGGAGGCGCCGATCCGGAGGCGGCGTA
CAAGAGGCACCTTCACAGTGGCAGGGTTGTGGAGGCGGGGCGGGTGGAGC
TGCAAGACAGAGTAAAGACGATGTTAGATCGCAAGGGGGTGGGGAGAACT
TGGACTAGAGTAGTGTTTTTCGGGAATGCGCAGTTCGGCCACGGCAGTGC
CGGCCCGCTTCCCCGTAAGCGCCTTCTCTGGGTGCTTGCAGCAGTTTGTG
TGGTAGTGTTGACCGATGAGTTCAGAACTACGGTTAGATGCTGCGGCTGT
GGGGAGGTATTGAAACAGCAGGACGGATCTCGGATCTACGGTTGCCCTAC
CGTGTCAGACGAGGACCACTGCTCGATCAGATTCATCGACCGCGACGACA
ACGCTTCCGTGAACATCGCCATGTGCGGTGTGAACATGCTGCTGGGGCTA
CCGCGCCCTATCCACTTGCAGCGCGAGAGGCCTCCCGTCGCAGTCGATGG
TGTGGTTGAGGAGTGA