mRNA_7152 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|152612 vs. uniprot
Match: A0A835Z8Z0_9STRA (Guanylate cyclase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Z0_9STRA) HSP 1 Score: 394 bits (1012), Expect = 1.600e-138 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1
Query: 1 FDCALLFVDISGFTSSMERFATQGSRGTERFWRAISGYFGSLLREIYSRGGDVECFAGDAMMVSFGAEEVASHPIGALILARHLALHGDVQSEADARLAVATKVAVDAAAAMLRTMSPYTRVERDFPGPGQDMQLLLTLHGSVGAGGLTALELIHADTGETARGKRWHYVCGPVIGQLARAHAISAANDCVLSKQAARAAGADA 612
FDCALLFVDISGFTSSMERFATQGSRGTERFWRAISGYFGSLLREIYSRGGDVECFAGDAMMVSFGAEEVASHPIGALILARHLALHGDVQSEADARLAVATKVAVDAAAAMLRTMSPYTRVERDFPGPGQDMQLLLTLHGSVGAGGLTALELIHADTGETARGKRWHYVCGPVIGQLARAHAISAANDCVLSKQAARAAGADA
Sbjct: 1 FDCALLFVDISGFTSSMERFATQGSRGTERFWRAISGYFGSLLREIYSRGGDVECFAGDAMMVSFGAEEVASHPIGALILARHLALHGDVQSEADARLAVATKVAVDAAAAMLRTMSPYTRVERDFPGPGQDMQLLLTLHGSVGAGGLTALELIHADTGETARGKRWHYVCGPVIGQLARAHAISAANDCVLSKQAARAAGADA 204
BLAST of jgi.p|Trimin1|152612 vs. uniprot
Match: D8LQF9_ECTSI (Guanylyl cyclase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQF9_ECTSI) HSP 1 Score: 109 bits (273), Expect = 2.770e-25 Identity = 76/203 (37.44%), Postives = 108/203 (53.20%), Query Frame = 1
Query: 4 DCALLFVDISGFTSSMERFATQGSRGTERFWRAISGYFGSLLREIYSRGGDVECFAGDAMMVSFGAEEVASHPIGALILARHLALHGDVQSEADARLAVATKVAVDAAAAMLRTMSPYTRVERDFPGPGQDMQLLLTLHGSVGAGGLTALELIHADTGETARGKRWHYVCGPVIGQLARAHAISAANDCVLSKQAARAAGADA 612
D ALLFVDISG+T+SME FA QG++G E+FW+ + YF LL I GGD++CFAGDA+++ + E + G + L G + +L +AT A +L +SPY + G + LTLHGS+G G L + + T A +VCG V QLA AH +S N+ LS +A+ +A +A
Sbjct: 2 DAALLFVDISGYTASMEMFAQQGAQGIEKFWKMFNAYFCDLLDIIQGTGGDIDCFAGDAILIVYETERIWKRT-GESVRKCINTLDGTQPT----KLCLATMAAAQCGGRLLNKLSPYNFSD----GVNEST---LTLHGSIGVGSLRTVNI--GGTTAQAGSSFATFVCGGVFEQLAIAHDLSRKNEVCLSGEASTSAAEEA 190
BLAST of jgi.p|Trimin1|152612 vs. uniprot
Match: A0A835YYD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYD2_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 4.700e-17 Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 25 DISGFTSSMERFATQGSRGTERFWRAISGYFGSLLREIYSRGGDVECFAGDAMMVSFGAEEVASHPI 225
D+SGFT+ MERFA+ G G E+FW I+GYF LL I GGDVECFAGDA+MV + A+ +A +
Sbjct: 2 DVSGFTACMERFASHGPAGIEKFWTIINGYFNELLSYIRGTGGDVECFAGDALMVVYDAKGIARRQV 68
BLAST of jgi.p|Trimin1|152612 vs. uniprot
Match: A0A061QVT6_9CHLO (Guanylyl cyclase n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QVT6_9CHLO) HSP 1 Score: 65.1 bits (157), Expect = 8.640e-9 Identity = 55/193 (28.50%), Postives = 97/193 (50.26%), Query Frame = 1
Query: 16 LFVDISGFTSSMERFATQGSRGTERFWRAISGYFGSLLREIYSRGGDVECFAGDAMMVSFGAEEVASHP--IGALILARHLALHGDVQSEADARLAVATKVAVDAAAAMLRTMSPYTRVERDFPGPGQDMQLLLTLHGSVGAGGLTALELIHADTGETARGKRWHYVCGPVIGQLARAHAISAANDCVLSKQA 588
L +D+SGFT+ E+F+ G++ E F +SG+F I+S GGD++CFAGDA+++ F + +A H + L+L R S ++ L A+ A A+ R ++ Y PG LT+H ++ G + ++E + RG+ +V G + +L +A +S +++ VL+ A
Sbjct: 68 LLLDVSGFTALSEKFSEGGTKSFEEFSLLLSGFFARTCEIIFSYGGDIDCFAGDALLILFPST-IAVHKKRLDKLLLPRDSRNSSGGASVLNSNLIEPATRALQCAFAVSRELNEYE------VSPGLPR---LTIHAAMACGDIYSVE---CGGSQARRGEA--FVLGRPLCELRKAVDLSRSSEIVLTAMA 245
BLAST of jgi.p|Trimin1|152612 vs. uniprot
Match: A0A7S4HKQ7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HKQ7_9EUKA) HSP 1 Score: 63.2 bits (152), Expect = 9.110e-9 Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 1 FDCALLFVDISGFTSSMERFATQGSRGTERFWRAISGYFGSLLREIYSRGGDVECFAGDAMMVSFGAEEVAS 216
F A+LF+DISGFTS ER A G+ G E + I+ YF SL++ + GGDV FAGDA++ + E S
Sbjct: 5 FPAAILFLDISGFTSLNERLAQLGAAGPELVSKHINSYFASLIKAVSEHGGDVLKFAGDALICMWAGETPGS 76
BLAST of jgi.p|Trimin1|152612 vs. uniprot
Match: A0A061R492_9CHLO (Guanylate cyclase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R492_9CHLO) HSP 1 Score: 65.1 bits (157), Expect = 9.420e-9 Identity = 55/193 (28.50%), Postives = 97/193 (50.26%), Query Frame = 1
Query: 16 LFVDISGFTSSMERFATQGSRGTERFWRAISGYFGSLLREIYSRGGDVECFAGDAMMVSFGAEEVASHP--IGALILARHLALHGDVQSEADARLAVATKVAVDAAAAMLRTMSPYTRVERDFPGPGQDMQLLLTLHGSVGAGGLTALELIHADTGETARGKRWHYVCGPVIGQLARAHAISAANDCVLSKQA 588
L +D+SGFT+ E+F+ G++ E F +SG+F I+S GGD++CFAGDA+++ F + +A H + L+L R S ++ L A+ A A+ R ++ Y PG LT+H ++ G + ++E + RG+ +V G + +L +A +S +++ VL+ A
Sbjct: 68 LLLDVSGFTALSEKFSEGGTKSFEEFSLLLSGFFARTCEIIFSYGGDIDCFAGDALLILFPST-IAVHKKRLDKLLLPRDSRNSSGGASVLNSNLIEPATRALQCAFAVSRELNEYE------VSPGLPR---LTIHAAMACGDIYSVE---CGGSQARRGEA--FVLGRPLCELRKAVDLSRSSEIVLTAMA 245
BLAST of jgi.p|Trimin1|152612 vs. uniprot
Match: A0A090AHP6_9GAMM (Adenylate/guanylate cyclase n=1 Tax=Thioploca ingrica TaxID=40754 RepID=A0A090AHP6_9GAMM) HSP 1 Score: 64.7 bits (156), Expect = 1.250e-8 Identity = 49/150 (32.67%), Postives = 75/150 (50.00%), Query Frame = 1
Query: 10 ALLFVDISGFTSSMERFATQGSRGTERFWRAISGYFGSLLREIYSRGGDVECFAGDAMMVSFGAEEVASHPIGALILARHLALHGDVQSEADARLAVATKVAVDAAAAMLRTMSPYTRVERDFPGPGQDMQLLLTLHGSVGAGGLTALEL 459
A+LF D+SGFT+ E A QG+ G E+ + I+ YF L+ I++ GGDV FAGDA++ + E S + +++ + D SE +L + T A A+ T+ Y Q+ L+LH S+GAG + L L
Sbjct: 44 AVLFADMSGFTTLAETLAEQGAAGAEQLTQIINNYFSQLIGVIHAHGGDVVKFAGDALVALWLTAEETS--LKNSLISSWQSPQEDSHSE---QLTLVTHRAAQCGLAIQETLKDYHIYN----------QMTLSLHVSIGAGEIALLHL 178
BLAST of jgi.p|Trimin1|152612 vs. uniprot
Match: A0A194RKT8_PAPMA (Adenylate cyclase type 10 n=4 Tax=Papilio TaxID=7145 RepID=A0A194RKT8_PAPMA) HSP 1 Score: 63.5 bits (153), Expect = 3.160e-8 Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 1
Query: 13 LLFVDISGFTSSMERFATQGSRGTERFWRAISGYFGSLLREIYSRGGDVECFAGDAMMVSFGAEEVA--SHPIGALILARHLALHGDVQSEADARLAVATKVAVDA 324
LL D+SG+T+ ER+ G GT R ++ Y GSL+ IYS GGD+ FAGDA + + ++ + SH I I + H E D ++ + K+A+ A
Sbjct: 85 LLMADVSGYTALSERYTNSGKGGTYRLTVTLNTYLGSLIEVIYSHGGDIIKFAGDAFLALWKTDKRSYLSHTIHTAIACALIIQHSFGSYETDVKVNLKVKLAISA 190
BLAST of jgi.p|Trimin1|152612 vs. uniprot
Match: UPI0006784BA7 (adenylate cyclase type 10-like isoform X2 n=2 Tax=Papilio TaxID=7145 RepID=UPI0006784BA7) HSP 1 Score: 62.4 bits (150), Expect = 6.950e-8 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = 1
Query: 13 LLFVDISGFTSSMERFATQGSRGTERFWRAISGYFGSLLREIYSRGGDVECFAGDAMMVSFGAEEVA--SHPIGALILARHLALHGDVQSEADARLAVATKVAVDA 324
LL D+SG+T+ ER+ G GT R ++ Y GSL+ IYS GGD+ FAGDA + + ++ + +H I I + H E D ++ + K+A+ A
Sbjct: 115 LLMADVSGYTALSERYTNSGKGGTYRLTVTLNTYLGSLIEVIYSHGGDIIKFAGDAFLALWKTDKRSYLNHTIHTAIACALIIQHSFGSYETDVKVNLKVKLAISA 220
BLAST of jgi.p|Trimin1|152612 vs. uniprot
Match: A0A7S1T3H1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T3H1_9CHLO) HSP 1 Score: 60.8 bits (146), Expect = 7.110e-8 Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 10 ALLFVDISGFTSSMERFATQ-GSRGTERFWRAISGYFGSLLREIYSRGGDVECFAGDAMMVSF 195
ALL VD+SGFT+ E + GS G ERF A+S +FG ++ I S GDV+CFAGDA++V F
Sbjct: 76 ALLIVDVSGFTALSEDAKRRLGSEGVERFSLAMSAFFGVMMDTIASCHGDVDCFAGDAVLVVF 138 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|152612 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_7152 ID=mRNA_7152|Name=jgi.p|Trimin1|152612|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=612bp|location=Sequence derived from alignment at Contig_21:381413..382024+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TTTGACTGCGCGCTCCTCTTCGTGGACATCAGCGGGTTCACGAGCAGCATback to top protein sequence of jgi.p|Trimin1|152612 >Trimin1|152612|gw1.21.174.1 ID=Trimin1|152612|gw1.21.174.1|Name=jgi.p|Trimin1|152612|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=204bp FDCALLFVDISGFTSSMERFATQGSRGTERFWRAISGYFGSLLREIYSRGback to top mRNA from alignment at Contig_21:381413..382024+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_7152 ID=mRNA_7152|Name=jgi.p|Trimin1|152612|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=612bp|location=Sequence derived from alignment at Contig_21:381413..382024+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_21:381413..382024+ >mRNA_7152 ID=mRNA_7152|Name=jgi.p|Trimin1|152612|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=612bp|location=Sequence derived from alignment at Contig_21:381413..382024+ (Tribonema minus UTEX_B_3156 )back to top |