mRNA_7089 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|350023
Unique Name	mRNA_7089
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|350023 vs. uniprot
Match: A0A835YTD0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTD0_9STRA)

HSP 1 Score: 357 bits (916), Expect = 4.900e-124
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1

Query:    1 MKHIKRPSGRQLRDYQSQESKVQYDCIGTESCRSTRFGDKTSARCLVKNACQDAIFRKGSIGNCETPYACLGATFLRKGKLVRCHVERGCQSVYINXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGACQATKFLTDEGPEIKCSGDGSCKELIVFCGGTKNQNGAKFTGGACCYGSGCPKDAPLCTGRACPANSGPECA 597
            MKHIKRPSGRQLRDYQSQESKVQYDCIGTESCRSTRFGDKTSARCLVKNACQDAIFRKGSIGNCETPYACLGATFLRKGKLVRCHVERGCQSVYINXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGACQATKFLTDEGPEIKCSGDGSCKELIVFCGGTKNQNGAKFTGGACCYGSGCPKDAPLCTGRACPANSGPECA
Sbjct:    1 MKHIKRPSGRQLRDYQSQESKVQYDCIGTESCRSTRFGDKTSARCLVKNACQDAIFRKGSIGNCETPYACLGATFLRKGKLVRCHVERGCQSVYINXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGACQATKFLTDEGPEIKCSGDGSCKELIVFCGGTKNQNGAKFTGGACCYGSGCPKDAPLCTGRACPANSGPECA 199

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350023 vs. uniprot

BLAST of jgi.p|Trimin1|350023 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YTD0_9STRA	4.900e-124	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_54	contig	Contig_54:608971..619767 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|350023\|estExt_Genemark1.C_Ctg_540078
Hectar predicted targeting category	other localisation
TranscriptId	350345
Track	FilteredModels1
ProteinId	350023

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350023	gene_7089	Tribonema minus UTEX_B_3156	gene	Contig_54 608971..619767 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350023	Trimin1\|350023\|estExt_Genemark1.C_Ctg_540078	Tribonema minus UTEX_B_3156	polypeptide	Contig_54 608971..619767 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_7089_1	exon_7089_1	Tribonema minus UTEX_B_3156	exon	Contig_54 608971..609018 +
exon_7089_2	exon_7089_2	Tribonema minus UTEX_B_3156	exon	Contig_54 609408..609458 +
exon_7089_3	exon_7089_3	Tribonema minus UTEX_B_3156	exon	Contig_54 610631..610687 +
exon_7089_4	exon_7089_4	Tribonema minus UTEX_B_3156	exon	Contig_54 611561..611620 +
exon_7089_5	exon_7089_5	Tribonema minus UTEX_B_3156	exon	Contig_54 612623..612679 +
exon_7089_6	exon_7089_6	Tribonema minus UTEX_B_3156	exon	Contig_54 613646..613702 +
exon_7089_7	exon_7089_7	Tribonema minus UTEX_B_3156	exon	Contig_54 614344..614400 +
exon_7089_8	exon_7089_8	Tribonema minus UTEX_B_3156	exon	Contig_54 615334..615396 +
exon_7089_9	exon_7089_9	Tribonema minus UTEX_B_3156	exon	Contig_54 616244..616282 +
exon_7089_10	exon_7089_10	Tribonema minus UTEX_B_3156	exon	Contig_54 619657..619767 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_7089	CDS_7089	Tribonema minus UTEX_B_3156	CDS	Contig_54 608971..609018 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_54:608971..619767+
coding sequence from alignment at Contig_54:608971..619767+

spliced messenger RNA

>mRNA_7089 ID=mRNA_7089|Name=jgi.p|Trimin1|350023|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=600bp|location=Sequence derived from alignment at Contig_54:608971..619767+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGCACATCAAGAGGCCCTCGGGACGCCAATTGAGGGACTACCAGAG
CCAGGAGAGCAAGGTCCAGTATGACTGCATCGGGACTGAGTCGTGCCGGA
GTACGCGTTTTGGCGACAAGACCAGTGCCAGGTGCCTAGTCAAGAATGCC
TGCCAGGATGCAATTTTCCGCAAGGGGTCCATCGGCAACTGCGAGACGCC
TTATGCGTGCCTCGGGGCGACGTTCCTCAGGAAAGGCAAGCTCGTCAGGT
GTCACGTCGAGCGCGGCTGCCAGTCGGTCTACATCAATGAGGGCAGAGAG
GCACTCTGCAAAGTGAAGAACGCCTGCGTGTACTTCAGCATTGGGAGGGG
GTCCAAGGCCACGTGCACGCGACCCGGCGCATGTCAAGCTACCAAGTTTC
TGACCGACGAAGGGCCGGAAATCAAATGCAGCGGAGACGGCTCATGCAAG
GAGCTCATCGTCTTCTGCGGCGGGACCAAGAACCAGAATGGCGCCAAGTT
CACGGGCGGAGCCTGCTGTTACGGCAGCGGCTGCCCCAAGGACGCGCCCC
TGTGCACCGGGCGCGCGTGCCCCGCCAACAGCGGGCCCGAGTGCGCCTGA

protein sequence of jgi.p|Trimin1|350023

>Trimin1|350023|estExt_Genemark1.C_Ctg_540078 ID=Trimin1|350023|estExt_Genemark1.C_Ctg_540078|Name=jgi.p|Trimin1|350023|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=200bp
MKHIKRPSGRQLRDYQSQESKVQYDCIGTESCRSTRFGDKTSARCLVKNA
CQDAIFRKGSIGNCETPYACLGATFLRKGKLVRCHVERGCQSVYINEGRE
ALCKVKNACVYFSIGRGSKATCTRPGACQATKFLTDEGPEIKCSGDGSCK
ELIVFCGGTKNQNGAKFTGGACCYGSGCPKDAPLCTGRACPANSGPECA*

mRNA from alignment at Contig_54:608971..619767+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_7089 ID=mRNA_7089|Name=jgi.p|Trimin1|350023|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10797bp|location=Sequence derived from alignment at Contig_54:608971..619767+ (Tribonema minus UTEX_B_3156 )
ATGAAGCACATCAAGAGGCCCTCGGGACGCCAATTGAGGGACTACCAGGT
CATTGAGACCACACTTAATGACGTGATCTGCTTTGACAATATAATATTTG
CGAGGTTGTACTTCACCCTTTGGACTGAGACAACCCGTGCATGGCACAGT
TATGGCCCCCCTCGGAACGTACCGCAGCAAGCACCCTCAGGTCTTCCGCA
GCACTTCAGCATCGGAGTGCGCCGTGCATTAATCACGCCATGCAACTGAT
GCACCAAGCACCGCTGTTGCATGGTTATGCCGCCTCGTGCACTTGACCTC
GCACAACTGCAAAGTGAGCTCATATCAGTGAGCTCATATGCCAGCCTGCC
AGTGGCATCTGGCACTGCATTGCATGTCCGTTGTTAGCTGACCCATCTGA
CTCGGAGCTTGTTGTCTCTATGCGCCTGCCCCCGCAGAGCCAGGAGAGCA
AGGTCCAGTATGACTGCATCGGGACTGAGTCGTGCCGGGTGAGCGTTGAA
TTCTGCGTCCTCTTGACGTATGTCAGAACTTATGCGACCTCTTGCTCGGT
ATTGTGTACTGTAGAGGTCGCAGCGCCCTCAGTGAATATGGTCAAAGCGC
GTGCCTCCTCACTCTATCGCACTGTGGCATCTCACGACGCTCATTAAGGA
ATGGTGCAGACCTGCATACCTGGTTGTGGAAGCGCCACTACAGCTGTGCT
GAGCGGTGTCACCAGTTGCAGTGAACCAGGTGCCAGCGTTTATTATAATC
GATGAGTCCAGGCTGTTGTACCGCATTGCAAGTGTCCCTGCCGGGCAGCA
TGTGGCTTCTCTGGTATGCCCGCTTGGTGTGGTCAGATCTCGCAGCTGCC
CTTGTGAGGCAGGGTATTCAGATCTGTCACTCACGCGTGCGACTTCTGCC
TGGAAGTGCTCGAGGTGAACAATCTCCCCAGTGTCGTCGCAGATCGTTGC
ACCATTTGGTGACGGACGGCTCTGTGCACCCTTGTGGCTGGGGTTACGGG
AATGCCAGCCACGGTCCGCAAATGTCGCAGTTGTTATGGTGAGCTCTATG
GTTGTGCGGTTCCAATGGCCTTGTCGACGCCATCACAAATGACCGCGCCT
GCAGACGTGCGCGCGTGGGTGTGTGGGCGGGTGGGTGGGGGGGGGGAGGC
AAAGCCCTCCATCTACATTCAAGAGTTTCAACGCAGGGCAGCATACCCTC
AATTCACTACTGGCCGTGCACCCCAGGTCTCTGAGGCCCTTCGGACCAGC
CGTTGGTGGCTTATCTGGAGGGGTCCGCTCCACTGCATGGCCTACGGTAC
ACATTAAGTATGGTGTGCGGCAAAGTGGTGACGTCCTTGAACGCCACTGA
CTGCAGCGCCCTTTTAAAAAGCCAACATATGAAAGTGGCGACGAAGAAAG
CAGGAACGCGCGCATGTGGTAGACTACATATGTCACTGGAGCCCCAAGAT
AAGCCATGCGGAGTCACTTGTGATCTACCTGGCCTTCGGACGTTGTGAGG
TGCAGCAATACCATTCAGTTCAAAGGGTGCCCACCCAGGAGGGGTGCAGC
CGCCCCCGTGATGTCAGCATTGCTCAGGTCCATGAGTGCGGTGGAAGAGG
CGGTACGCAACTTAATGTTCCAATCCGTTCCTGTTTGCACTTCATGCGCT
GCTGGCGCAGAGTACGCGTTTTGGCGACAAGACCAGTGCCAGGTGCCTAG
TCAAGAATGCCTGCCAGGTACGTTTTTGGTGAGCGCTAGCGCTTCCCGCT
ACTGCCTGAGCTCCAGAGTTGTCGTAGCCTTGCGGTGTAGATGCAGTGAA
AGCAGCGAAATCAAGGCTCTTGGGAAGGCGCAGGCAAATATGCCTACATA
TGCTGCAAGATTATCTACGGACGCCCCGACTGATTGATGCAGACATGAGA
TGACCCCCTTTTGAGGTGTCCGCCATTCGCGTGAGTGATCGATCATGCAC
ATGGAGGTGGGACGTGGTTTACAACTTACGTCATACTTGAATGGTGGAGC
ATATGGGTGTACATCATTTTGGCAGTACTTGTGCTGCTCATGAGGCTTGC
AATGCAGTCAGGGCGACATTTCGCTTTGGTACTGCACGCTGGCAGCCGCA
CATAGCTTCCATGCTCTATACGCTGTGTGTCACAGCCTGCTGATCCAATC
AGGATGGCCGATGACGTGTTGCGCATCCTTAAGTAAAGTAATTACACTGC
GACCGAGCGACAGCGCCTTCAGCATCAAGAAGCGGCAATTGTGTGTGTGC
CACGAGGTGTCAGGAACTCTGCATTTCGATGCAGTAGCAGAGCACTGGCA
CTGGTGCCAACACACGTGGGCGCATCGCGTTGTATTGTACCACATTGCCC
TGCAGGGTTCCTGACACACCTGAAACGTGTCCGTGGCTGTCGACAGTGGC
GAATCATTACACGTGCGCACCATCGCTATGCTCAATTGCTTGTGACTCAT
GCCTAGTCAGTGCCGGGAGGTGCACACATCATCAACTGGCAGGAAGCTCC
TGCTGTGACCTTTTTTATTACTTTTTCTACCGTGCCCGCTGTGCCTGAGG
CGACAGCTGAATGCTGCACGATTCGTACTTGTGTGTGCAGGATGCAATTT
TCCGCAAGGGGTCCATCGGCAACTGCGAGACGCCTTATGCGTGCCTCGGG
GTGAGTTGGTCGATATACCGTATATGCCCCAGTAAACGCCCCCCCCGGCG
TGCGGATCTGGGACTTTGCACAGCACGCCCATGGGCGTATACAGGAGCGG
GGGGGGCCGTACAAGGGGGGGGGGGGGCTTAGCTGCTCCAATTTGAATTG
CCAGCTAGCAGGGGGGGCGTTTACTAGGGCCCGGAGGGCGTTTGAGCACA
AAGTTGTGGTGGCGATAGCGGACATCTCTGATAACGGCAATGGCGGTGCT
GGCGAAGCTGCTGCAGCTACATCAGCTCTTGTCAAGCGAGCATTGTTGCC
TGTGTGACCATGCATCGGCAGTAGAGAAGCTCAGACCGATAATGAGTTCA
AGTTCGGCTTAAAGTTCAGCTTAATTCGGCTTCGCCGGGGGTGTTTTTTT
GCGAGCCAACCTGCAACCATTTGGTTGCTAGGGGGCGTTTATAAGGGGGG
GGTGGGCGTTGTTGCCCACTTTGCCCTGGCAGCACGCCCATGGGCGTTTA
CGAGGGGGGGGGGGGCTGTACAAGGGGGGGGGCGTTTACTGGGGCATACA
CGGTAGTTTCTTTGCAAGGACGTCACGTGACGCTATGGCGGCCTCCACGA
TAAGAGGACATAGGCTGACTCATTGGTGCTGCTTTCACAGTCCTCATCTT
TTTCACCACCCGAATGCTCATGCAACACGAAATGCATGCCTTTGACGGAA
TTGAGAGCACTTGAGCGCGCACGTCTGAATGTCAAGCGATGCCTTTGTTC
GCACGAGTGCGTAAATCAGAGGGCATCTGTCTACCGGCGCGCTTACGGGC
ACATACCGTCACAGGTGCTCTTAGACCTTTGTGCACAGGCCTGTCGTTAA
TGGGCTCAGTTCTGACACTTCGCTGCTCTGTTGGCTTTATAAATACTGTC
ATAAAAATGCGTGCCAAATGAGTTCTAGTGTTTGCATACATGGGATCTGA
GACTGCCACCTGTCAATTTCCCTGCCCTCTCTGCCAATGTTACTGCTGCC
AGGCGACGTTCCTCAGGAAAGGCAAGCTCGTCAGGTGTCACGTCGAGCGC
GGCTGCCAGGTGAATTACAGCAATGGGCTTGGTGTCAGTGCTCAGTGACT
GGCATGACCTACGTCTTTTAAGCGTGTGTACACAGGAAGCAAATAAGCAA
AGGAAAGATCACAAATGCAGTTTAAAACCGATGTCCTGTACGTTCGAGGT
TCGATTGTCGATGCGCGGATGGATGCTGTGTACCATGAGTCTTGCTTTTC
TGCGATGCGCACTCTTTGGACTTCAATGTAGTGGTCTAATTTAGAAGTGC
TGCATGAAGAGCACCGGTCTCAATTGACAGCGGCAGCGGAGATGCTGCGC
CATGGTGTAAACAGAATGAGCGATGCGGTTCAAGCTGTGAGGAAATGACC
GGCCTTGAAAATCCAAGGGAGACCTGCGGGCTGCCCATGCAACTGGTGGC
GATGGTACATATCGACAGTATACAATAACTATTTAAGAAGTGGACTGCCT
GAAAGGCTATGCCCAGTGCTGACAGCTTTGTTTCAAAACACCACATGTGT
GGTATGCATGCATGATGTGCGTATGATTGCATGTCACTCACGCTCTGCCA
CAACGTGTGAGACTGTCTGATGGATGCAGATTAGATGCTTGCCGCACCCG
CGTGGGGGGCGGGCATGAGTACTGTGCGGTCAGGACTTGCATAAGGGTTG
GGAATGGGGGGGGAAGGCCAGGAACGGAAAGCCGGCATAGGCCATACAGC
ACCTCCTCACTGCCCTCATCGATGAGTCATTACATACACTACACTCCAAA
CACACCCTCAAACATATTCCACTGCCAGATACATTGCTATTCAAGTAACT
CGAAGTAGCAACAAGCGCAGCAGCCTCGCAACACCAAAAGGCGTTAATCA
CGCTTCACTCTGTAATCACTGCCACCCTCAGCCGCTGTCGTATTGATGCT
CAGCACCTATGCGTGATCTATGGCCTTCGTGTTCTTCCTCCTGCGTACTG
CTTGTGCTGTCCTTACCTGCGGCAGTCGGTCTACATCAATGAGGGCAGAG
AGGCACTCTGCAAAGTGAAGAACGCCTGCGTGGTGAGTGGCTGCGATCTC
AGAAATGACACTTTTATAAATAACTAGATTGGTGCGCTGCAGTATGTATG
TACCTGCTTACACATTGCAGTACTTCTTTGAAGTGCCTTTAATGTCTCAG
AGTTGCATGTTGAGCAACTTCTGTCTTGATGTGCACGAGCGCTTGCATCG
CAAAGTGCTTGCAACCTGATTGATGAGCTAACTGCAGCATGCAATATATA
TACTGCTACACTTGGAGTCGCAGCATAGCCCCACCATTTTGCAATTGGAT
AGCGTCAGCTTGGGGTCCAAGCTCTGACTCCAGTAGTCGGTAGACACAAC
AAACTTCATTTCCACGCATGGCCATTGAGCACAACAGGAAACTGAACGCT
GCCGTCTCACCTGATCTTGTGTGACTGGCCTGAGCTCACGTGGACAGAAC
CAGAATGATCCGCTACGCACACACGCAAGCATGCACAGTACGCTTGCGCA
GCATGCTTGGCCATGCTAGTACCTGCCGTCTCGTAAACTCGGGCACAAGG
AGTGAGCCGAGTCAAGCTGCACCGCTGGTGGCCTCATCAACTAAGAACTG
TCAGGTGTGAGGCGCGTAATCCATTGTGCTCATGCACTTTGTTGCGCTGG
CATTGTGCTGCGTACGCCTGCAGTACTTCAGCATTGGGAGGGGGTCCAAG
GCCACGTGCACGCGACCCGGCGCATGTCAAGTGAGTGCGCGCATCGTATC
TTTCGGCGTATACAATCACATTTATCAATGGTGCCAAGCTTTTGACATCC
TTGCAAGAAGACGCTTCAGCCAGTGTTGCTGCGGTTACGTGGTTACTGAT
TTTAAAGCCCCAAAGCATGAGCGCGGTTGGTCAGAGCCACACGCTACACA
CAGAGTGCATTGGGCAGCAGCCTGTGTAGTGTGTGCGCAAGCTGAATACG
GCTTTTGCACAGGATTTGACGCAAAGGTTACCCGTCACCATCCACAGTAC
TTGAACAAGTATGACATACATACCATGCAGTACACATGTCGACACTGCAA
ATGCCAACAATGTGCGAGCTCCGCTGCTACACTTAACTTATTGAGGCATG
CACCAGGTGTTGAACAGGGGGCTTCCTGATGTCTTCTTCTTTGCTTTGAA
CTGGAAGTCTCTGCGGTGCACCATGCCATACCATGCATAACAATGGCTCG
GTCAACAGCGCAATGTTTCTCGGTTTTTCCCGCTGTCACAGAGCTTGTTC
ATCGTGGGGAAGGGCGCTATGGTCGACTGCCAAGGCCAGGCCTGCGACGC
AAGTATGAGCATCCCGATCCTTCAAGGATGAAGCACTGCACGCGTGCGAC
CTTCGCTAACTCTGTGATGCTTCACAAACTTCACAGCGTGTTTGTCACAA
TAGCCGGCAGTTGATCGATAGAGCTGGTGCTGCTGCTTCTGCTACAGTCG
CGTACAGTGCTCGTTGTTCAGCGCCCCTGATACTCGATGATGAAGTGCCC
ATCACACATTGCAAGTTCAAGGTGGTATGCTGTGCAATACTGTGCAAACT
TATCCTTCAAGGCACGATAGCGCCTGTTGAATCTTCACACCACGGAGCAC
AACAGCTGTCTGGTGACATGGCTTTGTTTTACCCTAGTCTCTTGCGGGTG
GTGGTGCATGCAGGCTACCAAGTTTCTGACCGACGAAGGGCCGGAAATCA
AATGCAGCGGAGACGGCTCATGCAAGGTAAATCACTGCATCTGAAGCATC
CAGATTAGAGCTTATTTGCGGTATGCTGTATCGTCTGCTCATAAATTTGA
GAATGGCCTTCAACAATCAGCATTTCCAACATTATACGGTCAGATCTGTT
GTACCTTCAGTGACTGTAGTGGTTTGCTACGCGGAAACTTGTTTCCTGCT
GCCGTGACGCGCGAGAGATGATAACTGTGGCAGCGACAATTGCCAGGACA
CAACCAGCAGCCGTATGTCAGTGCTCGTTATGCACCATCTCCATCTATCT
GTTGAAGGTGCTTGAACAACGGTTTGAGCGGCGTGTGCGTGAAGCTCCTG
CCATATTTCTATGAAAAACGTGAATGTGGCTTCATTCACTCATCACCATT
GTGGCAACTTAAGTCCAGCTGCTGAAGGGCGTCAGACGACGCTGCACGTG
GACGTTGCTCAGCAGATTTTATACTGATACTCTGTGTCTTCACATATTTT
CACACTTGTAAATTATGCCCCAGCAGCAGTTGTGCCTGCACCTATGCGTT
GCCAACGCCTGTGCGCTTTTCGTTATGTCATTGCCGTCTCTGTGTGTTCG
CCCCTTCTGTGTTTCACAGTTTATTGCAAAAGTATGGCTCTCATATGCAG
CAGCTCATTGTGCACGCATGCAAGCAGGCTGGGGACCGCGTCACTGTGAC
TAAAGCTGAAAATGAAAATGACTTCACAATCAAACAGAAAGAATTGTTGA
TGCTGCGCTGCTTCATTGCCCTTGCCACCCTCTCAGTTGTGGCAACCCCA
CTAAAGGTTCTCACTACTTTTGTTGCCATTCATTTCATGTTCATTTGTGT
GCACTCTGTTTTGCCCTTGGCAGGAGCTCATCGTCTTCTGCGGCGGGACC
AAGAACCAGAATGTGAGCATTGTGCTGAGCTCATGTTTTGTCACGCTGCG
CATGCCACATGTAGAGCACGTGCATGACCAAACCAGGCCTCCCAACACTT
TTTCGGCAGGTTGGTGGTGTGATGGCTTGCTTGGCTTGCTTGAGGTTGCA
GCAAGCTATCTCAATGAACAAAATTGTTTGGGTCAGGTTGGTTAGAGGTC
AGCAGCCCTACTGATGCTGAGAATAGCACCCTGGATTTGCGGTGTGCCAT
TGCTGCATCGCATGCTGATGGCAGGAATGCGCCTTATGACACCATCATCA
AGTTAGGGTTAGGGTCAGCTTGGGAGGTTATCAGCCCTACGCATGCCACA
TGTGACGCATAAGGAGGCTGTTGAGGCCTCGGCCAGGGGCTCAAGCGTCT
CATTTTTTGTGCTTGGCCAGTATACTCTGACGTGCTCAGCTGACGGAAAC
GGCACAAAGCATGACCAAACCCACCCCACTAGGTCGCTGGCACGTCAGCG
CTGCTTTTGATGCCTGCGCGAGCCTAGTTCCGTCTGCCATCAAAGTAGAA
CTATATATTTACAATTATGTAATGCTCGCAAAAATCAGCATTTTGTCGAC
CTCAAATTTCAGCGAGCTTCTGGAAGACTGGACTTCCTGATTAGAGCTTC
GGCTTTCCTTCATTTTTGTAAACGATATATATGTTTTTCTTTCCTTCCGG
GCCACCGCCTTCGCATAACCACTCGCAAAACAAGAGTCAGTCATTTTTTA
GCCACAGCACTGTCGATCGCCGTGCACATCGAGATAGAGCGTGTGCGATG
GCTTCAGATAATGCTGAGCAATAGGAAATAAAAAGCCATGTAGTCAGACA
TGCTGAATGTGTGCGGCGTCTATCGCGGCTCATTCAGCTGCACGCAGAAA
AAATGTACGTCGAAAACAGAACAAAGCGTACTCATCGAGATAGAGCGCGT
GCGATGGCTTCAGGGACTGCTGAGCACTAGCAGAGAACAGCCATGCAGTC
AGCACTGGCGCTGAGTGTGTGTGGCGTGCTACCGCTACCGGCAATTTGAC
AACTTCAAACTCAAAAACAAAAATAGTGTGTCCCTCGTTAGCGTGACGAG
AGATGCGCAGCGCATGGATGACACCGCCGTCGCTGCCATACACCATGACT
TTGCGAAGCGGATAGCTTGTTGGCATTTTTCGCAGATGTATCTTCGGAGT
GACCGGTCTTCTTGTGTCTGCTGTTTCTCATCCTGCACGCTCTGCCGCTT
GTGTGCCGCCCACAGTGCACAGCCGTCAAAAGCATCACCCACTGCTCAGG
GGCGGACAGCTGTCACGTAAGTCGAAGCTCTAGAGTTTGCTCTGTCCATT
GCCATATAGCCATTTTGCTCGACAGCTGCCATGGAATTTACAGTCTGGCG
TTGCGACAGCCATGTATCAAGGATTTCTTGTAGAGGTATATATTTAGACC
ACCCAAAGGGCTCCTCGTCCTTTCTTAGCTCAGCACATATGTTAACACTT
CACTGAGGGAACGTTTGTGCCACGTGTGCACTCCAGCTTCGCTCTGCTGC
CACGATTAGCCACTTACTTTCCAGGCATATGCTGTCATGTGCTGTGATCC
CTCTGCCGAGGTAGCCAGGGGCATATGCTGCGGTCCGCTGCGGCTTGATG
ACCAGAGGACAGGCCTTCTCTGACCTGGCCAGGCAACTGACTCACGCCTC
GCACAGGTGCACAATATTTCACTGTATCGTGTCACCATAATTATCTTTGA
ACGCCTGTTTTGCCCACCGCTGTTGCAGGGCGCAATGTTTCGCAGCAAGC
ACGTTACGGCCCACTGCTGGTCAGGCAACTGCCAGGTTAGTAGGCCGATA
ACACAGGCGCCCTGCACTCCCATGCTAAGTGAGTCAAAAGCTGAAGGTAA
AACTTACCTGTTCTATGGAGAACTGGCGTGAGCAAATCACGTACACCACG
TTATGTCTGCTTGCAATGCCTTTCCAGTGAGTGCGCTTATGCGCGTGCGC
TTGGCGACACTCAAGCAGGCTGCCACACAAGCACCTGATGTCAGGTACCG
TAGATCACGGAGTATAAAACCCCCCTCTTGTATAAGAACCCCCCATCGTA
TACTGTAGTATAAGACCCCCCATCTCCCTAGGGAGGTATGTGTGTGTGTA
CGCAAGACCGGGGGTATGCTGTATAAGACCGGGGTAAGCACGTGTTGTAT
AAGACCGGGGTCGTAGACAACGAACACATGGTAGTTACGCAAACTTCAAG
TCGTTTTGGCATAATTCAGCGCGAGGGACAGTTGTGGTGCACCGCAAAAT
CAGGTGGTGCGAGCTGCGTTACTGCGCAATGCCTCTGCAGCCGTGAGTTG
TAGTGCAAAGGGCGTGTCTGAACCAGGCGTGCTAGAATAGGAGCTGCAGA
ACGTTCATTTGTGGCCTGTTGCTTGCAGTAGCTGTGTGCAGCAGTACATA
TCATGCGATATGTGCTACCGCAGCCACTCACGCGCGTGCAAGACGGGGGG
TACGTTGTATAAGACCCCCCCCCGGTATAAGCGCCCCCGTCTTCCGAACA
CGGGCCTCGCAGCGTGCTAAAACGGGGGGGTTTCATACTCCGTGATCTAC
GGTAGTAGAGTACCATTGTGTCCTCCATTAATGGACGGAGACATGCCTCT
GTGCCCATAAATAGAGAGCACAGCTGCACGAAATCACAATTTAAACAATC
GCCAACTGTATGTAGAGGGTCCAGAGCCGCTGATCAGCAGGCACATAAAT
GCAACTCAGCCTAGTTTCCCCTAGAGGTACATGATCTTTCTACCCCCACC
CCCTGCAGTTGTTGAAGCATCAGTACAATGTATCCCCCTACTCTGCAGCG
CGCATGCTCGTACGCCATTACACGGTCTGAGTTATGAGTGCTTACTCCGC
AGCATCGTGTGCTAAGGCCGCAGACAATGCCCAGTGCTGTATGGTGAAAC
GGCGCCCTTGCCGACACTTCGTCAGAGTCGGTCGCAAGCAATTTGCAGGT
CAAGTGCGCTCACAACATGCAGCGGTGGGATTTAGGTAGTGCGGCGCTAT
ATTGGCGCGCACTGTGGCACGCTCGGATGACCCGAGCGTGCTTGACTTGC
ACCAGCCCGGAGATGGGGCCACCAGCCGAGTGCGCGATCGGCCCTCTTCT
TCGCACACACACAAAAGCCACCTCCTGACATAGGCATCTGCAGTGGCATT
ACTTAGCGACGTCACTTTTCATGCAGGGCACCGCGTCAATGTGTGAACAA
CAAGCATGTACTCCATGTGAGCAGTCTCACCACATCGACAAGCGAACACC
CTCTGCGAAGTGTCGCGGGTATACCTCCAACCCGCGCTCTTGAACAGTAA
CCTTACTCGGAAGCATTCCATCTTTTGTGAGTGCAGGGCGCCAAGTTCAC
GGGCGGAGCCTGCTGTTACGGCAGCGGCTGCCCCAAGGACGCGCCCCTGT
GCACCGGGCGCGCGTGCCCCGCCAACAGCGGGCCCGAGTGCGCCTGA

Coding sequence (CDS) from alignment at Contig_54:608971..619767+

>mRNA_7089 ID=mRNA_7089|Name=jgi.p|Trimin1|350023|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=600bp|location=Sequence derived from alignment at Contig_54:608971..619767+ (Tribonema minus UTEX_B_3156 )
ATGAAGCACATCAAGAGGCCCTCGGGACGCCAATTGAGGGACTACCAGAG
CCAGGAGAGCAAGGTCCAGTATGACTGCATCGGGACTGAGTCGTGCCGGA
GTACGCGTTTTGGCGACAAGACCAGTGCCAGGTGCCTAGTCAAGAATGCC
TGCCAGGATGCAATTTTCCGCAAGGGGTCCATCGGCAACTGCGAGACGCC
TTATGCGTGCCTCGGGGCGACGTTCCTCAGGAAAGGCAAGCTCGTCAGGT
GTCACGTCGAGCGCGGCTGCCAGTCGGTCTACATCAATGAGGGCAGAGAG
GCACTCTGCAAAGTGAAGAACGCCTGCGTGTACTTCAGCATTGGGAGGGG
GTCCAAGGCCACGTGCACGCGACCCGGCGCATGTCAAGCTACCAAGTTTC
TGACCGACGAAGGGCCGGAAATCAAATGCAGCGGAGACGGCTCATGCAAG
GAGCTCATCGTCTTCTGCGGCGGGACCAAGAACCAGAATGGCGCCAAGTT
CACGGGCGGAGCCTGCTGTTACGGCAGCGGCTGCCCCAAGGACGCGCCCC
TGTGCACCGGGCGCGCGTGCCCCGCCAACAGCGGGCCCGAGTGCGCCTGA