mRNA_7065 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|147637
Unique Name	mRNA_7065
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|147637 vs. uniprot
Match: A0A835YPT7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPT7_9STRA)

HSP 1 Score: 353 bits (906), Expect = 4.330e-123
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1

Query:    1 TQGFSSKVSLVLLLANTLRVAFWFQKRFDNTLLIQSVLLIGMQLALLQALAGSKQALARKEGRQLQLSPVRHFWAWDSFGLYFGVTVLFSAVLALVSTYMYRFEWYTEGLGATAVSFEAVMSLPQMMRNFAQKSTAWLSLFMVCGWLGGDFLKIAYFLAKGVPAVFFYGAFVQTALDATVAL 546
            TQGFSSKVSLVLLLANTLRVAFWFQKRFDNTLLIQSVLLIGMQLALLQALAGSKQALARKEGRQLQLSPVRHFWAWDSFGLYFGVTVLFSAVLALVSTYMYRFEWYTEGLGATAVSFEAVMSLPQMMRNFAQKSTAWLSLFMVCGWLGGDFLKIAYFLAKGVPAVFFYGAFVQTALDATVAL
Sbjct:    1 TQGFSSKVSLVLLLANTLRVAFWFQKRFDNTLLIQSVLLIGMQLALLQALAGSKQALARKEGRQLQLSPVRHFWAWDSFGLYFGVTVLFSAVLALVSTYMYRFEWYTEGLGATAVSFEAVMSLPQMMRNFAQKSTAWLSLFMVCGWLGGDFLKIAYFLAKGVPAVFFYGAFVQTALDATVAL 182

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BLAST of jgi.p|Trimin1|147637 vs. uniprot
Match: A0A835YRA4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRA4_9STRA)

HSP 1 Score: 237 bits (604), Expect = 1.810e-73
Identity = 117/151 (77.48%), Postives = 133/151 (88.08%), Query Frame = 1

Query:    7 GFSSKVSLVLLLANTLRVAFWFQKRFDNTLLIQSVLLIGMQLALLQALAGSKQALARKEGRQLQLSPVRHFWAWDSFGLYFGVTVLFSAVLALVSTYMYRFEWYTEGLGATAVSFEAVMSLPQMMRNFAQKSTAWLSLFMVCGWLGGDFLK 459
            GFS  VSLV+L+ANTLRVAFWF+KRFDNT+L+QS+LLIGMQLALLQALAGSK ALA++EGRQL LSPV  FWAWDSF LY G T LF++V+ALVS+ +YRFEWY EGLGA AVSFE+VM LPQ+ RNF  KSTA LS+FMVCGWLGGDFLK
Sbjct:  113 GFSPNVSLVILVANTLRVAFWFRKRFDNTMLVQSLLLIGMQLALLQALAGSKWALAKREGRQLALSPVGDFWAWDSFALYLGATALFASVVALVSSVLYRFEWYVEGLGAAAVSFESVMGLPQLTRNFMHKSTAGLSIFMVCGWLGGDFLK 263

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BLAST of jgi.p|Trimin1|147637 vs. uniprot
Match: A0A3P8YDT6_ESOLU (PQ-loop repeat-containing protein 1 n=2 Tax=Esox lucius TaxID=8010 RepID=A0A3P8YDT6_ESOLU)

HSP 1 Score: 124 bits (312), Expect = 3.720e-32
Identity = 73/182 (40.11%), Postives = 109/182 (59.89%), Query Frame = 1

Query:    1 TQGFSSKVSLVLLLANTLRVAFWFQKRFDNTLLIQSVLLIGMQLALLQALAGSKQA--LARKEGRQLQLSPVRHFWAWDSFGLYFGVTVLFSAVLALVSTYMYRFEWYTEGLGATAVSFEAVMSLPQMMRNFAQKSTAWLSLFMVCGWLGGDFLKIAYFLAKGVPAVFFYGAFVQTALDATV 540
            T+GFS++V L+LL+AN LR+ FWF K+F+  LL+QSV++I   LA+LQ     +QA  ++ K+     L  +R+FW+W SFG Y      F+ + ALV+  +     + E LG+ AV FEA++ LPQ+++NF   ST  +S+ MV  W  GD  K AYF     P+ F+    VQ  +D  +
Sbjct:   44 TEGFSTRVCLLLLIANILRIFFWFGKQFELPLLLQSVVMIITMLAMLQLCCNIQQANRVSTKQHHFTDLD-LRYFWSWSSFGDYLLFCFAFTVICALVTLLLLDSVLFVEALGSLAVLFEAMLGLPQLLQNFHNHSTRGMSVKMVLLWTTGDVFKTAYFWINDSPSQFWVCGAVQIFIDVAI 224

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BLAST of jgi.p|Trimin1|147637 vs. uniprot
Match: A0A087Y238_POEFO (PQ-loop repeat-containing protein 1-like n=8 Tax=Poeciliinae TaxID=586240 RepID=A0A087Y238_POEFO)

HSP 1 Score: 122 bits (307), Expect = 2.290e-31
Identity = 73/184 (39.67%), Postives = 109/184 (59.24%), Query Frame = 1

Query:    1 TQGFSSKVSLVLLLANTLRVAFWFQKRFDNTLLIQSVLLIGMQLALLQALAG--SKQALARKEGRQLQLSPVRHFWAWDSFGLYFGVTVLFSAVLALVSTYMYRFEWYTEGLGATAVSFEAVMSLPQMMRNFAQKSTAWLSLFMVCGWLGGDFLKIAYFLAKGVPAVFFYGAFVQTALDATVAL 546
            T+GFS++V LVLL+AN LR+ FW  K+F+ TLL+QSV++I    A+L       S   ++ K+ R   L  VR+FW W SF  Y      F+A+ A+++  +     + E LG+ AV FEA++++PQ+++N   +ST  +S+ MV  W  GD  K AYF+    PA F+    VQ  LDA + L
Sbjct:   48 TEGFSTRVCLVLLVANILRIFFWIGKQFEVTLLLQSVVMIVTMFAMLHLCCSVHSSNRVSTKQHRLTDLD-VRYFWKWSSFEDYLLFCFGFAALCAVLTLLLLDSAMFVEALGSLAVMFEAMLAVPQLLQNLQNRSTRGMSVKMVLLWTAGDAFKTAYFVMNESPAQFWVCGSVQILLDAAILL 230

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BLAST of jgi.p|Trimin1|147637 vs. uniprot
Match: A0A662YS23_ACIRT (PQ-loop repeat-containing protein 1 n=4 Tax=Acipenseroidei TaxID=186622 RepID=A0A662YS23_ACIRT)

HSP 1 Score: 122 bits (305), Expect = 4.890e-31
Identity = 72/184 (39.13%), Postives = 107/184 (58.15%), Query Frame = 1

Query:    1 TQGFSSKVSLVLLLANTLRVAFWFQKRFDNTLLIQSVLLIGMQLALLQALAGSKQALARKEGRQLQLSPV--RHFWAWDSFGLYFGVTVLFSAVLALVSTYMYRFEWYTEGLGATAVSFEAVMSLPQMMRNFAQKSTAWLSLFMVCGWLGGDFLKIAYFLAKGVPAVFFYGAFVQTALDATVAL 546
            T+GFS++V LVLL+AN LR+ FWF K+F++ LL QS+++I   LA+L+ L  S Q   R   +Q   + +  R+FW+W  F  Y      F+ + AL++        + EGLG+ AV  EA++ LPQ+++NF  KST  +S+ MV  W GGD  K  YFL    P+ F+     Q  +D  + L
Sbjct:   51 TEGFSTRVCLVLLVANILRIFFWFGKQFESPLLFQSMVMILTMLAMLR-LCCSVQTANRVSAKQHYFTDLDLRYFWSWARFEDYLLFCFSFTVLSALITFLFLDSVLFVEGLGSLAVLTEAMLGLPQLLQNFQNKSTRGMSIKMVLLWTGGDLFKTTYFLVNEAPSQFWLCGITQICIDIAILL 233

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BLAST of jgi.p|Trimin1|147637 vs. uniprot
Match: A0A4U5PDP6_STECR (Uncharacterized protein n=2 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5PDP6_STECR)

HSP 1 Score: 124 bits (311), Expect = 1.290e-30
Identity = 72/182 (39.56%), Postives = 101/182 (55.49%), Query Frame = 1

Query:    7 GFSSKVSLVLLLANTLRVAFWFQKRFDNTLLIQSVLLIGMQLALLQALAGSKQALARKEGRQLQLSP--VRHFWAWDSFGLYFGVTVLFSAVLALVSTYMYRFEWYTEGLGATAVSFEAVMSLPQMMRNFAQKSTAWLSLFMVCGWLGGDFLKIAYFLAKGVPAVFFYGAFVQTALDATVAL 546
            GFS  V L L +AN LR+ FWF   F  TLLIQSV+++     +L+      + L  K  R   L    V  FW W+    +     LF+AV A ++  + ++ WY +GLG  A+  EA++ +PQMMRNF +KST  +S+ MV  WL GD  K AYF+  G PA F+  A +Q  +D  + L
Sbjct:  189 GFSLYVCLALCVANILRILFWFGVHFKTTLLIQSVVMLCCMFLMLEISVRMNRKLVNKSQRTSILKGHFVSAFWQWNDLKSFAVALALFTAVAAGITAVLLKYPWYVQGLGFVALLVEAMLGVPQMMRNFQRKSTTGMSVKMVLMWLVGDVAKTAYFVIHGEPAQFWVCAILQITIDIIILL 370

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BLAST of jgi.p|Trimin1|147637 vs. uniprot
Match: UPI001403DF0C (solute carrier family 66 member 2-like n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001403DF0C)

HSP 1 Score: 119 bits (299), Expect = 3.480e-30
Identity = 73/179 (40.78%), Postives = 101/179 (56.42%), Query Frame = 1

Query:    1 TQGFSSKVSLVLLLANTLRVAFWFQKRFDNTLLIQSVLLIGMQLALLQALAGSKQALARKEGRQL--QLSPVRHFWAWDSFGLYFGVTVLFSAVLALVSTYMYRFEWYTEGLGATAVSFEAVMSLPQMMRNFAQKSTAWLSLFMVCGWLGGDFLKIAYFLAKGVPAVFFYGAFVQTALD 531
            T+GFS+ V LVLL+AN LR+ FWF + F+ TL+ QS++LI   LALL      +Q+      R L     P R+FWAW  F  Y    + F+ V  LV+  +   + + E LG TAV  EA++ +PQ+ RNF  KSTA +S+ MV  W  GD  K AYF+    P  F+    +Q  +D
Sbjct:   47 TEGFSTHVCLVLLVANILRLFFWFGRHFEVTLVWQSIVLIFTMLALLHLCCELQQSSTLSTSRHLFTDFDP-RYFWAWSRFLDYIQFCLSFTMVCLLVTYLLIDSQLFVETLGFTAVLIEAMLGVPQLCRNFKNKSTAGMSVKMVLMWTLGDIFKTAYFIINATPVQFWVCGALQICID 224

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BLAST of jgi.p|Trimin1|147637 vs. uniprot
Match: A0A3Q3D774_HIPCM (PQ-loop repeat-containing protein 1-like n=2 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q3D774_HIPCM)

HSP 1 Score: 118 bits (296), Expect = 9.520e-30
Identity = 71/184 (38.59%), Postives = 108/184 (58.70%), Query Frame = 1

Query:    1 TQGFSSKVSLVLLLANTLRVAFWFQKRFDNTLLIQSVLLIGMQLALLQALAG--SKQALARKEGRQLQLSPVRHFWAWDSFGLYFGVTVLFSAVLALVSTYMYRFEWYTEGLGATAVSFEAVMSLPQMMRNFAQKSTAWLSLFMVCGWLGGDFLKIAYFLAKGVPAVFFYGAFVQTALDATVAL 546
            T+GFS++V LVLL+AN LR+ FW  K+F+ TLL+QSV++I   LA+L       +  +++ K  R   L P ++FW W+ F  Y       SA+ A+V+T +     + E LG+ AV FEA++ LPQ+++NF  +ST  +S+ MV  W  GD  K +YF+    P+ F     VQ  +D  + L
Sbjct:   46 TEGFSTRVCLVLLIANILRIFFWIGKQFELTLLLQSVVMILTMLAMLHLCCSVQNTNSVSTKRHRLSDLDP-KYFWKWNVFEDYLLFCFGLSALCAMVTTLLLDSAVFVEMLGSLAVMFEAMLGLPQLLQNFHNRSTKGMSVKMVLLWTAGDIFKTSYFVMNQSPSQFSACGSVQILIDVAILL 228

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BLAST of jgi.p|Trimin1|147637 vs. uniprot
Match: A0A3B3RIW4_9TELE (Si:dkey-246g23.2 n=3 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3RIW4_9TELE)

HSP 1 Score: 119 bits (298), Expect = 1.000e-29
Identity = 70/184 (38.04%), Postives = 105/184 (57.07%), Query Frame = 1

Query:    1 TQGFSSKVSLVLLLANTLRVAFWFQKRFDNTLLIQSVLLIGMQLALLQALAGSKQALARKEGRQLQLSPV--RHFWAWDSFGLYFGVTVLFSAVLALVSTYMYRFEWYTEGLGATAVSFEAVMSLPQMMRNFAQKSTAWLSLFMVCGWLGGDFLKIAYFLAKGVPAVFFYGAFVQTALDATVAL 546
            T+GFS++V LVLL+AN LR+ FW  K+F+ TLL+QSV++I   LA+LQ L  + Q   R   +Q   + +  R+FW+W  F  Y     +F    A V+        + E LG+ A+ FEA++ LPQ+++NF  +ST  +S+ MV  W+ GD  K  YF+    P  F+    VQ  +D  + L
Sbjct:   79 TEGFSTRVCLVLLIANILRIFFWIGKQFELTLLMQSVVMIATMLAMLQ-LCCNVQGTNRVATKQHHFTDLDLRYFWSWSRFEDYLLFCFVFMVFCAFVTFLFLDSTLFVESLGSLALLFEAMLGLPQLLQNFQNRSTRGMSVKMVLLWMAGDIFKTTYFIMNESPVQFWVCGLVQILVDVAILL 261

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BLAST of jgi.p|Trimin1|147637 vs. uniprot
Match: A0A1I8CN13_9BILA (Uncharacterized protein n=1 Tax=Rhabditophanes sp. KR3021 TaxID=114890 RepID=A0A1I8CN13_9BILA)

HSP 1 Score: 119 bits (298), Expect = 2.050e-29
Identity = 68/184 (36.96%), Postives = 99/184 (53.80%), Query Frame = 1

Query:    1 TQGFSSKVSLVLLLANTLRVAFWFQKRFDNTLLIQSVLLIGMQLALLQALAGSKQALARKEGRQLQLSP--VRHFWAWDSFGLYFGVTVLFSAVLALVSTYMYRFEWYTEGLGATAVSFEAVMSLPQMMRNFAQKSTAWLSLFMVCGWLGGDFLKIAYFLAKGVPAVFFYGAFVQTALDATVAL 546
            + GFS  V L L++AN LR+ FWF   ++  LLIQS +++     +L+     K+   +K  R        +  FW W     YF    +FSA  +L++    ++ WY +GLG  A+  EA + +PQ+ RNF +KSTA +SL MV GWLGGD  K  YF  K  P  F    F+Q ++D  + L
Sbjct:   85 SSGFSLYVCLALIVANVLRILFWFGNHYETPLLIQSSVMLMAMFVMLEISVRMKRHNTQKSLRTSIWKGHFMTDFWQWTDLPSYFVALAMFSAGASLLTAIFIQYNWYVDGLGLVALLTEACLGVPQLFRNFQRKSTAGMSLPMVLGWLGGDIGKTIYFYVKDSPFQFKVCGFLQISIDILILL 268

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|147637 vs. uniprot

BLAST of jgi.p|Trimin1|147637 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YPT7_9STRA	4.330e-123	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A835YRA4_9STRA	1.810e-73	77.48	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A3P8YDT6_ESOLU	3.720e-32	40.11	PQ-loop repeat-containing protein 1 n=2 Tax=Esox l...	[more]
A0A087Y238_POEFO	2.290e-31	39.67	PQ-loop repeat-containing protein 1-like n=8 Tax=P...	[more]
A0A662YS23_ACIRT	4.890e-31	39.13	PQ-loop repeat-containing protein 1 n=4 Tax=Acipen...	[more]
A0A4U5PDP6_STECR	1.290e-30	39.56	Uncharacterized protein n=2 Tax=Steinernema carpoc...	[more]
UPI001403DF0C	3.480e-30	40.78	solute carrier family 66 member 2-like n=1 Tax=Amb...	[more]
A0A3Q3D774_HIPCM	9.520e-30	38.59	PQ-loop repeat-containing protein 1-like n=2 Tax=H...	[more]
A0A3B3RIW4_9TELE	1.000e-29	38.04	Si:dkey-246g23.2 n=3 Tax=Paramormyrops kingsleyae ...	[more]
A0A1I8CN13_9BILA	2.050e-29	36.96	Uncharacterized protein n=1 Tax=Rhabditophanes sp....	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_54	contig	Contig_54:446720..452029 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|147637\|gw1.54.141.1
Description	Si dkey-246g23.2
COG category	S
Max annot lvl	33208\|Metazoa
EggNOG OGs	KOG2913@1\|root,KOG2913@2759\|Eukaryota,38ERJ@33154\|Opisthokonta,3BBE8@33208\|Metazoa,3CSP8@33213\|Bilateria,489YP@7711\|Chordata,4990W@7742\|Vertebrata,49X6W@7898\|Actinopterygii
Evalue	6.1e-33
Seed ortholog	8010.XP_010882458.1
Hectar predicted targeting category	signal anchor
TranscriptId	147959
Track	FilteredModels1
ProteinId	147637

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|147637	gene_7065	Tribonema minus UTEX_B_3156	gene	Contig_54 446720..452029 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_7065_1	exon_7065_1	Tribonema minus UTEX_B_3156	exon	Contig_54 446720..447031 +
exon_7065_2	exon_7065_2	Tribonema minus UTEX_B_3156	exon	Contig_54 449419..449565 +
exon_7065_3	exon_7065_3	Tribonema minus UTEX_B_3156	exon	Contig_54 451943..452029 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_7065	CDS_7065	Tribonema minus UTEX_B_3156	CDS	Contig_54 446720..447031 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|147637	Trimin1\|147637\|gw1.54.141.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_54 446720..452029 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_54:446720..452029+
coding sequence from alignment at Contig_54:446720..452029+

spliced messenger RNA

>mRNA_7065 ID=mRNA_7065|Name=jgi.p|Trimin1|147637|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=546bp|location=Sequence derived from alignment at Contig_54:446720..452029+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ACACAGGGTTTCAGCTCCAAGGTCTCGCTGGTGCTGCTGCTCGCCAACAC
CCTCCGCGTGGCCTTCTGGTTCCAAAAACGCTTCGACAACACCCTGCTGA
TCCAGAGCGTGCTGCTGATAGGCATGCAGCTGGCGCTACTTCAGGCGCTG
GCGGGGAGCAAACAGGCACTGGCTAGGAAGGAGGGGAGGCAGCTGCAGCT
GTCGCCCGTGCGGCACTTTTGGGCGTGGGACAGTTTTGGACTTTACTTTG
GGGTCACAGTGCTGTTTTCAGCGGTGCTGGCGCTGGTGTCGACGTACATG
TACCGCTTTGAGTGGTACACCGAGGGCCTGGGAGCCACGGCGGTTTCCTT
TGAAGCCGTCATGTCGCTGCCGCAGATGATGCGGAACTTTGCGCAGAAGA
GCACGGCGTGGCTGAGCTTGTTCATGGTGTGCGGCTGGCTGGGCGGCGAC
TTCCTCAAGATCGCCTACTTTTTGGCCAAGGGCGTGCCAGCCGTCTTCTT
CTACGGTGCCTTCGTCCAGACGGCACTGGATGCCACAGTCGCCCTG

protein sequence of jgi.p|Trimin1|147637

>Trimin1|147637|gw1.54.141.1 ID=Trimin1|147637|gw1.54.141.1|Name=jgi.p|Trimin1|147637|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=182bp
TQGFSSKVSLVLLLANTLRVAFWFQKRFDNTLLIQSVLLIGMQLALLQAL
AGSKQALARKEGRQLQLSPVRHFWAWDSFGLYFGVTVLFSAVLALVSTYM
YRFEWYTEGLGATAVSFEAVMSLPQMMRNFAQKSTAWLSLFMVCGWLGGD
FLKIAYFLAKGVPAVFFYGAFVQTALDATVAL

mRNA from alignment at Contig_54:446720..452029+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_7065 ID=mRNA_7065|Name=jgi.p|Trimin1|147637|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5310bp|location=Sequence derived from alignment at Contig_54:446720..452029+ (Tribonema minus UTEX_B_3156 )
ACACAGGGTTTCAGCTCCAAGGTCTCGCTGGTGCTGCTGCTCGCCAACAC
CCTCCGCGTGGCCTTCTGGTTCCAAAAACGCTTCGACAACACCCTGCTGA
TCCAGAGCGTGCTGCTGATAGGCATGCAGCTGGCGCTACTTCAGGCGCTG
GCGGGGAGCAAACAGGCACTGGCTAGGAAGGAGGGGAGGCAGCTGCAGCT
GTCGCCCGTGCGGCACTTTTGGGCGTGGGACAGTTTTGGACTTTACTTTG
GGGTCACAGTGCTGTTTTCAGCGGTGCTGGCGCTGGTGTCGACGTACATG
TACCGCTTTGAGGTCAGCCCCCGTGTGTCATCTTGTTCCTGCTCAAAAGG
CGCCGAATTGTAGCGGGTGTGCCGCGAAGCAGTGCAAGCTTGTGCTCTTG
CATGTGCACCAAAGGTGCAGCAGGGTATCATGCCTGATTTAAGACTGGAG
TGCACAGCTACAGCAAGGTGACCAAAATGGATTGTACCCTCTGGCATGTT
GTTACCACACATCGCTGACGTCGGTAAGAAACGATGCAGAATCATCACAT
GCTGTAAGGTGTGTATTTCATATGGCTGTTGGTCTGTGCTCGTCTGCGGC
GGGTGCGCTGTCTGCATGTGCACCGCAGCTATCACAGATTATCATGACGG
GCATTGTGGAGTGCGATGACACGCAAGGTGTCTTGTATGGCTGAAGGTTT
ATCCTTGAGGTGGGAGTGCTGTTTGTAAGGCAGTGCTGACGCTGGTGTCG
TCATCCATGTACTGCTTTGAGGTCAGTGCTTTATGTGTCCATGCGTTTCG
GGCACGCTCGCAAACGTTGCATAGACAAGACAGAAAACAGTTTGAAGAAT
CTGCACTGTTGGGATTCGTAGGTGGGAGACTATTATAAGTACAGGAAAGC
CAGGATAAAGTAGTGTCAGCCCTGTGCTCATGAGGCAAGCACCACCACGA
GGATGCAGCAGCAGCAGCAATACTGAAGTCTCAATCATGATGCTGATGTA
AAATATGACTTGATTGTTTGTTCAAAAGAAGCAGCAGCGGTTTGGGTACA
GCCATGCTGCTCCTGCTGCTGAGCAAACCACAGCCGCTGTGTATGGCTTC
GACCTACAAAAAATGCGTGCTCCACAGGGCCTGGAAGCCACGGCCGTGGC
ATTGCGTGATTCATCTTGAGCTGTTGGTAGATGACAAACACGGTAGCAGC
AGCAGCAGCAGCACCACGGCTGGTTGCATATGTCGCTTATAGCTTACAAG
GTGTTCATGCTCACGGTGGCATGTCTCTGCATCCACCCCTTGCTTTCACG
CACTCAAAGTTGATCATCATTACACCACTCACAAGCGCTGTCCATTGCTG
TTGCGGCCACAGTGCTAGGCTGATGCGCTGGACTGTTGAGCAACTTTCAA
ACAGCAGCGGCTGAAGCAGTCTTCACTTGAAGTTGAAACACGACTCTGTA
ACTGTTGTACAATACGCTCTTCCAAATCTCACTTCAGCAAGGAAGCTCTC
CTGTCAAGTCTTGACCTGTTCATCGTCATGTCAACTCAATATGTGATGGC
AGTGCACGTCGGGACAGCCAGCCAATGATCACCTGAGTCTTGCGGCACTC
ACCCAAGCATCTGCAGCACTCAACCAAGAGTCGCGTCCTCAAAAGCGTTG
GGAGTATATATACATTTATAGTCGGATCAGCCCCGACGGGCCATGCAAAG
CACTGTACTTGCGCTCATGTGCTGATGCCGCCTCTCTCAGGGCGGCGATA
CTCAAACGCGCAAGTGCCTCATTTTAAGACGGGTACACATGATGCGTTCC
AGAAGCAGGCGCTGCGGCGCACTTGAAGCTTACACACCTCTATTGTCGAG
TGATGATCTGTCCACTGCAGTGGTATCCAGAGGGCCTTTGGAGTCACGGC
AACTTCGTACACCCATCATGGTGATGATCACACTGTGCAATTTCAGCTGC
ATGTGCAAGGCACATTCACAAATCACCATCATCTGCGCAATATGGCACTG
AAGCGAGTACTCATTATGTTGCTTGCATGTCTTGCACACCTTCCACATTG
ACAGGACATGTGCCTGCTTGCTGCAAAGGTCTGCGTTGGCTCTGGAGCCT
TGGCATTTTCGTTTGAAGCCGCCACGTTCATCCATGAAAGAACTCCGCAT
CTGTGCTTGCTCATTGTTTGCATCTCACCTCTCATGCTGCAGCGGTACAC
AGACGGCCTTGGAGCCATGGCGGTTTCATCTGAGGCCGTCCTGTCGCTGC
CATATGCAACTTCAGCAAAGAAGTAACATACACACTGGTTGCTTGTTGCG
CATTTGAGTGTTTTCTCCCACGTTGACTGATCACGTGTATGCTGCAGTGG
TACACAAAAGGTTTTGGAGATGTTTCAATCAACTTCGTTCACAGCTATTT
GTTCAGCTACGAAAGACCTATGTACGCGTTTTGTTGCCTGCTCGAGGTCT
GCATCTCACCTCTCATGCTGTCCGATCACCTGTCTACTGCAGCGGTACAC
GGAGGGCCTTGGAGCCACTGCGGCTTGTTTGAATCTGCCATACTGTCCAT
GTGCAACTTTGGCCATGCAAGTCATTTGTTTATCGTCATACTGCACAACT
TCAGACATGCAAACACTGCGCCATGCAGTAACGTGCGCGTTCATTGCCTG
ATCAGCATCCGAACCTCACCTCTCATCCACTGATCATCTGTCGCTGCAGT
GGTACACCGAGGGCCTGGGAGCCACGGCGGTTTCCTTTGAAGCCGTCATG
TCGCTGCCGCAGATGATGCGGAACTTTGCGCAGAAGAGCACGGCGTGGCT
GAGCTTGTTCATGGTGTGCGGCTGGCTGGGCGGCGACTTCCTCAAGGTGA
CGCTCTCAAACTCCAAAATGTCAGGCATCGCTGCACTTCAAGCGTGCGTC
CCTTTGCAGTTTCAGACTCACCTAGGGAGCCTGACTTTCACACTTCGTTT
GGAGCGTTTTTTCCACTGTTTTCTGTGCGACTGGCTCGGTGGCGATACCT
CAAGGTGACGCTCACCAACTGCAACAGTCCGGCACTCGACGCACTTGAAG
AGTTGGTCTCGTTGTAGCTTGTAACTCAAGTTGAGTGCTTGACCTTCAGA
GTTCGTTTGGCGCGTCCTGCTCCTGAGTTCTATGTGGCTGGCTGAGCGAT
CTCAAGCTGACGCCCTTAAACTTCAACACGTCAAGCATCTGATGCACGTA
GAAGGTGCGTCCCATTGCAGTCTTACCTTGTGAGCCTGACTTTGGCAGTG
CATTTGGCGCGTGTTTTCATTACTTACTGTGCGTCTGGCTGGGCGGCAAC
TTCCCCAAGTGTCACGCGTAAACTTAAACAGTTTCAGGCACTAAGAGAGT
TTGTTGCGTTACAGTTTGTGGCTCTCATCGTGAGCCTGATCTTGACAGTT
CATTTAGCGTGGGCTTTCATTGAATTCTGTGCAATTGGCTGGGCGGCGAC
TTGCCGCACACAAACTTTCACACTGTACACAAACTTCAGCATTCCAGGTT
GTCGCTCACACTTGAGCCTGCCCCTGAAAGCACATTGCCACCATGGCTGT
TCTCACTACCTACGCAAATGCTCAAGCCTGGCATCGCTGCAAAACGGCCC
GTATTCGCTGCGTCGCAGCATGTTCACTGTGTGTACAGCGACATGCTCAT
CGCTGTGCTGGATGATGCTTGCTCGTCAGGTTGCCACTTCAACTGCTTCG
CAGTTGAGGGTGAAGCAGTCGAGGGCGTGGCTATCGTTATCAACTTTGTG
GCCTTATTTTGCGATGGCCTTGAGCCATACGAAGGCGCTGCTTCAATCAA
CTGAACTTCAGCAACACTGGCTGCTGGACCTCTTGTGTTGGGCTGCCAGC
TGGAGCTGGTCCACCGAACGCGTGAGAGCTTTCCATACTGAACACCCATG
CCTCGACGCTTTAAAAAGCTTGCACACAGAAAGTCCATTTCTGTGGACAC
TGTGACACTGTTTGATCGTGGCCTATTGCCGCAACACCGGCGACCACGGT
CATTGGTGCAAGGCAATGACGGCTACCCACCCCATGTTTACCCAGAGCTC
TACGACTTTTTGATTCGTTTCCACTAGCCTCATGCACGGAAGAATATAAC
AAGCGCCGCTGCTTGCCCGCACGCACACACACGCACACACACATGCCCTC
ACCACGCATTCCAAACTGTTCAGTACCCCTCTATCCTACAGGCCTCTGCG
TCATCATGGTTGAGTATTGTATCAGCAGCGCTCTTACATGCCGCAACACC
CCCCGCCACTGAATCAGATGTCATATCTACGCGACCGCAGCGTGCGCTGC
TGACTGGCAAGGAACTTCATGTCCCTTGCTCTGTATTCTACAGCATACCA
CCATGCTCACCAATTGGGTTGCATGCGTCGCCCACTCAAAAAGTCAATGT
GATGTCAAGGACCTGCTAGCAGCTCGGACAGTTGCCCGTGGCAGAAGTGT
GCAGCTGCCAGCATTCAATCTACGCTGACACGAGCTCAAGAAATTAGGCT
GCTTGCTTGTTGCAGTGGACAGGGGTACTTCAACAACAACAAGATGGCTC
GGCAGTGACCGTGCTCACGTCTTTCTTCTTGCTTGGATCGCCATCACCAG
ATTCTCATGGCCTTTTTGCTTGAATGACCAGTAACGACACAGTCATGTGG
CTGTCTGCATCCGCTCGAACACTACAGTAGCTCGTCCATGTCCGCGTGCA
GCTTGCTTTGCACAGGCGATGACTGCATGATCGGTGGCGTCCCAGCAGCG
TGCTTTCATGGTGCTTGCACTTTTGCACAGGCCGGAATTGACACAATTCT
GCTGCTGCTGCAGCCTTTCGTCAAGTCATCGGGTCAGCTCACAACTCTGC
TGCTCATTGCTGCGCGCCGCAGATCGCCTGCTTGCGAGCCTTTAAGCTTG
TCAGCAGTCATCAATCAGCATACTCATGCTGCCGCAGCATGCTGCCGCAG
CATTCATGAGGTAATAGCATTACTTCACGCTGCCGCCACTGATTGTTGCA
CACCGCAGATCGCCTACTTCCTGGCCAAGGGCGTGCCAAACGCCTTCTTC
TACGGCGCCTTTGTCCAGACAGCACTGAACGCCAAACGCTCCTGACTTGA
CGATCAAATTGTTGCTGCAATCATCGTGCTGCGGCATCAGCTCACCACAT
CAGGTCACGACTCTGTTTCATGAGGCGGCTACATCAGCTTGCGGCTTTTC
CGCTCGTTTTTCGCACGCCGCAGATCGCCTACTTTTTGGCCAAGGGCGTG
CCAGCCGTCTTCTTCTACGGTGCCTTCGTCCAGACGGCACTGGATGCCAC
AGTCGCCCTG

Coding sequence (CDS) from alignment at Contig_54:446720..452029+

>mRNA_7065 ID=mRNA_7065|Name=jgi.p|Trimin1|147637|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=546bp|location=Sequence derived from alignment at Contig_54:446720..452029+ (Tribonema minus UTEX_B_3156 )
ACACAGGGTTTCAGCTCCAAGGTCTCGCTGGTGCTGCTGCTCGCCAACAC
CCTCCGCGTGGCCTTCTGGTTCCAAAAACGCTTCGACAACACCCTGCTGA
TCCAGAGCGTGCTGCTGATAGGCATGCAGCTGGCGCTACTTCAGGCGCTG
GCGGGGAGCAAACAGGCACTGGCTAGGAAGGAGGGGAGGCAGCTGCAGCT
GTCGCCCGTGCGGCACTTTTGGGCGTGGGACAGTTTTGGACTTTACTTTG
GGGTCACAGTGCTGTTTTCAGCGGTGCTGGCGCTGGTGTCGACGTACATG
TACCGCTTTGAGTGGTACACCGAGGGCCTGGGAGCCACGGCGGTTTCCTT
TGAAGCCGTCATGTCGCTGCCGCAGATGATGCGGAACTTTGCGCAGAAGA
GCACGGCGTGGCTGAGCTTGTTCATGGTGTGCGGCTGGCTGGGCGGCGAC
TTCCTCAAGATCGCCTACTTTTTGGCCAAGGGCGTGCCAGCCGTCTTCTT
CTACGGTGCCTTCGTCCAGACGGCACTGGATGCCACAGTCGCCCTG