mRNA_6979 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|146327 vs. uniprot
Match: A0A835Z180_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z180_9STRA) HSP 1 Score: 542 bits (1397), Expect = 3.490e-195 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 1 Query: 1 VHRGNWVLGSQIGRGAFGQVHMGHNQVTGELIAVRRLCLVSDEKRAATSQLINEIQLMQRCHHPNIVGYLGAELHTSWVCILQEWVAGGSITSMLASFGAFPQPVTHCYARQLLQGVMYLHSCGIVHRDLKGDNVLISASGVVKIADFGTSKQLFDLQDNSAQLQGTPYFMAPEVLQRQPHGMAVDIWAFACVVLQMLTGDMPWSLALGTQKTVTQLLQIMQSERIPPLPPDLDLSLRMALVACFSWDSVGRPTAKSLLHSGYFS 795 VHRGNWVLGSQIGRGAFGQVHMGHNQVTGELIAVRRLCLVSDEKRAATSQLINEIQLMQRCHHPNIVGYLGAELHTSWVCILQEWVAGGSITSMLASFGAFPQPVTHCYARQLLQGVMYLHSCGIVHRDLKGDNVLISASGVVKIADFGTSKQLFDLQDNSAQLQGTPYFMAPEVLQRQPHGMAVDIWAFACVVLQMLTGDMPWSLALGTQKTVTQLLQIMQSERIPPLPPDLDLSLRMALVACFSWDSVGRPTAKSLLHSGYFS Sbjct: 1 VHRGNWVLGSQIGRGAFGQVHMGHNQVTGELIAVRRLCLVSDEKRAATSQLINEIQLMQRCHHPNIVGYLGAELHTSWVCILQEWVAGGSITSMLASFGAFPQPVTHCYARQLLQGVMYLHSCGIVHRDLKGDNVLISASGVVKIADFGTSKQLFDLQDNSAQLQGTPYFMAPEVLQRQPHGMAVDIWAFACVVLQMLTGDMPWSLALGTQKTVTQLLQIMQSERIPPLPPDLDLSLRMALVACFSWDSVGRPTAKSLLHSGYFS 265
BLAST of jgi.p|Trimin1|146327 vs. uniprot
Match: A0A836CHV3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHV3_9STRA) HSP 1 Score: 384 bits (985), Expect = 2.560e-132 Identity = 190/271 (70.11%), Postives = 208/271 (76.75%), Query Frame = 1 Query: 1 VHRGNWVLGSQIGRGAFGQVHMGHNQVTGELIAVRRLCLVSDEKRAATSQLINEIQLMQRCHHPNIVGYLGAELHTSWVCILQEWVAGGSITSMLASFGAFPQPVTHCYARQLLQGVMYLHSCGIVHRDLKG------DNVLISASGVVKIADFGTSKQLFDLQDNSAQLQGTPYFMAPEVLQRQPHGMAVDIWAFACVVLQMLTGDMPWSLALGTQKTVTQLLQIMQSERIPPLPPDLDLSLRMALVACFSWDSVGRPTAKSLLHSGYFS 795 V RG W LG I RGAFGQVHMG NQ+TGELIAV+ CL S +QL NE+ LMQRC HPNIVGYLGAELH SWVCILQEWV GGSI S+L +FG F + VT CYA Q+LQG+MYLHSCGIVH DLKG DNVL+S SGVVKIADFGTS+Q+FDLQD +L GTPYFMAPEVLQRQ HGMAVD+WAFACV+LQMLTGD PW LGT K V LLQ MQ+ R PPLPPD+ S+R LV CFSWD GRPTAK LL S YFS Sbjct: 1 VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKA-CLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTHRTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFS 270
BLAST of jgi.p|Trimin1|146327 vs. uniprot
Match: A0A835YJU3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU3_9STRA) HSP 1 Score: 360 bits (924), Expect = 3.210e-123 Identity = 172/258 (66.67%), Postives = 211/258 (81.78%), Query Frame = 1 Query: 16 WVLGSQIGRGAFGQVHMGHNQVTGELIAVRRLCLVSDEKRAATSQLINEIQLMQRCHHPNIVGYLGAELHTSWVCILQEWVAGGSITSMLASFGAFPQPVTHCYARQLLQGVMYLHSCGIVHRDLKGDNVLISASGVVKIADFGTSKQLFDLQDNSAQLQGTPYFMAPEVLQRQPHGMAVDIWAFACVVLQMLTGDMPWSLALGTQKTVTQLLQIMQSERIPPLPPDLDLSLRMALVACFSWDSVGRPTAKSLLHSGY 789 W LG ++GRGAFGQVHMG +QVTGE IAV+ CL+S + + S+L NEI+LMQRC H NIV YLG EL + V I+QEWV GGSITS+L++FGAF QPVT CYARQ+L G++YLHSCG VHRDLKGDNVL+SA G+VKIADFGTS+QL+DLQD+ LQGT +FMAPEVLQRQP GMAVD+WAFAC+VLQM TG+MPW+ LG +K + +LL++MQ+ R+PPLP DL+ ++R AL ACFSW+ RPTAK L+H GY Sbjct: 3 WALGPELGRGAFGQVHMGLDQVTGEFIAVKA-CLISGGRSSTASKLSNEIRLMQRCRHVNIVQYLGTELSPAGVYIVQEWVPGGSITSILSNFGAFTQPVTQCYARQILHGLVYLHSCGTVHRDLKGDNVLVSAGGIVKIADFGTSEQLYDLQDDRGHLQGTLHFMAPEVLQRQPQGMAVDVWAFACLVLQMHTGNMPWASELGARKRLPRLLRLMQAHRMPPLPNDLNPTMRAALTACFSWNPAERPTAKHLVHHGY 259
BLAST of jgi.p|Trimin1|146327 vs. uniprot
Match: A0A835YKW2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKW2_9STRA) HSP 1 Score: 251 bits (640), Expect = 2.110e-78 Identity = 134/268 (50.00%), Postives = 174/268 (64.93%), Query Frame = 1 Query: 16 WVLGSQIGRGAFGQVHMGHNQVTGELIAVR----RLCLVSDEKR------AATSQLINEIQLMQRCHHPNIVGYLGAELHTSWVCILQEWVAGGSITSMLASFGAFPQPVTHCYARQLLQGVMYLHSCGIVHRDLKGDNVLISASGVVKIADFGTSKQLFDLQDNSAQLQGTPYFMAPEVLQRQPHGMAVDIWAFACVVLQMLTGDMPWSLALGTQKTVTQLLQIMQS--ERIPPLPPDLDLSLRMALVACFSWDSVGRPTAKSLLHS 783 W LG IGRG+FG+VHMG NQ+TGEL+A++ LC+ ++ A L E+ +M + H N V YLGAE V I Q+W+ GGSI+++LA FG + VT YARQ L+G+ YLH+ GIVHRDLKGDN+LI G +KIADFGTS ++ D +A++ GTPYFMAPE+L R HG+ VDIW FAC VLQMLT PW T ++ LL +MQ+ +R+PPLPPD+ +R LV CF WD RPT++ LL S Sbjct: 2 WCLGPTIGRGSFGEVHMGLNQITGELMAIKVCALPLCVAHSLRQPGAHACAKQHSLPREVFIMSQLQHRNTVRYLGAESDDDKVYIFQQWIPGGSISALLARFGPLSEHVTRLYARQALRGLAYLHANGIVHRDLKGDNLLIDGEGTIKIADFGTSARVPD-GAAAAEMLGTPYFMAPEMLLRCDHGLPVDIWGFACTVLQMLTNRRPWHSCRVT--SLPALLSVMQAALQRMPPLPPDMSPVMRAVLVNCFRWDPAERPTSRQLLRS 266
BLAST of jgi.p|Trimin1|146327 vs. uniprot
Match: A0A835YLS7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS7_9STRA) HSP 1 Score: 242 bits (617), Expect = 1.860e-76 Identity = 131/270 (48.52%), Postives = 169/270 (62.59%), Query Frame = 1 Query: 1 VHRGNWVLGSQIGRGAFGQVHMGHNQVTGELIAVRRLCLVSDEKRAATSQLINEIQLMQRCHHPNIVGYLGAELHTSW--VCILQEWVAGGSITSMLASFGAFPQPVTHCYARQLLQGVMYLHSCGIVHRDLKGDNVLISASGVVKIADFGTSKQLFDLQDNSAQ--LQGTPYFMAPEVLQRQPHGMAVDIWAFACVVLQMLTGDMPW-SLALGTQKTVTQLLQIMQSERIPPLPPDLDLSLRMALVACFSWDSVGRPTAKSLLHSGYFS 795 V G W LG++I RG+FG V+MG N+ TG L+AV+ L L ++ +L E+ LM+ HPNIV YLGAE+ +CI QEWV GGS++S+L FG F + +T Y RQ LQG+ YLHS +VHRD+ G N+L+ GVVK+ADFG S QL D + A L+GTPYFMAPEVLQR HGM VD+W+F VLQM++G+ PW S + T + Q L + + + PPLP DL LR L CF WD RPTA L + S Sbjct: 2 VQPGKWKLGNRIARGSFGVVYMGLNEATGALMAVKVLSLRGSDRDL--HELHREMALMRAFSHPNIVSYLGAEIREEHDQLCIFQEWVPGGSVSSLLQRFGPFSEDMTRGYTRQALQGLAYLHSHHVVHRDINGSNILVDDHGVVKLADFGASLQLSDAAGSRADGALKGTPYFMAPEVLQRSAHGMPVDVWSFGGAVLQMVSGEPPWFSYGVSTPYALLQAL-LERRGQTPPLPADLSAGLRAFLERCFRWDPAERPTAAELALDPFLS 268
BLAST of jgi.p|Trimin1|146327 vs. uniprot
Match: A0A835YTJ7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTJ7_9STRA) HSP 1 Score: 237 bits (605), Expect = 2.080e-74 Identity = 126/261 (48.28%), Postives = 166/261 (63.60%), Query Frame = 1 Query: 16 WVLGSQIGRGAFGQVHMGHNQVTGELIAVRRLCLVSDEKRAATSQLINEIQLMQRCHHPNIVGYLGAELHTSWVCILQEWVAGGSITSMLASFGAFPQPVTHCYARQLLQGVMYLHSCGIVHRDLKGDNVLISASGVVKIADFGTSKQLFDLQDNSAQLQGTPYFMAPEVLQRQPHGMAVDIWAFACVVLQMLTGDMPW-SLALGTQKTVTQLLQIMQSERIPPLPPDLDLSLRMALVACFSWDSVGRPTAKSLLHSGYFS 795 W LG +IG G+FG VH G +QVTG+LIAV Q++ E+ +M+R H NIV YLGAELH S + I ++++AGGS+ ++L +FGA V Y Q+L+G+ YLHSCG+VHRDLK NVLI G +I+DFGTS +L +S + GTP FMAPEVLQR GM VDIW F C ++QM+TG PW L L T + L + R+PPLPP LD +L + LV+CF W+ RPT++ LL S +FS Sbjct: 2 WRLGPRIGAGSFGVVHQGLDQVTGQLIAV-------SSHFNGQRQVLQEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTS--CINLDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEG-RMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFS 252
BLAST of jgi.p|Trimin1|146327 vs. uniprot
Match: A0A835YLD7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD7_9STRA) HSP 1 Score: 238 bits (606), Expect = 1.060e-73 Identity = 128/262 (48.85%), Postives = 169/262 (64.50%), Query Frame = 1 Query: 1 VHRGNWVLGSQIGRGAFGQVHMGHNQVTGELIAVRRLCLVSDEKRAATSQLINEIQLMQRCHHPNIVGYLGAELHTS--WVCILQEWVAGGSITSMLASFGAFPQPVTHCYARQLLQGVMYLHSCGIVHRDLKGDNVLISASGVVKIADFGTSKQLFDLQD-NSAQLQGTPYFMAPEVLQRQPHGMAVDIWAFACVVLQMLTGDMPW-SLALGTQKTVTQLLQIMQSERIPPLPPDLDLSLRMALVACFSWDSVGRPTAKSL 774 V G W LG++I RG+FG V+MG N+VTGEL+AV+ L L E+ +L E+ LM++ HPNIV YLGAE+ +CI QEWV GGS++S+L FG F + +T Y RQ L+G+ YLH +VHRD+KG N+L+ G VK+ADFG S + D D L+GTPYFMAPEVLQR+PHG VDIW+F +LQM+TG+ PW S + T + Q + + + + PPLP +L SL L CFSWD RP+A L Sbjct: 86 VRPGKWKLGNRIARGSFGVVYMGLNEVTGELMAVKVLSLHGSERDMR--ELHREMALMRQFSHPNIVSYLGAEIREEDGQLCIFQEWVPGGSVSSLLRRFGPFSEDMTRRYTRQALRGLTYLHQHQVVHRDIKGSNILVDDRGTVKLADFGASICVSDPADAGGGALKGTPYFMAPEVLQRKPHGPLVDIWSFGGAILQMVTGEPPWYSAGVSTPYALLQTM-LERKGQPPPLPANLSPSLAAMLRRCFSWDPALRPSAAQL 344
BLAST of jgi.p|Trimin1|146327 vs. uniprot
Match: A0A835ZBQ2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBQ2_9STRA) HSP 1 Score: 226 bits (575), Expect = 2.450e-68 Identity = 119/212 (56.13%), Postives = 132/212 (62.26%), Query Frame = 1 Query: 1 VHRGNWVLGSQIGRGAFGQVHMGHNQVTGELIAVRRLCLVSDEKRAATSQLINEIQLMQRCHHPNIVGYLGAELHTSWVCILQEWVAGGSITSMLASFGAFPQPVTHCYARQLLQGVMYLHSCGIVHRDLKGDNVLISASGVVKIADFGTSKQLFDLQDNSAQLQGTPYFMAPEVLQRQPHGMAVDIWAFACVVLQMLTGDMPWSLALGTQK 636 V G W LG IGRGAFGQVHMG +Q+TGELIA EWV GGSI S+L +FG F + +T CYA Q+LQG+MYLHSCGIVH DLKGDNVL+S SGVVKIADFGTS+Q FDLQD +L GTPYFMAPEVLQRQ H MAVD+ AFACV+LQMLTGD PW LGT K Sbjct: 185 VQPGKWKLGPCIGRGAFGQVHMGLDQMTGELIA--------------------------------------------------EWVPGGSICSILQNFGPFTERITRCYAHQILQGIMYLHSCGIVHHDLKGDNVLVSTSGVVKIADFGTSEQAFDLQDRQTKLMGTPYFMAPEVLQRQRHNMAVDVLAFACVILQMLTGDAPWRSLLGTNK 346
BLAST of jgi.p|Trimin1|146327 vs. uniprot
Match: A0A836C8F1_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8F1_9STRA) HSP 1 Score: 218 bits (555), Expect = 1.750e-66 Identity = 126/288 (43.75%), Postives = 166/288 (57.64%), Query Frame = 1 Query: 10 GNWVLGSQIGRGAFG-QVHMGHNQVTGELIAVRRLCLVSDEKRAATSQ--------LINEIQLMQRCHHPNIVGYLGAELHTSWVCILQEWVAGGSITSMLASFGAFPQPVTHCYARQLLQGVMYLHSCGIVHRDLKGDNVLISASGVVKIADFGTSKQLFD---LQDNSAQL-------------QGTPYFMAPEVLQRQPHGMAVDIWAFACVVLQMLTGDMPWSLALGTQKTVTQLLQIMQSE--RIPPLPPDLDLSLRMALVACFSWDSVGRPTAKSLLHSGYF 792 G W + I RG+FG VH+ +Q G+L AV+ + L+ ++ L +E LM++ HHPNIVG+L E+ + +CI QE V GGS+ ++L FGA P+ + CYARQ L G+ YLH C I HRDLK N+L+ A V+K+ADFGTS L D L +S L GTPYFMAPE+LQRQ HG+AVD W F +LQM++G PWS A G K+ LL+ M++ PPLPP LR L ACF WD+ RPTA+ L +F Sbjct: 17 GRWKISECIARGSFGGSVHIALDQRNGQLAAVKLVPLLLRQRSDRDGXXXXXXXRALFHEAALMRQLHHPNIVGFLSVEIRNAHMCIFQELVPGGSVAALLQRFGALPEAMARCYARQALAGIEYLHKCRIAHRDLKASNMLVDAHSVLKLADFGTSVLLPDSSSLDSHSVSLTARTCAIPASGAVHGTPYFMAPEMLQRQAHGLAVDTWGFGGALLQMVSGAPPWSGA-GV-KSPAALLRHMRARDGAPPPLPPRASPPLRALLRACFRWDAAARPTAQQLRRHEFF 302
BLAST of jgi.p|Trimin1|146327 vs. uniprot
Match: A0A7S3UV54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV54_HETAK) HSP 1 Score: 213 bits (542), Expect = 1.780e-62 Identity = 117/275 (42.55%), Postives = 169/275 (61.45%), Query Frame = 1 Query: 1 VHRGNWVLGSQIGRGAFGQVHMGHNQVTGELIAVRRLCLVSDEKRAATSQLINEIQLMQRCHHPNIVGYLGAELHTSW--VCILQEWVAGGSITSMLASFGAFPQPVTHCYARQLLQGVMYLHSCGIVHRDLKGDNVLISASGVVKIADFGTSKQLFDLQDNSAQ-------LQGTPYFMAPEVLQRQPHGMAVDIWAFACVVLQMLTGDMPWSLALGTQKTVTQLLQIMQSERIPP-LPPDLDLSLRMALVACFSWDSVGRPTAKSLLHSGYFS 795 V G W +G +IG+G FG+V++G + TG+LIA++ + L AT L E+ LM+ HPNIV Y GAE+ +CI Q+WV GGS+ S+L FG F + V Y +QLL+G+ YLH+ I+HRD+KG N+L+ +GVVK+ADFGTSK+L ++ D Q ++GTPYFMAPEV+ RQ +G DIW+ V++M TGD PW +L + + +L + + + PP + L L LR+ L CF + RP+AK+LL + S Sbjct: 87 VQPGQWKIGQRIGQGKFGEVYVGLCEDTGQLIAIKIISLPGQTSELAT--LYREVDLMRSLRHPNIVSYFGAEVSEEECSLCIFQQWVPGGSVASLLKKFGPFREHVVRKYTKQLLKGLRYLHNNKIIHRDIKGANILVDVTGVVKLADFGTSKRL-EISDELMQETMAHGTMKGTPYFMAPEVIMRQKYGRKADIWSLGGAVMEMATGDPPWK-SLQMRNPI-ELFRFIHTHTHPPNIDFSLSLPLRLFLERCFIRNPKERPSAKALLKDRFVS 356 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|146327 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6979 ID=mRNA_6979|Name=jgi.p|Trimin1|146327|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=795bp|location=Sequence derived from alignment at Contig_27:910499..913260+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GTTCATCGGGGCAACTGGGTGCTGGGCTCACAGATTGGGAGGGGCGCCTTback to top protein sequence of jgi.p|Trimin1|146327 >Trimin1|146327|gw1.27.114.1 ID=Trimin1|146327|gw1.27.114.1|Name=jgi.p|Trimin1|146327|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=265bp VHRGNWVLGSQIGRGAFGQVHMGHNQVTGELIAVRRLCLVSDEKRAATSQback to top mRNA from alignment at Contig_27:910499..913260+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6979 ID=mRNA_6979|Name=jgi.p|Trimin1|146327|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2762bp|location=Sequence derived from alignment at Contig_27:910499..913260+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_27:910499..913260+ >mRNA_6979 ID=mRNA_6979|Name=jgi.p|Trimin1|146327|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=795bp|location=Sequence derived from alignment at Contig_27:910499..913260+ (Tribonema minus UTEX_B_3156 )back to top |